MS008672 (gene) Bitter gourd (TR) v1

Overview


Name	MS008672
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	DNA binding
Location	scaffold4: 2994418 .. 2995807 (+)
RNA-Seq Expression	MS008672
Synteny	MS008672

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGAGTTTCAGAACTCCGATCCAATTCTTTGGGGAGAAGCTCTCTCTTCTTATCCCTCCCAAATCGAAGCCCTAGGCAAGCCCAATTTGGTTTCTCTGGACCATTTCTACCGAAACGAACTCCCCAATCTTCTCCACAAACGTAACCCTAACCCTTACATCACTACTCCCGAGCTCTCCAAGCTCATGCAATGGAAGCTCACCCGTGGAAAATGGAGGTGATAGCTGCTCTATATCTCTTTCTCTTCATTCAGATTTCAACGATTTCACATCAATTTTATCGATAACGATTTTACGAATTTCAGGCCGCGTCTCTTGGACTTCGTTTCATCGTTGGACGAATCGCTCGTCAAATTGGCCTCTCAGAAGGCCTTCCAATGCCTTCCTGATATTTCCAAAGCCGTGTCTGAGCTTACGCCGCTCAAGGGCGTCGGTCCCGCCACTGCCTCGGCGGTTCTCGCTGCTTACGCGCCGGACGTTGCGCCTTTCATGTCGGATGAGGTGATATTAGGAGAAATTTTGATGCAATTCGATTAGATTAGTAGTAGTAACCATTGATTTCTGCAATTGGAGTTTTGAGTATTTGTTACACTTGGATATCTAACTTATGATGGTGAAGAAGTAGGCTATGGAGGCGGCCCTTGGCAACTCCAAGGATTATTCGTTGAAGCAGTACTTATCCTTCGCAAATACGTTGCAAGAGAAAGCCAAGGTATGTCAGAAAATACCATTATTAGCTATGTCTCTAATCAAGCCCCTTGTTTTCTGTATTATGTATGGAATGGAAGTTAAGTTCATAATGTTCATTATTGATTTCTTAGAGTCAGAACAACCGAGACTTATTTCTGTTCCATTCCTTTTAGTCTTTCTTTCTTGATATTGATTTGTGTTTTCTTTTACACTGTTTTGACTTATTGACCAACTTATCTTTGCAAATTGTTATAAGCTCAGGGCTGTAATGCGTTTTCAGATTCGGGTTTTAGAGTTTTTAGTTGTGTGATTTGTGCTTGGATTATGTAAACTATGTTTGATCTGTAGAAGTTAATATATAATATAGTACTTCATTAGCATGAATTTTTGTGTAAGATTTACATAGCGAATCTGAAACAACTCACCAAAACAAACTTGGAACTCATACTCAATTCTTAATTTTGAGTACATAAATAGTCAACTGTGGCTTAACCATTGGTATCGGTTTAGCATTTCCAACTATTTTAATGTGGGATGGTTTGGTCATCTGCAGGAATTGAGCTCAGACGGACAAATTTTCACACCATCTGATGTAGAGAGGGCTTTGTGGAGTTCAGCAACAGGGGAAAAATTGAAAGCTTCACAATCTCAATTAGAACCCAAGAATGGAAGTGGCGCTAAAAGAAAGAGAAAAACT

mRNA sequence

ATGGTGGAGTTTCAGAACTCCGATCCAATTCTTTGGGGAGAAGCTCTCTCTTCTTATCCCTCCCAAATCGAAGCCCTAGGCAAGCCCAATTTGGTTTCTCTGGACCATTTCTACCGAAACGAACTCCCCAATCTTCTCCACAAACGTAACCCTAACCCTTACATCACTACTCCCGAGCTCTCCAAGCTCATGCAATGGAAGCTCACCCGTGGAAAATGGAGGCCGCGTCTCTTGGACTTCGTTTCATCGTTGGACGAATCGCTCGTCAAATTGGCCTCTCAGAAGGCCTTCCAATGCCTTCCTGATATTTCCAAAGCCGTGTCTGAGCTTACGCCGCTCAAGGGCGTCGGTCCCGCCACTGCCTCGGCGGTTCTCGCTGCTTACGCGCCGGACGTTGCGCCTTTCATGTCGGATGAGGCTATGGAGGCGGCCCTTGGCAACTCCAAGGATTATTCGTTGAAGCAGTACTTATCCTTCGCAAATACGTTGCAAGAGAAAGCCAAGGAATTGAGCTCAGACGGACAAATTTTCACACCATCTGATGTAGAGAGGGCTTTGTGGAGTTCAGCAACAGGGGAAAAATTGAAAGCTTCACAATCTCAATTAGAACCCAAGAATGGAAGTGGCGCTAAAAGAAAGAGAAAAACT

