MS008638 (gene) Bitter gourd (TR) v1

Overview


Name	MS008638
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	glutaredoxin-C6-like
Location	scaffold4: 2791115 .. 2791534 (+)
RNA-Seq Expression	MS008638
Synteny	MS008638

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGGGCTGAGACGCTGCTCCGCCGTCGACGTCGTCCATCTGGACCTGTCTCCGCCGCCCACGGCGGCCTCCGCCGCGTCCCTCTCCATCGACGTGGCCGAGTCCGCCGAGACGCGAATCCGGCGCCTGATTTCGGAGCACCCCGTGATAATCTTCAGCCGGAATTCGTGCTGCATGTGCCACGTCATGAAGAAGCTTCTCGCCACCATAGGGGTCCACCCCACCGTCATCGAATTGGATGACCACGAGATCGACGCGCTCGCCTCCTGCTCCTCCTCCTCCGCTCCGCCGTCTAATAATTCTGCTCCGGCGGTTTTCATCGGCGGCGCACTCGTCGGCGGCCTCGAATCCCTCGTCGCGCTCCACCTCAGCGGCCACCTCGTACCCAAGCTCGTCGAAGTCGGTGCTCTTTGGGTA

mRNA sequence

ATGCAAGGGCTGAGACGCTGCTCCGCCGTCGACGTCGTCCATCTGGACCTGTCTCCGCCGCCCACGGCGGCCTCCGCCGCGTCCCTCTCCATCGACGTGGCCGAGTCCGCCGAGACGCGAATCCGGCGCCTGATTTCGGAGCACCCCGTGATAATCTTCAGCCGGAATTCGTGCTGCATGTGCCACGTCATGAAGAAGCTTCTCGCCACCATAGGGGTCCACCCCACCGTCATCGAATTGGATGACCACGAGATCGACGCGCTCGCCTCCTGCTCCTCCTCCTCCGCTCCGCCGTCTAATAATTCTGCTCCGGCGGTTTTCATCGGCGGCGCACTCGTCGGCGGCCTCGAATCCCTCGTCGCGCTCCACCTCAGCGGCCACCTCGTACCCAAGCTCGTCGAAGTCGGTGCTCTTTGGGTA

Coding sequence (CDS)

ATGCAAGGGCTGAGACGCTGCTCCGCCGTCGACGTCGTCCATCTGGACCTGTCTCCGCCGCCCACGGCGGCCTCCGCCGCGTCCCTCTCCATCGACGTGGCCGAGTCCGCCGAGACGCGAATCCGGCGCCTGATTTCGGAGCACCCCGTGATAATCTTCAGCCGGAATTCGTGCTGCATGTGCCACGTCATGAAGAAGCTTCTCGCCACCATAGGGGTCCACCCCACCGTCATCGAATTGGATGACCACGAGATCGACGCGCTCGCCTCCTGCTCCTCCTCCTCCGCTCCGCCGTCTAATAATTCTGCTCCGGCGGTTTTCATCGGCGGCGCACTCGTCGGCGGCCTCGAATCCCTCGTCGCGCTCCACCTCAGCGGCCACCTCGTACCCAAGCTCGTCGAAGTCGGTGCTCTTTGGGTA

Protein sequence

MQGLRRCSAVDVVHLDLSPPPTAASAASLSIDVAESAETRIRRLISEHPVIIFSRNSCCMCHVMKKLLATIGVHPTVIELDDHEIDALASCSSSSAPPSNNSAPAVFIGGALVGGLESLVALHLSGHLVPKLVEVGALWV

Homology

[Close]

BLAST of MS008638 vs. NCBI nr
Match: XP_038899998.1 (glutaredoxin-C6-like [Benincasa hispida])

HSP 1 Score: 221.9 bits (564), Expect = 3.6e-54
Identity = 120/141 (85.11%), Postives = 126/141 (89.36%), Query Frame = 0


