MS008544 (gene) Bitter gourd (TR) v1

Overview


Name	MS008544
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Mitochondrial glycoprotein family protein
Location	scaffold4: 2111880 .. 2113103 (+)
RNA-Seq Expression	MS008544
Synteny	MS008544

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGGCGTTTTCCGATCAGCTCACCGGGAGATTCGTTCTTCTTACAGTAGAATCTTCAATCCTCGATTATGGCGCCGCCATTGTTCTCCTTCACGAAGCACCATCATCTCGACGTCGCTCTTCACCAGGCCATTTGTTTCCGCCGCTAATCCCAAGTCTCCCTTCGACGCCATCGCTCTCCGAGTACTTCGTAACGAGATCGAGTATCAGTCCAATTACGCTCCTCCCCATCAGGTTCAGCGGTTCTTACTTCGTCCTACATTTTCATTTTTTTCCCCCTAATTTAAGATTTGATTAATCATTTAGAATGCTTGCGTTAATTCTGTTGCGGAATTCTATAGCCTGTAACGAAGTTCAATTCATTTTCGGTTGAAGACCGACCCGGCGAACAGTGGATCACATTGAGAGGGAAATTTATGGACACAGAAGAAATTAAAATCGAAGCGACGATGTTCGATGGCTGTGAAACTGTTCCTAGACCTGGAGACGACAGCGATGGTGAGGAGGACCTCCGTCTCCATATTAGCGTGCTTGTCGACATTTCGAAGGGTGATGGTTCCGACGATTTGGAGTTTATGTGCTCGGCATGGCCTGATTCTTTGGAGGTTCAGAAAGTATATGTACTTCGGCGAGATAGAATGCTGGCAAGACCATTTATGGGTCCTGATTTTAGGTATCGCTAATCTCAGATGCTCTGTTTCTCATCATTTCTGTTTAATTTTTTTATTGTTTCGGCCACTTTTGGTGATTCATTACAAATTATTGCCCATTTTGGTGTAGATTTGGATGCCCAATATCTGAAAAAATTGAATAACAGTTTGATGGGGGTTGAAGATTTGTCTGCCCTTAACAATACTTGGATATTGGTTCAAAGTATAGTTTTTCAATTCTATTTTATACATCAAATGGTATAGGATTGTTCTAGCCCCTCAAATAATTTCTCCAATATTGGTTGGCTATTATCGCAATGCATAATTTAGTTAAGGGAATTAAGTTTTAAGCTTGTTGTGCTCTAACTCCTTTTATCTACTAATGATCTTTTTTTTTTTTTTTTCTGACTTCAGGAAACTGAGTGGTGAGATTCAGACGAAATTTCGTGAGTTTTTAGCAGAACGAGGGATAGATAACGAGCTTACTCTATTTTTGCACGAATTTATGATGAACAAAGACAGATGTGAACTTATTCGGTGGTTGGGAACTGTCAAGTCTTTTGTGGAAAGA

mRNA sequence

ATGTCGGGCGTTTTCCGATCAGCTCACCGGGAGATTCGTTCTTCTTACAGTAGAATCTTCAATCCTCGATTATGGCGCCGCCATTGTTCTCCTTCACGAAGCACCATCATCTCGACGTCGCTCTTCACCAGGCCATTTGTTTCCGCCGCTAATCCCAAGTCTCCCTTCGACGCCATCGCTCTCCGAGTACTTCGTAACGAGATCGAGTATCAGTCCAATTACGCTCCTCCCCATCAGCCTGTAACGAAGTTCAATTCATTTTCGGTTGAAGACCGACCCGGCGAACAGTGGATCACATTGAGAGGGAAATTTATGGACACAGAAGAAATTAAAATCGAAGCGACGATGTTCGATGGCTGTGAAACTGTTCCTAGACCTGGAGACGACAGCGATGGTGAGGAGGACCTCCGTCTCCATATTAGCGTGCTTGTCGACATTTCGAAGGGTGATGGTTCCGACGATTTGGAGTTTATGTGCTCGGCATGGCCTGATTCTTTGGAGGTTCAGAAAGTATATGTACTTCGGCGAGATAGAATGCTGGCAAGACCATTTATGGGTCCTGATTTTAGGAAACTGAGTGGTGAGATTCAGACGAAATTTCGTGAGTTTTTAGCAGAACGAGGGATAGATAACGAGCTTACTCTATTTTTGCACGAATTTATGATGAACAAAGACAGATGTGAACTTATTCGGTGGTTGGGAACTGTCAAGTCTTTTGTGGAAAGA

Coding sequence (CDS)

ATGTCGGGCGTTTTCCGATCAGCTCACCGGGAGATTCGTTCTTCTTACAGTAGAATCTTCAATCCTCGATTATGGCGCCGCCATTGTTCTCCTTCACGAAGCACCATCATCTCGACGTCGCTCTTCACCAGGCCATTTGTTTCCGCCGCTAATCCCAAGTCTCCCTTCGACGCCATCGCTCTCCGAGTACTTCGTAACGAGATCGAGTATCAGTCCAATTACGCTCCTCCCCATCAGCCTGTAACGAAGTTCAATTCATTTTCGGTTGAAGACCGACCCGGCGAACAGTGGATCACATTGAGAGGGAAATTTATGGACACAGAAGAAATTAAAATCGAAGCGACGATGTTCGATGGCTGTGAAACTGTTCCTAGACCTGGAGACGACAGCGATGGTGAGGAGGACCTCCGTCTCCATATTAGCGTGCTTGTCGACATTTCGAAGGGTGATGGTTCCGACGATTTGGAGTTTATGTGCTCGGCATGGCCTGATTCTTTGGAGGTTCAGAAAGTATATGTACTTCGGCGAGATAGAATGCTGGCAAGACCATTTATGGGTCCTGATTTTAGGAAACTGAGTGGTGAGATTCAGACGAAATTTCGTGAGTTTTTAGCAGAACGAGGGATAGATAACGAGCTTACTCTATTTTTGCACGAATTTATGATGAACAAAGACAGATGTGAACTTATTCGGTGGTTGGGAACTGTCAAGTCTTTTGTGGAAAGA

