Homology
BLAST of MS008408 vs. NCBI nr
Match:
XP_022141338.1 (pentatricopeptide repeat-containing protein At5g25630 isoform X2 [Momordica charantia] >XP_022141342.1 pentatricopeptide repeat-containing protein At5g25630 isoform X2 [Momordica charantia] >XP_022141350.1 pentatricopeptide repeat-containing protein At5g25630 isoform X2 [Momordica charantia])
HSP 1 Score: 781.2 bits (2016), Expect = 4.2e-222
Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0
Query: 1 MNILIERGKPQEAQNVFDNLIADGHRPSLVTYTTLLSALTVQKRFKFIQSVILMVEENGM 60
MNILIERGKPQEAQNVFDNLIADGHRPSLVTYTTLLSALTVQKRFKFIQSVILMVEENGM
Sbjct: 9 MNILIERGKPQEAQNVFDNLIADGHRPSLVTYTTLLSALTVQKRFKFIQSVILMVEENGM 68
Query: 61 EPDSIFFNAVINAFSEAGNVEEAMIAFQKMKASGLRPSTSTFNTLIKGYGIAGKPEETIE 120
EPDSIFFNAVINAFSEAGNVEEAMIAFQKMKASGLRPSTSTFNTLIKGYGIAGKPEETIE
Sbjct: 69 EPDSIFFNAVINAFSEAGNVEEAMIAFQKMKASGLRPSTSTFNTLIKGYGIAGKPEETIE 128
Query: 121 LLDLMYREETLKPNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVTYNTIATAH 180
LLDLMYREETLKPNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVTYNTIATAH
Sbjct: 129 LLDLMYREETLKPNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVTYNTIATAH 188
Query: 181 AQSGETDQAEKMILQMQDNGIRPNQRTCSIIACGYCKEGRLKEAMRFIYRMKDLGVRPNL 240
AQSGETDQAEKMILQMQDNGIRPNQRTCSIIACGYCKEGRLKEAMRFIYRMKDLGVRPNL
Sbjct: 189 AQSGETDQAEKMILQMQDNGIRPNQRTCSIIACGYCKEGRLKEAMRFIYRMKDLGVRPNL 248
Query: 241 VLFNSLIKGFVESMDRDGVDKVLTLMEEFGVKPDVITFSTIMNAWSTAGFMVKCREVFDE 300
VLFNSLIKGFVESMDRDGVDKVLTLMEEFGVKPDVITFSTIMNAWSTAGFMVKCREVFDE
Sbjct: 249 VLFNSLIKGFVESMDRDGVDKVLTLMEEFGVKPDVITFSTIMNAWSTAGFMVKCREVFDE 308
Query: 301 MVKAGIEPDTHAYSILAKGYVRSQEPEKAEELLNTMTRYGKRPNVVIFTTIISGWCSSGR 360
MVKAGIEPDTHAYSILAKGYVRSQEPEKAEELLNTMTRYGKRPNVVIFTTIISGWCSSGR
Sbjct: 309 MVKAGIEPDTHAYSILAKGYVRSQEPEKAEELLNTMTRYGKRPNVVIFTTIISGWCSSGR 368
Query: 361 MDNAIKILNKMCEYRVSPNLKTFETIIWG 390
MDNAIKILNKMCEYRVSPNLKTFETIIWG
Sbjct: 369 MDNAIKILNKMCEYRVSPNLKTFETIIWG 397
BLAST of MS008408 vs. NCBI nr
Match:
XP_022141330.1 (pentatricopeptide repeat-containing protein At5g25630 isoform X1 [Momordica charantia])
HSP 1 Score: 781.2 bits (2016), Expect = 4.2e-222
Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0
Query: 1 MNILIERGKPQEAQNVFDNLIADGHRPSLVTYTTLLSALTVQKRFKFIQSVILMVEENGM 60
MNILIERGKPQEAQNVFDNLIADGHRPSLVTYTTLLSALTVQKRFKFIQSVILMVEENGM
Sbjct: 80 MNILIERGKPQEAQNVFDNLIADGHRPSLVTYTTLLSALTVQKRFKFIQSVILMVEENGM 139
Query: 61 EPDSIFFNAVINAFSEAGNVEEAMIAFQKMKASGLRPSTSTFNTLIKGYGIAGKPEETIE 120
EPDSIFFNAVINAFSEAGNVEEAMIAFQKMKASGLRPSTSTFNTLIKGYGIAGKPEETIE
Sbjct: 140 EPDSIFFNAVINAFSEAGNVEEAMIAFQKMKASGLRPSTSTFNTLIKGYGIAGKPEETIE 199
Query: 121 LLDLMYREETLKPNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVTYNTIATAH 180
LLDLMYREETLKPNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVTYNTIATAH
Sbjct: 200 LLDLMYREETLKPNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVTYNTIATAH 259
Query: 181 AQSGETDQAEKMILQMQDNGIRPNQRTCSIIACGYCKEGRLKEAMRFIYRMKDLGVRPNL 240
AQSGETDQAEKMILQMQDNGIRPNQRTCSIIACGYCKEGRLKEAMRFIYRMKDLGVRPNL
Sbjct: 260 AQSGETDQAEKMILQMQDNGIRPNQRTCSIIACGYCKEGRLKEAMRFIYRMKDLGVRPNL 319
Query: 241 VLFNSLIKGFVESMDRDGVDKVLTLMEEFGVKPDVITFSTIMNAWSTAGFMVKCREVFDE 300
VLFNSLIKGFVESMDRDGVDKVLTLMEEFGVKPDVITFSTIMNAWSTAGFMVKCREVFDE
Sbjct: 320 VLFNSLIKGFVESMDRDGVDKVLTLMEEFGVKPDVITFSTIMNAWSTAGFMVKCREVFDE 379
Query: 301 MVKAGIEPDTHAYSILAKGYVRSQEPEKAEELLNTMTRYGKRPNVVIFTTIISGWCSSGR 360
MVKAGIEPDTHAYSILAKGYVRSQEPEKAEELLNTMTRYGKRPNVVIFTTIISGWCSSGR
Sbjct: 380 MVKAGIEPDTHAYSILAKGYVRSQEPEKAEELLNTMTRYGKRPNVVIFTTIISGWCSSGR 439
Query: 361 MDNAIKILNKMCEYRVSPNLKTFETIIWG 390
MDNAIKILNKMCEYRVSPNLKTFETIIWG
Sbjct: 440 MDNAIKILNKMCEYRVSPNLKTFETIIWG 468
BLAST of MS008408 vs. NCBI nr
Match:
XP_038898467.1 (pentatricopeptide repeat-containing protein At5g25630 isoform X2 [Benincasa hispida])
HSP 1 Score: 721.5 bits (1861), Expect = 4.0e-204
Identity = 353/389 (90.75%), Postives = 371/389 (95.37%), Query Frame = 0
Query: 1 MNILIERGKPQEAQNVFDNLIADGHRPSLVTYTTLLSALTVQKRFKFIQSVILMVEENGM 60
MNILIE+GKPQEAQNVFDNLIA+GHRPSLVTYTTLLSALTVQKRFK I SVI MVEE GM
Sbjct: 1 MNILIEKGKPQEAQNVFDNLIAEGHRPSLVTYTTLLSALTVQKRFKCINSVIQMVEEKGM 60
Query: 61 EPDSIFFNAVINAFSEAGNVEEAMIAFQKMKASGLRPSTSTFNTLIKGYGIAGKPEETIE 120
PDSIFFNAVINAFSEAGNVEEAM+ F+KMKASGLRP TSTFNTLIKGYGIAGKPEET+E
Sbjct: 61 IPDSIFFNAVINAFSEAGNVEEAMLTFRKMKASGLRPGTSTFNTLIKGYGIAGKPEETVE 120
Query: 121 LLDLMYREETLKPNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVTYNTIATAH 180