Query: 1   MQGLRRCSAVDVVHLDLS-PPPTAASAASLSIDVAESAETRIRRLISEHPVIIFSRNSCC 60
           MQGLRRCS  D++HLDLS PPPT  S ASLSIDVAESAETRIRRLISEHPVIIFSR SCC
Sbjct: 1   MQGLRRCSN-DLLHLDLSPPPPTTPSPASLSIDVAESAETRIRRLISEHPVIIFSRTSCC 60

Query: 61  MCHVMKKLLATIGVHPTVIELDDHEIDALASCSSSSAPPSNNSAPAVFIGGALVGGLESL 120
           MCHVMKKLLATIGVHPTVIELDD EIDAL+SCSS++ P    + PAVFIGGA VGGLESL
Sbjct: 61  MCHVMKKLLATIGVHPTVIELDDDEIDALSSCSSTTVPA---ATPAVFIGGAFVGGLESL 120

Query: 121 VALHLSGHLVPKLVEVGALWV 141
           VALHLSGHLVPKLVEVGALWV
Sbjct: 121 VALHLSGHLVPKLVEVGALWV 137

[Close]

BLAST of MS008638 vs. NCBI nr
Match: XP_022977144.1 (glutaredoxin-C6-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 218.4 bits (555), Expect = 3.9e-53
Identity = 115/140 (82.14%), Postives = 126/140 (90.00%), Query Frame = 0


Query: 1   MQGLRRCSAVDVVHLDLSPPPTAASAASLSIDVAESAETRIRRLISEHPVIIFSRNSCCM 60
           MQGLRRCS  D++HLDLSPPP + S+ SLSIDVAESAETRIRRLISEHPVIIFSR SCCM
Sbjct: 1   MQGLRRCSD-DLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCM 60

Query: 61  CHVMKKLLATIGVHPTVIELDDHEIDALASCSSSSAPPSNNSAPAVFIGGALVGGLESLV 120
           CHVMKKLLATIGV+PTVIELDD EIDALA+CS+S+   +  + PAVFIGGA VGGLESLV
Sbjct: 61  CHVMKKLLATIGVNPTVIELDDKEIDALATCSTST---TATTTPAVFIGGAFVGGLESLV 120

Query: 121 ALHLSGHLVPKLVEVGALWV 141
           ALHLSGHLVPKLVEVGALW+
Sbjct: 121 ALHLSGHLVPKLVEVGALWI 136

[Close]

BLAST of MS008638 vs. NCBI nr
Match: XP_022977143.1 (glutaredoxin-C6-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 217.6 bits (553), Expect = 6.7e-53
Identity = 115/139 (82.73%), Postives = 125/139 (89.93%), Query Frame = 0


Query: 1   MQGLRRCSAVDVVHLDLSPPPTAASAASLSIDVAESAETRIRRLISEHPVIIFSRNSCCM 60
           MQGLRRCS  D++HLDLSPPP + S+ SLSIDVAESAETRIRRLISEHPVIIFSR SCCM
Sbjct: 1   MQGLRRCSD-DLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCM 60

Query: 61  CHVMKKLLATIGVHPTVIELDDHEIDALASCSSSSAPPSNNSAPAVFIGGALVGGLESLV 120
           CHVMKKLLATIGV+PTVIELDD EIDALA+CS+S+   +  + PAVFIGGA VGGLESLV
Sbjct: 61  CHVMKKLLATIGVNPTVIELDDKEIDALATCSTST---TATTTPAVFIGGAFVGGLESLV 120

Query: 121 ALHLSGHLVPKLVEVGALW 140
           ALHLSGHLVPKLVEVGALW
Sbjct: 121 ALHLSGHLVPKLVEVGALW 135

[Close]

BLAST of MS008638 vs. NCBI nr
Match: XP_015884532.1 (glutaredoxin-C6-like [Ziziphus jujuba])

HSP 1 Score: 216.1 bits (549), Expect = 2.0e-52
Identity = 118/143 (82.52%), Postives = 126/143 (88.11%), Query Frame = 0