Protein sequence

MSGVFRSAHREIRSSYSRIFNPRLWRRHCSPSRSTIISTSLFTRPFVSAANPKSPFDAIALRVLRNEIEYQSNYAPPHQPVTKFNSFSVEDRPGEQWITLRGKFMDTEEIKIEATMFDGCETVPRPGDDSDGEEDLRLHISVLVDISKGDGSDDLEFMCSAWPDSLEVQKVYVLRRDRMLARPFMGPDFRKLSGEIQTKFREFLAERGIDNELTLFLHEFMMNKDRCELIRWLGTVKSFVER

Homology

[Close]

BLAST of MS008544 vs. NCBI nr
Match: XP_022150088.1 (uncharacterized protein At2g39795, mitochondrial [Momordica charantia])

HSP 1 Score: 496.5 bits (1277), Expect = 1.3e-136
Identity = 241/242 (99.59%), Postives = 241/242 (99.59%), Query Frame = 0


Query: 1   MSGVFRSAHREIRSSYSRIFNPRLWRRHCSPSRSTIISTSLFTRPFVSAANPKSPFDAIA 60
           MSGVFRSAHREIRSSYSRIFNPRLWRRHCSPSRSTIISTSLFTRPFVSAANPKSPFDAIA
Sbjct: 1   MSGVFRSAHREIRSSYSRIFNPRLWRRHCSPSRSTIISTSLFTRPFVSAANPKSPFDAIA 60

Query: 61  LRVLRNEIEYQSNYAPPHQPVTKFNSFSVEDRPGEQWITLRGKFMDTEEIKIEATMFDGC 120
           LRVLRNEIEYQSNYAPPHQPVTKFNSFSVEDRPGEQWITLRGKFMDTEEIKIEATMFDGC
Sbjct: 61  LRVLRNEIEYQSNYAPPHQPVTKFNSFSVEDRPGEQWITLRGKFMDTEEIKIEATMFDGC 120

Query: 121 ETVPRPGDDSDGEEDLRLHISVLVDISKGDGSDDLEFMCSAWPDSLEVQKVYVLRRDRML 180
           ETVPRPGDDSDGEEDLRLHISVLVDISKGDGSDDLEFMCSAWPD LEVQKVYVLRRDRML
Sbjct: 121 ETVPRPGDDSDGEEDLRLHISVLVDISKGDGSDDLEFMCSAWPDFLEVQKVYVLRRDRML 180

Query: 181 ARPFMGPDFRKLSGEIQTKFREFLAERGIDNELTLFLHEFMMNKDRCELIRWLGTVKSFV 240
           ARPFMGPDFRKLSGEIQTKFREFLAERGIDNELTLFLHEFMMNKDRCELIRWLGTVKSFV
Sbjct: 181 ARPFMGPDFRKLSGEIQTKFREFLAERGIDNELTLFLHEFMMNKDRCELIRWLGTVKSFV 240

Query: 241 ER 243
           ER
Sbjct: 241 ER 242

[Close]

BLAST of MS008544 vs. NCBI nr
Match: XP_038896995.1 (uncharacterized protein At2g39795, mitochondrial [Benincasa hispida] >XP_038896996.1 uncharacterized protein At2g39795, mitochondrial [Benincasa hispida])

HSP 1 Score: 437.2 bits (1123), Expect = 9.3e-119
Identity = 206/242 (85.12%), Postives = 228/242 (94.21%), Query Frame = 0


Query: 1   MSGVFRSAHREIRSSYSRIFNPRLWRRHCSPSRSTIISTSLFTRPFVSAANPKSPFDAIA 60
           MS VFRSAHR+IRSSY +I   RLW+RHCSPS+STIISTSLFTRPFVSAANPKSPFDAI 
Sbjct: 1   MSAVFRSAHRQIRSSYGKILTRRLWKRHCSPSQSTIISTSLFTRPFVSAANPKSPFDAIT 60

Query: 61  LRVLRNEIEYQSNYAPPHQPVTKFNSFSVEDRPGEQWITLRGKFMDTEEIKIEATMFDGC 120
           LRV+RNEIEYQS+YAPPHQP T FNSF+VED+PG QWITL+GKF DTE+IK+EATMFDGC
Sbjct: 61  LRVIRNEIEYQSDYAPPHQPATMFNSFTVEDQPGMQWITLKGKFGDTEDIKVEATMFDGC 120

Query: 121 ETVPRPGDDSDGEEDLRLHISVLVDISKGDGSDDLEFMCSAWPDSLEVQKVYVLRRDRML 180
           E+VP+ GDDSDGEEDLRLHISVLVDISKGDGS+DLEF+CSAWPDSLEVQK+YVL+RDRML
Sbjct: 121 ESVPKLGDDSDGEEDLRLHISVLVDISKGDGSEDLEFVCSAWPDSLEVQKLYVLKRDRML 180