LLDLMYREE LKPNLRTCNVLVRAWCKKKKI EAWNVV+NM+ALGIKPDAVTYNTIATAH
Sbjct: 121 LLDLMYREENLKPNLRTCNVLVRAWCKKKKIAEAWNVVQNMVALGIKPDAVTYNTIATAH 180
Query: 181 AQSGETDQAEKMILQMQDNGIRPNQRTCSIIACGYCKEGRLKEAMRFIYRMKDLGVRPNL 240
AQSGETD+AE++I MQDN I+PNQRTCSI+ACGYCKEGRLKEAMRF+Y+MKDLGV+PNL
Sbjct: 181 AQSGETDRAEEIIKLMQDNNIQPNQRTCSIVACGYCKEGRLKEAMRFVYKMKDLGVQPNL 240
Query: 241 VLFNSLIKGFVESMDRDGVDKVLTLMEEFGVKPDVITFSTIMNAWSTAGFMVKCREVFDE 300
VLFNSLIKGFVESMDRDGVDK L LM+EFGVKPDVITFST+MNAWSTAGFMVKCREVFDE
Sbjct: 241 VLFNSLIKGFVESMDRDGVDKALMLMKEFGVKPDVITFSTVMNAWSTAGFMVKCREVFDE 300
Query: 301 MVKAGIEPDTHAYSILAKGYVRSQEPEKAEELLNTMTRYGKRPNVVIFTTIISGWCSSGR 360
MVKAGIEPD HAYSILAKGYVRSQEPEKAEELLNTMTRYGKRPNVV FTTIISGWCSSGR
Sbjct: 301 MVKAGIEPDAHAYSILAKGYVRSQEPEKAEELLNTMTRYGKRPNVVFFTTIISGWCSSGR 360
Query: 361 MDNAIKILNKMCEYRVSPNLKTFETIIWG 390
MDNAIKILN MCEY VSPNLKTFET+IWG
Sbjct: 361 MDNAIKILNNMCEYGVSPNLKTFETMIWG 389
BLAST of MS008408 vs. NCBI nr
Match:
XP_038898466.1 (pentatricopeptide repeat-containing protein At5g25630 isoform X1 [Benincasa hispida])
HSP 1 Score: 721.5 bits (1861), Expect = 4.0e-204
Identity = 353/389 (90.75%), Postives = 371/389 (95.37%), Query Frame = 0
Query: 1 MNILIERGKPQEAQNVFDNLIADGHRPSLVTYTTLLSALTVQKRFKFIQSVILMVEENGM 60
MNILIE+GKPQEAQNVFDNLIA+GHRPSLVTYTTLLSALTVQKRFK I SVI MVEE GM
Sbjct: 79 MNILIEKGKPQEAQNVFDNLIAEGHRPSLVTYTTLLSALTVQKRFKCINSVIQMVEEKGM 138
Query: 61 EPDSIFFNAVINAFSEAGNVEEAMIAFQKMKASGLRPSTSTFNTLIKGYGIAGKPEETIE 120
PDSIFFNAVINAFSEAGNVEEAM+ F+KMKASGLRP TSTFNTLIKGYGIAGKPEET+E
Sbjct: 139 IPDSIFFNAVINAFSEAGNVEEAMLTFRKMKASGLRPGTSTFNTLIKGYGIAGKPEETVE 198
Query: 121 LLDLMYREETLKPNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVTYNTIATAH 180
LLDLMYREE LKPNLRTCNVLVRAWCKKKKI EAWNVV+NM+ALGIKPDAVTYNTIATAH
Sbjct: 199 LLDLMYREENLKPNLRTCNVLVRAWCKKKKIAEAWNVVQNMVALGIKPDAVTYNTIATAH 258
Query: 181 AQSGETDQAEKMILQMQDNGIRPNQRTCSIIACGYCKEGRLKEAMRFIYRMKDLGVRPNL 240
AQSGETD+AE++I MQDN I+PNQRTCSI+ACGYCKEGRLKEAMRF+Y+MKDLGV+PNL
Sbjct: 259 AQSGETDRAEEIIKLMQDNNIQPNQRTCSIVACGYCKEGRLKEAMRFVYKMKDLGVQPNL 318
Query: 241 VLFNSLIKGFVESMDRDGVDKVLTLMEEFGVKPDVITFSTIMNAWSTAGFMVKCREVFDE 300
VLFNSLIKGFVESMDRDGVDK L LM+EFGVKPDVITFST+MNAWSTAGFMVKCREVFDE
Sbjct: 319 VLFNSLIKGFVESMDRDGVDKALMLMKEFGVKPDVITFSTVMNAWSTAGFMVKCREVFDE 378
Query: 301 MVKAGIEPDTHAYSILAKGYVRSQEPEKAEELLNTMTRYGKRPNVVIFTTIISGWCSSGR 360
MVKAGIEPD HAYSILAKGYVRSQEPEKAEELLNTMTRYGKRPNVV FTTIISGWCSSGR
Sbjct: 379 MVKAGIEPDAHAYSILAKGYVRSQEPEKAEELLNTMTRYGKRPNVVFFTTIISGWCSSGR 438
Query: 361 MDNAIKILNKMCEYRVSPNLKTFETIIWG 390
MDNAIKILN MCEY VSPNLKTFET+IWG
Sbjct: 439 MDNAIKILNNMCEYGVSPNLKTFETMIWG 467
BLAST of MS008408 vs. NCBI nr
Match:
XP_016903528.1 (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g25630 [Cucumis melo])
HSP 1 Score: 649.4 bits (1674), Expect = 1.9e-182
Identity = 321/389 (82.52%), Postives = 356/389 (91.52%), Query Frame = 0
Query: 1 MNILIERGKPQEAQNVFDNLIADGHRPSLVTYTTLLSALTVQKRFKFIQSVILMVEENGM 60
MNILIERGKPQ AQN+FDNLIA+GHRPSLVTYT+LL+ALTVQKRFK I SVI MVEE GM
Sbjct: 79 MNILIERGKPQGAQNIFDNLIAEGHRPSLVTYTSLLTALTVQKRFKCIYSVIQMVEEKGM 138
Query: 61 EPDSIFFNAVINAFSEAGNVEEAMIAFQKMKASGLRPSTSTFNTLIKGYGIAGKPEETIE 120
PDSIFFNAVINAFSEAG VEEAM+ F+KMKASGLRP TSTFNTLIKGYGIAGKPEET++
Sbjct: 139 IPDSIFFNAVINAFSEAGKVEEAMLTFRKMKASGLRPITSTFNTLIKGYGIAGKPEETVQ 198
Query: 121 LLDLMYREETLKPNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVTYNTIATAH 180
LLDLMYREE LKPNLRTCNVLVRAWCKKKKI EAWNVV+++ +LGIKPDAVTYNT+ATA+
Sbjct: 199 LLDLMYREENLKPNLRTCNVLVRAWCKKKKISEAWNVVQSIGSLGIKPDAVTYNTLATAY 258
Query: 181 AQSGETDQAEKMILQMQDNGIRPNQRTCSIIACGYCKEGRLKEAMRFIYRMKDLGVRPNL 240
AQ+GET++AE++I MQDN ++PNQ+TCSI+A GYCKE RLKEAMRF+Y+MK+LGV+PNL
Sbjct: 259 AQNGETERAEEIIQVMQDNNVQPNQQTCSIVAFGYCKEXRLKEAMRFVYKMKNLGVQPNL 318
Query: 241 VLFNSLIKGFVESMDRDGVDKVLTLMEEFGVKPDVITFSTIMNAWSTAGFMVKCREVFDE 300
V FNSLIKGF+E MDRDGV+KVL LM+EFGV+PDVIT+ST+MNAWS AGFM KCREVFDE
Sbjct: 319 VPFNSLIKGFMELMDRDGVNKVLMLMKEFGVEPDVITYSTVMNAWSKAGFMAKCREVFDE 378
Query: 301 MVKAGIEPDTHAYSILAKGYVRSQEPEKAEELLNTMTRYGKRPNVVIFTTIISGWCSSGR 360
MV AGIEPD HAYSILAKGYVRSQEP+KAE+ T Y KRPNVVIFTTIISGWCSSGR
Sbjct: 379 MVNAGIEPDAHAYSILAKGYVRSQEPKKAED----XTSYRKRPNVVIFTTIISGWCSSGR 438
Query: 361 MDNAIKILNKMCEYRVSPNLKTFETIIWG 390
MDNAIKILNKMCEY VSPNLKTFETII G
Sbjct: 439 MDNAIKILNKMCEYGVSPNLKTFETIICG 463
BLAST of MS008408 vs. ExPASy Swiss-Prot
Match:
Q8GZ63 (Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana OX=3702 GN=At5g25630 PE=2 SV=2)