Query: 1   MQGLRRCSAVDVVHLDLSPPPTA-ASAASLSIDVAESAETRIRRLISEHPVIIFSRNSCC 60
           MQGLRRCS  DVVH+DL P P A  +A+SLSIDVAESAETRIRRLISEHPVIIFSRNSCC
Sbjct: 1   MQGLRRCSN-DVVHVDLPPAPAATTTASSLSIDVAESAETRIRRLISEHPVIIFSRNSCC 60

Query: 61  MCHVMKKLLATIGVHPTVIELDDHEIDALASCSSS--SAPPSNNSAPAVFIGGALVGGLE 120
           MCHVMKKLLATIGVHPTVIELDDHEI AL SCS +  ++    +SAPAVFIGG+ VGGLE
Sbjct: 61  MCHVMKKLLATIGVHPTVIELDDHEIAALPSCSPAHDNSDHPRHSAPAVFIGGSCVGGLE 120

Query: 121 SLVALHLSGHLVPKLVEVGALWV 141
           SLVALHLSGHLVPKLVEVGALWV
Sbjct: 121 SLVALHLSGHLVPKLVEVGALWV 142

[Close]

BLAST of MS008638 vs. NCBI nr
Match: XP_022935887.1 (glutaredoxin-C6-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 216.1 bits (549), Expect = 2.0e-52
Identity = 114/140 (81.43%), Postives = 126/140 (90.00%), Query Frame = 0


Query: 1   MQGLRRCSAVDVVHLDLSPPPTAASAASLSIDVAESAETRIRRLISEHPVIIFSRNSCCM 60
           MQGLRRCS  D++HLDLSPPP + S+ SLSIDVAESAETRIRRLISEHPVIIFSR SCCM
Sbjct: 1   MQGLRRCSD-DLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCM 60

Query: 61  CHVMKKLLATIGVHPTVIELDDHEIDALASCSSSSAPPSNNSAPAVFIGGALVGGLESLV 120
           CHVMKKLLATIGV+PTVIELDD EIDALA+ S+S+   ++ + PAVFIGGA VGGLESLV
Sbjct: 61  CHVMKKLLATIGVNPTVIELDDEEIDALATYSTSTT--ASTTTPAVFIGGAFVGGLESLV 120

Query: 121 ALHLSGHLVPKLVEVGALWV 141
           ALHLSGHLVPKLVEVGALW+
Sbjct: 121 ALHLSGHLVPKLVEVGALWI 137

[Close]

BLAST of MS008638 vs. ExPASy Swiss-Prot
Match: Q8L9S3 (Glutaredoxin-C6 OS=Arabidopsis thaliana OX=3702 GN=GRXC6 PE=2 SV=2)

HSP 1 Score: 166.4 bits (420), Expect = 2.3e-40
Identity = 96/141 (68.09%), Postives = 107/141 (75.89%), Query Frame = 0


Query: 3   GLRRCSAVDVVHLDLSPPPTAASAASLSIDVAESAETRIRRLISEHPVIIFSRNSCCMCH 62
           GL+R S  DVV LDL+ PP+  S+ SLSID  ES E +IRRLISEHPVIIFSR+SCCMCH
Sbjct: 6   GLQRFSN-DVVRLDLT-PPSQTSSTSLSIDEEESTEAKIRRLISEHPVIIFSRSSCCMCH 65

Query: 63  VMKKLLATIGVHPTVIELDDHEIDALASC---SSSSAPPSNNSAPAVFIGGALVGGLESL 122
           VMK+LLATIGV PTVIELDDHE+ +L +      S         PAVFIG   VGGLESL
Sbjct: 66  VMKRLLATIGVIPTVIELDDHEVSSLPTALQDEYSGGVSVVGPPPAVFIGRECVGGLESL 125

Query: 123 VALHLSGHLVPKLVEVGALWV 141
           VALHLSG LVPKLV+VGALWV
Sbjct: 126 VALHLSGQLVPKLVQVGALWV 144

[Close]

BLAST of MS008638 vs. ExPASy Swiss-Prot
Match: Q29PZ1 (Glutaredoxin-C10 OS=Arabidopsis thaliana OX=3702 GN=GRXC10 PE=2 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 4.5e-36
Identity = 89/155 (57.42%), Postives = 108/155 (69.68%), Query Frame = 0


