MS008533 (gene) Bitter gourd (TR) v1

Overview


Name	MS008533
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Serine-rich protein
Location	scaffold4: 2025809 .. 2026450 (+)
RNA-Seq Expression	MS008533
Synteny	MS008533

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGACTTCATCTTCTTCCTCGAAAACCAGATCCAGCGGCCCGGTGATCCGATCACTCTCGCCGGGCGGCAGGTTCTGTAACTCCCCTTCTTTGTCGTCTTCTACATCGGCTTTTGCTTCCTCCACTAGCTCAAGCTTTTACTCCTCTTCCTCCGCTTTCCGTCACGATGACCATCGTGATTTCCGCAGCCATCATCAACCTCGATCCACCTCTCCCAGCCGTGTTAACGTTTATTCATCTCCTTCACTTGCTCCTTCTGTCCGTTTCTTTATCGATAACCGTTCCATTTCTCCGAATCGATCCGTTATTGTTTCCAGGAAGAATCGTCCGGTTTCTAATGTTAAGAAGACCTGTATGTGCTCTCCGACGACGCATCCAGGCTCTTTCCGGTGCAGTCTCCATAAGAATGTTTCCAGTAGCGGAGGCCACGGGCAGTCGGTGTCGTTTCCTTCTACCAGGTTGAATATGCGGAGATCGGCTATGGCGAACTCGCTTGTTCGAATCGGCGGAGTGGAAGGGGAATGGATGAAGAGAGCATTGACGACTCTGATTCGGCCTTCTTCGCACCAGCAGAGGAGGAGAGCGGCGTTCCAACCGAGATCCAGTCGGCTCTCGGTCATGTCCAAAGCCGACGATGCG

mRNA sequence

ATGGTGACTTCATCTTCTTCCTCGAAAACCAGATCCAGCGGCCCGGTGATCCGATCACTCTCGCCGGGCGGCAGGTTCTGTAACTCCCCTTCTTTGTCGTCTTCTACATCGGCTTTTGCTTCCTCCACTAGCTCAAGCTTTTACTCCTCTTCCTCCGCTTTCCGTCACGATGACCATCGTGATTTCCGCAGCCATCATCAACCTCGATCCACCTCTCCCAGCCGTGTTAACGTTTATTCATCTCCTTCACTTGCTCCTTCTGTCCGTTTCTTTATCGATAACCGTTCCATTTCTCCGAATCGATCCGTTATTGTTTCCAGGAAGAATCGTCCGGTTTCTAATGTTAAGAAGACCTGTATGTGCTCTCCGACGACGCATCCAGGCTCTTTCCGGTGCAGTCTCCATAAGAATGTTTCCAGTAGCGGAGGCCACGGGCAGTCGGTGTCGTTTCCTTCTACCAGGTTGAATATGCGGAGATCGGCTATGGCGAACTCGCTTGTTCGAATCGGCGGAGTGGAAGGGGAATGGATGAAGAGAGCATTGACGACTCTGATTCGGCCTTCTTCGCACCAGCAGAGGAGGAGAGCGGCGTTCCAACCGAGATCCAGTCGGCTCTCGGTCATGTCCAAAGCCGACGATGCG

Coding sequence (CDS)

ATGGTGACTTCATCTTCTTCCTCGAAAACCAGATCCAGCGGCCCGGTGATCCGATCACTCTCGCCGGGCGGCAGGTTCTGTAACTCCCCTTCTTTGTCGTCTTCTACATCGGCTTTTGCTTCCTCCACTAGCTCAAGCTTTTACTCCTCTTCCTCCGCTTTCCGTCACGATGACCATCGTGATTTCCGCAGCCATCATCAACCTCGATCCACCTCTCCCAGCCGTGTTAACGTTTATTCATCTCCTTCACTTGCTCCTTCTGTCCGTTTCTTTATCGATAACCGTTCCATTTCTCCGAATCGATCCGTTATTGTTTCCAGGAAGAATCGTCCGGTTTCTAATGTTAAGAAGACCTGTATGTGCTCTCCGACGACGCATCCAGGCTCTTTCCGGTGCAGTCTCCATAAGAATGTTTCCAGTAGCGGAGGCCACGGGCAGTCGGTGTCGTTTCCTTCTACCAGGTTGAATATGCGGAGATCGGCTATGGCGAACTCGCTTGTTCGAATCGGCGGAGTGGAAGGGGAATGGATGAAGAGAGCATTGACGACTCTGATTCGGCCTTCTTCGCACCAGCAGAGGAGGAGAGCGGCGTTCCAACCGAGATCCAGTCGGCTCTCGGTCATGTCCAAAGCCGACGATGCG

