MS008579 (gene) Bitter gourd (TR) v1

Overview


Name	MS008579
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	VQ motif-containing protein 4-like
Location	scaffold4: 2350962 .. 2351513 (-)
RNA-Seq Expression	MS008579
Synteny	MS008579

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGCCGCCACCGCCGCCGCCGTCGCTAACTTCTCCGACCACCTTCGTCCAAGCAGACACAAACTCCTTCCGGGACCTTGTCCAAAAGCTCACCGGCTTTTCCGGTGACTCCGAGAAACTGCCGGTCACTCACCTCTCAAAGCTTTCCTGCTCGAAGCCCTCTCCTCCGGCCGCCGACCACCTCACCGGCCCTCGCCGGTCTCCGTTCAAGCTCCAAGAGCGCCGTCACACCATGCGAAAGCTAGAGATCAAACTCGGCCTCACCACTAATTTCCGAAACTCGCCGCCGAGTCACTACTCGCCGAGTCAGATTCGCCGGTTCGACTCGCCCGTTCCGAGTCCTGTTACGCCTCTAGCTACCGAGTCGCTGTTATTTCTGAGGCCCGGCGTGGCCTCGCCGCTGTCGCCGCCGGTGACGGCGGAGGATAAAGCCATAGCTGACGGAGGGTTTTACCTTCACCCGTCGCCGGTTAGTACTCCGAGGAATTTCCAGCCGCCGGAGCTCTTGAATTTGTTCCCCTCCAATTCGCCAAGTGAGCAATCTCAAAATGCA

mRNA sequence

CCGCCGCCACCGCCGCCGCCGTCGCTAACTTCTCCGACCACCTTCGTCCAAGCAGACACAAACTCCTTCCGGGACCTTGTCCAAAAGCTCACCGGCTTTTCCGGTGACTCCGAGAAACTGCCGGTCACTCACCTCTCAAAGCTTTCCTGCTCGAAGCCCTCTCCTCCGGCCGCCGACCACCTCACCGGCCCTCGCCGGTCTCCGTTCAAGCTCCAAGAGCGCCGTCACACCATGCGAAAGCTAGAGATCAAACTCGGCCTCACCACTAATTTCCGAAACTCGCCGCCGAGTCACTACTCGCCGAGTCAGATTCGCCGGTTCGACTCGCCCGTTCCGAGTCCTGTTACGCCTCTAGCTACCGAGTCGCTGTTATTTCTGAGGCCCGGCGTGGCCTCGCCGCTGTCGCCGCCGGTGACGGCGGAGGATAAAGCCATAGCTGACGGAGGGTTTTACCTTCACCCGTCGCCGGTTAGTACTCCGAGGAATTTCCAGCCGCCGGAGCTCTTGAATTTGTTCCCCTCCAATTCGCCAAGTGAGCAATCTCAAAATGCA

Coding sequence (CDS)

CCGCCGCCACCGCCGCCGCCGTCGCTAACTTCTCCGACCACCTTCGTCCAAGCAGACACAAACTCCTTCCGGGACCTTGTCCAAAAGCTCACCGGCTTTTCCGGTGACTCCGAGAAACTGCCGGTCACTCACCTCTCAAAGCTTTCCTGCTCGAAGCCCTCTCCTCCGGCCGCCGACCACCTCACCGGCCCTCGCCGGTCTCCGTTCAAGCTCCAAGAGCGCCGTCACACCATGCGAAAGCTAGAGATCAAACTCGGCCTCACCACTAATTTCCGAAACTCGCCGCCGAGTCACTACTCGCCGAGTCAGATTCGCCGGTTCGACTCGCCCGTTCCGAGTCCTGTTACGCCTCTAGCTACCGAGTCGCTGTTATTTCTGAGGCCCGGCGTGGCCTCGCCGCTGTCGCCGCCGGTGACGGCGGAGGATAAAGCCATAGCTGACGGAGGGTTTTACCTTCACCCGTCGCCGGTTAGTACTCCGAGGAATTTCCAGCCGCCGGAGCTCTTGAATTTGTTCCCCTCCAATTCGCCAAGTGAGCAATCTCAAAATGCA

Protein sequence

PPPPPPPSLTSPTTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLSCSKPSPPAADHLTGPRRSPFKLQERRHTMRKLEIKLGLTTNFRNSPPSHYSPSQIRRFDSPVPSPVTPLATESLLFLRPGVASPLSPPVTAEDKAIADGGFYLHPSPVSTPRNFQPPELLNLFPSNSPSEQSQNA

Homology

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BLAST of MS008579 vs. NCBI nr
Match: XP_022138667.1 (VQ motif-containing protein 4-like [Momordica charantia])

HSP 1 Score: 360.5 bits (924), Expect = 8.4e-96
Identity = 182/184 (98.91%), Postives = 182/184 (98.91%), Query Frame = 0


Query: 1   PPPPPPPSLTSPTTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLSCSKPSPPAADH 60
           PPP PPP LTSPTTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLSCSKPSPPAADH
Sbjct: 12  PPPSPPPWLTSPTTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLSCSKPSPPAADH 71

Query: 61  LTGPRRSPFKLQERRHTMRKLEIKLGLTTNFRNSPPSHYSPSQIRRFDSPVPSPVTPLAT 120
           LTGPRRSPFKLQERRHTMRKLEIKLGLTTNFRNSPPSHYSPSQIRRFDSPVPSPVTPLAT
Sbjct: 72  LTGPRRSPFKLQERRHTMRKLEIKLGLTTNFRNSPPSHYSPSQIRRFDSPVPSPVTPLAT 131

Query: 121 ESLLFLRPGVASPLSPPVTAEDKAIADGGFYLHPSPVSTPRNFQPPELLNLFPSNSPSEQ 180
           ESLLFLRPGVASPLSPPVTAEDKAIADGGFYLHPSPVSTPRNFQPPELLNLFPSNSPSEQ
Sbjct: 132 ESLLFLRPGVASPLSPPVTAEDKAIADGGFYLHPSPVSTPRNFQPPELLNLFPSNSPSEQ 191

Query: 181 SQNA 185
           SQNA
Sbjct: 192 SQNA 195

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BLAST of MS008579 vs. NCBI nr
Match: XP_038899085.1 (VQ motif-containing protein 4-like [Benincasa hispida])

HSP 1 Score: 258.8 bits (660), Expect = 3.5e-65
Identity = 137/171 (80.12%), Postives = 148/171 (86.55%), Query Frame = 0


Query: 5   PPPSLTSPTTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLSCSKPSPPAA-DHLTG 64
           PPPS TSPTTFVQADTNSFRDLVQKLTGF+GDSEKLPVTHLSKLS SKP PP+A D+LTG
Sbjct: 11  PPPS-TSPTTFVQADTNSFRDLVQKLTGFAGDSEKLPVTHLSKLSSSKPFPPSATDYLTG 70

Query: 65  PRRSPFKLQERRHTMRKLEIKLGLTTNFRNSPPSHYSPSQIRRFDSPVPSPVTPLATESL 124
           PRRSPFKLQERRHT+RKLEI LG T  F+N PPS  SP+  RR DSPVPSPVTPLA +SL
Sbjct: 71  PRRSPFKLQERRHTIRKLEINLGFTGPFKNLPPSLKSPNPTRRVDSPVPSPVTPLAADSL 130

Query: 125 LFLRPGVASPLSPPVTAEDKAIADGGFYLHPSPVSTPRNFQPPELLNLFPS 175
            F +P +ASPLSPPVTAEDKAIADGGFYLHPS    PR+ QPPELLNLFP+
Sbjct: 131 FFRKPSMASPLSPPVTAEDKAIADGGFYLHPS----PRSSQPPELLNLFPT 176

[Close]

BLAST of MS008579 vs. NCBI nr
Match: XP_022977123.1 (VQ motif-containing protein 11-like [Cucurbita maxima])

HSP 1 Score: 253.1 bits (645), Expect = 1.9e-63
Identity = 138/174 (79.31%), Postives = 144/174 (82.76%), Query Frame = 0


Query: 1   PPPPPPPSLTSPTTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLSCSKPSPPAADH 60
           PPPPP PS TSPTTFVQAD NSFRDLVQKLTGFSG SEKLPVTHLSKLS S P PPA DH
Sbjct: 11  PPPPPLPS-TSPTTFVQADPNSFRDLVQKLTGFSGHSEKLPVTHLSKLSSSNPLPPATDH 70

Query: 61  LTGPRRSPFKLQERRHTMRKLEIKLGLTTNFRNSPPSHYSPSQIRRFDSPVPSPVTPLAT 120
            TGPRRSPFKLQERRHT+RKLEIKLG T  F+N      SPS  RRFDSP+PSPVTPLA 
Sbjct: 71  HTGPRRSPFKLQERRHTIRKLEIKLGPTGIFKN------SPSHPRRFDSPIPSPVTPLAV 130

Query: 121 ESLLFLRPGVASPLSPPVTAEDKAIADGGFYLHPSPVSTPRNFQPPELLNLFPS 175
           E L   +PGVASPL+PPVTAEDKAIADGGFYLHPS    PR+ QPPELLNLFPS
Sbjct: 131 EFLFLRKPGVASPLTPPVTAEDKAIADGGFYLHPS----PRSSQPPELLNLFPS 173

[Close]