Coding sequence (CDS)

ATGGTGGAGTTTCAGAACTCCGATCCAATTCTTTGGGGAGAAGCTCTCTCTTCTTATCCCTCCCAAATCGAAGCCCTAGGCAAGCCCAATTTGGTTTCTCTGGACCATTTCTACCGAAACGAACTCCCCAATCTTCTCCACAAACGTAACCCTAACCCTTACATCACTACTCCCGAGCTCTCCAAGCTCATGCAATGGAAGCTCACCCGTGGAAAATGGAGGCCGCGTCTCTTGGACTTCGTTTCATCGTTGGACGAATCGCTCGTCAAATTGGCCTCTCAGAAGGCCTTCCAATGCCTTCCTGATATTTCCAAAGCCGTGTCTGAGCTTACGCCGCTCAAGGGCGTCGGTCCCGCCACTGCCTCGGCGGTTCTCGCTGCTTACGCGCCGGACGTTGCGCCTTTCATGTCGGATGAGGCTATGGAGGCGGCCCTTGGCAACTCCAAGGATTATTCGTTGAAGCAGTACTTATCCTTCGCAAATACGTTGCAAGAGAAAGCCAAGGAATTGAGCTCAGACGGACAAATTTTCACACCATCTGATGTAGAGAGGGCTTTGTGGAGTTCAGCAACAGGGGAAAAATTGAAAGCTTCACAATCTCAATTAGAACCCAAGAATGGAAGTGGCGCTAAAAGAAAGAGAAAAACT

Protein sequence

MVEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPSDVERALWSSATGEKLKASQSQLEPKNGSGAKRKRKT

Homology

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BLAST of MS008672 vs. NCBI nr
Match: XP_022139314.1 (uncharacterized protein LOC111010256 [Momordica charantia])

HSP 1 Score: 421.4 bits (1082), Expect = 4.7e-114
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MVEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPEL 60
           MVEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPEL
Sbjct: 1   MVEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPEL 60

Query: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120
           SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT
Sbjct: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120

Query: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPS 180
           ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPS
Sbjct: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPS 180

Query: 181 DVERALWSSATGEKLKASQSQLEPKNGSGAKRKRKT 217
           DVERALWSSATGEKLKASQSQLEPKNGSGAKRKRKT
Sbjct: 181 DVERALWSSATGEKLKASQSQLEPKNGSGAKRKRKT 216

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BLAST of MS008672 vs. NCBI nr
Match: KAG6591445.1 (hypothetical protein SDJN03_13791, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 378.6 bits (971), Expect = 3.5e-101
Identity = 197/218 (90.37%), Postives = 206/218 (94.50%), Query Frame = 0


Query: 1   MVEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPEL 60
           MVEF +SDP LW EALSSYPSQIEALGKPNLVSLD FYRNELP LLHKRNP+PYITT EL
Sbjct: 1   MVEFSHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSEL 60

Query: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120
           SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT
Sbjct: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120

Query: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPS 180
           ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFA  LQ+KAKELSS+GQIFTPS
Sbjct: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFAKKLQDKAKELSSEGQIFTPS 180

Query: 181 DVERALWSSATGEKLKASQSQLEPKNG--SGAKRKRKT 217
           DVERALWS+A GEK+K SQSQL+PKNG  +G+KRKRKT
Sbjct: 181 DVERALWSTAIGEKVKGSQSQLDPKNGGKTGSKRKRKT 218

[Close]

BLAST of MS008672 vs. NCBI nr
Match: XP_022977105.1 (uncharacterized protein LOC111477273 [Cucurbita maxima])

HSP 1 Score: 376.7 bits (966), Expect = 1.3e-100
Identity = 196/218 (89.91%), Postives = 205/218 (94.04%), Query Frame = 0