HSP 1 Score: 510.4 bits (1313), Expect = 1.8e-143
Identity = 246/393 (62.60%), Postives = 315/393 (80.15%), Query Frame = 0
Query: 1 MNILIERGKPQEAQNVFDNLIADGHRPSLVTYTTLLSALTVQKRFKFIQSVILMVEENGM 60
MN+LIERG+P EAQ VF L GHRPSL++YTTLL+A+TVQK++ I S++ VE++G
Sbjct: 52 MNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGT 111
Query: 61 EPDSIFFNAVINAFSEAGNVEEAMIAFQKMKASGLRPSTSTFNTLIKGYGIAGKPEETIE 120
+ DSIFFNAVINAFSE+GN+E+A+ A KMK GL P+TST+NTLIKGYGIAGKPE + E
Sbjct: 112 KLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSE 171
Query: 121 LLDLMYREETLK--PNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVTYNTIAT 180
LLDLM E + PN+RT NVLV+AWCKKKK+ EAW VV+ M G++PD VTYNTIAT
Sbjct: 172 LLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIAT 231
Query: 181 AHAQSGETDQAEKMILQ--MQDNGIRPNQRTCSIIACGYCKEGRLKEAMRFIYRMKDLGV 240
+ Q GET +AE +++ + +PN RTC I+ GYC+EGR+++ +RF+ RMK++ V
Sbjct: 232 CYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRV 291
Query: 241 RPNLVLFNSLIKGFVESMDRDGVDKVLTLMEEFGVKPDVITFSTIMNAWSTAGFMVKCRE 300
NLV+FNSLI GFVE MDRDG+D+VLTLM+E VK DVIT+ST+MNAWS+AG+M K +
Sbjct: 292 EANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQ 351
Query: 301 VFDEMVKAGIEPDTHAYSILAKGYVRSQEPEKAEELLNTMTRYGKRPNVVIFTTIISGWC 360
VF EMVKAG++PD HAYSILAKGYVR++EP+KAEELL T+ RPNVVIFTT+ISGWC
Sbjct: 352 VFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI-VESRPNVVIFTTVISGWC 411
Query: 361 SSGRMDNAIKILNKMCEYRVSPNLKTFETIIWG 390
S+G MD+A+++ NKMC++ VSPN+KTFET++WG
Sbjct: 412 SNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWG 443
BLAST of MS008408 vs. ExPASy Swiss-Prot
Match:
Q8S9D1 (Pentatricopeptide repeat-containing protein At5g21222 OS=Arabidopsis thaliana OX=3702 GN=ATC401 PE=2 SV=1)
HSP 1 Score: 498.4 bits (1282), Expect = 7.2e-140
Identity = 235/391 (60.10%), Postives = 311/391 (79.54%), Query Frame = 0
Query: 1 MNILIERGKPQEAQNVFDNLIADGHRPSLVTYTTLLSALTVQKRFKFIQSVILMVEENGM 60
MN LIERG+PQEA ++F+ LI +GH+PSL+TYTTL++ALT QK F + S+I VE+NG+
Sbjct: 326 MNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGL 385
Query: 61 EPDSIFFNAVINAFSEAGNVEEAMIAFQKMKASGLRPSTSTFNTLIKGYGIAGKPEETIE 120
+PD+I FNA+INA SE+GN+++AM F+KMK SG +P+ STFNTLIKGYG GK EE+
Sbjct: 386 KPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSR 445
Query: 121 LLDLMYREETLKPNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVTYNTIATAH 180
LLD+M R+E L+PN RTCN+LV+AWC ++KI EAWN+V M + G+KPD VT+NT+A A+
Sbjct: 446 LLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAY 505
Query: 181 AQSGETDQAEKMIL-QMQDNGIRPNQRTCSIIACGYCKEGRLKEAMRFIYRMKDLGVRPN 240
A+ G T AE MI+ +M N ++PN RTC I GYC+EG+++EA+RF YRMK+LGV PN
Sbjct: 506 ARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPN 565
Query: 241 LVLFNSLIKGFVESMDRDGVDKVLTLMEEFGVKPDVITFSTIMNAWSTAGFMVKCREVFD 300
L +FNSLIKGF+ D DGV +V+ LMEEFGVKPDV+TFST+MNAWS+ G M +C E++
Sbjct: 566 LFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYT 625
Query: 301 EMVKAGIEPDTHAYSILAKGYVRSQEPEKAEELLNTMTRYGKRPNVVIFTTIISGWCSSG 360
+M++ GI+PD HA+SILAKGY R+ EPEKAE++LN M ++G RPNVVI+T IISGWCS+G
Sbjct: 626 DMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAG 685
Query: 361 RMDNAIKILNKMCE-YRVSPNLKTFETIIWG 390
M A+++ KMC +SPNL T+ET+IWG
Sbjct: 686 EMKKAMQVYKKMCGIVGLSPNLTTYETLIWG 716
BLAST of MS008408 vs. ExPASy Swiss-Prot
Match:
Q9LQ14 (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g62930 PE=2 SV=2)
HSP 1 Score: 204.9 bits (520), Expect = 1.6e-51
Identity = 117/384 (30.47%), Postives = 201/384 (52.34%), Query Frame = 0
Query: 4 LIERGKPQEAQNVFDNLIADGHRPSLVTYTTLLSALTVQKRFKFIQSVILMVEENGMEPD 63
L K EA + D ++A G +P L TY T+++ L + S++ +E+ +E D
Sbjct: 195 LFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEAD 254
Query: 64 SIFFNAVINAFSEAGNVEEAMIAFQKMKASGLRPSTSTFNTLIKGYGIAGKPEETIELLD 123
+ + +I+A NV +A+ F +M G+RP+ T+N+LI+ G+ + LL
Sbjct: 255 VVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 314
Query: 124 LMYREETLKPNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVTYNTIATAHAQS 183
M E + PN+ T + L+ A+ K+ K+ EA + + MI I PD TY+++
Sbjct: 315 DMI-ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 374
Query: 184 GETDQAEKMILQMQDNGIRPNQRTCSIIACGYCKEGRLKEAMRFIYRMKDLGVRPNLVLF 243
D+A+ M M PN T + + G+CK R++E M M G+ N V +
Sbjct: 375 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 434
Query: 244 NSLIKGFVESMDRDGVDKVLTLMEEFGVKPDVITFSTIMNAWSTAGFMVKCREVFDEMVK 303
N+LI+G ++ D D K+ M GV PD+IT+S +++ G + K VF+ + K