BLAST of MS008579 vs. NCBI nr
Match: XP_008452821.1 (PREDICTED: VQ motif-containing protein 31-like [Cucumis melo] >KAA0064567.1 VQ motif-containing protein 31-like [Cucumis melo var. makuwa] >TYK20023.1 VQ motif-containing protein 31-like [Cucumis melo var. makuwa])

HSP 1 Score: 253.1 bits (645), Expect = 1.9e-63
Identity = 139/171 (81.29%), Postives = 145/171 (84.80%), Query Frame = 0


Query: 5   PPPSLTSPTTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLSCSKPSPP-AADHLTG 64
           PPPS TSPTTFVQADTNSFRDLVQKLTGF+GDSEKLPVTHLSKLS SKP PP AAD+ TG
Sbjct: 11  PPPS-TSPTTFVQADTNSFRDLVQKLTGFAGDSEKLPVTHLSKLSSSKPFPPLAADYHTG 70

Query: 65  PRRSPFKLQERRHTMRKLEIKLGLTTNFRNSPPSHYSPSQIRRFDSPVPSPVTPLATESL 124
           PRRSPFKLQERRHT+RKLEIKL LT  F+NS PSH      RR DSPVPSPVTPLA ESL
Sbjct: 71  PRRSPFKLQERRHTIRKLEIKLSLTGPFKNSSPSH-----TRRVDSPVPSPVTPLAAESL 130

Query: 125 LFLRPGVASPLSPPVTAEDKAIADGGFYLHPSPVSTPRNFQPPELLNLFPS 175
            F RP VASPL+PPVTAEDKAIADG FYLHPS    PR+ QPPELLNLFPS
Sbjct: 131 FFRRPSVASPLTPPVTAEDKAIADGEFYLHPS----PRSSQPPELLNLFPS 171

[Close]

BLAST of MS008579 vs. NCBI nr
Match: KAE8649934.1 (hypothetical protein Csa_012580 [Cucumis sativus])

HSP 1 Score: 252.7 bits (644), Expect = 2.5e-63
Identity = 138/180 (76.67%), Postives = 148/180 (82.22%), Query Frame = 0


Query: 5   PPPSLTSPTTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLSCSKP-SPPAADHLTG 64
           PPPS TSPTTFVQADTNSFRDLVQKLTGF+GDSEKLPVTHLSKLS SKP  PPAAD+ TG
Sbjct: 11  PPPS-TSPTTFVQADTNSFRDLVQKLTGFAGDSEKLPVTHLSKLSSSKPFPPPAADYHTG 70

Query: 65  PRRSPFKLQERRHTMRKLEIKLGLTTNFRNSPPSHYSPSQIRRFDSPVPSPVTPLATESL 124
           PRRSPFKLQERRHT+RKLEI+L LT  F+NS PSH      RR DSPVP PVTPLA ESL
Sbjct: 71  PRRSPFKLQERRHTIRKLEIQLALTRPFKNSSPSH-----TRRVDSPVPGPVTPLAAESL 130

Query: 125 LFLRPGVASPLSPPVTAEDKAIADGGFYLHPSPVSTPRNFQPPELLNLFPSNSPSEQSQN 184
            F RP V SPLSPPVTAEDKAIAD GFYLHPS    PR+ QPPELLNLFPS  P+ ++ +
Sbjct: 131 FFRRPSVTSPLSPPVTAEDKAIADSGFYLHPS----PRSSQPPELLNLFPSKFPNAKTNS 180

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BLAST of MS008579 vs. ExPASy Swiss-Prot
Match: Q9FHZ3 (VQ motif-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=VQ33 PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.0e-15
Identity = 77/204 (37.75%), Postives = 102/204 (50.00%), Query Frame = 0


Query: 12  PTTFVQADTNSFRDLVQKLTGFSGDS-------EKLPVTHLSKLSCSKPSPPAADHLTGP 71
           PTTFVQADT++F+ +VQ LTG S D+          PV + +K S S   PP        
Sbjct: 48  PTTFVQADTSTFKQVVQMLTGSSTDTTTGKHHEAPSPVNNNNKGS-SFSIPPI------K 107

Query: 72  RRSPFKLQERRHTMRKLEIKLGL---TTNFRNSPPSHYSPSQIRRFDSPVPSPVTPLATE 131
           + + FKL ERR     +  K  L   T   +NS    ++        SP  SP    ++E
Sbjct: 108 KTNSFKLYERRQNNNNMFAKNDLMINTLRLQNSQRLMFTGGNSSHHQSPRFSPRNSSSSE 167

Query: 132 SLL-------FLRPGVASPLSP------------PV-----TAEDKAIADGGFYLHPSPV 182
           ++L       F + G+ SP++P            P+     + EDKAIAD GFYLHPSPV
Sbjct: 168 NILLSPSMLDFPKLGLNSPVTPLRSNDDPFNKSSPLSLGNSSEEDKAIADKGFYLHPSPV 227