Protein sequence

MVTSSSSSKTRSSGPVIRSLSPGGRFCNSPSLSSSTSAFASSTSSSFYSSSSAFRHDDHRDFRSHHQPRSTSPSRVNVYSSPSLAPSVRFFIDNRSISPNRSVIVSRKNRPVSNVKKTCMCSPTTHPGSFRCSLHKNVSSSGGHGQSVSFPSTRLNMRRSAMANSLVRIGGVEGEWMKRALTTLIRPSSHQQRRRAAFQPRSSRLSVMSKADDA

Homology

[Close]

BLAST of MS008533 vs. NCBI nr
Match: XP_022142372.1 (uncharacterized protein DDB_G0271670 [Momordica charantia])

HSP 1 Score: 399.8 bits (1026), Expect = 1.5e-107
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVIRSLSPGGRFCNSPSLSSSTSAFASSTSSSFYSSSSAFRHDDHR 60
           MVTSSSSSKTRSSGPVIRSLSPGGRFCNSPSLSSSTSAFASSTSSSFYSSSSAFRHDDHR
Sbjct: 1   MVTSSSSSKTRSSGPVIRSLSPGGRFCNSPSLSSSTSAFASSTSSSFYSSSSAFRHDDHR 60

Query: 61  DFRSHHQPRSTSPSRVNVYSSPSLAPSVRFFIDNRSISPNRSVIVSRKNRPVSNVKKTCM 120
           DFRSHHQPRSTSPSRVNVYSSPSLAPSVRFFIDNRSISPNRSVIVSRKNRPVSNVKKTCM
Sbjct: 61  DFRSHHQPRSTSPSRVNVYSSPSLAPSVRFFIDNRSISPNRSVIVSRKNRPVSNVKKTCM 120

Query: 121 CSPTTHPGSFRCSLHKNVSSSGGHGQSVSFPSTRLNMRRSAMANSLVRIGGVEGEWMKRA 180
           CSPTTHPGSFRCSLHKNVSSSGGHGQSVSFPSTRLNMRRSAMANSLVRIGGVEGEWMKRA
Sbjct: 121 CSPTTHPGSFRCSLHKNVSSSGGHGQSVSFPSTRLNMRRSAMANSLVRIGGVEGEWMKRA 180

Query: 181 LTTLIRPSSHQQRRRAAFQPRSSRLSVMSKADDA 215
           LTTLIRPSSHQQRRRAAFQPRSSRLSVMSKADDA
Sbjct: 181 LTTLIRPSSHQQRRRAAFQPRSSRLSVMSKADDA 214

[Close]

BLAST of MS008533 vs. NCBI nr
Match: XP_038899899.1 (uncharacterized protein LOC120087091 [Benincasa hispida])

HSP 1 Score: 359.0 bits (920), Expect = 2.8e-95
Identity = 197/215 (91.63%), Postives = 205/215 (95.35%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVIRSLSPGGRFCNSPSLSSSTSAFASSTSSSFYSSSSAFRHDDHR 60
           MVTSSSSSKTRSSGPV+RSLSPGGRFCNSPSLSSSTSAFAS  SSSFYSSSS FRHDDHR
Sbjct: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFAS--SSSFYSSSSTFRHDDHR 60

Query: 61  DFRSH-HQPRSTSPSRVNVYSSPSLAPSVRFFIDNRSISPNRSVIVSRKNRPVSNVKKTC 120
           DFRSH HQPRSTSPSRVNVYSSPSL PSVRFFIDNRS SPNRSVIVSRK+RPVSNVK+TC
Sbjct: 61  DFRSHNHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSVIVSRKSRPVSNVKRTC 120

Query: 121 MCSPTTHPGSFRCSLHKNVSSSGGHGQSVSFPSTRLNMRRSAMANSLVRIGGVEGEWMKR 180
           MCSPTTHPGSFRCSLHKNV+SSG H Q+VSFPSTRLNM RSAMANS+VRIGGVEGE +KR
Sbjct: 121 MCSPTTHPGSFRCSLHKNVTSSGDHSQAVSFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180