Sbjct: 435 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 494
Query: 304 AGIEPDTHAYSILAKGYVRSQEPEKAEELLNTMTRYGKRPNVVIFTTIISGWCSSGRMDN 363
+ +EPD + Y+I+ +G ++ + E +L +++ G +PNV+I+TT+ISG+C G +
Sbjct: 495 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 554
Query: 364 AIKILNKMCEYRVSPNLKTFETII 388
A + +M E PN T+ T+I
Sbjct: 555 ADALFREMKEDGTLPNSGTYNTLI 577
BLAST of MS008408 vs. ExPASy Swiss-Prot
Match:
Q0WKV3 (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12300 PE=2 SV=1)
HSP 1 Score: 199.9 bits (507), Expect = 5.3e-50
Identity = 114/381 (29.92%), Postives = 202/381 (53.02%), Query Frame = 0
Query: 9 KPQEAQNVFDNLIADGHRPSLVTYTTLLSALTVQKRFKFIQSVILMVEENGMEPDSIFFN 68
K +A ++F ++I P+++ ++ L SA+ K++ + ++ +E G+ + +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 69 AVINAFSEAGNVEEAMIAFQKMKASGLRPSTSTFNTLIKGYGIAGKPEETIELLDLMYRE 128
+IN F + A A K+ G P+T TF+TLI G + G+ E +EL+D M E
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV-E 187
Query: 129 ETLKPNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVTYNTIATAHAQSGETDQ 188
KP+L T N LV C K EA +++ M+ G +P+AVTY + +SG+T
Sbjct: 188 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 247
Query: 189 AEKMILQMQDNGIRPNQRTCSIIACGYCKEGRLKEAMRFIYRMKDLGVRPNLVLFNSLIK 248
A +++ +M++ I+ + SII G CK G L A M+ G+ N++ +N LI
Sbjct: 248 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 307
Query: 249 GFVESMDRDGVDKVLTLMEEFGVKPDVITFSTIMNAWSTAGFMVKCREVFDEMVKAGIEP 308
GF + D K+L M + + P+V+TFS +++++ G + + E+ EM+ GI P
Sbjct: 308 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 367
Query: 309 DTHAYSILAKGYVRSQEPEKAEELLNTMTRYGKRPNVVIFTTIISGWCSSGRMDNAIKIL 368
DT Y+ L G+ + +KA ++++ M G PN+ F +I+G+C + R+D+ +++
Sbjct: 368 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 427
Query: 369 NKMCEYRVSPNLKTFETIIWG 390
KM V + T+ T+I G
Sbjct: 428 RKMSLRGVVADTVTYNTLIQG 447
BLAST of MS008408 vs. ExPASy Swiss-Prot
Match:
Q76C99 (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV=1)
HSP 1 Score: 199.1 bits (505), Expect = 9.0e-50
Identity = 104/389 (26.74%), Postives = 216/389 (55.53%), Query Frame = 0
Query: 1 MNILIERGKPQEAQNVFDNLIADGHRPSLVTYTTLLSALTVQKRFKFIQSVILMVEENGM 60
+N + G +A + + ++ G P +VTY ++++AL + V+ + +NG+
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262
Query: 61 EPDSIFFNAVINAFSEAGNVEEAMIAFQKMKASGLRPSTSTFNTLIKGYGIAGKPEETIE 120
PD + +N++++ + +G +EA+ +KM++ G+ P T++ L+ G+ E +
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322
Query: 121 LLDLMYREETLKPNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVTYNTIATAH 180
+ D M + LKP + T L++ + K + E +++ M+ GI PD ++ + A+
Sbjct: 323 IFDSM-TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 382
Query: 181 AQSGETDQAEKMILQMQDNGIRPNQRTCSIIACGYCKEGRLKEAMRFIYRMKDLGVRPNL 240
A+ G+ DQA + +M+ G+ PN T + CK GR+++AM + +M D G+ P
Sbjct: 383 AKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 442
Query: 241 VLFNSLIKGFVESMDRDGVDKVLTLMEEFGVKPDVITFSTIMNAWSTAGFMVKCREVFDE 300
+++NSLI G + ++++ M + G+ + I F++I+++ G +++ ++F+
Sbjct: 443 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFEL 502
Query: 301 MVKAGIEPDTHAYSILAKGYVRSQEPEKAEELLNTMTRYGKRPNVVIFTTIISGWCSSGR 360
MV+ G++P+ Y+ L GY + + ++A +LL+ M G +PN V ++T+I+G+C R
Sbjct: 503 MVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISR 562
Query: 361 MDNAIKILNKMCEYRVSPNLKTFETIIWG 390
M++A+ + +M VSP++ T+ I+ G
Sbjct: 563 MEDALVLFKEMESSGVSPDIITYNIILQG 590
BLAST of MS008408 vs. ExPASy TrEMBL
Match:
A0A6J1CJL5 (pentatricopeptide repeat-containing protein At5g25630 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011746 PE=4 SV=1)
HSP 1 Score: 781.2 bits (2016), Expect = 2.0e-222
Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0
Query: 1 MNILIERGKPQEAQNVFDNLIADGHRPSLVTYTTLLSALTVQKRFKFIQSVILMVEENGM 60
MNILIERGKPQEAQNVFDNLIADGHRPSLVTYTTLLSALTVQKRFKFIQSVILMVEENGM
Sbjct: 9 MNILIERGKPQEAQNVFDNLIADGHRPSLVTYTTLLSALTVQKRFKFIQSVILMVEENGM 68
Query: 61 EPDSIFFNAVINAFSEAGNVEEAMIAFQKMKASGLRPSTSTFNTLIKGYGIAGKPEETIE 120
EPDSIFFNAVINAFSEAGNVEEAMIAFQKMKASGLRPSTSTFNTLIKGYGIAGKPEETIE
Sbjct: 69 EPDSIFFNAVINAFSEAGNVEEAMIAFQKMKASGLRPSTSTFNTLIKGYGIAGKPEETIE 128
Query: 121 LLDLMYREETLKPNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVTYNTIATAH 180
LLDLMYREETLKPNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVTYNTIATAH
Sbjct: 129 LLDLMYREETLKPNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVTYNTIATAH 188