Query: 1   MQGLRRCSAVDVVHLDLS---------PPP------TAASAASLSIDVAESAETRIRRLI 60
           M+GLR CS  D V LDL+         PPP      ++ ++ SLS D  E++E++I RLI
Sbjct: 4   MRGLRNCSN-DAVTLDLTVHPPPPPPLPPPAPSTVSSSTASTSLSFDEEETSESKIGRLI 63

Query: 61  SEHPVIIFSR-NSCCMCHVMKKLLATIGVHPTVIELDDHEIDALASCSSSSAPPSNNSAP 120
           SEHPVIIF+R +SCCMCHVMKKLL+T+GVHPTVIE+DD EI  LA            +AP
Sbjct: 64  SEHPVIIFTRFSSCCMCHVMKKLLSTVGVHPTVIEIDDGEIAYLAV----------EAAP 123

Query: 121 AVFIGGALVGGLESLVALHLSGHLVPKLVEVGALW 140
            +FIGG  VGG ESLVALHLSG L+P+LVEVGALW
Sbjct: 124 VLFIGGTCVGGFESLVALHLSGQLIPRLVEVGALW 147

[Close]

BLAST of MS008638 vs. ExPASy Swiss-Prot
Match: Q0DK35 (Glutaredoxin-C7 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC7 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.3e-24
Identity = 58/104 (55.77%), Postives = 75/104 (72.12%), Query Frame = 0


Query: 35  ESAETRIRRLISEHPVIIFSRNSCCMCHVMKKLLATIGVHPTVIELDDHEIDALASCSSS 94
           E    RI RL+ E PV+IF+R  CCMCHVM++LLA +G H TVIELD+   +A AS +++
Sbjct: 39  EQPAERIGRLVRESPVVIFARRGCCMCHVMRRLLAAVGAHATVIELDEAAEEAAASAAAA 98

Query: 95  SAPPSNNSAPAVFIGGALVGGLESLVALHLSGHLVPKLVEVGAL 139
           +A       PA+F+GGA VGGL+ L+ LHLSG LVP+L EVGAL
Sbjct: 99  AA------VPALFVGGAPVGGLDGLMGLHLSGRLVPRLREVGAL 136

[Close]

BLAST of MS008638 vs. ExPASy Swiss-Prot
Match: Q5SMY5 (Monothiol glutaredoxin-S2 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS2 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.3e-19
Identity = 56/114 (49.12%), Postives = 74/114 (64.91%), Query Frame = 0


Query: 28  SLSIDVA---ESAETRIRRLISEHPVIIFSRNSCCMCHVMKKLLATIGVHPTVIELDDHE 87
           SL+ID A   E+   R+ RL+ E PV++F+R  C M HVM++LLA +G H TVIEL+   
Sbjct: 15  SLTIDPAGEEEAPAERVGRLVRESPVVVFARRGCYMAHVMRRLLAAVGAHATVIELEGG- 74

Query: 88  IDALASCSSSSAPPSNNSAPAVFIGGALVGGLESLVALHLSGHLVPKLVEVGAL 139
               A+    +A     + PA+F+GG  VGGLE L+ LHLSG LVP+L EVGAL
Sbjct: 75  ----AAEEEEAALGGGAALPALFVGGDPVGGLEGLMGLHLSGRLVPRLREVGAL 123

[Close]

BLAST of MS008638 vs. ExPASy Swiss-Prot
Match: Q6K609 (Glutaredoxin-C3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC3 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.9e-19
Identity = 55/121 (45.45%), Postives = 75/121 (61.98%), Query Frame = 0


Query: 27  ASLSIDVAESAETRIRRLISEHPVIIFSRNSCCMCHVMKKLLATIGVHPTVIELD----D 86
           A+    + ESA  R+ RL SE  V++FS +SCCMCH +K+L   +GVHPTV ELD     
Sbjct: 15  AAAPAPMVESAVARVERLASESAVVVFSVSSCCMCHAVKRLFCGMGVHPTVHELDLDPRG 74

Query: 87  HEID-ALASCSSSSAPPSNNS--APAVFIGGALVGGLESLVALHLSGHLVPKLVEVGALW 141
            E++ ALA       P + +    P VFIGG LVG ++ ++A H++G LVP L E GALW
Sbjct: 75  RELERALARLVGYGGPAAASPPVVPVVFIGGKLVGAMDRVMAAHINGSLVPLLKEAGALW 134

[Close]

BLAST of MS008638 vs. ExPASy TrEMBL
Match: A0A6J1IQM0 (glutaredoxin-C6-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111477298 PE=3 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.9e-53
Identity = 115/140 (82.14%), Postives = 126/140 (90.00%), Query Frame = 0


Query: 1   MQGLRRCSAVDVVHLDLSPPPTAASAASLSIDVAESAETRIRRLISEHPVIIFSRNSCCM 60
           MQGLRRCS  D++HLDLSPPP + S+ SLSIDVAESAETRIRRLISEHPVIIFSR SCCM
Sbjct: 1   MQGLRRCSD-DLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCM 60

Query: 61  CHVMKKLLATIGVHPTVIELDDHEIDALASCSSSSAPPSNNSAPAVFIGGALVGGLESLV 120
           CHVMKKLLATIGV+PTVIELDD EIDALA+CS+S+   +  + PAVFIGGA VGGLESLV
Sbjct: 61  CHVMKKLLATIGVNPTVIELDDKEIDALATCSTST---TATTTPAVFIGGAFVGGLESLV 120

Query: 121 ALHLSGHLVPKLVEVGALWV 141
           ALHLSGHLVPKLVEVGALW+
Sbjct: 121 ALHLSGHLVPKLVEVGALWI 136

[Close]

BLAST of MS008638 vs. ExPASy TrEMBL
Match: A0A6J1IP53 (glutaredoxin-C6-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477298 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 3.2e-53
Identity = 115/139 (82.73%), Postives = 125/139 (89.93%), Query Frame = 0


Query: 1   MQGLRRCSAVDVVHLDLSPPPTAASAASLSIDVAESAETRIRRLISEHPVIIFSRNSCCM 60
           MQGLRRCS  D++HLDLSPPP + S+ SLSIDVAESAETRIRRLISEHPVIIFSR SCCM
Sbjct: 1   MQGLRRCSD-DLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCM 60

Query: 61  CHVMKKLLATIGVHPTVIELDDHEIDALASCSSSSAPPSNNSAPAVFIGGALVGGLESLV 120
           CHVMKKLLATIGV+PTVIELDD EIDALA+CS+S+   +  + PAVFIGGA VGGLESLV
Sbjct: 61  CHVMKKLLATIGVNPTVIELDDKEIDALATCSTST---TATTTPAVFIGGAFVGGLESLV 120

Query: 121 ALHLSGHLVPKLVEVGALW 140
           ALHLSGHLVPKLVEVGALW
Sbjct: 121 ALHLSGHLVPKLVEVGALW 135

[Close]

BLAST of MS008638 vs. ExPASy TrEMBL
Match: A0A6P3ZW29 (glutaredoxin-C6-like OS=Ziziphus jujuba OX=326968 GN=LOC107420156 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 9.4e-53
Identity = 118/143 (82.52%), Postives = 126/143 (88.11%), Query Frame = 0


Query: 1   MQGLRRCSAVDVVHLDLSPPPTA-ASAASLSIDVAESAETRIRRLISEHPVIIFSRNSCC 60
           MQGLRRCS  DVVH+DL P P A  +A+SLSIDVAESAETRIRRLISEHPVIIFSRNSCC
Sbjct: 1   MQGLRRCSN-DVVHVDLPPAPAATTTASSLSIDVAESAETRIRRLISEHPVIIFSRNSCC 60

Query: 61  MCHVMKKLLATIGVHPTVIELDDHEIDALASCSSS--SAPPSNNSAPAVFIGGALVGGLE 120
           MCHVMKKLLATIGVHPTVIELDDHEI AL SCS +  ++    +SAPAVFIGG+ VGGLE
Sbjct: 61  MCHVMKKLLATIGVHPTVIELDDHEIAALPSCSPAHDNSDHPRHSAPAVFIGGSCVGGLE 120