[Close]

BLAST of MS008579 vs. ExPASy Swiss-Prot
Match: Q5M750 (VQ motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=VQ4 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 7.6e-15
Identity = 79/204 (38.73%), Postives = 102/204 (50.00%), Query Frame = 0


Query: 1   PPPPPPPSLTS--------PTTFVQADTNSFRDLVQKLTGFS-----GDSEKLPVTHLSK 60
           PP  P   +T+        PTTFVQADT+SF+ +VQ LTG +     G S K   TH   
Sbjct: 37  PPTTPTRHVTTRSESGNPYPTTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQP 96

Query: 61  LSCSKPS----PPAA----DHLTGPRRSPFKLQERRHTMRKLEIK------LGLTTNFRN 120
              S PS    PP         +    S F+L ERR++M+ L+I         + + F  
Sbjct: 97  DPRSTPSSFSIPPIKAVPNKKQSSSSASGFRLYERRNSMKNLKINPLNPVFNPVNSAFSP 156

Query: 121 SPPSHYSPSQIRRFDSPVPSPVTPLATESLLFLRPGVASPLSPPVTAEDKAIADGGFYLH 178
             P   SPS I  F S V SPVTPL  +   F R G ++     + AE+KA+ + GFYLH
Sbjct: 157 RKPEILSPS-ILDFPSLVLSPVTPLIPDP--FDRSGSSNQSPNELAAEEKAMKERGFYLH 216

[Close]

BLAST of MS008579 vs. ExPASy Swiss-Prot
Match: Q9FNP0 (VQ motif-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=VQ31 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.6e-12
Identity = 62/172 (36.05%), Postives = 87/172 (50.58%), Query Frame = 0


Query: 13  TTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLSCSKPSPPAADHLTGPRRSP-FKL 72
           TTFVQ DTN+FR++VQ+LTG             ++ + +  +P A    T  ++ P  KL
Sbjct: 17  TTFVQTDTNTFREIVQRLTG------------PTENNAAAATPEATVIKTAIQKRPTSKL 76

Query: 73  QERRHTMRKLEIKLGLTTNFRNSPPSHYSPSQIRRFDSPVPSPV-TPLATESLLFLRPGV 132
            ERR  MR    KL +     +  P+  +PS      + + SPV TP +  S L L  G 
Sbjct: 77  HERRQCMRP---KLEIVKPPLSFKPTGTTPSSKSGNTNLLTSPVGTPSSLFSNLSLIEGE 136

Query: 133 ASPLSPPVTAEDKAIADGGFYLHPSPVSTPRNFQPPELLNLFPSNSPSEQSQ 183
               +  +  E+KAI +  FYLHPSP S P  +  PELL LFP  SP+   +
Sbjct: 137 PDSCTTNIEEEEKAIKERRFYLHPSPRSKP-GYTEPELLTLFPLTSPNSSGK 172

[Close]

BLAST of MS008579 vs. ExPASy Swiss-Prot
Match: Q9M8L3 (VQ motif-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=VQ11 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.0e-11
Identity = 65/186 (34.95%), Postives = 85/186 (45.70%), Query Frame = 0


Query: 5   PPPSLTSPTT-FVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLSCSKPSPPAADHLTG 64
           PP   T P T FVQAD ++FR++VQKLTG   D   +  +  S +S +    P       
Sbjct: 6   PPSYATEPNTMFVQADPSNFRNIVQKLTGAPPD---ISSSSFSAVSAAHQKLPLT----- 65

Query: 65  PRRSPFKLQERRHTMRKLEIKLGLTTN-----------FRNSPPSHYSPSQIRRFDSPVP 124
           P++  FKL ERR + +K+E+K+   TN           F  SP SH  P   R       
Sbjct: 66  PKKPAFKLHERRQSSKKMELKVNNITNPNDAFSHFHRGFLVSPVSHLDPFWAR------- 125

Query: 125 SPVTPLATESLLFLRPGVASPLSPPVTAEDKAIADGGFYLHPSPVSTPRNFQPPELLNLF 179
             V+P +               + P   E KAIA+ GFY  PSP S       PELL LF
Sbjct: 126 --VSPHSARE---------EHHAQPDKEEQKAIAEKGFYFLPSPRSGSE--PAPELLPLF 163

[Close]

BLAST of MS008579 vs. ExPASy Swiss-Prot
Match: Q9LDZ1 (VQ motif-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=VQ19 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.9e-11
Identity = 69/184 (37.50%), Postives = 90/184 (48.91%), Query Frame = 0


Query: 12  PTTFVQADTNSFRDLVQKLTGFSG----DSEKLPVTHLSKLSCSKPSPPAADHLTGPRRS 71
           PTTFVQAD++SF+ +VQ LTG S     DS + P T   K +   P    A      + S
Sbjct: 36  PTTFVQADSSSFKQVVQMLTGSSSPRSPDSPRPPTTPSGKGNFVIPPIKTAQ---PKKHS 95