Query: 181 AQSGETDQAEKMILQMQDNGIRPNQRTCSIIACGYCKEGRLKEAMRFIYRMKDLGVRPNL 240
AQSGETDQAEKMILQMQDNGIRPNQRTCSIIACGYCKEGRLKEAMRFIYRMKDLGVRPNL
Sbjct: 189 AQSGETDQAEKMILQMQDNGIRPNQRTCSIIACGYCKEGRLKEAMRFIYRMKDLGVRPNL 248
Query: 241 VLFNSLIKGFVESMDRDGVDKVLTLMEEFGVKPDVITFSTIMNAWSTAGFMVKCREVFDE 300
VLFNSLIKGFVESMDRDGVDKVLTLMEEFGVKPDVITFSTIMNAWSTAGFMVKCREVFDE
Sbjct: 249 VLFNSLIKGFVESMDRDGVDKVLTLMEEFGVKPDVITFSTIMNAWSTAGFMVKCREVFDE 308
Query: 301 MVKAGIEPDTHAYSILAKGYVRSQEPEKAEELLNTMTRYGKRPNVVIFTTIISGWCSSGR 360
MVKAGIEPDTHAYSILAKGYVRSQEPEKAEELLNTMTRYGKRPNVVIFTTIISGWCSSGR
Sbjct: 309 MVKAGIEPDTHAYSILAKGYVRSQEPEKAEELLNTMTRYGKRPNVVIFTTIISGWCSSGR 368
Query: 361 MDNAIKILNKMCEYRVSPNLKTFETIIWG 390
MDNAIKILNKMCEYRVSPNLKTFETIIWG
Sbjct: 369 MDNAIKILNKMCEYRVSPNLKTFETIIWG 397
BLAST of MS008408 vs. ExPASy TrEMBL
Match:
A0A6J1CHS1 (pentatricopeptide repeat-containing protein At5g25630 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011746 PE=4 SV=1)
HSP 1 Score: 781.2 bits (2016), Expect = 2.0e-222
Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0
Query: 1 MNILIERGKPQEAQNVFDNLIADGHRPSLVTYTTLLSALTVQKRFKFIQSVILMVEENGM 60
MNILIERGKPQEAQNVFDNLIADGHRPSLVTYTTLLSALTVQKRFKFIQSVILMVEENGM
Sbjct: 80 MNILIERGKPQEAQNVFDNLIADGHRPSLVTYTTLLSALTVQKRFKFIQSVILMVEENGM 139
Query: 61 EPDSIFFNAVINAFSEAGNVEEAMIAFQKMKASGLRPSTSTFNTLIKGYGIAGKPEETIE 120
EPDSIFFNAVINAFSEAGNVEEAMIAFQKMKASGLRPSTSTFNTLIKGYGIAGKPEETIE
Sbjct: 140 EPDSIFFNAVINAFSEAGNVEEAMIAFQKMKASGLRPSTSTFNTLIKGYGIAGKPEETIE 199
Query: 121 LLDLMYREETLKPNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVTYNTIATAH 180
LLDLMYREETLKPNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVTYNTIATAH
Sbjct: 200 LLDLMYREETLKPNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVTYNTIATAH 259
Query: 181 AQSGETDQAEKMILQMQDNGIRPNQRTCSIIACGYCKEGRLKEAMRFIYRMKDLGVRPNL 240
AQSGETDQAEKMILQMQDNGIRPNQRTCSIIACGYCKEGRLKEAMRFIYRMKDLGVRPNL
Sbjct: 260 AQSGETDQAEKMILQMQDNGIRPNQRTCSIIACGYCKEGRLKEAMRFIYRMKDLGVRPNL 319
Query: 241 VLFNSLIKGFVESMDRDGVDKVLTLMEEFGVKPDVITFSTIMNAWSTAGFMVKCREVFDE 300
VLFNSLIKGFVESMDRDGVDKVLTLMEEFGVKPDVITFSTIMNAWSTAGFMVKCREVFDE
Sbjct: 320 VLFNSLIKGFVESMDRDGVDKVLTLMEEFGVKPDVITFSTIMNAWSTAGFMVKCREVFDE 379
Query: 301 MVKAGIEPDTHAYSILAKGYVRSQEPEKAEELLNTMTRYGKRPNVVIFTTIISGWCSSGR 360
MVKAGIEPDTHAYSILAKGYVRSQEPEKAEELLNTMTRYGKRPNVVIFTTIISGWCSSGR
Sbjct: 380 MVKAGIEPDTHAYSILAKGYVRSQEPEKAEELLNTMTRYGKRPNVVIFTTIISGWCSSGR 439
Query: 361 MDNAIKILNKMCEYRVSPNLKTFETIIWG 390
MDNAIKILNKMCEYRVSPNLKTFETIIWG
Sbjct: 440 MDNAIKILNKMCEYRVSPNLKTFETIIWG 468
BLAST of MS008408 vs. ExPASy TrEMBL
Match:
A0A1S4E5M4 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g25630 OS=Cucumis melo OX=3656 GN=LOC103503718 PE=4 SV=1)
HSP 1 Score: 649.4 bits (1674), Expect = 9.3e-183
Identity = 321/389 (82.52%), Postives = 356/389 (91.52%), Query Frame = 0
Query: 1 MNILIERGKPQEAQNVFDNLIADGHRPSLVTYTTLLSALTVQKRFKFIQSVILMVEENGM 60
MNILIERGKPQ AQN+FDNLIA+GHRPSLVTYT+LL+ALTVQKRFK I SVI MVEE GM
Sbjct: 79 MNILIERGKPQGAQNIFDNLIAEGHRPSLVTYTSLLTALTVQKRFKCIYSVIQMVEEKGM 138
Query: 61 EPDSIFFNAVINAFSEAGNVEEAMIAFQKMKASGLRPSTSTFNTLIKGYGIAGKPEETIE 120
PDSIFFNAVINAFSEAG VEEAM+ F+KMKASGLRP TSTFNTLIKGYGIAGKPEET++
Sbjct: 139 IPDSIFFNAVINAFSEAGKVEEAMLTFRKMKASGLRPITSTFNTLIKGYGIAGKPEETVQ 198
Query: 121 LLDLMYREETLKPNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVTYNTIATAH 180
LLDLMYREE LKPNLRTCNVLVRAWCKKKKI EAWNVV+++ +LGIKPDAVTYNT+ATA+
Sbjct: 199 LLDLMYREENLKPNLRTCNVLVRAWCKKKKISEAWNVVQSIGSLGIKPDAVTYNTLATAY 258
Query: 181 AQSGETDQAEKMILQMQDNGIRPNQRTCSIIACGYCKEGRLKEAMRFIYRMKDLGVRPNL 240
AQ+GET++AE++I MQDN ++PNQ+TCSI+A GYCKE RLKEAMRF+Y+MK+LGV+PNL
Sbjct: 259 AQNGETERAEEIIQVMQDNNVQPNQQTCSIVAFGYCKEXRLKEAMRFVYKMKNLGVQPNL 318
Query: 241 VLFNSLIKGFVESMDRDGVDKVLTLMEEFGVKPDVITFSTIMNAWSTAGFMVKCREVFDE 300
V FNSLIKGF+E MDRDGV+KVL LM+EFGV+PDVIT+ST+MNAWS AGFM KCREVFDE
Sbjct: 319 VPFNSLIKGFMELMDRDGVNKVLMLMKEFGVEPDVITYSTVMNAWSKAGFMAKCREVFDE 378
Query: 301 MVKAGIEPDTHAYSILAKGYVRSQEPEKAEELLNTMTRYGKRPNVVIFTTIISGWCSSGR 360
MV AGIEPD HAYSILAKGYVRSQEP+KAE+ T Y KRPNVVIFTTIISGWCSSGR
Sbjct: 379 MVNAGIEPDAHAYSILAKGYVRSQEPKKAED----XTSYRKRPNVVIFTTIISGWCSSGR 438
Query: 361 MDNAIKILNKMCEYRVSPNLKTFETIIWG 390
MDNAIKILNKMCEY VSPNLKTFETII G
Sbjct: 439 MDNAIKILNKMCEYGVSPNLKTFETIICG 463
BLAST of MS008408 vs. ExPASy TrEMBL
Match:
A0A7N2N4G4 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)
HSP 1 Score: 617.5 bits (1591), Expect = 3.9e-173
Identity = 293/389 (75.32%), Postives = 347/389 (89.20%), Query Frame = 0