Query: 181 ARPFMGPDFRKLSGEIQTKFREFLAERGIDNELTLFLHEFMMNKDRCELIRWLGTVKSFV 240
           ARP+MGPDFRKLSGE+QTKFR+FLAER ID EL +FLHE+MMNKDRCELIRWLGTVKSFV
Sbjct: 181 ARPYMGPDFRKLSGEMQTKFRKFLAERRIDKELAVFLHEYMMNKDRCELIRWLGTVKSFV 240

Query: 241 ER 243
           ER
Sbjct: 241 ER 242

[Close]

BLAST of MS008544 vs. NCBI nr
Match: KAG7037635.1 (putative protein, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 423.7 bits (1088), Expect = 1.1e-114
Identity = 205/242 (84.71%), Postives = 225/242 (92.98%), Query Frame = 0


Query: 1   MSGVFRSAHREIRSSYSRIFNPRLWRRHCSPSRSTIISTSLFTRPFVSAANPKSPFDAIA 60
           MS +FRS+HR+IR SYS  F  RL  RH SPSRSTIIS SLFTRPFVSAANPKSPFDAIA
Sbjct: 1   MSAIFRSSHRKIR-SYSNFFTRRLCCRHSSPSRSTIISKSLFTRPFVSAANPKSPFDAIA 60

Query: 61  LRVLRNEIEYQSNYAPPHQPVTKFNSFSVEDRPGEQWITLRGKFMDTEEIKIEATMFDGC 120
           LRVLRNEIEYQSNYAPPHQP T+F +FSVEDRPG QWITL+GKF DTE+IKIEATMFDGC
Sbjct: 61  LRVLRNEIEYQSNYAPPHQPATRFGAFSVEDRPGMQWITLKGKFGDTEDIKIEATMFDGC 120

Query: 121 ETVPRPGDDSDGEEDLRLHISVLVDISKGDGSDDLEFMCSAWPDSLEVQKVYVLRRDRML 180
           E+VP+ GDDSDGEEDLRLHISVLVDISKG+GS+DLEF+CSAWPDSLEVQK+YVL+RDR L
Sbjct: 121 ESVPKLGDDSDGEEDLRLHISVLVDISKGEGSEDLEFVCSAWPDSLEVQKLYVLKRDRTL 180

Query: 181 ARPFMGPDFRKLSGEIQTKFREFLAERGIDNELTLFLHEFMMNKDRCELIRWLGTVKSFV 240
           ARP+MGPDFRKLSG+IQTKFREFLAERGID EL++FLHE+MMNKDRCELIRWLGTV+SFV
Sbjct: 181 ARPYMGPDFRKLSGKIQTKFREFLAERGIDRELSMFLHEYMMNKDRCELIRWLGTVESFV 240

Query: 241 ER 243
           ER
Sbjct: 241 ER 241

[Close]

BLAST of MS008544 vs. NCBI nr
Match: XP_023524355.1 (uncharacterized protein At2g39795, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023524356.1 uncharacterized protein At2g39795, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 422.9 bits (1086), Expect = 1.8e-114
Identity = 204/242 (84.30%), Postives = 224/242 (92.56%), Query Frame = 0


Query: 1   MSGVFRSAHREIRSSYSRIFNPRLWRRHCSPSRSTIISTSLFTRPFVSAANPKSPFDAIA 60
           MS +FRS+HR+IR SYS  F  RLW RH SPSRSTIIS SLFTRPFVSAA PKSPFDAIA
Sbjct: 1   MSAIFRSSHRKIR-SYSTFFTRRLWCRHSSPSRSTIISKSLFTRPFVSAAYPKSPFDAIA 60

Query: 61  LRVLRNEIEYQSNYAPPHQPVTKFNSFSVEDRPGEQWITLRGKFMDTEEIKIEATMFDGC 120
           LRVLRNEIEYQSNYAPPHQP T+F +FSVEDRPG QWITL+GKF DTE+IKIEATMFDGC
Sbjct: 61  LRVLRNEIEYQSNYAPPHQPATRFGAFSVEDRPGMQWITLKGKFGDTEDIKIEATMFDGC 120

Query: 121 ETVPRPGDDSDGEEDLRLHISVLVDISKGDGSDDLEFMCSAWPDSLEVQKVYVLRRDRML 180
           E+VP+ GDDSDGEEDLRLHISVLVDISKG+GS+DLEF+CSAWPDSLEVQK+YVL+RD  L
Sbjct: 121 ESVPKLGDDSDGEEDLRLHISVLVDISKGEGSEDLEFVCSAWPDSLEVQKLYVLKRDMSL 180

Query: 181 ARPFMGPDFRKLSGEIQTKFREFLAERGIDNELTLFLHEFMMNKDRCELIRWLGTVKSFV 240
           ARP+MGPDFRKLSG+IQTKFREFLAERGID EL++FLHE+MMNKDRCELIRWLGTV+SFV
Sbjct: 181 ARPYMGPDFRKLSGKIQTKFREFLAERGIDKELSMFLHEYMMNKDRCELIRWLGTVESFV 240

Query: 241 ER 243
           ER
Sbjct: 241 ER 241

[Close]

BLAST of MS008544 vs. NCBI nr
Match: XP_022940105.1 (uncharacterized protein At2g39795, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 421.4 bits (1082), Expect = 5.3e-114
Identity = 204/242 (84.30%), Postives = 224/242 (92.56%), Query Frame = 0