Query: 72  PFKLQERR-HTMRKLEIKLGLTTNF-----------RNSPPSH--YSPSQIRRFDSPVPS 131
             KL ERR H      +K  L  N            R SP +    SPS +      + S
Sbjct: 96  GNKLYERRSHGGFNNNLKNSLMINTLMIGGGGAGSPRFSPRNQEILSPSCLDFPKLALNS 155

Query: 132 PVTPLATESLLFLRPGVASPLSPPVTAEDKAIADGGFYLHPSPVSTPRNFQPPELLNLFP 178
           PVTPL   +      G       P++ E++ IAD G+YLH SP+STPR+ + P+LL LFP
Sbjct: 156 PVTPLKQGT--NGNEGDPFDKMSPLSEEERGIADKGYYLHRSPISTPRDSE-PQLLPLFP 213

[Close]

BLAST of MS008579 vs. ExPASy TrEMBL
Match: A0A6J1CBS5 (VQ motif-containing protein 4-like OS=Momordica charantia OX=3673 GN=LOC111009767 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 4.1e-96
Identity = 182/184 (98.91%), Postives = 182/184 (98.91%), Query Frame = 0


Query: 1   PPPPPPPSLTSPTTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLSCSKPSPPAADH 60
           PPP PPP LTSPTTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLSCSKPSPPAADH
Sbjct: 12  PPPSPPPWLTSPTTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLSCSKPSPPAADH 71

Query: 61  LTGPRRSPFKLQERRHTMRKLEIKLGLTTNFRNSPPSHYSPSQIRRFDSPVPSPVTPLAT 120
           LTGPRRSPFKLQERRHTMRKLEIKLGLTTNFRNSPPSHYSPSQIRRFDSPVPSPVTPLAT
Sbjct: 72  LTGPRRSPFKLQERRHTMRKLEIKLGLTTNFRNSPPSHYSPSQIRRFDSPVPSPVTPLAT 131

Query: 121 ESLLFLRPGVASPLSPPVTAEDKAIADGGFYLHPSPVSTPRNFQPPELLNLFPSNSPSEQ 180
           ESLLFLRPGVASPLSPPVTAEDKAIADGGFYLHPSPVSTPRNFQPPELLNLFPSNSPSEQ
Sbjct: 132 ESLLFLRPGVASPLSPPVTAEDKAIADGGFYLHPSPVSTPRNFQPPELLNLFPSNSPSEQ 191

Query: 181 SQNA 185
           SQNA
Sbjct: 192 SQNA 195

[Close]

BLAST of MS008579 vs. ExPASy TrEMBL
Match: A0A5A7VC76 (VQ motif-containing protein 31-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001410 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 9.2e-64
Identity = 139/171 (81.29%), Postives = 145/171 (84.80%), Query Frame = 0


Query: 5   PPPSLTSPTTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLSCSKPSPP-AADHLTG 64
           PPPS TSPTTFVQADTNSFRDLVQKLTGF+GDSEKLPVTHLSKLS SKP PP AAD+ TG
Sbjct: 11  PPPS-TSPTTFVQADTNSFRDLVQKLTGFAGDSEKLPVTHLSKLSSSKPFPPLAADYHTG 70

Query: 65  PRRSPFKLQERRHTMRKLEIKLGLTTNFRNSPPSHYSPSQIRRFDSPVPSPVTPLATESL 124
           PRRSPFKLQERRHT+RKLEIKL LT  F+NS PSH      RR DSPVPSPVTPLA ESL
Sbjct: 71  PRRSPFKLQERRHTIRKLEIKLSLTGPFKNSSPSH-----TRRVDSPVPSPVTPLAAESL 130

Query: 125 LFLRPGVASPLSPPVTAEDKAIADGGFYLHPSPVSTPRNFQPPELLNLFPS 175
            F RP VASPL+PPVTAEDKAIADG FYLHPS    PR+ QPPELLNLFPS
Sbjct: 131 FFRRPSVASPLTPPVTAEDKAIADGEFYLHPS----PRSSQPPELLNLFPS 171

[Close]

BLAST of MS008579 vs. ExPASy TrEMBL
Match: A0A6J1IP36 (VQ motif-containing protein 11-like OS=Cucurbita maxima OX=3661 GN=LOC111477285 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 9.2e-64
Identity = 138/174 (79.31%), Postives = 144/174 (82.76%), Query Frame = 0


Query: 1   PPPPPPPSLTSPTTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLSCSKPSPPAADH 60
           PPPPP PS TSPTTFVQAD NSFRDLVQKLTGFSG SEKLPVTHLSKLS S P PPA DH
Sbjct: 11  PPPPPLPS-TSPTTFVQADPNSFRDLVQKLTGFSGHSEKLPVTHLSKLSSSNPLPPATDH 70