Query: 1 MNILIERGKPQEAQNVFDNLIADGHRPSLVTYTTLLSALTVQKRFKFIQSVILMVEENGM 60
MNILIERGKPQE +++FD+LI GHRPSLVTYTTLL+ALT+QKRF+ I +I VEEN M
Sbjct: 79 MNILIERGKPQEVESIFDSLIEGGHRPSLVTYTTLLAALTIQKRFESIHLIISQVEENEM 138
Query: 61 EPDSIFFNAVINAFSEAGNVEEAMIAFQKMKASGLRPSTSTFNTLIKGYGIAGKPEETIE 120
+PDSIFFNAVINAFSE+GN+EEAM F KMK +GL+P+T T+NTLIKGYGIAGKP E+++
Sbjct: 139 KPDSIFFNAVINAFSESGNIEEAMETFWKMKENGLKPTTCTYNTLIKGYGIAGKPTESLK 198
Query: 121 LLDLMYREETLKPNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVTYNTIATAH 180
LLDLM +E +KPNLRT N+LVRAWCKK I EAWNVV M+ G++PDAVTYNTI+TA+
Sbjct: 199 LLDLMSQEGNVKPNLRTYNMLVRAWCKKNNITEAWNVVCKMVDSGMQPDAVTYNTISTAY 258
Query: 181 AQSGETDQAEKMILQMQDNGIRPNQRTCSIIACGYCKEGRLKEAMRFIYRMKDLGVRPNL 240
AQ+GETD+AE+MIL+MQ+N ++PN+RTC II GYCKEG+LKEA+RF++RMKDLGV PNL
Sbjct: 259 AQNGETDRAERMILEMQNNKVQPNERTCGIIISGYCKEGKLKEALRFVHRMKDLGVHPNL 318
Query: 241 VLFNSLIKGFVESMDRDGVDKVLTLMEEFGVKPDVITFSTIMNAWSTAGFMVKCREVFDE 300
V+FNSLIKGFVE MDRDG D+V+TLM EFGVKPDVIT+STIMNAWSTAGFM KCRE+FD+
Sbjct: 319 VIFNSLIKGFVEIMDRDGADEVMTLMAEFGVKPDVITYSTIMNAWSTAGFMEKCREIFDD 378
Query: 301 MVKAGIEPDTHAYSILAKGYVRSQEPEKAEELLNTMTRYGKRPNVVIFTTIISGWCSSGR 360
M+KAGIEPD HAYSILAKGYVR+QEPEKA+ELL M + G RPNVVIFTTIISGWCSSG+
Sbjct: 379 MMKAGIEPDAHAYSILAKGYVRAQEPEKAKELLTAMIKSGVRPNVVIFTTIISGWCSSGK 438
Query: 361 MDNAIKILNKMCEYRVSPNLKTFETIIWG 390
MD+AIK+ N+MCEY+VSPNLKTFET+IWG
Sbjct: 439 MDHAIKVFNEMCEYKVSPNLKTFETLIWG 467
BLAST of MS008408 vs. ExPASy TrEMBL
Match:
A0A5N6R833 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_013343 PE=4 SV=1)
HSP 1 Score: 616.3 bits (1588), Expect = 8.7e-173
Identity = 288/389 (74.04%), Postives = 347/389 (89.20%), Query Frame = 0
Query: 1 MNILIERGKPQEAQNVFDNLIADGHRPSLVTYTTLLSALTVQKRFKFIQSVILMVEENGM 60
MNILIERGKPQE Q++FD+LI GH+PSL+TYTTLL+ALT+QKRFK I S+I VEENGM
Sbjct: 79 MNILIERGKPQEVQSIFDSLIEGGHKPSLITYTTLLAALTIQKRFKSIHSIISQVEENGM 138
Query: 61 EPDSIFFNAVINAFSEAGNVEEAMIAFQKMKASGLRPSTSTFNTLIKGYGIAGKPEETIE 120
+PDS+FFNAVINAFSE+GN+EEAM F +MK SGL+P+T T+N LIKGYGIAGKP E+++
Sbjct: 139 KPDSVFFNAVINAFSESGNIEEAMETFWEMKKSGLKPTTITYNALIKGYGIAGKPAESLK 198
Query: 121 LLDLMYREETLKPNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVTYNTIATAH 180
LLDLM +E +KPNLRT NVLVRAWCKK I EAWN+V ++A G++PDAVTYNTI+TA+
Sbjct: 199 LLDLMSQEGNVKPNLRTYNVLVRAWCKKNNIVEAWNLVHKIVACGMQPDAVTYNTISTAY 258
Query: 181 AQSGETDQAEKMILQMQDNGIRPNQRTCSIIACGYCKEGRLKEAMRFIYRMKDLGVRPNL 240
AQ+GETD+AE MIL+MQ N ++PN+RTC II GYCKEG+LKEA+RF+YRMKDLG+ PNL
Sbjct: 259 AQNGETDRAEGMILEMQKNRVQPNERTCGIIISGYCKEGKLKEALRFVYRMKDLGLHPNL 318
Query: 241 VLFNSLIKGFVESMDRDGVDKVLTLMEEFGVKPDVITFSTIMNAWSTAGFMVKCREVFDE 300
V+FNSLIKGFV +MDRDGVD+V+TLM EFGVKPDVIT+STIMNAWSTAGFM KCRE+F++
Sbjct: 319 VIFNSLIKGFVNTMDRDGVDEVMTLMNEFGVKPDVITYSTIMNAWSTAGFMEKCREIFED 378
Query: 301 MVKAGIEPDTHAYSILAKGYVRSQEPEKAEELLNTMTRYGKRPNVVIFTTIISGWCSSGR 360
M+KAGI+PD HAYSILAKGY R++EPEKAEELL MT+ G RPNVVIFTT+ISGWCS+GR
Sbjct: 379 MMKAGIKPDAHAYSILAKGYARAREPEKAEELLTGMTQSGVRPNVVIFTTVISGWCSTGR 438
Query: 361 MDNAIKILNKMCEYRVSPNLKTFETIIWG 390
M+ A+K+ +KMCEY+VSPNLKTFET+IWG
Sbjct: 439 MERAVKVFDKMCEYKVSPNLKTFETLIWG 467
BLAST of MS008408 vs. TAIR 10
Match:
AT5G25630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 510.4 bits (1313), Expect = 1.3e-144
Identity = 246/393 (62.60%), Postives = 315/393 (80.15%), Query Frame = 0
Query: 1 MNILIERGKPQEAQNVFDNLIADGHRPSLVTYTTLLSALTVQKRFKFIQSVILMVEENGM 60
MN+LIERG+P EAQ VF L GHRPSL++YTTLL+A+TVQK++ I S++ VE++G
Sbjct: 52 MNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGT 111
Query: 61 EPDSIFFNAVINAFSEAGNVEEAMIAFQKMKASGLRPSTSTFNTLIKGYGIAGKPEETIE 120
+ DSIFFNAVINAFSE+GN+E+A+ A KMK GL P+TST+NTLIKGYGIAGKPE + E
Sbjct: 112 KLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSE 171
Query: 121 LLDLMYREETLK--PNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVTYNTIAT 180
LLDLM E + PN+RT NVLV+AWCKKKK+ EAW VV+ M G++PD VTYNTIAT
Sbjct: 172 LLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIAT 231
Query: 181 AHAQSGETDQAEKMILQ--MQDNGIRPNQRTCSIIACGYCKEGRLKEAMRFIYRMKDLGV 240
+ Q GET +AE +++ + +PN RTC I+ GYC+EGR+++ +RF+ RMK++ V
Sbjct: 232 CYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRV 291
Query: 241 RPNLVLFNSLIKGFVESMDRDGVDKVLTLMEEFGVKPDVITFSTIMNAWSTAGFMVKCRE 300
NLV+FNSLI GFVE MDRDG+D+VLTLM+E VK DVIT+ST+MNAWS+AG+M K +
Sbjct: 292 EANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQ 351