Query: 1   MSGVFRSAHREIRSSYSRIFNPRLWRRHCSPSRSTIISTSLFTRPFVSAANPKSPFDAIA 60
           MS +FRS+HR+IR SYS  F  RL  RH SPSRSTIIS SLFTRPFVSAANPKSPFDAIA
Sbjct: 1   MSAIFRSSHRKIR-SYSNFFTHRLCCRHSSPSRSTIISKSLFTRPFVSAANPKSPFDAIA 60

Query: 61  LRVLRNEIEYQSNYAPPHQPVTKFNSFSVEDRPGEQWITLRGKFMDTEEIKIEATMFDGC 120
           LRVLRNEIEYQSNYAPPHQP T+F +FSVEDRPG QWITL+GKF DTE+IKIEATMFDGC
Sbjct: 61  LRVLRNEIEYQSNYAPPHQPATRFGAFSVEDRPGMQWITLKGKFGDTEDIKIEATMFDGC 120

Query: 121 ETVPRPGDDSDGEEDLRLHISVLVDISKGDGSDDLEFMCSAWPDSLEVQKVYVLRRDRML 180
           E+VP+ GDDSDGEEDLRLHISVLVDISKG+GS+DLE +CSAWPDSLEVQK+YVL+RDR L
Sbjct: 121 ESVPKLGDDSDGEEDLRLHISVLVDISKGEGSEDLELVCSAWPDSLEVQKLYVLKRDRTL 180

Query: 181 ARPFMGPDFRKLSGEIQTKFREFLAERGIDNELTLFLHEFMMNKDRCELIRWLGTVKSFV 240
           ARP+MGPDFRKLSG+IQTKFREFLAERGID EL++FLHE+MMNKDRCELIRWLGTV+SFV
Sbjct: 181 ARPYMGPDFRKLSGKIQTKFREFLAERGIDKELSMFLHEYMMNKDRCELIRWLGTVESFV 240

Query: 241 ER 243
           ER
Sbjct: 241 ER 241

[Close]

BLAST of MS008544 vs. ExPASy Swiss-Prot
Match: O94675 (Mitochondrial acidic protein mam33 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC776.07 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 8.4e-14
Identity = 62/234 (26.50%), Postives = 105/234 (44.87%), Query Frame = 0


Query: 38  STSLFTRPFVSAANPKSPFDAIALRVLRNEIEYQSNYAPPHQPVTKFNSFSVEDRPGEQW 97
           S S   R   +A NP+S      +  L +EI+Y+ N       +   N + +ED  G   
Sbjct: 43  SFSSIRRSSHTAGNPRSKL----INALSSEIDYEKNQVLSEISLPPVN-YDIEDVQGSAV 102

Query: 98  ITLRGKFMDTEEIKI----------------EATMFDGCETVPRPGDDSDGE---EDLRL 157
           + L+ K  D E I+I                + T F+  + +   G+ ++ E   EDL  
Sbjct: 103 VVLKAKHGD-ENIRITMNVSQDVTDAVPEEQDFTEFEDEQELQNQGESAEDEFPNEDLGR 162

Query: 158 HISVLVDISKGDGSDDLEFMCSAWPDSLEVQKVYVLRRDRMLA-----------RPFMGP 217
                ++ISK  G+  L F  +A  D  +++ +Y  +   ML            + ++GP
Sbjct: 163 FQPCTIEISK-PGNGALVFEATALDDGFDIENIYFSKDIDMLTSDSLEAEWKRRKQYLGP 222

Query: 218 DFRKLSGEIQTKFREFLAERGIDNELTLFLHEFMMNKDRCELIRWLGTVKSFVE 242
            F++L  E+Q  F  +L ER ID  L+ F+  F + K+  E I WL +V+ F++
Sbjct: 223 SFKELDPELQDLFHSYLEERKIDESLSSFIVSFGLTKELKEYINWLESVRQFLK 269

[Close]

BLAST of MS008544 vs. ExPASy TrEMBL
Match: A0A6J1D8I6 (uncharacterized protein At2g39795, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111018319 PE=4 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 6.3e-137
Identity = 241/242 (99.59%), Postives = 241/242 (99.59%), Query Frame = 0


Query: 1   MSGVFRSAHREIRSSYSRIFNPRLWRRHCSPSRSTIISTSLFTRPFVSAANPKSPFDAIA 60
           MSGVFRSAHREIRSSYSRIFNPRLWRRHCSPSRSTIISTSLFTRPFVSAANPKSPFDAIA
Sbjct: 1   MSGVFRSAHREIRSSYSRIFNPRLWRRHCSPSRSTIISTSLFTRPFVSAANPKSPFDAIA 60

Query: 61  LRVLRNEIEYQSNYAPPHQPVTKFNSFSVEDRPGEQWITLRGKFMDTEEIKIEATMFDGC 120
           LRVLRNEIEYQSNYAPPHQPVTKFNSFSVEDRPGEQWITLRGKFMDTEEIKIEATMFDGC
Sbjct: 61  LRVLRNEIEYQSNYAPPHQPVTKFNSFSVEDRPGEQWITLRGKFMDTEEIKIEATMFDGC 120

Query: 121 ETVPRPGDDSDGEEDLRLHISVLVDISKGDGSDDLEFMCSAWPDSLEVQKVYVLRRDRML 180
           ETVPRPGDDSDGEEDLRLHISVLVDISKGDGSDDLEFMCSAWPD LEVQKVYVLRRDRML
Sbjct: 121 ETVPRPGDDSDGEEDLRLHISVLVDISKGDGSDDLEFMCSAWPDFLEVQKVYVLRRDRML 180

