Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTCACTGGAAATTTGAATGCCCTTTTCGCCTTCTCCTCGTTCACCACAAACTCTCTCTCGATCTGACTTACAGCCAACAATGGATCCCAATTCACCAATTCGAGAATCCTCTTCCCATCATCTTCAACCACAACTCTGAAGTAATTCGGATACTTCGCTACTCGATCTCTGAAATCCTCTGGAATCCCAAACAGCGACCTACAGTGGTAGATTTTGCTCAATGGAATCCGCTTATTCGCCGACATCATCAGCAATTTCCGCACAGTTCTAACTCGGTCCATCTCCATGGAGTCCATAATCCGTCTCTCTTCCTCGATCAACCCCTCCATGAACTCCGTAAATCCGAACCACATTTTCCCGTCGGCGTGACGGTAGGGTTCAAAAAGGAGCGGGTGGCGCTCGATGGATCGAGCCACTTTGCGACCTCTCGGAAAGCCGAGTTCGCGGTAGAGCTTGCCGGCATCGTCGAGGCGAACAACGTGCTCCGGCTGCTTCAAGAGGAAATCCTTGGACCTGAAAAGAAACCTGAAGAAGGAATCCGCTTCGACGATTCGCTCGAAGTGGGAGACGCGACTGGATTCCGATTGCACGAGCTTGATCCTAGGGCTTTCGCGTTTCTTGCGTTTCTTCTTGAACTTCTT
mRNA sequence
ATGTTTCACTGGAAATTTGAATGCCCTTTTCGCCTTCTCCTCGTTCACCACAAACTCTCTCTCGATCTGACTTACAGCCAACAATGGATCCCAATTCACCAATTCGAGAATCCTCTTCCCATCATCTTCAACCACAACTCTGAAGTAATTCGGATACTTCGCTACTCGATCTCTGAAATCCTCTGGAATCCCAAACAGCGACCTACAGTGGTAGATTTTGCTCAATGGAATCCGCTTATTCGCCGACATCATCAGCAATTTCCGCACAGTTCTAACTCGGTCCATCTCCATGGAGTCCATAATCCGTCTCTCTTCCTCGATCAACCCCTCCATGAACTCCGTAAATCCGAACCACATTTTCCCGTCGGCGTGACGGTAGGGTTCAAAAAGGAGCGGGTGGCGCTCGATGGATCGAGCCACTTTGCGACCTCTCGGAAAGCCGAGTTCGCGGTAGAGCTTGCCGGCATCGTCGAGGCGAACAACGTGCTCCGGCTGCTTCAAGAGGAAATCCTTGGACCTGAAAAGAAACCTGAAGAAGGAATCCGCTTCGACGATTCGCTCGAAGTGGGAGACGCGACTGGATTCCGATTGCACGAGCTTGATCCTAGGGCTTTCGCGTTTCTTGCGTTTCTTCTTGAACTTCTT
Coding sequence (CDS)
ATGTTTCACTGGAAATTTGAATGCCCTTTTCGCCTTCTCCTCGTTCACCACAAACTCTCTCTCGATCTGACTTACAGCCAACAATGGATCCCAATTCACCAATTCGAGAATCCTCTTCCCATCATCTTCAACCACAACTCTGAAGTAATTCGGATACTTCGCTACTCGATCTCTGAAATCCTCTGGAATCCCAAACAGCGACCTACAGTGGTAGATTTTGCTCAATGGAATCCGCTTATTCGCCGACATCATCAGCAATTTCCGCACAGTTCTAACTCGGTCCATCTCCATGGAGTCCATAATCCGTCTCTCTTCCTCGATCAACCCCTCCATGAACTCCGTAAATCCGAACCACATTTTCCCGTCGGCGTGACGGTAGGGTTCAAAAAGGAGCGGGTGGCGCTCGATGGATCGAGCCACTTTGCGACCTCTCGGAAAGCCGAGTTCGCGGTAGAGCTTGCCGGCATCGTCGAGGCGAACAACGTGCTCCGGCTGCTTCAAGAGGAAATCCTTGGACCTGAAAAGAAACCTGAAGAAGGAATCCGCTTCGACGATTCGCTCGAAGTGGGAGACGCGACTGGATTCCGATTGCACGAGCTTGATCCTAGGGCTTTCGCGTTTCTTGCGTTTCTTCTTGAACTTCTT
Protein sequence
MFHWKFECPFRLLLVHHKLSLDLTYSQQWIPIHQFENPLPIIFNHNSEVIRILRYSISEILWNPKQRPTVVDFAQWNPLIRRHHQQFPHSSNSVHLHGVHNPSLFLDQPLHELRKSEPHFPVGVTVGFKKERVALDGSSHFATSRKAEFAVELAGIVEANNVLRLLQEEILGPEKKPEEGIRFDDSLEVGDATGFRLHELDPRAFAFLAFLLELL
Homology
BLAST of MS008393 vs. NCBI nr
Match:
PON50357.1 (hypothetical protein TorRG33x02_314870 [Trema orientale])
HSP 1 Score: 208.0 bits (528), Expect = 8.2e-50
Identity = 101/213 (47.42%), Postives = 143/213 (67.14%), Query Frame = 0