Query: 301 VFDEMVKAGIEPDTHAYSILAKGYVRSQEPEKAEELLNTMTRYGKRPNVVIFTTIISGWC 360
VF EMVKAG++PD HAYSILAKGYVR++EP+KAEELL T+ RPNVVIFTT+ISGWC
Sbjct: 352 VFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI-VESRPNVVIFTTVISGWC 411
Query: 361 SSGRMDNAIKILNKMCEYRVSPNLKTFETIIWG 390
S+G MD+A+++ NKMC++ VSPN+KTFET++WG
Sbjct: 412 SNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWG 443
BLAST of MS008408 vs. TAIR 10
Match:
AT5G21222.1 (protein kinase family protein )
HSP 1 Score: 498.4 bits (1282), Expect = 5.1e-141
Identity = 235/391 (60.10%), Postives = 311/391 (79.54%), Query Frame = 0
Query: 1 MNILIERGKPQEAQNVFDNLIADGHRPSLVTYTTLLSALTVQKRFKFIQSVILMVEENGM 60
MN LIERG+PQEA ++F+ LI +GH+PSL+TYTTL++ALT QK F + S+I VE+NG+
Sbjct: 326 MNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGL 385
Query: 61 EPDSIFFNAVINAFSEAGNVEEAMIAFQKMKASGLRPSTSTFNTLIKGYGIAGKPEETIE 120
+PD+I FNA+INA SE+GN+++AM F+KMK SG +P+ STFNTLIKGYG GK EE+
Sbjct: 386 KPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSR 445
Query: 121 LLDLMYREETLKPNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVTYNTIATAH 180
LLD+M R+E L+PN RTCN+LV+AWC ++KI EAWN+V M + G+KPD VT+NT+A A+
Sbjct: 446 LLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAY 505
Query: 181 AQSGETDQAEKMIL-QMQDNGIRPNQRTCSIIACGYCKEGRLKEAMRFIYRMKDLGVRPN 240
A+ G T AE MI+ +M N ++PN RTC I GYC+EG+++EA+RF YRMK+LGV PN
Sbjct: 506 ARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPN 565
Query: 241 LVLFNSLIKGFVESMDRDGVDKVLTLMEEFGVKPDVITFSTIMNAWSTAGFMVKCREVFD 300
L +FNSLIKGF+ D DGV +V+ LMEEFGVKPDV+TFST+MNAWS+ G M +C E++
Sbjct: 566 LFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYT 625
Query: 301 EMVKAGIEPDTHAYSILAKGYVRSQEPEKAEELLNTMTRYGKRPNVVIFTTIISGWCSSG 360
+M++ GI+PD HA+SILAKGY R+ EPEKAE++LN M ++G RPNVVI+T IISGWCS+G
Sbjct: 626 DMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAG 685
Query: 361 RMDNAIKILNKMCE-YRVSPNLKTFETIIWG 390
M A+++ KMC +SPNL T+ET+IWG
Sbjct: 686 EMKKAMQVYKKMCGIVGLSPNLTTYETLIWG 716
BLAST of MS008408 vs. TAIR 10
Match:
AT5G25630.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 496.5 bits (1277), Expect = 1.9e-140
Identity = 246/418 (58.85%), Postives = 315/418 (75.36%), Query Frame = 0
Query: 1 MNILIERGKPQEAQNVFDNLIADGHRPSLVTYTTLLSALTVQKRFKFIQSVILMVEENGM 60
MN+LIERG+P EAQ VF L GHRPSL++YTTLL+A+TVQK++ I S++ VE++G
Sbjct: 52 MNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGT 111
Query: 61 EPDSIFFNAVINAFSEAGNVEEAMIAFQKMKASGLRPSTSTFNTLIKGYGIAGKPEETIE 120
+ DSIFFNAVINAFSE+GN+E+A+ A KMK GL P+TST+NTLIKGYGIAGKPE + E
Sbjct: 112 KLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSE 171
Query: 121 LLDLMYREETLK--PNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVTYNTIAT 180
LLDLM E + PN+RT NVLV+AWCKKKK+ EAW VV+ M G++PD VTYNTIAT
Sbjct: 172 LLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIAT 231
Query: 181 AHAQSGETDQAEKMILQ--MQDNGIRPNQRTCSIIACGYCKEGRLKEAMRFIYRMKDLGV 240
+ Q GET +AE +++ + +PN RTC I+ GYC+EGR+++ +RF+ RMK++ V
Sbjct: 232 CYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRV 291
Query: 241 RPNLVLFNSLIKGFVESMDRDGVD-------------------------KVLTLMEEFGV 300
NLV+FNSLI GFVE MDRDG+D +VLTLM+E V
Sbjct: 292 EANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNV 351
Query: 301 KPDVITFSTIMNAWSTAGFMVKCREVFDEMVKAGIEPDTHAYSILAKGYVRSQEPEKAEE 360
K DVIT+ST+MNAWS+AG+M K +VF EMVKAG++PD HAYSILAKGYVR++EP+KAEE
Sbjct: 352 KADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEE 411
Query: 361 LLNTMTRYGKRPNVVIFTTIISGWCSSGRMDNAIKILNKMCEYRVSPNLKTFETIIWG 390
LL T+ RPNVVIFTT+ISGWCS+G MD+A+++ NKMC++ VSPN+KTFET++WG
Sbjct: 412 LLETLI-VESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWG 468
BLAST of MS008408 vs. TAIR 10
Match:
AT1G62930.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 204.9 bits (520), Expect = 1.2e-52
Identity = 117/384 (30.47%), Postives = 201/384 (52.34%), Query Frame = 0
Query: 4 LIERGKPQEAQNVFDNLIADGHRPSLVTYTTLLSALTVQKRFKFIQSVILMVEENGMEPD 63
L K EA + D ++A G +P L TY T+++ L + S++ +E+ +E D
Sbjct: 195 LFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEAD 254
Query: 64 SIFFNAVINAFSEAGNVEEAMIAFQKMKASGLRPSTSTFNTLIKGYGIAGKPEETIELLD 123
+ + +I+A NV +A+ F +M G+RP+ T+N+LI+ G+ + LL
Sbjct: 255 VVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 314
Query: 124 LMYREETLKPNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVTYNTIATAHAQS 183
M E + PN+ T + L+ A+ K+ K+ EA + + MI I PD TY+++
Sbjct: 315 DMI-ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 374