Query: 1   MVEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPEL 60
           MVEF +SDP LW EALSSYPSQIEALGKPNLVSLD FYRNELP LLHKRNP+PYITT EL
Sbjct: 1   MVEFAHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSEL 60

Query: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120
           SKLMQWKLTRGKWRPRL DFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT
Sbjct: 61  SKLMQWKLTRGKWRPRLFDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120

Query: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPS 180
           ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYL+FA  LQ+KAKELSS+GQIFTPS
Sbjct: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLTFAKKLQDKAKELSSEGQIFTPS 180

Query: 181 DVERALWSSATGEKLKASQSQLEPKNG--SGAKRKRKT 217
           DVERALWS+A GEK+K SQSQL+PKNG  +GAKRKRKT
Sbjct: 181 DVERALWSTAIGEKVKGSQSQLDPKNGGKAGAKRKRKT 218

[Close]

BLAST of MS008672 vs. NCBI nr
Match: XP_023536029.1 (uncharacterized protein LOC111797290 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 376.3 bits (965), Expect = 1.7e-100
Identity = 196/218 (89.91%), Postives = 205/218 (94.04%), Query Frame = 0


Query: 1   MVEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPEL 60
           MVEF +S+P LW EAL SYPSQIEALGKPNLVSLD FYRNELP LLHKRNP+PYITT EL
Sbjct: 1   MVEFSHSEPGLWSEALCSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSEL 60

Query: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120
           SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT
Sbjct: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120

Query: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPS 180
           ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFA  LQ+KAKELSS+GQIFTPS
Sbjct: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFAKKLQDKAKELSSEGQIFTPS 180

Query: 181 DVERALWSSATGEKLKASQSQLEPKNG--SGAKRKRKT 217
           DVERALWS+A GEK+K SQSQL+PKNG  +GAKRKRKT
Sbjct: 181 DVERALWSTAIGEKVKGSQSQLDPKNGGKTGAKRKRKT 218

[Close]

BLAST of MS008672 vs. NCBI nr
Match: XP_022936826.1 (uncharacterized protein LOC111443296 [Cucurbita moschata])

HSP 1 Score: 369.8 bits (948), Expect = 1.6e-98
Identity = 193/217 (88.94%), Postives = 203/217 (93.55%), Query Frame = 0


Query: 2   VEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELS 61
           +EF +SDP LW EALSSYPS+IEALGKPNLVSLD FYRNELP LLHKRNP+PYITT ELS
Sbjct: 1   MEFSHSDPGLWSEALSSYPSRIEALGKPNLVSLDEFYRNELPPLLHKRNPSPYITTSELS 60

Query: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121
           KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA
Sbjct: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120

Query: 122 SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPSD 181
           SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFA  LQ+KAKELSS+GQIFTPSD
Sbjct: 121 SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFAKKLQDKAKELSSEGQIFTPSD 180

Query: 182 VERALWSSATGEKLKASQSQLEPKNG--SGAKRKRKT 217
           VERALWS+A GEK+K SQSQL  KNG  +G+KRKRKT
Sbjct: 181 VERALWSTAIGEKVKGSQSQLGSKNGGKTGSKRKRKT 217

[Close]

BLAST of MS008672 vs. ExPASy TrEMBL
Match: A0A6J1CCK9 (uncharacterized protein LOC111010256 OS=Momordica charantia OX=3673 GN=LOC111010256 PE=4 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 2.3e-114
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MVEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPEL 60
           MVEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPEL
Sbjct: 1   MVEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPEL 60

Query: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120
           SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT
Sbjct: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120

Query: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPS 180
           ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPS
Sbjct: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPS 180

Query: 181 DVERALWSSATGEKLKASQSQLEPKNGSGAKRKRKT 217
           DVERALWSSATGEKLKASQSQLEPKNGSGAKRKRKT
Sbjct: 181 DVERALWSSATGEKLKASQSQLEPKNGSGAKRKRKT 216

[Close]

BLAST of MS008672 vs. ExPASy TrEMBL
Match: A0A6J1ILC1 (uncharacterized protein LOC111477273 OS=Cucurbita maxima OX=3661 GN=LOC111477273 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 6.5e-101
Identity = 196/218 (89.91%), Postives = 205/218 (94.04%), Query Frame = 0