Query: 181 ALTTLIRPSSHQQRRRAAFQPRSSRLSVMSKADDA 215
           ALTTLIRPSSHQQRRRAAFQPRSSRLSVMSKAD+A
Sbjct: 181 ALTTLIRPSSHQQRRRAAFQPRSSRLSVMSKADEA 213

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BLAST of MS008533 vs. NCBI nr
Match: XP_008452898.1 (PREDICTED: putative protein TPRXL [Cucumis melo] >ADN34124.1 serine-rich protein [Cucumis melo subsp. melo])

HSP 1 Score: 354.8 bits (909), Expect = 5.4e-94
Identity = 196/215 (91.16%), Postives = 201/215 (93.49%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVIRSLSPGGRFCNSPSLSSSTSAFASSTSSSFYSSSSAFRHDDHR 60
           MVTSSSSSKTRSSGPV+RSLSPGGRFCNSPSLSSS SAFAS  SSSFYSSSS FRHDDHR
Sbjct: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSPSAFAS--SSSFYSSSSTFRHDDHR 60

Query: 61  DFRSH-HQPRSTSPSRVNVYSSPSLAPSVRFFIDNRSISPNRSVIVSRKNRPVSNVKKTC 120
           DF +H HQ RSTSPSRVNVYSSPSL PSVRFFIDNRS SPNRSVIVSRKNRPVSNVK+TC
Sbjct: 61  DFPTHNHQTRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTC 120

Query: 121 MCSPTTHPGSFRCSLHKNVSSSGGHGQSVSFPSTRLNMRRSAMANSLVRIGGVEGEWMKR 180
           MCSPTTHPGSFRCSLHKNVSS GGH Q VSFPSTRLNM RSAMANS+VRIGGVEGE +KR
Sbjct: 121 MCSPTTHPGSFRCSLHKNVSSGGGHSQMVSFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180

Query: 181 ALTTLIRPSSHQQRRRAAFQPRSSRLSVMSKADDA 215
           ALTTLIRPSSHQQRRRAAFQPRSSRLSVMSKADDA
Sbjct: 181 ALTTLIRPSSHQQRRRAAFQPRSSRLSVMSKADDA 213

[Close]

BLAST of MS008533 vs. NCBI nr
Match: XP_022937125.1 (uncharacterized protein LOC111443517 [Cucurbita moschata] >KAG7024442.1 hypothetical protein SDJN02_13257, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 352.4 bits (903), Expect = 2.7e-93
Identity = 193/215 (89.77%), Postives = 201/215 (93.49%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVIRSLSPGGRFCNSPSLSSSTSAFASSTSSSFYSSSSAFRHDDHR 60
           MVTSSSSSKTRSSGPV+RS SPGGRFCNS SLSSS SAFASSTSS+FYSS+S FR DDHR
Sbjct: 1   MVTSSSSSKTRSSGPVLRSHSPGGRFCNSSSLSSSMSAFASSTSSNFYSSTSTFRDDDHR 60

Query: 61  DFRS-HHQPRSTSPSRVNVYSSPSLAPSVRFFIDNRSISPNRSVIVSRKNRPVSNVKKTC 120
            FRS HHQPRSTSPSRVNVYSSPSL PSVRFFIDNRS SPNRSVIVSRKNRPVSNVK+TC
Sbjct: 61  GFRSHHHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTC 120

Query: 121 MCSPTTHPGSFRCSLHKNVSSSGGHGQSVSFPSTRLNMRRSAMANSLVRIGGVEGEWMKR 180
           MCSPTTHPGSFRCSLHKNVSSSG H Q+ SFPSTRLNM RSAMANS+VRIGGVEGE +KR
Sbjct: 121 MCSPTTHPGSFRCSLHKNVSSSGSHSQAASFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180

Query: 181 ALTTLIRPSSHQQRRRAAFQPRSSRLSVMSKADDA 215
           ALTTLIRPSSHQQRRRA+FQPRSSRLSVMSKADDA
Sbjct: 181 ALTTLIRPSSHQQRRRASFQPRSSRLSVMSKADDA 215