Query: 181 ARPFMGPDFRKLSGEIQTKFREFLAERGIDNELTLFLHEFMMNKDRCELIRWLGTVKSFV 240
           ARPFMGPDFRKLSGEIQTKFREFLAERGIDNELTLFLHEFMMNKDRCELIRWLGTVKSFV
Sbjct: 181 ARPFMGPDFRKLSGEIQTKFREFLAERGIDNELTLFLHEFMMNKDRCELIRWLGTVKSFV 240

Query: 241 ER 243
           ER
Sbjct: 241 ER 242

[Close]

BLAST of MS008544 vs. ExPASy TrEMBL
Match: A0A6J1FPL2 (uncharacterized protein At2g39795, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111445825 PE=4 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 2.6e-114
Identity = 204/242 (84.30%), Postives = 224/242 (92.56%), Query Frame = 0


Query: 1   MSGVFRSAHREIRSSYSRIFNPRLWRRHCSPSRSTIISTSLFTRPFVSAANPKSPFDAIA 60
           MS +FRS+HR+IR SYS  F  RL  RH SPSRSTIIS SLFTRPFVSAANPKSPFDAIA
Sbjct: 1   MSAIFRSSHRKIR-SYSNFFTHRLCCRHSSPSRSTIISKSLFTRPFVSAANPKSPFDAIA 60

Query: 61  LRVLRNEIEYQSNYAPPHQPVTKFNSFSVEDRPGEQWITLRGKFMDTEEIKIEATMFDGC 120
           LRVLRNEIEYQSNYAPPHQP T+F +FSVEDRPG QWITL+GKF DTE+IKIEATMFDGC
Sbjct: 61  LRVLRNEIEYQSNYAPPHQPATRFGAFSVEDRPGMQWITLKGKFGDTEDIKIEATMFDGC 120

Query: 121 ETVPRPGDDSDGEEDLRLHISVLVDISKGDGSDDLEFMCSAWPDSLEVQKVYVLRRDRML 180
           E+VP+ GDDSDGEEDLRLHISVLVDISKG+GS+DLE +CSAWPDSLEVQK+YVL+RDR L
Sbjct: 121 ESVPKLGDDSDGEEDLRLHISVLVDISKGEGSEDLELVCSAWPDSLEVQKLYVLKRDRTL 180

Query: 181 ARPFMGPDFRKLSGEIQTKFREFLAERGIDNELTLFLHEFMMNKDRCELIRWLGTVKSFV 240
           ARP+MGPDFRKLSG+IQTKFREFLAERGID EL++FLHE+MMNKDRCELIRWLGTV+SFV
Sbjct: 181 ARPYMGPDFRKLSGKIQTKFREFLAERGIDKELSMFLHEYMMNKDRCELIRWLGTVESFV 240

Query: 241 ER 243
           ER
Sbjct: 241 ER 241

[Close]

BLAST of MS008544 vs. ExPASy TrEMBL
Match: A0A6J1IUX2 (uncharacterized protein At2g39795, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111480818 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.7e-113
Identity = 203/242 (83.88%), Postives = 223/242 (92.15%), Query Frame = 0


Query: 1   MSGVFRSAHREIRSSYSRIFNPRLWRRHCSPSRSTIISTSLFTRPFVSAANPKSPFDAIA 60
           M  +FRS+HR+IR SYS  F  RL  RH SPSRSTIISTS FTRPFVSAANPKSPFDAIA
Sbjct: 1   MLAIFRSSHRKIR-SYSNFFTRRLCCRHSSPSRSTIISTSPFTRPFVSAANPKSPFDAIA 60

Query: 61  LRVLRNEIEYQSNYAPPHQPVTKFNSFSVEDRPGEQWITLRGKFMDTEEIKIEATMFDGC 120
           LRVLRNEIEYQSNYAPPHQP T+F +FSVEDRPG QWITL+GKF DTE+IKIEATMFDGC
Sbjct: 61  LRVLRNEIEYQSNYAPPHQPATRFGAFSVEDRPGMQWITLKGKFGDTEDIKIEATMFDGC 120

Query: 121 ETVPRPGDDSDGEEDLRLHISVLVDISKGDGSDDLEFMCSAWPDSLEVQKVYVLRRDRML 180
           E+VP+ GDDSDGEEDLRLHISVLVDISKG+GS+DLEF+CSAWPDSLEVQK+YVL+RDR L
Sbjct: 121 ESVPKLGDDSDGEEDLRLHISVLVDISKGEGSEDLEFVCSAWPDSLEVQKLYVLKRDRTL 180

Query: 181 ARPFMGPDFRKLSGEIQTKFREFLAERGIDNELTLFLHEFMMNKDRCELIRWLGTVKSFV 240
           ARP+MGPDFRKLSG+IQTKFREFLAERGID EL++FLHE+MMNKDRCELIRWLG V+SFV
Sbjct: 181 ARPYMGPDFRKLSGKIQTKFREFLAERGIDKELSMFLHEYMMNKDRCELIRWLGIVESFV 240

Query: 241 ER 243
           ER
Sbjct: 241 ER 241

[Close]

BLAST of MS008544 vs. ExPASy TrEMBL
Match: A0A6J1FEC0 (mitochondrial acidic protein mam33-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443189 PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 4.1e-112
Identity = 198/242 (81.82%), Postives = 220/242 (90.91%), Query Frame = 0