Query: 1   MVEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPEL 60
           MVEF +SDP LW EALSSYPSQIEALGKPNLVSLD FYRNELP LLHKRNP+PYITT EL
Sbjct: 1   MVEFAHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSEL 60

Query: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120
           SKLMQWKLTRGKWRPRL DFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT
Sbjct: 61  SKLMQWKLTRGKWRPRLFDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120

Query: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPS 180
           ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYL+FA  LQ+KAKELSS+GQIFTPS
Sbjct: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLTFAKKLQDKAKELSSEGQIFTPS 180

Query: 181 DVERALWSSATGEKLKASQSQLEPKNG--SGAKRKRKT 217
           DVERALWS+A GEK+K SQSQL+PKNG  +GAKRKRKT
Sbjct: 181 DVERALWSTAIGEKVKGSQSQLDPKNGGKAGAKRKRKT 218

[Close]

BLAST of MS008672 vs. ExPASy TrEMBL
Match: A0A6J1F8K0 (uncharacterized protein LOC111443296 OS=Cucurbita moschata OX=3662 GN=LOC111443296 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 7.9e-99
Identity = 193/217 (88.94%), Postives = 203/217 (93.55%), Query Frame = 0


Query: 2   VEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELS 61
           +EF +SDP LW EALSSYPS+IEALGKPNLVSLD FYRNELP LLHKRNP+PYITT ELS
Sbjct: 1   MEFSHSDPGLWSEALSSYPSRIEALGKPNLVSLDEFYRNELPPLLHKRNPSPYITTSELS 60

Query: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121
           KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA
Sbjct: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120

Query: 122 SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPSD 181
           SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFA  LQ+KAKELSS+GQIFTPSD
Sbjct: 121 SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFAKKLQDKAKELSSEGQIFTPSD 180

Query: 182 VERALWSSATGEKLKASQSQLEPKNG--SGAKRKRKT 217
           VERALWS+A GEK+K SQSQL  KNG  +G+KRKRKT
Sbjct: 181 VERALWSTAIGEKVKGSQSQLGSKNGGKTGSKRKRKT 217

[Close]

BLAST of MS008672 vs. ExPASy TrEMBL
Match: A0A1S3BUF7 (uncharacterized protein LOC103493629 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493629 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 7.4e-97
Identity = 189/217 (87.10%), Postives = 198/217 (91.24%), Query Frame = 0


Query: 2   VEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELS 61
           ++F NSDP LW EALSSY SQIEALGKPNLVSLD FYRNELP +LHKR P+PYITT ELS
Sbjct: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60

Query: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121
           KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA
Sbjct: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120

Query: 122 SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPSD 181
           SA+LAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYL FAN LQEKAKELS +G+ FTPSD
Sbjct: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSD 180

Query: 182 VERALWSSATGEKLKASQSQLEPKNG--SGAKRKRKT 217
           VERALWS A GEKLK SQSQL+P NG  +G KRKRKT
Sbjct: 181 VERALWSRAIGEKLKGSQSQLDPNNGGKTGTKRKRKT 217

[Close]

BLAST of MS008672 vs. ExPASy TrEMBL
Match: A0A0A0L3W6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G645280 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 9.6e-97
Identity = 189/218 (86.70%), Postives = 200/218 (91.74%), Query Frame = 0


Query: 1   MVEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPEL 60
           M+EF  SDP LW EALS+Y SQIEALGKPNLVSLD FYRNELP +LHKRNP+PYITT EL
Sbjct: 1   MMEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSEL 60

Query: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120
           SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT
Sbjct: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120

Query: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPS 180
           ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYL FAN L++KAKELS +G+IFTPS
Sbjct: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAKELSLEGEIFTPS 180

Query: 181 DVERALWSSATGEKLKASQSQLEPKNG--SGAKRKRKT 217
           DVERALWS A GEKLK S+SQL+P NG  +G KRKRKT
Sbjct: 181 DVERALWSRAIGEKLKGSKSQLDPNNGGKTGTKRKRKT 218

[Close]

BLAST of MS008672 vs. TAIR 10
Match: AT3G12210.2 (DNA binding )