[Close]

BLAST of MS008533 vs. NCBI nr
Match: XP_023536440.1 (uncharacterized serine-rich protein C215.13 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 352.1 bits (902), Expect = 3.5e-93
Identity = 193/215 (89.77%), Postives = 200/215 (93.02%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVIRSLSPGGRFCNSPSLSSSTSAFASSTSSSFYSSSSAFRHDDHR 60
           MVTSSSSSKTRSSGPV+RS SPGGRFCNS SLSSS SAFASSTSS+FYSS+S FR DDHR
Sbjct: 1   MVTSSSSSKTRSSGPVLRSHSPGGRFCNSSSLSSSMSAFASSTSSNFYSSTSTFRDDDHR 60

Query: 61  DFRS-HHQPRSTSPSRVNVYSSPSLAPSVRFFIDNRSISPNRSVIVSRKNRPVSNVKKTC 120
            FRS HHQPRSTSPSRVNVYSSPSL PSVRFFIDNRS SPNRS IVSRKNRPVSNVK+TC
Sbjct: 61  GFRSHHHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSAIVSRKNRPVSNVKRTC 120

Query: 121 MCSPTTHPGSFRCSLHKNVSSSGGHGQSVSFPSTRLNMRRSAMANSLVRIGGVEGEWMKR 180
           MCSPTTHPGSFRCSLHKNVSSSG H QS SFPSTRLNM RSAMANS+VRIGGVEGE +KR
Sbjct: 121 MCSPTTHPGSFRCSLHKNVSSSGSHSQSASFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180

Query: 181 ALTTLIRPSSHQQRRRAAFQPRSSRLSVMSKADDA 215
           ALTTLIRPSSHQQRRRA+FQPRSSRLSVMSKADDA
Sbjct: 181 ALTTLIRPSSHQQRRRASFQPRSSRLSVMSKADDA 215

[Close]

BLAST of MS008533 vs. ExPASy TrEMBL
Match: A0A6J1CMK2 (uncharacterized protein DDB_G0271670 OS=Momordica charantia OX=3673 GN=LOC111012506 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 7.1e-108
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVIRSLSPGGRFCNSPSLSSSTSAFASSTSSSFYSSSSAFRHDDHR 60
           MVTSSSSSKTRSSGPVIRSLSPGGRFCNSPSLSSSTSAFASSTSSSFYSSSSAFRHDDHR
Sbjct: 1   MVTSSSSSKTRSSGPVIRSLSPGGRFCNSPSLSSSTSAFASSTSSSFYSSSSAFRHDDHR 60

Query: 61  DFRSHHQPRSTSPSRVNVYSSPSLAPSVRFFIDNRSISPNRSVIVSRKNRPVSNVKKTCM 120
           DFRSHHQPRSTSPSRVNVYSSPSLAPSVRFFIDNRSISPNRSVIVSRKNRPVSNVKKTCM
Sbjct: 61  DFRSHHQPRSTSPSRVNVYSSPSLAPSVRFFIDNRSISPNRSVIVSRKNRPVSNVKKTCM 120

Query: 121 CSPTTHPGSFRCSLHKNVSSSGGHGQSVSFPSTRLNMRRSAMANSLVRIGGVEGEWMKRA 180
           CSPTTHPGSFRCSLHKNVSSSGGHGQSVSFPSTRLNMRRSAMANSLVRIGGVEGEWMKRA
Sbjct: 121 CSPTTHPGSFRCSLHKNVSSSGGHGQSVSFPSTRLNMRRSAMANSLVRIGGVEGEWMKRA 180

Query: 181 LTTLIRPSSHQQRRRAAFQPRSSRLSVMSKADDA 215
           LTTLIRPSSHQQRRRAAFQPRSSRLSVMSKADDA
Sbjct: 181 LTTLIRPSSHQQRRRAAFQPRSSRLSVMSKADDA 214

[Close]

BLAST of MS008533 vs. ExPASy TrEMBL
Match: E5GCC5 (Serine-rich protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 2.6e-94
Identity = 196/215 (91.16%), Postives = 201/215 (93.49%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVIRSLSPGGRFCNSPSLSSSTSAFASSTSSSFYSSSSAFRHDDHR 60
           MVTSSSSSKTRSSGPV+RSLSPGGRFCNSPSLSSS SAFAS  SSSFYSSSS FRHDDHR
Sbjct: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSPSAFAS--SSSFYSSSSTFRHDDHR 60