Query: 121 SLVALHLSGHLVPKLVEVGALWV 141
           SLVALHLSGHLVPKLVEVGALWV
Sbjct: 121 SLVALHLSGHLVPKLVEVGALWV 142

[Close]

BLAST of MS008638 vs. ExPASy TrEMBL
Match: A0A6J1F6V2 (glutaredoxin-C6-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111442656 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 9.4e-53
Identity = 114/140 (81.43%), Postives = 126/140 (90.00%), Query Frame = 0


Query: 1   MQGLRRCSAVDVVHLDLSPPPTAASAASLSIDVAESAETRIRRLISEHPVIIFSRNSCCM 60
           MQGLRRCS  D++HLDLSPPP + S+ SLSIDVAESAETRIRRLISEHPVIIFSR SCCM
Sbjct: 1   MQGLRRCSD-DLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCM 60

Query: 61  CHVMKKLLATIGVHPTVIELDDHEIDALASCSSSSAPPSNNSAPAVFIGGALVGGLESLV 120
           CHVMKKLLATIGV+PTVIELDD EIDALA+ S+S+   ++ + PAVFIGGA VGGLESLV
Sbjct: 61  CHVMKKLLATIGVNPTVIELDDEEIDALATYSTSTT--ASTTTPAVFIGGAFVGGLESLV 120

Query: 121 ALHLSGHLVPKLVEVGALWV 141
           ALHLSGHLVPKLVEVGALW+
Sbjct: 121 ALHLSGHLVPKLVEVGALWI 137

[Close]

BLAST of MS008638 vs. ExPASy TrEMBL
Match: A0A6J1F5Z5 (glutaredoxin-C6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442656 PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.6e-52
Identity = 114/139 (82.01%), Postives = 125/139 (89.93%), Query Frame = 0


Query: 1   MQGLRRCSAVDVVHLDLSPPPTAASAASLSIDVAESAETRIRRLISEHPVIIFSRNSCCM 60
           MQGLRRCS  D++HLDLSPPP + S+ SLSIDVAESAETRIRRLISEHPVIIFSR SCCM
Sbjct: 1   MQGLRRCSD-DLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCM 60

Query: 61  CHVMKKLLATIGVHPTVIELDDHEIDALASCSSSSAPPSNNSAPAVFIGGALVGGLESLV 120
           CHVMKKLLATIGV+PTVIELDD EIDALA+ S+S+   ++ + PAVFIGGA VGGLESLV
Sbjct: 61  CHVMKKLLATIGVNPTVIELDDEEIDALATYSTSTT--ASTTTPAVFIGGAFVGGLESLV 120

Query: 121 ALHLSGHLVPKLVEVGALW 140
           ALHLSGHLVPKLVEVGALW
Sbjct: 121 ALHLSGHLVPKLVEVGALW 136

[Close]

BLAST of MS008638 vs. TAIR 10
Match: AT4G33040.1 (Thioredoxin superfamily protein )

HSP 1 Score: 166.4 bits (420), Expect = 1.7e-41
Identity = 96/141 (68.09%), Postives = 107/141 (75.89%), Query Frame = 0


Query: 3   GLRRCSAVDVVHLDLSPPPTAASAASLSIDVAESAETRIRRLISEHPVIIFSRNSCCMCH 62
           GL+R S  DVV LDL+ PP+  S+ SLSID  ES E +IRRLISEHPVIIFSR+SCCMCH
Sbjct: 6   GLQRFSN-DVVRLDLT-PPSQTSSTSLSIDEEESTEAKIRRLISEHPVIIFSRSSCCMCH 65

Query: 63  VMKKLLATIGVHPTVIELDDHEIDALASC---SSSSAPPSNNSAPAVFIGGALVGGLESL 122
           VMK+LLATIGV PTVIELDDHE+ +L +      S         PAVFIG   VGGLESL
Sbjct: 66  VMKRLLATIGVIPTVIELDDHEVSSLPTALQDEYSGGVSVVGPPPAVFIGRECVGGLESL 125

Query: 123 VALHLSGHLVPKLVEVGALWV 141
           VALHLSG LVPKLV+VGALWV
Sbjct: 126 VALHLSGQLVPKLVQVGALWV 144

[Close]

BLAST of MS008638 vs. TAIR 10
Match: AT5G11930.1 (Thioredoxin superfamily protein )

HSP 1 Score: 152.1 bits (383), Expect = 3.2e-37
Identity = 89/155 (57.42%), Postives = 108/155 (69.68%), Query Frame = 0


Query: 1   MQGLRRCSAVDVVHLDLS---------PPP------TAASAASLSIDVAESAETRIRRLI 60
           M+GLR CS  D V LDL+         PPP      ++ ++ SLS D  E++E++I RLI
Sbjct: 4   MRGLRNCSN-DAVTLDLTVHPPPPPPLPPPAPSTVSSSTASTSLSFDEEETSESKIGRLI 63

Query: 61  SEHPVIIFSR-NSCCMCHVMKKLLATIGVHPTVIELDDHEIDALASCSSSSAPPSNNSAP 120
           SEHPVIIF+R +SCCMCHVMKKLL+T+GVHPTVIE+DD EI  LA            +AP
Sbjct: 64  SEHPVIIFTRFSSCCMCHVMKKLLSTVGVHPTVIEIDDGEIAYLAV----------EAAP 123

Query: 121 AVFIGGALVGGLESLVALHLSGHLVPKLVEVGALW 140
            +FIGG  VGG ESLVALHLSG L+P+LVEVGALW
Sbjct: 124 VLFIGGTCVGGFESLVALHLSGQLIPRLVEVGALW 147

[Close]

BLAST of MS008638 vs. TAIR 10
Match: AT1G28480.1 (Thioredoxin superfamily protein )

HSP 1 Score: 92.4 bits (228), Expect = 3.0e-19
Identity = 49/119 (41.18%), Postives = 73/119 (61.34%), Query Frame = 0


Query: 25  SAASLSIDVAESAETRIRRLISEHPVIIFSRNSCCMCHVMKKLLATIGVHPTVIELDDHE 84
           S   LS+    + E R+R ++ E+ VI+  R  CCMCHV+++LL  +GV+P V+E+D+  
Sbjct: 20  SLRPLSLKTQGNGE-RVRMVVEENAVIVIGRRGCCMCHVVRRLLLGLGVNPAVLEIDEER 79

Query: 85  IDALASCSSSSAPPSNNSA---PAVFIGGALVGGLESLVALHLSGHLVPKLVEVGALWV 141
            D + S   +            PAV++GG L GGL+ ++A H+SG LVP L EVGALW+
Sbjct: 80  EDEVLSELENIGVQGGGGTVKLPAVYVGGRLFGGLDRVMATHISGELVPILKEVGALWL 137

[Close]

BLAST of MS008638 vs. TAIR 10
Match: AT3G02000.1 (Thioredoxin superfamily protein )

HSP 1 Score: 92.0 bits (227), Expect = 4.0e-19
Identity = 53/116 (45.69%), Postives = 70/116 (60.34%), Query Frame = 0


Query: 33  VAESAETRIRRLISEHPVIIFSRNSCCMCHVMKKLLATIGVHPTVIELDDH--------E 92
           VA++   RI  L SE  V+IFS ++CCMCH +K L   +GV P V ELD H         
Sbjct: 24  VADTGLLRIESLASESAVVIFSVSTCCMCHAVKGLFRGMGVSPAVHELDLHPYGGDIQRA 83

Query: 93  IDALASCSSSSAPPSNNSAPAVFIGGALVGGLESLVALHLSGHLVPKLVEVGALWV 141
           +  L  CS SS+P    S P VFIGG LVG ++ ++A H++G LVP L + GALW+
Sbjct: 84  LIRLLGCSGSSSP---GSLPVVFIGGKLVGAMDRVMASHINGSLVPLLKDAGALWL 136

[Close]

BLAST of MS008638 vs. TAIR 10
Match: AT4G15680.1 (Thioredoxin superfamily protein )

HSP 1 Score: 88.2 bits (217), Expect = 5.7e-18
Identity = 50/106 (47.17%), Postives = 68/106 (64.15%), Query Frame = 0


Query: 40  RIRRLISEHPVIIFSRNSCCMCHVMKKLLATIGVHPTVIELDD----HEID-ALASCSSS 99
           +++++ISE  V+IFS+NSCCM H +K L    GV+PT+ ELD+     EI+ ALA    S
Sbjct: 3   KLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQLGCS 62

Query: 100 SAPPSNNSAPAVFIGGALVGGLESLVALHLSGHLVPKLVEVGALWV 141
                  + P VFIGG LVGG   +++LHL+  LVP L  VGALW+
Sbjct: 63  P------TVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102

The following BLAST results are available for this feature:

BLAST of MS008638 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899998.1	3.6e-54	85.11	glutaredoxin-C6-like [Benincasa hispida]	[more]
XP_022977144.1	3.9e-53	82.14	glutaredoxin-C6-like isoform X2 [Cucurbita maxima]	[more]
XP_022977143.1	6.7e-53	82.73	glutaredoxin-C6-like isoform X1 [Cucurbita maxima]	[more]
XP_015884532.1	2.0e-52	82.52	glutaredoxin-C6-like [Ziziphus jujuba]	[more]
XP_022935887.1	2.0e-52	81.43	glutaredoxin-C6-like isoform X2 [Cucurbita moschata]	[more]

BLAST of MS008638 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9S3	2.3e-40	68.09	Glutaredoxin-C6 OS=Arabidopsis thaliana OX=3702 GN=GRXC6 PE=2 SV=2	[more]
Q29PZ1	4.5e-36	57.42	Glutaredoxin-C10 OS=Arabidopsis thaliana OX=3702 GN=GRXC10 PE=2 SV=1	[more]
Q0DK35	2.3e-24	55.77	Glutaredoxin-C7 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC7 PE=3 SV=1	[more]
Q5SMY5	2.3e-19	49.12	Monothiol glutaredoxin-S2 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS2 PE=2...	[more]
Q6K609	3.9e-19	45.45	Glutaredoxin-C3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC3 PE=2 SV=1	[more]

BLAST of MS008638 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IQM0	1.9e-53	82.14	glutaredoxin-C6-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111477298 PE=3...	[more]
A0A6J1IP53	3.2e-53	82.73	glutaredoxin-C6-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477298 PE=3...	[more]
A0A6P3ZW29	9.4e-53	82.52	glutaredoxin-C6-like OS=Ziziphus jujuba OX=326968 GN=LOC107420156 PE=3 SV=1	[more]
A0A6J1F6V2	9.4e-53	81.43	glutaredoxin-C6-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111442656 PE...	[more]
A0A6J1F5Z5	1.6e-52	82.01	glutaredoxin-C6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442656 PE...	[more]

BLAST of MS008638 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33040.1	1.7e-41	68.09	Thioredoxin superfamily protein	[more]
AT5G11930.1	3.2e-37	57.42	Thioredoxin superfamily protein	[more]
AT1G28480.1	3.0e-19	41.18	Thioredoxin superfamily protein	[more]
AT3G02000.1	4.0e-19	45.69	Thioredoxin superfamily protein	[more]
AT4G15680.1	5.7e-18	47.17	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 96..109 score: 26.49 coord: 50..68 score: 33.99 coord: 110..123 score: 31.25
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 41..140 e-value: 6.1E-37 score: 123.6
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 8..139
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 31..139 e-value: 1.8E-25 score: 90.8
None	No IPR available	PANTHER	PTHR10168:SF56	GLUTAREDOXIN-C6	coord: 8..139
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 38..139 score: 19.959366
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 50..113 e-value: 3.5E-9 score: 36.8
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 39..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS008638.1	MS008638.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0097573	glutathione oxidoreductase activity