HSP 1 Score: 277.3 bits (708), Expect = 1.0e-74
Identity = 152/213 (71.36%), Postives = 172/213 (80.75%), Query Frame = 0


Query: 2   VEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELS 61
           +EF+ SD  +W EALSSY S+IE+L KP LVSLD FYR +LP LLH R+PNPY+TT ELS
Sbjct: 3   LEFKCSDVGVWKEALSSYDSRIESLNKPELVSLDQFYRIKLPCLLHDRDPNPYLTTSELS 62

Query: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121
           +LM+WKL+RGKWRPRLLDFVSSLD+S+VK AS+KAF+ LPDISKAV ELT LKGVG ATA
Sbjct: 63  QLMKWKLSRGKWRPRLLDFVSSLDDSVVKSASEKAFKSLPDISKAVKELTVLKGVGAATA 122

Query: 122 SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPSD 181
           SAVLAAYAPD+APFMSDEAME ALGNSKDYSLKQYL FA  LQ+KAKEL   G+   PSD
Sbjct: 123 SAVLAAYAPDIAPFMSDEAMEVALGNSKDYSLKQYLLFATKLQDKAKELKLKGEWDGPSD 182

Query: 182 VERALWSSATGEKLKASQSQLEPKNGSGAKRKR 215
           +ERALWS     K     SQ E K+ SG KRKR
Sbjct: 183 IERALWSCTVRAK-----SQPE-KSSSGKKRKR 209

[Close]

BLAST of MS008672 vs. TAIR 10
Match: AT3G12210.1 (DNA binding )

HSP 1 Score: 208.8 bits (530), Expect = 4.5e-54
Identity = 105/138 (76.09%), Postives = 121/138 (87.68%), Query Frame = 0


Query: 2   VEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELS 61
           +EF+ SD  +W EALSSY S+IE+L KP LVSLD FYR +LP LLH R+PNPY+TT ELS
Sbjct: 3   LEFKCSDVGVWKEALSSYDSRIESLNKPELVSLDQFYRIKLPCLLHDRDPNPYLTTSELS 62

Query: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121
           +LM+WKL+RGKWRPRLLDFVSSLD+S+VK AS+KAF+ LPDISKAV ELT LKGVG ATA
Sbjct: 63  QLMKWKLSRGKWRPRLLDFVSSLDDSVVKSASEKAFKSLPDISKAVKELTVLKGVGAATA 122

Query: 122 SAVLAAYAPDVAPFMSDE 140
           SAVLAAYAPD+APFMSDE
Sbjct: 123 SAVLAAYAPDIAPFMSDE 140

The following BLAST results are available for this feature:

BLAST of MS008672 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139314.1	4.7e-114	100.00	uncharacterized protein LOC111010256 [Momordica charantia]	[more]
KAG6591445.1	3.5e-101	90.37	hypothetical protein SDJN03_13791, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022977105.1	1.3e-100	89.91	uncharacterized protein LOC111477273 [Cucurbita maxima]	[more]
XP_023536029.1	1.7e-100	89.91	uncharacterized protein LOC111797290 [Cucurbita pepo subsp. pepo]	[more]
XP_022936826.1	1.6e-98	88.94	uncharacterized protein LOC111443296 [Cucurbita moschata]	[more]

BLAST of MS008672 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS008672 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CCK9	2.3e-114	100.00	uncharacterized protein LOC111010256 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A6J1ILC1	6.5e-101	89.91	uncharacterized protein LOC111477273 OS=Cucurbita maxima OX=3661 GN=LOC111477273...	[more]
A0A6J1F8K0	7.9e-99	88.94	uncharacterized protein LOC111443296 OS=Cucurbita moschata OX=3662 GN=LOC1114432...	[more]
A0A1S3BUF7	7.4e-97	87.10	uncharacterized protein LOC103493629 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0L3W6	9.6e-97	86.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G645280 PE=4 SV=1	[more]

BLAST of MS008672 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12210.2	1.0e-74	71.36	DNA binding	[more]
AT3G12210.1	4.5e-54	76.09	DNA binding	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..216
None	No IPR available	PANTHER	PTHR21521	UNCHARACTERIZED	coord: 2..213

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS008672.1	MS008672.1	mRNA