Query: 61  LTGPRRSPFKLQERRHTMRKLEIKLGLTTNFRNSPPSHYSPSQIRRFDSPVPSPVTPLAT 120
            TGPRRSPFKLQERRHT+RKLEIKLG T  F+N      SPS  RRFDSP+PSPVTPLA 
Sbjct: 71  HTGPRRSPFKLQERRHTIRKLEIKLGPTGIFKN------SPSHPRRFDSPIPSPVTPLAV 130

Query: 121 ESLLFLRPGVASPLSPPVTAEDKAIADGGFYLHPSPVSTPRNFQPPELLNLFPS 175
           E L   +PGVASPL+PPVTAEDKAIADGGFYLHPS    PR+ QPPELLNLFPS
Sbjct: 131 EFLFLRKPGVASPLTPPVTAEDKAIADGGFYLHPS----PRSSQPPELLNLFPS 173

[Close]

BLAST of MS008579 vs. ExPASy TrEMBL
Match: A0A1S3BVZ0 (VQ motif-containing protein 31-like OS=Cucumis melo OX=3656 GN=LOC103493731 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 9.2e-64
Identity = 139/171 (81.29%), Postives = 145/171 (84.80%), Query Frame = 0


Query: 5   PPPSLTSPTTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLSCSKPSPP-AADHLTG 64
           PPPS TSPTTFVQADTNSFRDLVQKLTGF+GDSEKLPVTHLSKLS SKP PP AAD+ TG
Sbjct: 11  PPPS-TSPTTFVQADTNSFRDLVQKLTGFAGDSEKLPVTHLSKLSSSKPFPPLAADYHTG 70

Query: 65  PRRSPFKLQERRHTMRKLEIKLGLTTNFRNSPPSHYSPSQIRRFDSPVPSPVTPLATESL 124
           PRRSPFKLQERRHT+RKLEIKL LT  F+NS PSH      RR DSPVPSPVTPLA ESL
Sbjct: 71  PRRSPFKLQERRHTIRKLEIKLSLTGPFKNSSPSH-----TRRVDSPVPSPVTPLAAESL 130

Query: 125 LFLRPGVASPLSPPVTAEDKAIADGGFYLHPSPVSTPRNFQPPELLNLFPS 175
            F RP VASPL+PPVTAEDKAIADG FYLHPS    PR+ QPPELLNLFPS
Sbjct: 131 FFRRPSVASPLTPPVTAEDKAIADGEFYLHPS----PRSSQPPELLNLFPS 171

[Close]

BLAST of MS008579 vs. ExPASy TrEMBL
Match: A0A0A0L104 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G651800 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.6e-63
Identity = 138/174 (79.31%), Postives = 144/174 (82.76%), Query Frame = 0


Query: 5   PPPSLTSPTTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLSCSKP-SPPAADHLTG 64
           PPPS TSPTTFVQADTNSFRDLVQKLTGF+GDSEKLPVTHLSKLS SKP  PPAAD+ TG
Sbjct: 11  PPPS-TSPTTFVQADTNSFRDLVQKLTGFAGDSEKLPVTHLSKLSSSKPFPPPAADYHTG 70

Query: 65  PRRSPFKLQERRHTMRKLEIKLGLTTNFRNSPPSHYSPSQIRRFDSPVPSPVTPLATESL 124
           PRRSPFKLQERRHT+RKLEI+L LT  F+NS PSH      RR DSPVP PVTPLA ESL
Sbjct: 71  PRRSPFKLQERRHTIRKLEIQLALTRPFKNSSPSH-----TRRVDSPVPGPVTPLAAESL 130

Query: 125 LFLRPGVASPLSPPVTAEDKAIADGGFYLHPSPVSTPRNFQPPELLNLFPSNSP 178
            F RP V SPLSPPVTAEDKAIAD GFYLHPS    PR+ QPPELLNLFPS  P
Sbjct: 131 FFRRPSVTSPLSPPVTAEDKAIADSGFYLHPS----PRSSQPPELLNLFPSKFP 174

[Close]

BLAST of MS008579 vs. TAIR 10
Match: AT5G53830.1 (VQ motif-containing protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-16
Identity = 77/204 (37.75%), Postives = 102/204 (50.00%), Query Frame = 0


Query: 12  PTTFVQADTNSFRDLVQKLTGFSGDS-------EKLPVTHLSKLSCSKPSPPAADHLTGP 71
           PTTFVQADT++F+ +VQ LTG S D+          PV + +K S S   PP        
Sbjct: 48  PTTFVQADTSTFKQVVQMLTGSSTDTTTGKHHEAPSPVNNNNKGS-SFSIPPI------K 107

Query: 72  RRSPFKLQERRHTMRKLEIKLGL---TTNFRNSPPSHYSPSQIRRFDSPVPSPVTPLATE 131
           + + FKL ERR     +  K  L   T   +NS    ++        SP  SP    ++E
Sbjct: 108 KTNSFKLYERRQNNNNMFAKNDLMINTLRLQNSQRLMFTGGNSSHHQSPRFSPRNSSSSE 167

Query: 132 SLL-------FLRPGVASPLSP------------PV-----TAEDKAIADGGFYLHPSPV 182
           ++L       F + G+ SP++P            P+     + EDKAIAD GFYLHPSPV
Sbjct: 168 NILLSPSMLDFPKLGLNSPVTPLRSNDDPFNKSSPLSLGNSSEEDKAIADKGFYLHPSPV 227

[Close]

BLAST of MS008579 vs. TAIR 10
Match: AT1G28280.1 (VQ motif-containing protein )

HSP 1 Score: 82.0 bits (201), Expect = 5.4e-16
Identity = 79/204 (38.73%), Postives = 102/204 (50.00%), Query Frame = 0


Query: 1   PPPPPPPSLTS--------PTTFVQADTNSFRDLVQKLTGFS-----GDSEKLPVTHLSK 60
           PP  P   +T+        PTTFVQADT+SF+ +VQ LTG +     G S K   TH   
Sbjct: 37  PPTTPTRHVTTRSESGNPYPTTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQP 96

Query: 61  LSCSKPS----PPAA----DHLTGPRRSPFKLQERRHTMRKLEIK------LGLTTNFRN 120
              S PS    PP         +    S F+L ERR++M+ L+I         + + F  
Sbjct: 97  DPRSTPSSFSIPPIKAVPNKKQSSSSASGFRLYERRNSMKNLKINPLNPVFNPVNSAFSP 156

Query: 121 SPPSHYSPSQIRRFDSPVPSPVTPLATESLLFLRPGVASPLSPPVTAEDKAIADGGFYLH 178
             P   SPS I  F S V SPVTPL  +   F R G ++     + AE+KA+ + GFYLH
Sbjct: 157 RKPEILSPS-ILDFPSLVLSPVTPLIPDP--FDRSGSSNQSPNELAAEEKAMKERGFYLH 216

[Close]

BLAST of MS008579 vs. TAIR 10
Match: AT1G28280.2 (VQ motif-containing protein )

HSP 1 Score: 82.0 bits (201), Expect = 5.4e-16
Identity = 79/204 (38.73%), Postives = 102/204 (50.00%), Query Frame = 0


Query: 1   PPPPPPPSLTS--------PTTFVQADTNSFRDLVQKLTGFS-----GDSEKLPVTHLSK 60
           PP  P   +T+        PTTFVQADT+SF+ +VQ LTG +     G S K   TH   
Sbjct: 37  PPTTPTRHVTTRSESGNPYPTTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQP 96

Query: 61  LSCSKPS----PPAA----DHLTGPRRSPFKLQERRHTMRKLEIK------LGLTTNFRN 120
              S PS    PP         +    S F+L ERR++M+ L+I         + + F  
Sbjct: 97  DPRSTPSSFSIPPIKAVPNKKQSSSSASGFRLYERRNSMKNLKINPLNPVFNPVNSAFSP 156

Query: 121 SPPSHYSPSQIRRFDSPVPSPVTPLATESLLFLRPGVASPLSPPVTAEDKAIADGGFYLH 178
             P   SPS I  F S V SPVTPL  +   F R G ++     + AE+KA+ + GFYLH
Sbjct: 157 RKPEILSPS-ILDFPSLVLSPVTPLIPDP--FDRSGSSNQSPNELAAEEKAMKERGFYLH 216

[Close]

BLAST of MS008579 vs. TAIR 10
Match: AT5G08480.2 (VQ motif-containing protein )

HSP 1 Score: 72.8 bits (177), Expect = 3.3e-13
Identity = 62/172 (36.05%), Postives = 87/172 (50.58%), Query Frame = 0


Query: 13  TTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLSCSKPSPPAADHLTGPRRSP-FKL 72
           TTFVQ DTN+FR++VQ+LTG             ++ + +  +P A    T  ++ P  KL
Sbjct: 17  TTFVQTDTNTFREIVQRLTG------------PTENNAAAATPEATVIKTAIQKRPTSKL 76

Query: 73  QERRHTMRKLEIKLGLTTNFRNSPPSHYSPSQIRRFDSPVPSPV-TPLATESLLFLRPGV 132
            ERR  MR    KL +     +  P+  +PS      + + SPV TP +  S L L  G 
Sbjct: 77  HERRQCMRP---KLEIVKPPLSFKPTGTTPSSKSGNTNLLTSPVGTPSSLFSNLSLIEGE 136

