MS008601 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCGAGGGTGACGAAGGCGATCTCCGGGATCGAGCCGCCGGCTCCGGCGACGCAGCACGGCGCTCAAGTCATCGACGTGGAGTCCGTGAAATGCGAGTGCTGTGGATTGACGGAGGAGTGCACTCCGGCGTACATCGGTCGTGTTCGGGAGAGGTACGACGGCAGTTGGATTTGCGGGCTCTGTTCGGAGGCGGTGAAGGACGAGTCTCTCAGATCTCAGGGGAACATCACCACCGGCGAAGCCGTGAAGAGGCACATGAAGTTCCACAAACAGTTCAAATCTTCGAATCCGCCGGCGAATCCTACTGAGGATTTGATTTCGGCAATGAAACAGCTTCTCCGGCGGTCGCTCGATTCTCCGAAGAACGACGCCTCGCGATCGCTAAGCCGTTCGAGTAGCTGTTTCTCCGCCATGCCAGGGCGGCGGAGCCATTACGAT ATGGCGGCGAGGGTGACGAAGGCGATCTCCGGGATCGAGCCGCCGGCTCCGGCGACGCAGCACGGCGCTCAAGTCATCGACGTGGAGTCCGTGAAATGCGAGTGCTGTGGATTGACGGAGGAGTGCACTCCGGCGTACATCGGTCGTGTTCGGGAGAGGTACGACGGCAGTTGGATTTGCGGGCTCTGTTCGGAGGCGGTGAAGGACGAGTCTCTCAGATCTCAGGGGAACATCACCACCGGCGAAGCCGTGAAGAGGCACATGAAGTTCCACAAACAGTTCAAATCTTCGAATCCGCCGGCGAATCCTACTGAGGATTTGATTTCGGCAATGAAACAGCTTCTCCGGCGGTCGCTCGATTCTCCGAAGAACGACGCCTCGCGATCGCTAAGCCGTTCGAGTAGCTGTTTCTCCGCCATGCCAGGGCGGCGGAGCCATTACGAT ATGGCGGCGAGGGTGACGAAGGCGATCTCCGGGATCGAGCCGCCGGCTCCGGCGACGCAGCACGGCGCTCAAGTCATCGACGTGGAGTCCGTGAAATGCGAGTGCTGTGGATTGACGGAGGAGTGCACTCCGGCGTACATCGGTCGTGTTCGGGAGAGGTACGACGGCAGTTGGATTTGCGGGCTCTGTTCGGAGGCGGTGAAGGACGAGTCTCTCAGATCTCAGGGGAACATCACCACCGGCGAAGCCGTGAAGAGGCACATGAAGTTCCACAAACAGTTCAAATCTTCGAATCCGCCGGCGAATCCTACTGAGGATTTGATTTCGGCAATGAAACAGCTTCTCCGGCGGTCGCTCGATTCTCCGAAGAACGACGCCTCGCGATCGCTAAGCCGTTCGAGTAGCTGTTTCTCCGCCATGCCAGGGCGGCGGAGCCATTACGAT MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPPANPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD Homology
BLAST of MS008601 vs. NCBI nr
Match: XP_022159335.1 (uncharacterized protein LOC111025749 [Momordica charantia]) HSP 1 Score: 291.2 bits (744), Expect = 5.0e-75 Identity = 143/148 (96.62%), Postives = 144/148 (97.30%), Query Frame = 0
BLAST of MS008601 vs. NCBI nr
Match: XP_023536550.1 (uncharacterized protein LOC111797685 [Cucurbita pepo subsp. pepo] >XP_023536551.1 uncharacterized protein LOC111797685 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 270.0 bits (689), Expect = 1.2e-68 Identity = 133/148 (89.86%), Postives = 136/148 (91.89%), Query Frame = 0
BLAST of MS008601 vs. NCBI nr
Match: KAG6591497.1 (hypothetical protein SDJN03_13843, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024382.1 hypothetical protein SDJN02_13196, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 267.7 bits (683), Expect = 6.0e-68 Identity = 131/148 (88.51%), Postives = 136/148 (91.89%), Query Frame = 0
BLAST of MS008601 vs. NCBI nr
Match: XP_022977134.1 (uncharacterized protein LOC111477296 [Cucurbita maxima] >XP_022977135.1 uncharacterized protein LOC111477296 [Cucurbita maxima] >XP_022977136.1 uncharacterized protein LOC111477296 [Cucurbita maxima]) HSP 1 Score: 266.2 bits (679), Expect = 1.7e-67 Identity = 132/148 (89.19%), Postives = 136/148 (91.89%), Query Frame = 0
BLAST of MS008601 vs. NCBI nr