Query: 61  DFRSH-HQPRSTSPSRVNVYSSPSLAPSVRFFIDNRSISPNRSVIVSRKNRPVSNVKKTC 120
           DF +H HQ RSTSPSRVNVYSSPSL PSVRFFIDNRS SPNRSVIVSRKNRPVSNVK+TC
Sbjct: 61  DFPTHNHQTRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTC 120

Query: 121 MCSPTTHPGSFRCSLHKNVSSSGGHGQSVSFPSTRLNMRRSAMANSLVRIGGVEGEWMKR 180
           MCSPTTHPGSFRCSLHKNVSS GGH Q VSFPSTRLNM RSAMANS+VRIGGVEGE +KR
Sbjct: 121 MCSPTTHPGSFRCSLHKNVSSGGGHSQMVSFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180

Query: 181 ALTTLIRPSSHQQRRRAAFQPRSSRLSVMSKADDA 215
           ALTTLIRPSSHQQRRRAAFQPRSSRLSVMSKADDA
Sbjct: 181 ALTTLIRPSSHQQRRRAAFQPRSSRLSVMSKADDA 213

[Close]

BLAST of MS008533 vs. ExPASy TrEMBL
Match: A0A1S3BUD9 (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103493784 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 2.6e-94
Identity = 196/215 (91.16%), Postives = 201/215 (93.49%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVIRSLSPGGRFCNSPSLSSSTSAFASSTSSSFYSSSSAFRHDDHR 60
           MVTSSSSSKTRSSGPV+RSLSPGGRFCNSPSLSSS SAFAS  SSSFYSSSS FRHDDHR
Sbjct: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSPSAFAS--SSSFYSSSSTFRHDDHR 60

Query: 61  DFRSH-HQPRSTSPSRVNVYSSPSLAPSVRFFIDNRSISPNRSVIVSRKNRPVSNVKKTC 120
           DF +H HQ RSTSPSRVNVYSSPSL PSVRFFIDNRS SPNRSVIVSRKNRPVSNVK+TC
Sbjct: 61  DFPTHNHQTRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTC 120

Query: 121 MCSPTTHPGSFRCSLHKNVSSSGGHGQSVSFPSTRLNMRRSAMANSLVRIGGVEGEWMKR 180
           MCSPTTHPGSFRCSLHKNVSS GGH Q VSFPSTRLNM RSAMANS+VRIGGVEGE +KR
Sbjct: 121 MCSPTTHPGSFRCSLHKNVSSGGGHSQMVSFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180

Query: 181 ALTTLIRPSSHQQRRRAAFQPRSSRLSVMSKADDA 215
           ALTTLIRPSSHQQRRRAAFQPRSSRLSVMSKADDA
Sbjct: 181 ALTTLIRPSSHQQRRRAAFQPRSSRLSVMSKADDA 213

[Close]

BLAST of MS008533 vs. ExPASy TrEMBL
Match: A0A6J1FFN3 (uncharacterized protein LOC111443517 OS=Cucurbita moschata OX=3662 GN=LOC111443517 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.3e-93
Identity = 193/215 (89.77%), Postives = 201/215 (93.49%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVIRSLSPGGRFCNSPSLSSSTSAFASSTSSSFYSSSSAFRHDDHR 60
           MVTSSSSSKTRSSGPV+RS SPGGRFCNS SLSSS SAFASSTSS+FYSS+S FR DDHR
Sbjct: 1   MVTSSSSSKTRSSGPVLRSHSPGGRFCNSSSLSSSMSAFASSTSSNFYSSTSTFRDDDHR 60

Query: 61  DFRS-HHQPRSTSPSRVNVYSSPSLAPSVRFFIDNRSISPNRSVIVSRKNRPVSNVKKTC 120
            FRS HHQPRSTSPSRVNVYSSPSL PSVRFFIDNRS SPNRSVIVSRKNRPVSNVK+TC
Sbjct: 61  GFRSHHHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTC 120