Query: 1   MSGVFRSAHREIRSSYSRIFNPRLWRRHCSPSRSTIISTSLFTRPFVSAANPKSPFDAIA 60
           M+GVFRSAHR IRSSYS+I   RLWRRHCSPS+STIISTSLFTR FVSAANPKS FDAI 
Sbjct: 1   MAGVFRSAHRRIRSSYSKILTRRLWRRHCSPSQSTIISTSLFTRSFVSAANPKSTFDAIT 60

Query: 61  LRVLRNEIEYQSNYAPPHQPVTKFNSFSVEDRPGEQWITLRGKFMDTEEIKIEATMFDGC 120
           LRVLRNEIEYQS+YAPPH P  +FNSF+VEDRPG QWITL+GKF DTE+IKIEATMFDGC
Sbjct: 61  LRVLRNEIEYQSDYAPPHLPAMRFNSFAVEDRPGMQWITLKGKFGDTEDIKIEATMFDGC 120

Query: 121 ETVPRPGDDSDGEEDLRLHISVLVDISKGDGSDDLEFMCSAWPDSLEVQKVYVLRRDRML 180
           ++VP+ GDD DGEEDLRLH SVLVDISK DGSD LEF+CSAWPDSLE+QK+YVL+RDRML
Sbjct: 121 KSVPKLGDDIDGEEDLRLHSSVLVDISKRDGSDYLEFVCSAWPDSLEIQKLYVLKRDRML 180

Query: 181 ARPFMGPDFRKLSGEIQTKFREFLAERGIDNELTLFLHEFMMNKDRCELIRWLGTVKSFV 240
           +RP+MGPDFR+LS EIQT+FREFLAER ID EL +FLHE+MMNKDRCELIRWL TVK+FV
Sbjct: 181 SRPYMGPDFRELSSEIQTEFREFLAERRIDKELAVFLHEYMMNKDRCELIRWLATVKTFV 240

Query: 241 ER 243
           ER
Sbjct: 241 ER 242

[Close]

BLAST of MS008544 vs. ExPASy TrEMBL
Match: A0A0A0L152 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652120 PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 3.5e-111
Identity = 195/242 (80.58%), Postives = 217/242 (89.67%), Query Frame = 0


Query: 1   MSGVFRSAHREIRSSYSRIFNPRLWRRHCSPSRSTIISTSLFTRPFVSAANPKSPFDAIA 60
           MS VFRSAHR+ +S YS+I   RLW RHCSPSR+T IS SLFTRPFVS+A PKSPFDAI 
Sbjct: 1   MSAVFRSAHRQFQSYYSKILTRRLWERHCSPSRTTTISASLFTRPFVSSAVPKSPFDAIT 60

Query: 61  LRVLRNEIEYQSNYAPPHQPVTKFNSFSVEDRPGEQWITLRGKFMDTEEIKIEATMFDGC 120
           LRVLRNEIEYQS+YAPPHQP T FNSF+VED PG QWITL+GKF DTE+IKIEATMFDGC
Sbjct: 61  LRVLRNEIEYQSSYAPPHQPATMFNSFTVEDHPGMQWITLKGKFKDTEDIKIEATMFDGC 120

Query: 121 ETVPRPGDDSDGEEDLRLHISVLVDISKGDGSDDLEFMCSAWPDSLEVQKVYVLRRDRML 180
           E+VP+ GDD +GEEDLRLHISVLVDISKGDGS+DLEF+CSAWPDSL+VQK+YVL+RDRML
Sbjct: 121 ESVPKFGDDCEGEEDLRLHISVLVDISKGDGSEDLEFVCSAWPDSLDVQKLYVLKRDRML 180

Query: 181 ARPFMGPDFRKLSGEIQTKFREFLAERGIDNELTLFLHEFMMNKDRCELIRWLGTVKSFV 240
           A  +MGPDFRKLSG IQTKFREFLAERGID EL +FLHE+MMNKDRCELIRW  +V+SFV
Sbjct: 181 ASHYMGPDFRKLSGAIQTKFREFLAERGIDKELAVFLHEYMMNKDRCELIRWFKSVESFV 240

Query: 241 ER 243
           ER
Sbjct: 241 ER 242

[Close]

BLAST of MS008544 vs. TAIR 10
Match: AT4G31930.1 (Mitochondrial glycoprotein family protein )

HSP 1 Score: 248.4 bits (633), Expect = 5.7e-66
Identity = 116/196 (59.18%), Postives = 152/196 (77.55%), Query Frame = 0


Query: 47  VSAANPKSPFDAIALRVLRNEIEYQSNYAPPHQPVTKFNSFSVEDRPGEQWITLRGKFMD 106
           V+ +  KSPF +  LR++RNEIEYQS+YAPPHQP T+F SFSVED PGEQ I ++GKF +
Sbjct: 40  VTTSPAKSPFRSNILRIIRNEIEYQSDYAPPHQPATEFKSFSVEDCPGEQCIVMKGKFGE 99

Query: 107 TEEIKIEATMFDGCETVPRPGDDSDGEEDLRLHISVLVDISKGDGSDDLEFMCSAWPDSL 166
            E+IK+EATMFDG   VPR G D+ G  D+RLHIS+LVDISK DGS+++EF+CS WP+ +
Sbjct: 100 DEDIKMEATMFDGFMNVPRAGLDASG-HDVRLHISLLVDISKVDGSEEIEFLCSVWPNRI 159

Query: 167 EVQKVYVLRRDRMLARPFMGPDFRKLSGEIQTKFREFLAERGIDNELTLFLHEFMMNKDR 226
           E++K+Y LRR+++  +P+MGP+F  L  + QT  REFL  RGID EL  FLHE+MMNKDR
Sbjct: 160 EIRKLYKLRRNKITGQPYMGPNFGNLKYDFQTAIREFLRVRGIDAELCFFLHEYMMNKDR 219

Query: 227 CELIRWLGTVKSFVER 243
            ELI+WL  + SF+ +
Sbjct: 220 IELIQWLRKLNSFISQ 234

[Close]

BLAST of MS008544 vs. TAIR 10
Match: AT1G15870.1 (Mitochondrial glycoprotein family protein )

HSP 1 Score: 190.7 bits (483), Expect = 1.4e-48
Identity = 98/227 (43.17%), Postives = 150/227 (66.08%), Query Frame = 0


Query: 21  NPRLWRRHCSPSRSTIISTSLFTRPFVSAAN-----PKSPFDAIALRVLRNEIEYQSNYA 80
           NPR+    C  S  + I  S  +R F+S+ +      ++ F+   LR++R EI+ + +++
Sbjct: 24  NPRI----CVQSNQSYIFLS--SRKFLSSGSYVSEMRRTAFEGNILRLIRLEIQSELDHS 83

Query: 81  PPHQPVTKFNSFSVEDRPGEQWITLRGKFMDTEEIKIEATMFDGCETVPRPGDDSDGEED 140
           P  QP   F  F+V++RPGEQWI+LR KF + E+IKIEATMFDG  +VP     +   ED
Sbjct: 84  PILQPEESFGPFTVDERPGEQWISLRRKFGEKEDIKIEATMFDG--SVPSSKSTTSDPED 143

Query: 141 LRLHISVLVDISKGDGSDDLEFMCSAWPDSLEVQKVYVLRRDRMLARPFMGPDFRKLSGE 200
           ++LHI+ +V+ISKGDG + LE MCSAWPD++++ K +V +  +     ++GP+F+++  E
Sbjct: 144 VQLHITFIVNISKGDG-ETLEIMCSAWPDTIQITKFFVRKSSQNSPNAYIGPEFQEMEDE 203

Query: 201 IQTKFREFLAERGIDNELTLFLHEFMMNKDRCELIRWLGTVKSFVER 243
           +Q     FL ERGI ++L  FLH++M NKD+ E IRW+ TVKS+VE+
Sbjct: 204 LQDSVYRFLEERGISDDLAEFLHQYMKNKDKAEYIRWMETVKSYVEQ 241

[Close]

BLAST of MS008544 vs. TAIR 10
Match: AT1G80720.1 (Mitochondrial glycoprotein family protein )

HSP 1 Score: 182.6 bits (462), Expect = 3.9e-46
Identity = 87/190 (45.79%), Postives = 127/190 (66.84%), Query Frame = 0


Query: 53  KSPFDAIALRVLRNEIEYQSNYAPPHQPVTKFNSFSVEDRPGEQWITLRGKFMDTEEIKI 112
           KS F    LR++RNEIEY+ +++PP QP   F  F+V++RPGEQWI+L+  F D E+IKI
Sbjct: 3   KSAFQGNILRLIRNEIEYELDHSPPLQPPNSFGPFTVDERPGEQWISLKRNFGDKEDIKI 62

Query: 113 EATMFDGCETVPRPGDDSDGEEDLRLHISVLVDISKGDGSDDLEFMCSAWPDSLEVQKVY 172
           EATMFD   +VP     +  E +  LHI+ +V+ISK   ++ LE MCSAWPD++E+ K+ 
Sbjct: 63  EATMFD--RSVP-TSKSTKTEPEYILHITFIVNISKAGATEALEIMCSAWPDTIEISKLC 122

Query: 173 VLRRDRMLARPFMGPDFRKLSGEIQTKFREFLAERGIDNELTLFLHEFMMNKDRCELIRW 232
           + R        + GP+F +L  ++Q    +FL ERGI +EL +FLH +M NK + E +RW
Sbjct: 123 IRRGINTSPSSYGGPEFEELDDQLQDALYQFLEERGISDELAVFLHRYMKNKGKAEYVRW 182

Query: 233 LGTVKSFVER 243
           + +VKS+VE+
Sbjct: 183 MESVKSYVEQ 189

[Close]

BLAST of MS008544 vs. TAIR 10
Match: AT5G05990.1 (Mitochondrial glycoprotein family protein )

HSP 1 Score: 92.8 bits (229), Expect = 4.0e-19
Identity = 69/233 (29.61%), Postives = 113/233 (48.50%), Query Frame = 0


Query: 26  RRHCSPSRSTIISTSLFTRPFVSAANPKSPFDAIALRVLRNEIEYQSNYAPPH--QPVTK 85
           RRH +PS    +    FT      A+P  P     LR++  EI Y       H  +    
Sbjct: 35  RRHLTPSVDRNVP---FTTSTKKRASPTDPL----LRIIEEEIGYAEKADDYHRVEETPS 94

Query: 86  FNSFSVEDRPGEQWITLRGKFMDTEEIKIEATMF--------DGCETVPRPGDDSDGEED 145
              F +ED+PG + +TL  ++ + E +K+E  M         D  +      ++ D +ED
Sbjct: 95  GFPFEMEDKPGGKIVTLTREY-EGETVKVEVHMTNLVTGDKEDDEDDEEEAENEEDEDED 154

Query: 146 LRL-----HISVLVDISKGDGSDDLEFMCSAWPDSLEVQKVYVLRRD--RMLARPFMGPD 205
             L     ++ +LV +SK  G   LEF C+A+PD + ++ ++V   D        + GP 
Sbjct: 155 KPLKPKQSNVPLLVTLSKKTG-PSLEFRCTAFPDRIAIKDMWVTFPDDPSKDELAYEGPS 214