Match: XP_022936502.1 (uncharacterized protein LOC111443099 [Cucurbita moschata] >XP_022936504.1 uncharacterized protein LOC111443099 [Cucurbita moschata] >XP_022936505.1 uncharacterized protein LOC111443099 [Cucurbita moschata]) HSP 1 Score: 266.2 bits (679), Expect = 1.7e-67 Identity = 130/148 (87.84%), Postives = 136/148 (91.89%), Query Frame = 0
BLAST of MS008601 vs. ExPASy TrEMBL
Match: A0A6J1DYE7 (uncharacterized protein LOC111025749 OS=Momordica charantia OX=3673 GN=LOC111025749 PE=4 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 2.4e-75 Identity = 143/148 (96.62%), Postives = 144/148 (97.30%), Query Frame = 0
BLAST of MS008601 vs. ExPASy TrEMBL
Match: A0A6J1IIZ6 (uncharacterized protein LOC111477296 OS=Cucurbita maxima OX=3661 GN=LOC111477296 PE=4 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 8.4e-68 Identity = 132/148 (89.19%), Postives = 136/148 (91.89%), Query Frame = 0
BLAST of MS008601 vs. ExPASy TrEMBL
Match: A0A6J1FDW1 (uncharacterized protein LOC111443099 OS=Cucurbita moschata OX=3662 GN=LOC111443099 PE=4 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 8.4e-68 Identity = 130/148 (87.84%), Postives = 136/148 (91.89%), Query Frame = 0
BLAST of MS008601 vs. ExPASy TrEMBL
Match: A0A6J1J3W6 (uncharacterized protein LOC111481029 OS=Cucurbita maxima OX=3661 GN=LOC111481029 PE=4 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 1.3e-63 Identity = 122/148 (82.43%), Postives = 130/148 (87.84%), Query Frame = 0
BLAST of MS008601 vs. ExPASy TrEMBL
Match: A0A0A0L0X0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G648590 PE=4 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 3.1e-62 Identity = 121/140 (86.43%), Postives = 126/140 (90.00%), Query Frame = 0
BLAST of MS008601 vs. TAIR 10
Match: AT1G72510.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 136.3 bits (342), Expect = 1.9e-32 Identity = 72/130 (55.38%), Postives = 89/130 (68.46%), Query Frame = 0
BLAST of MS008601 vs. TAIR 10
Match: AT1G72510.2 (Protein of unknown function (DUF1677) ) HSP 1 Score: 136.3 bits (342), Expect = 1.9e-32 Identity = 72/130 (55.38%), Postives = 89/130 (68.46%), Query Frame = 0
BLAST of MS008601 vs. TAIR 10
Match: AT2G09970.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 120.2 bits (300), Expect = 1.4e-27 Identity = 69/143 (48.25%), Postives = 91/143 (63.64%), Query Frame = 0
BLAST of MS008601 vs. TAIR 10
Match: AT5G20670.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 113.2 bits (282), Expect = 1.8e-25 Identity = 63/140 (45.00%), Postives = 87/140 (62.14%), Query Frame = 0
BLAST of MS008601 vs. TAIR 10
Match: AT3G22540.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 94.4 bits (233), Expect = 8.4e-20 Identity = 48/111 (43.24%), Postives = 69/111 (62.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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