Query: 121 MCSPTTHPGSFRCSLHKNVSSSGGHGQSVSFPSTRLNMRRSAMANSLVRIGGVEGEWMKR 180
           MCSPTTHPGSFRCSLHKNVSSSG H Q+ SFPSTRLNM RSAMANS+VRIGGVEGE +KR
Sbjct: 121 MCSPTTHPGSFRCSLHKNVSSSGSHSQAASFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180

Query: 181 ALTTLIRPSSHQQRRRAAFQPRSSRLSVMSKADDA 215
           ALTTLIRPSSHQQRRRA+FQPRSSRLSVMSKADDA
Sbjct: 181 ALTTLIRPSSHQQRRRASFQPRSSRLSVMSKADDA 215

[Close]

BLAST of MS008533 vs. ExPASy TrEMBL
Match: A0A6J1IF54 (uncharacterized protein LOC111476660 OS=Cucurbita maxima OX=3661 GN=LOC111476660 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 7.1e-92
Identity = 189/214 (88.32%), Postives = 200/214 (93.46%), Query Frame = 0


Query: 2   VTSSSSSKTRSSGPVIRSLSPGGRFCNSPSLSSSTSAFASSTSSSFYSSSSAFRHDDHRD 61
           + +SSSSKTRSSGPV+RS SPGGRFCNS SLSSS SAFASSTSS+FYSS+S FR DDHR 
Sbjct: 1   MVTSSSSKTRSSGPVLRSHSPGGRFCNSSSLSSSMSAFASSTSSNFYSSTSTFRDDDHRG 60

Query: 62  FRS-HHQPRSTSPSRVNVYSSPSLAPSVRFFIDNRSISPNRSVIVSRKNRPVSNVKKTCM 121
           FRS HHQPRSTSPSRVNVYSSPSL+PSVRFFIDNRS SPNRSVIVSRKNRPVSNVK+TCM
Sbjct: 61  FRSHHHQPRSTSPSRVNVYSSPSLSPSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCM 120

Query: 122 CSPTTHPGSFRCSLHKNVSSSGGHGQSVSFPSTRLNMRRSAMANSLVRIGGVEGEWMKRA 181
           CSPTTHPGSFRCSLHKNVSSSG H Q+ SFPSTRLNM RSAMANS+VRIGGVEGE +KRA
Sbjct: 121 CSPTTHPGSFRCSLHKNVSSSGSHSQAASFPSTRLNMWRSAMANSIVRIGGVEGELVKRA 180

Query: 182 LTTLIRPSSHQQRRRAAFQPRSSRLSVMSKADDA 215
           LTTLIRPSSHQQRRRA+FQPRSSRLSVMSKADDA
Sbjct: 181 LTTLIRPSSHQQRRRASFQPRSSRLSVMSKADDA 214

[Close]

BLAST of MS008533 vs. TAIR 10
Match: AT5G11090.1 (serine-rich protein-related )

HSP 1 Score: 223.8 bits (569), Expect = 1.3e-58
Identity = 133/217 (61.29%), Postives = 166/217 (76.50%), Query Frame = 0


Query: 5   SSSSKTRSSGPVIRSLSPGGRFCNSPSL---SSSTSAFASSTSSSFYSSSSAF--RHDDH 64
           ++SS+T+S+GPV+RS SP GRFC   S    SSS+SAFASSTSSSF S SSAF   H  H
Sbjct: 3   TTSSRTKSNGPVLRSQSPSGRFCGGYSRAVPSSSSSAFASSTSSSFSSPSSAFFSNHRHH 62

Query: 65  RDFRSHHQPRSTSPSRVNVYSSPSLAPSVRFFIDNRSISP-NRSVIVSRKNRPVSN--VK 124
               SHH  RS SP+RVN+Y++  ++ S R+ +D+RSISP N+S+ VS+   P  N  + 
Sbjct: 63  ESNHSHH--RSASPTRVNLYTAQPMSQSFRYSLDSRSISPTNKSISVSKNQPPSHNHKIS 122

Query: 125 KTCMCSPTTHPGSFRCSLHKNVSSSGGHGQSVSFPSTRLNMRRSAMANSLVRIGGVEGEW 184
           + CMCSPTTHPGSFRCSLHKNV++  G G + S+ +  LNMRRSAM NSLVRIGGVEGEW
Sbjct: 123 RRCMCSPTTHPGSFRCSLHKNVANPHGQG-TASYTTNGLNMRRSAMTNSLVRIGGVEGEW 182