Query: 206 FRKLSGEIQTKFREFLAERGIDNELTLFLHEFMMNKDRCELIRWLGTVKSFVE 242
           FR L  +++  F  ++  RGI   +  FLHE+M+NKD  E + WL ++K+FV+
Sbjct: 215 FRVLDEKLRKAFHRYIEIRGIKPSMINFLHEYMINKDSREHLLWLKSLKNFVK 258

[Close]

BLAST of MS008544 vs. TAIR 10
Match: AT5G02050.1 (Mitochondrial glycoprotein family protein )

HSP 1 Score: 89.0 bits (219), Expect = 5.8e-18
Identity = 75/254 (29.53%), Postives = 117/254 (46.06%), Query Frame = 0


Query: 5   FRSAHREIRSSYSRIFNPRLWRRHCSPSRSTIISTSLFTRPFVSAANPKSPFDAIALRVL 64
           FR+    +      +   RL R      R ++ S S+ +    SA + K+  D   + V+
Sbjct: 19  FRAGRSPVSFRSGAVSVERLIRGSHQIRRGSVSSFSVSSFSTESAIS-KTTADENLVSVI 78

Query: 65  RNEIEYQSNYAPPH-----QPVTKFNSFSVEDRPGEQWITLRGKFMDTEEIKIEATMF-- 124
            +EIE       PH     +   +   F + D  GE+ + L  KF D E I++E      
Sbjct: 79  ESEIECAVAEEAPHDTDFLEDKPEGFPFEIIDNSGERTVLLTRKFED-ETIQVEVDSVAS 138

Query: 125 ---DGCETVPRPG---DDSDGEEDLRLHISVLVDISKGDGSDDLEFMCSAWPDSLEVQKV 184
              +  E    P    DD D E   ++ + ++V + KGDG   LEF  SA+PD + +  +
Sbjct: 139 YDDEDEEEEAEPNNEEDDEDQESSGKVRVPMVVSVQKGDGV-CLEFGVSAYPDEIVIDSL 198

Query: 185 YVLR---RDRMLARPFMGPDFRKLSGEIQTKFREFLAERGIDNELTLFLHEFMMNKDRCE 243
            + +    D  LA  + GPDF  L   +Q  F  +L  RGI    T FL +++ NKD  E
Sbjct: 199 SIKQPQGSDNDLA--YEGPDFDDLDENLQKAFHRYLEIRGIKPSFTTFLADYVANKDSRE 258

The following BLAST results are available for this feature:

BLAST of MS008544 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150088.1	1.3e-136	99.59	uncharacterized protein At2g39795, mitochondrial [Momordica charantia]	[more]
XP_038896995.1	9.3e-119	85.12	uncharacterized protein At2g39795, mitochondrial [Benincasa hispida] >XP_0388969...	[more]
KAG7037635.1	1.1e-114	84.71	putative protein, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023524355.1	1.8e-114	84.30	uncharacterized protein At2g39795, mitochondrial-like [Cucurbita pepo subsp. pep...	[more]
XP_022940105.1	5.3e-114	84.30	uncharacterized protein At2g39795, mitochondrial-like [Cucurbita moschata]	[more]

BLAST of MS008544 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O94675	8.4e-14	26.50	Mitochondrial acidic protein mam33 OS=Schizosaccharomyces pombe (strain 972 / AT...	[more]

BLAST of MS008544 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D8I6	6.3e-137	99.59	uncharacterized protein At2g39795, mitochondrial OS=Momordica charantia OX=3673 ...	[more]
A0A6J1FPL2	2.6e-114	84.30	uncharacterized protein At2g39795, mitochondrial-like OS=Cucurbita moschata OX=3...	[more]
A0A6J1IUX2	1.7e-113	83.88	uncharacterized protein At2g39795, mitochondrial-like OS=Cucurbita maxima OX=366...	[more]
A0A6J1FEC0	4.1e-112	81.82	mitochondrial acidic protein mam33-like isoform X1 OS=Cucurbita moschata OX=3662...	[more]
A0A0A0L152	3.5e-111	80.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652120 PE=4 SV=1	[more]

BLAST of MS008544 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31930.1	5.7e-66	59.18	Mitochondrial glycoprotein family protein	[more]
AT1G15870.1	1.4e-48	43.17	Mitochondrial glycoprotein family protein	[more]
AT1G80720.1	3.9e-46	45.79	Mitochondrial glycoprotein family protein	[more]
AT5G05990.1	4.0e-19	29.61	Mitochondrial glycoprotein family protein	[more]
AT5G02050.1	5.8e-18	29.53	Mitochondrial glycoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036561	Mitochondrial glycoprotein superfamily	GENE3D	3.10.280.10	Mitochondrial glycoprotein	coord: 59..240 e-value: 4.4E-45 score: 155.9
IPR036561	Mitochondrial glycoprotein superfamily	SUPERFAMILY	54529	Mitochondrial glycoprotein MAM33-like	coord: 61..241
IPR003428	Mitochondrial glycoprotein	PFAM	PF02330	MAM33	coord: 65..240 e-value: 4.1E-26 score: 92.3
IPR003428	Mitochondrial glycoprotein	PANTHER	PTHR10826	COMPLEMENT COMPONENT 1	coord: 1..241
None	No IPR available	PANTHER	PTHR10826:SF14	BNAA03G51840D PROTEIN	coord: 1..241

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS008544.1	MS008544.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005759	mitochondrial matrix