Query: 133 ASPLSPPVTAEDKAIADGGFYLHPSPVSTPRNFQPPELLNLFPSNSPSEQSQ 183
               +  +  E+KAI +  FYLHPSP S P  +  PELL LFP  SP+   +
Sbjct: 137 PDSCTTNIEEEEKAIKERRFYLHPSPRSKP-GYTEPELLTLFPLTSPNSSGK 172

[Close]

BLAST of MS008579 vs. TAIR 10
Match: AT1G80450.1 (VQ motif-containing protein )

HSP 1 Score: 70.1 bits (170), Expect = 2.1e-12
Identity = 65/186 (34.95%), Postives = 85/186 (45.70%), Query Frame = 0


Query: 5   PPPSLTSPTT-FVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLSCSKPSPPAADHLTG 64
           PP   T P T FVQAD ++FR++VQKLTG   D   +  +  S +S +    P       
Sbjct: 6   PPSYATEPNTMFVQADPSNFRNIVQKLTGAPPD---ISSSSFSAVSAAHQKLPLT----- 65

Query: 65  PRRSPFKLQERRHTMRKLEIKLGLTTN-----------FRNSPPSHYSPSQIRRFDSPVP 124
           P++  FKL ERR + +K+E+K+   TN           F  SP SH  P   R       
Sbjct: 66  PKKPAFKLHERRQSSKKMELKVNNITNPNDAFSHFHRGFLVSPVSHLDPFWAR------- 125

Query: 125 SPVTPLATESLLFLRPGVASPLSPPVTAEDKAIADGGFYLHPSPVSTPRNFQPPELLNLF 179
             V+P +               + P   E KAIA+ GFY  PSP S       PELL LF
Sbjct: 126 --VSPHSARE---------EHHAQPDKEEQKAIAEKGFYFLPSPRSGSE--PAPELLPLF 163

The following BLAST results are available for this feature:

BLAST of MS008579 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138667.1	8.4e-96	98.91	VQ motif-containing protein 4-like [Momordica charantia]	[more]
XP_038899085.1	3.5e-65	80.12	VQ motif-containing protein 4-like [Benincasa hispida]	[more]
XP_022977123.1	1.9e-63	79.31	VQ motif-containing protein 11-like [Cucurbita maxima]	[more]
XP_008452821.1	1.9e-63	81.29	PREDICTED: VQ motif-containing protein 31-like [Cucumis melo] >KAA0064567.1 VQ m...	[more]
KAE8649934.1	2.5e-63	76.67	hypothetical protein Csa_012580 [Cucumis sativus]	[more]

BLAST of MS008579 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FHZ3	2.0e-15	37.75	VQ motif-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=VQ33 PE=1 SV=1	[more]
Q5M750	7.6e-15	38.73	VQ motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=VQ4 PE=1 SV=1	[more]
Q9FNP0	4.6e-12	36.05	VQ motif-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=VQ31 PE=1 SV=1	[more]
Q9M8L3	3.0e-11	34.95	VQ motif-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=VQ11 PE=1 SV=1	[more]
Q9LDZ1	3.9e-11	37.50	VQ motif-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=VQ19 PE=1 SV=1	[more]

BLAST of MS008579 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CBS5	4.1e-96	98.91	VQ motif-containing protein 4-like OS=Momordica charantia OX=3673 GN=LOC11100976...	[more]
A0A5A7VC76	9.2e-64	81.29	VQ motif-containing protein 31-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A6J1IP36	9.2e-64	79.31	VQ motif-containing protein 11-like OS=Cucurbita maxima OX=3661 GN=LOC111477285 ...	[more]
A0A1S3BVZ0	9.2e-64	81.29	VQ motif-containing protein 31-like OS=Cucumis melo OX=3656 GN=LOC103493731 PE=4...	[more]
A0A0A0L104	1.6e-63	79.31	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G651800 PE=4 SV=...	[more]

BLAST of MS008579 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53830.1	1.4e-16	37.75	VQ motif-containing protein	[more]
AT1G28280.1	5.4e-16	38.73	VQ motif-containing protein	[more]
AT1G28280.2	5.4e-16	38.73	VQ motif-containing protein	[more]
AT5G08480.2	3.3e-13	36.05	VQ motif-containing protein	[more]
AT1G80450.1	2.1e-12	34.95	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 10..35 e-value: 3.8E-11 score: 42.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..111
None	No IPR available	PANTHER	PTHR33402:SF3	VQ MOTIF-CONTAINING PROTEIN 11-LIKE	coord: 6..180
IPR039611	VQ motif-containing protein 4/11/13/19/31/33	PANTHER	PTHR33402	VQ MOTIF-CONTAINING PROTEIN 11-LIKE	coord: 6..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS008579.1	MS008579.1	mRNA