Query: 185 MKRALTTLIRPSSHQQRRRAAFQPRSSRLSVMSKADD 214
           ++RALTTLIRPSSH  +RRAA+QPR SRLS+M+KAD+
Sbjct: 183 VRRALTTLIRPSSHHLKRRAAYQPRPSRLSIMAKADE 216

[Close]

BLAST of MS008533 vs. TAIR 10
Match: AT5G25280.1 (serine-rich protein-related )

HSP 1 Score: 214.2 bits (544), Expect = 1.1e-55
Identity = 130/220 (59.09%), Postives = 164/220 (74.55%), Query Frame = 0


Query: 5   SSSSKTRSSGPV-IRSLSPGGRFC-----NSPSLSSSTSAFASSTSSSFYSSSSAFRHDD 64
           +SS  TRS+G   +RS SP GRFC       PS S S+S FASSTSSSF S S+AF    
Sbjct: 4   TSSRTTRSNGSASLRSKSPSGRFCGVYSNRMPSSSPSSSGFASSTSSSFSSPSTAFFSSH 63

Query: 65  HRDFRSHHQPRSTSPSRVNVYSSPSLAPSVRFFIDNRSISPNRSVIVSRKNRP-----VS 124
           +++  +HHQ RS SP+RVN+++S  +  S R+ IDNRSISPNRS+ VS  N+P     + 
Sbjct: 64  NQN--NHHQHRSASPTRVNLFTSAPMTQSFRYSIDNRSISPNRSIAVS-SNKPSNHHKIP 123

Query: 125 NVKKTCMCSPTTHPGSFRCSLHKNVSSSGGHGQSVSFPSTRLNMRRSAMANSLVRIGGVE 184
           + ++ CMCSPTTHPGSFRCSLHKNV++  G G + S+ +  LNMRRSAM NSLVRIGGVE
Sbjct: 124 DSRRRCMCSPTTHPGSFRCSLHKNVANPHGQG-TASYTTNGLNMRRSAMTNSLVRIGGVE 183

Query: 185 GEWMKRALTTLIRPSSHQQRRRAAFQPRSSRLSVMSKADD 214
           GEW++RALTTLIRPSSHQ +RR+A++PR SRL+ MSKA+D
Sbjct: 184 GEWVRRALTTLIRPSSHQLKRRSAYEPRRSRLASMSKAED 219

[Close]

BLAST of MS008533 vs. TAIR 10
Match: AT5G25280.2 (serine-rich protein-related )

HSP 1 Score: 214.2 bits (544), Expect = 1.1e-55
Identity = 130/220 (59.09%), Postives = 164/220 (74.55%), Query Frame = 0


Query: 5   SSSSKTRSSGPV-IRSLSPGGRFC-----NSPSLSSSTSAFASSTSSSFYSSSSAFRHDD 64
           +SS  TRS+G   +RS SP GRFC       PS S S+S FASSTSSSF S S+AF    
Sbjct: 4   TSSRTTRSNGSASLRSKSPSGRFCGVYSNRMPSSSPSSSGFASSTSSSFSSPSTAFFSSH 63

Query: 65  HRDFRSHHQPRSTSPSRVNVYSSPSLAPSVRFFIDNRSISPNRSVIVSRKNRP-----VS 124
           +++  +HHQ RS SP+RVN+++S  +  S R+ IDNRSISPNRS+ VS  N+P     + 
Sbjct: 64  NQN--NHHQHRSASPTRVNLFTSAPMTQSFRYSIDNRSISPNRSIAVS-SNKPSNHHKIP 123

Query: 125 NVKKTCMCSPTTHPGSFRCSLHKNVSSSGGHGQSVSFPSTRLNMRRSAMANSLVRIGGVE 184
           + ++ CMCSPTTHPGSFRCSLHKNV++  G G + S+ +  LNMRRSAM NSLVRIGGVE
Sbjct: 124 DSRRRCMCSPTTHPGSFRCSLHKNVANPHGQG-TASYTTNGLNMRRSAMTNSLVRIGGVE 183

Query: 185 GEWMKRALTTLIRPSSHQQRRRAAFQPRSSRLSVMSKADD 214
           GEW++RALTTLIRPSSHQ +RR+A++PR SRL+ MSKA+D
Sbjct: 184 GEWVRRALTTLIRPSSHQLKRRSAYEPRRSRLASMSKAED 219