Query: 184 GETDQAEKMILQMQDNGIRPNQRTCSIIACGYCKEGRLKEAMRFIYRMKDLGVRPNLVLF 243
D+A+ M M PN T + + G+CK R++E M M G+ N V +
Sbjct: 375 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 434
Query: 244 NSLIKGFVESMDRDGVDKVLTLMEEFGVKPDVITFSTIMNAWSTAGFMVKCREVFDEMVK 303
N+LI+G ++ D D K+ M GV PD+IT+S +++ G + K VF+ + K
Sbjct: 435 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 494
Query: 304 AGIEPDTHAYSILAKGYVRSQEPEKAEELLNTMTRYGKRPNVVIFTTIISGWCSSGRMDN 363
+ +EPD + Y+I+ +G ++ + E +L +++ G +PNV+I+TT+ISG+C G +
Sbjct: 495 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 554
Query: 364 AIKILNKMCEYRVSPNLKTFETII 388
A + +M E PN T+ T+I
Sbjct: 555 ADALFREMKEDGTLPNSGTYNTLI 577
BLAST of MS008408 vs. TAIR 10
Match:
AT1G12300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 199.9 bits (507), Expect = 3.7e-51
Identity = 114/381 (29.92%), Postives = 202/381 (53.02%), Query Frame = 0
Query: 9 KPQEAQNVFDNLIADGHRPSLVTYTTLLSALTVQKRFKFIQSVILMVEENGMEPDSIFFN 68
K +A ++F ++I P+++ ++ L SA+ K++ + ++ +E G+ + +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 69 AVINAFSEAGNVEEAMIAFQKMKASGLRPSTSTFNTLIKGYGIAGKPEETIELLDLMYRE 128
+IN F + A A K+ G P+T TF+TLI G + G+ E +EL+D M E
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV-E 187
Query: 129 ETLKPNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVTYNTIATAHAQSGETDQ 188
KP+L T N LV C K EA +++ M+ G +P+AVTY + +SG+T
Sbjct: 188 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 247
Query: 189 AEKMILQMQDNGIRPNQRTCSIIACGYCKEGRLKEAMRFIYRMKDLGVRPNLVLFNSLIK 248
A +++ +M++ I+ + SII G CK G L A M+ G+ N++ +N LI
Sbjct: 248 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 307
Query: 249 GFVESMDRDGVDKVLTLMEEFGVKPDVITFSTIMNAWSTAGFMVKCREVFDEMVKAGIEP 308
GF + D K+L M + + P+V+TFS +++++ G + + E+ EM+ GI P
Sbjct: 308 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 367
Query: 309 DTHAYSILAKGYVRSQEPEKAEELLNTMTRYGKRPNVVIFTTIISGWCSSGRMDNAIKIL 368
DT Y+ L G+ + +KA ++++ M G PN+ F +I+G+C + R+D+ +++
Sbjct: 368 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 427
Query: 369 NKMCEYRVSPNLKTFETIIWG 390
KM V + T+ T+I G
Sbjct: 428 RKMSLRGVVADTVTYNTLIQG 447
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022141338.1 | 4.2e-222 | 100.00 | pentatricopeptide repeat-containing protein At5g25630 isoform X2 [Momordica char... | [more] |
XP_022141330.1 | 4.2e-222 | 100.00 | pentatricopeptide repeat-containing protein At5g25630 isoform X1 [Momordica char... | [more] |
XP_038898467.1 | 4.0e-204 | 90.75 | pentatricopeptide repeat-containing protein At5g25630 isoform X2 [Benincasa hisp... | [more] |
XP_038898466.1 | 4.0e-204 | 90.75 | pentatricopeptide repeat-containing protein At5g25630 isoform X1 [Benincasa hisp... | [more] |
XP_016903528.1 | 1.9e-182 | 82.52 | PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g... | [more] |
Match Name | E-value | Identity | Description | |
Q8GZ63 | 1.8e-143 | 62.60 | Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana OX... | [more] |
Q8S9D1 | 7.2e-140 | 60.10 | Pentatricopeptide repeat-containing protein At5g21222 OS=Arabidopsis thaliana OX... | [more] |
Q9LQ14 | 1.6e-51 | 30.47 | Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop... | [more] |
Q0WKV3 | 5.3e-50 | 29.92 | Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop... | [more] |
Q76C99 | 9.0e-50 | 26.74 | Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CJL5 | 2.0e-222 | 100.00 | pentatricopeptide repeat-containing protein At5g25630 isoform X2 OS=Momordica ch... | [more] |
A0A6J1CHS1 | 2.0e-222 | 100.00 | pentatricopeptide repeat-containing protein At5g25630 isoform X1 OS=Momordica ch... | [more] |
A0A1S4E5M4 | 9.3e-183 | 82.52 | LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g25630 OS=Cu... | [more] |
A0A7N2N4G4 | 3.9e-173 | 75.32 | Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1 | [more] |
A0A5N6R833 | 8.7e-173 | 74.04 | Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_013343 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT5G25630.1 | 1.3e-144 | 62.60 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G21222.1 | 5.1e-141 | 60.10 | protein kinase family protein | [more] |
AT5G25630.2 | 1.9e-140 | 58.85 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G62930.1 | 1.2e-52 | 30.47 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G12300.1 | 3.7e-51 | 29.92 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |