MS008473 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTGGCTCAGGCTGCTCGTGCATTTGAGAATCAATTGGCAGAATCGATATTGGAGGGCGATGGCCAGCTGGCACTGAAGAAGCTTGCAACTGCTACACTTGAGAAACTAATGCCTAGAATAGAAGGAAAAGGTGAATTTGGTCAGGCTAGGTGGAGGCTTGTGTATGCTCCACAAATCCCAAGTTTACTCTCCGTTGATTCAACCAACGATCCTCTCAAATTACTCACCGGTAACATCTCATTTGGTACTGTAGTTGAAGTCCAGCTCGGAAAGCGCATTCAGGTTCTACTTATTATTTGGCTTGCACACTCGAACACTATTCTTTTCTATTAATAAAGCCCCATTTAGTAATGATTTGATTTTCAATTTTCTATTTATTTATATATATATATATATATATATATATATTTGANAACTTACCTCAAAGTTTTGTTTAGGAAGGTTTGGATAAATAGAATCGAGTTTTTAAATTATTGGAGGAGTAATACAGTAAATCAATGGCTGATATATAAGTAGAATTAACAAAATAGACCTGAATATTATTATTTTTCTTTTCCTGAACAAACCGACATGAATATTATTGCATCATTTGTCTCAAACTCACAGTCACATCTAAGTGGAAATTGAACAAAAGTAGGATGGTAAAATTGTTTAGCTCAGTAGATATATGGCTGAATGAGCAAATTCAGATTTTTGTACTCTTTAATAGAAGTTTCATATATATTTTTTTTAATTGTTAACTTCTTCATTGTTTTCCTTTTTTTTCTCCCCTCCCGTCTTCCAGGCCTCCATAGTTCGGCAGATGAAGGACTCGGAGATGGCCATGCAATGGACGTTCATGTACAAGCTTACGAGCCGCTTGCGGATGGTCTTTCAGTCAGCTCCAGCTCAGCGAATGCTCGTACTTGTCGAATATTCCGCTTCATCACTGGAT TTGGCTCAGGCTGCTCGTGCATTTGAGAATCAATTGGCAGAATCGATATTGGAGGGCGATGGCCAGCTGGCACTGAAGAAGCTTGCAACTGCTACACTTGAGAAACTAATGCCTAGAATAGAAGGAAAAGGTGAATTTGGTCAGGCTAGGTGGAGGCTTGTGTATGCTCCACAAATCCCAAGTTTACTCTCCGTTGATTCAACCAACGATCCTCTCAAATTACTCACCGGTAACATCTCATTTGGTACTGTAGTTGAAGTCCAGCTCGGAAAGCGCATTCAGGCCTCCATAGTTCGGCAGATGAAGGACTCGGAGATGGCCATGCAATGGACGTTCATGTACAAGCTTACGAGCCGCTTGCGGATGGTCTTTCAGTCAGCTCCAGCTCAGCGAATGCTCGTACTTGTCGAATATTCCGCTTCATCACTGGAT TTGGCTCAGGCTGCTCGTGCATTTGAGAATCAATTGGCAGAATCGATATTGGAGGGCGATGGCCAGCTGGCACTGAAGAAGCTTGCAACTGCTACACTTGAGAAACTAATGCCTAGAATAGAAGGAAAAGGTGAATTTGGTCAGGCTAGGTGGAGGCTTGTGTATGCTCCACAAATCCCAAGTTTACTCTCCGTTGATTCAACCAACGATCCTCTCAAATTACTCACCGGTAACATCTCATTTGGTACTGTAGTTGAAGTCCAGCTCGGAAAGCGCATTCAGGCCTCCATAGTTCGGCAGATGAAGGACTCGGAGATGGCCATGCAATGGACGTTCATGTACAAGCTTACGAGCCGCTTGCGGATGGTCTTTCAGTCAGCTCCAGCTCAGCGAATGCTCGTACTTGTCGAATATTCCGCTTCATCACTGGAT LAQAARAFENQLAESILEGDGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLSVDSTNDPLKLLTGNISFGTVVEVQLGKRIQASIVRQMKDSEMAMQWTFMYKLTSRLRMVFQSAPAQRMLVLVEYSASSLD Homology
BLAST of MS008473 vs. NCBI nr
Match: XP_022133551.1 (uncharacterized protein LOC111006106 [Momordica charantia] >XP_022133559.1 uncharacterized protein LOC111006106 [Momordica charantia]) HSP 1 Score: 270.8 bits (691), Expect = 6.9e-69 Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of MS008473 vs. NCBI nr
Match: XP_038897772.1 (protein TIC236, chloroplastic [Benincasa hispida] >XP_038897773.1 protein TIC236, chloroplastic [Benincasa hispida]) HSP 1 Score: 238.4 bits (607), Expect = 3.8e-59 Identity = 130/145 (89.66%), Postives = 134/145 (92.41%), Query Frame = 0
BLAST of MS008473 vs. NCBI nr
Match: XP_022936094.1 (uncharacterized protein LOC111442799 [Cucurbita moschata]) HSP 1 Score: 237.3 bits (604), Expect = 8.4e-59 Identity = 130/145 (89.66%), Postives = 133/145 (91.72%), Query Frame = 0
BLAST of MS008473 vs. NCBI nr
Match: XP_022976080.1 (uncharacterized protein LOC111476591 [Cucurbita maxima]) HSP 1 Score: 237.3 bits (604), Expect = 8.4e-59 Identity = 130/145 (89.66%), Postives = 133/145 (91.72%), Query Frame = 0
BLAST of MS008473 vs. NCBI nr
Match: KAG6591591.1 (Translocon at the inner envelope membrane of chloroplasts 236, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 237.3 bits (604), Expect = 8.4e-59 Identity = 130/145 (89.66%), Postives = 133/145 (91.72%), Query Frame = 0
BLAST of MS008473 vs. ExPASy Swiss-Prot
Match: F4ISL7 (Protein TIC236, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC236 PE=1 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 2.6e-55 Identity = 112/143 (78.32%), Postives = 127/143 (88.81%), Query Frame = 0
BLAST of MS008473 vs. ExPASy Swiss-Prot
Match: W0RYD3 (Protein SUBSTANDARD STARCH GRAIN 4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SSG4 PE=1 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 1.3e-54 Identity = 110/141 (78.01%), Postives = 125/141 (88.65%), Query Frame = 0
BLAST of MS008473 vs. ExPASy TrEMBL
Match: A0A6J1BWB5 (uncharacterized protein LOC111006106 OS=Momordica charantia OX=3673 GN=LOC111006106 PE=4 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 3.3e-69 Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of MS008473 vs. ExPASy TrEMBL
Match: A0A6J1III6 (uncharacterized protein LOC111476591 OS=Cucurbita maxima OX=3661 GN=LOC111476591 PE=4 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 4.1e-59 Identity = 130/145 (89.66%), Postives = 133/145 (91.72%), Query Frame = 0
BLAST of MS008473 vs. ExPASy TrEMBL
Match: A0A6J1F7B9 (uncharacterized protein LOC111442799 OS=Cucurbita moschata OX=3662 GN=LOC111442799 PE=4 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 4.1e-59 Identity = 130/145 (89.66%), Postives = 133/145 (91.72%), Query Frame = 0
BLAST of MS008473 vs. ExPASy TrEMBL
Match: A0A0A0LEE3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G879460 PE=4 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 5.5e-56 Identity = 119/142 (83.80%), Postives = 130/142 (91.55%), Query Frame = 0
BLAST of MS008473 vs. ExPASy TrEMBL
Match: A0A6A3CAX7 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00006991pilonHSYRG00021 PE=4 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 8.0e-55 Identity = 117/142 (82.39%), Postives = 127/142 (89.44%), Query Frame = 0
BLAST of MS008473 vs. TAIR 10
Match: AT2G25660.1 (embryo defective 2410 ) HSP 1 Score: 216.1 bits (549), Expect = 1.9e-56 Identity = 112/143 (78.32%), Postives = 127/143 (88.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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