[Close]

BLAST of MS008533 vs. TAIR 10
Match: AT5G20370.1 (serine-rich protein-related )

HSP 1 Score: 79.3 bits (194), Expect = 4.1e-15
Identity = 62/168 (36.90%), Postives = 84/168 (50.00%), Query Frame = 0


Query: 50  SSSAFRHDDHRDFRSHHQPRSTSPSRVNVYSSPSLAPSVRFFIDNRSISPNRSVIVSRKN 109
           SSS   H++H     HH+ RS SP   N+        ++R    +    P  SV+    N
Sbjct: 16  SSSQRLHNNH---HHHHRQRSPSPCNKNL--------NLRLKFYSPGSIPKPSVVTVSSN 75

Query: 110 RPVSNVKKTCMCSPTTHPGSFRCSLH--------KNVSSS----GGHGQSVSFPSTRLNM 169
                 K+ C+CSPTTHPGSFRCS H        K ++SS       G +    +  LN+
Sbjct: 76  H---QTKRKCLCSPTTHPGSFRCSFHRRLEHEKSKTLASSTVKRNNRGDNTIRVNVGLNL 135

Query: 170 RRSAMANSLVRIGGVEGEWMKRAL-TTLIRPSSHQQRRRAAFQPRSSR 205
           R+ A+ NSL +IG VE E  +R+L   L +PSS    RR  F+PR SR
Sbjct: 136 RKLALMNSLAKIGSVEAERFRRSLAANLAKPSSLHSHRRPEFRPRLSR 169

[Close]

BLAST of MS008533 vs. TAIR 10
Match: AT1G67910.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.0 bits (110), Expect = 2.2e-05
Identity = 18/31 (58.06%), Postives = 24/31 (77.42%), Query Frame = 0


Query: 109 NRPVSNVKKTCMCSPTTHPGSFRCSLHKNVS 140
           +R  S  K  C+CSPTTHPGSFRC +H+++S
Sbjct: 34  SRQTSMTKTNCLCSPTTHPGSFRCRIHRSLS 64

The following BLAST results are available for this feature:

BLAST of MS008533 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142372.1	1.5e-107	100.00	uncharacterized protein DDB_G0271670 [Momordica charantia]	[more]
XP_038899899.1	2.8e-95	91.63	uncharacterized protein LOC120087091 [Benincasa hispida]	[more]
XP_008452898.1	5.4e-94	91.16	PREDICTED: putative protein TPRXL [Cucumis melo] >ADN34124.1 serine-rich protein...	[more]
XP_022937125.1	2.7e-93	89.77	uncharacterized protein LOC111443517 [Cucurbita moschata] >KAG7024442.1 hypothet...	[more]
XP_023536440.1	3.5e-93	89.77	uncharacterized serine-rich protein C215.13 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS008533 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS008533 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CMK2	7.1e-108	100.00	uncharacterized protein DDB_G0271670 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
E5GCC5	2.6e-94	91.16	Serine-rich protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3BUD9	2.6e-94	91.16	Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103493784 PE=4 SV=1	[more]
A0A6J1FFN3	1.3e-93	89.77	uncharacterized protein LOC111443517 OS=Cucurbita moschata OX=3662 GN=LOC1114435...	[more]
A0A6J1IF54	7.1e-92	88.32	uncharacterized protein LOC111476660 OS=Cucurbita maxima OX=3661 GN=LOC111476660...	[more]

BLAST of MS008533 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11090.1	1.3e-58	61.29	serine-rich protein-related	[more]
AT5G25280.1	1.1e-55	59.09	serine-rich protein-related	[more]
AT5G25280.2	1.1e-55	59.09	serine-rich protein-related	[more]
AT5G20370.1	4.1e-15	36.90	serine-rich protein-related	[more]
AT1G67910.1	2.2e-05	58.06	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..214
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..206
None	No IPR available	PANTHER	PTHR33132:SF80	BNACNNG20100D PROTEIN	coord: 5..212
None	No IPR available	PANTHER	PTHR33132	OSJNBB0118P14.9 PROTEIN	coord: 5..212

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS008533.1	MS008533.1	mRNA