Query: 1 MFHWKFECPFRLLLVHHKLSLDLTYSQQWIPIHQFENPLPIIFNHNSEVIRILRYSISEI 60
MFH + E P LLL++HKL+L + Q +PIHQF+N PII NHN +VIR+ R + EI
Sbjct: 1 MFHCELESPLNLLLINHKLALKRAHRQTRVPIHQFKNSPPIILNHNPKVIRVFRNPVPEI 60
Query: 61 LWNPKQRPTVVDFAQWNPLIRRHHQQFPHSSNSVHLHGVHNPSLFLDQPLHELRKSEPHF 120
+ NPKQ+P +++ Q NPL HHQQ + SN +HLHG+HN L ++ LHE+ + EPH
Sbjct: 61 IRNPKQQPAMINLTQRNPLPGGHHQQLTYLSNPIHLHGIHNRPLLFEKLLHEIGEPEPHL 120
Query: 121 PVGVTVGFKKERVALDGSSHFATSRKAEFAVELAGIVEANNVLRLLQEEILGPEKKPEEG 180
V V + + +R+ALD H +++ ++E AVEL+GIVEA NV+ LL EE+LGP+++ EEG
Sbjct: 121 AVIVAIRLENQRMALDEPCHLSSTGESELAVELSGIVEAENVVGLLGEELLGPDEESEEG 180
Query: 181 IRFDDSLEVGDATGFRLHELDPRAFAFLAFLLE 214
+ DD+L+ D+ G L +L RAF L L E
Sbjct: 181 VTLDDALQRWDSIGLGLDQLGSRAFLLLPLLPE 213
BLAST of MS008393 vs. NCBI nr
Match:
PON47377.1 (hypothetical protein PanWU01x14_244610 [Parasponia andersonii])
HSP 1 Score: 205.7 bits (522), Expect = 4.1e-49
Identity = 100/213 (46.95%), Postives = 142/213 (66.67%), Query Frame = 0
Query: 1 MFHWKFECPFRLLLVHHKLSLDLTYSQQWIPIHQFENPLPIIFNHNSEVIRILRYSISEI 60
MFH + E P LL++HKL+L +SQ +PIHQF+N PII NHN +VI + R + EI
Sbjct: 1 MFHCELESPLNFLLINHKLALKRAHSQTRVPIHQFKNSPPIILNHNPKVIWVFRNPVPEI 60
Query: 61 LWNPKQRPTVVDFAQWNPLIRRHHQQFPHSSNSVHLHGVHNPSLFLDQPLHELRKSEPHF 120
+ NPKQ+P +++F Q NPL HHQQ + SN +HLHG+HN L + LHE+ + EPH
Sbjct: 61 IRNPKQQPAMINFTQRNPLPGGHHQQLTYLSNPIHLHGIHNRPLLFKKLLHEIGEPEPHL 120
Query: 121 PVGVTVGFKKERVALDGSSHFATSRKAEFAVELAGIVEANNVLRLLQEEILGPEKKPEEG 180
V V + + +R+ALD H +++ ++E AVEL+GIV+A NV+ LL EE+LGP+++ EEG
Sbjct: 121 AVIVAIRLENQRMALDEPCHLSSTGESELAVELSGIVKAENVVGLLGEELLGPDEESEEG 180
Query: 181 IRFDDSLEVGDATGFRLHELDPRAFAFLAFLLE 214
+ DD+L+ D+ G L +L RAF L L E
Sbjct: 181 VTLDDALQCWDSIGLGLDQLGSRAFLLLPLLPE 213
BLAST of MS008393 vs. NCBI nr
Match:
KCW66536.1 (hypothetical protein EUGRSUZ_F00333 [Eucalyptus grandis])
HSP 1 Score: 164.1 bits (414), Expect = 1.4e-36
Identity = 85/192 (44.27%), Postives = 124/192 (64.58%), Query Frame = 0
Query: 1 MFHWKFECPFRLLLVHHKLSLDLTYSQQWIPIHQFENPLPIIFNHNSEVIRILRYSISEI 60
M H + + R + + H+L LDL + Q +PIH+ E+ PI+ ++ +V+RIL+ I EI
Sbjct: 77 MLHGESKGLLRPIFIGHELPLDLAHRQMRVPIHELEHSPPIVIRNHPKVVRILQSPIPEI 136
Query: 61 LWNPKQRPTVVDFAQWNPLIRRHHQQFPHSSNSVHLHGVHNPSLFLDQPLHELRKSEPHF 120
L NP+Q P V++ Q + L+ HH+Q PH ++ V LH V +P L L+Q LHE R+ EPH
Sbjct: 137 LRNPEQGPAVMNLTQRDSLVGGHHEQLPHLADPVRLHRVRDPPLLLEQLLHEGREPEPHL 196
Query: 121 PVGVTVGFKKERVALDGSSHFATSRKAEFAVELAGIVEANNVLRLLQEEILGPEKKPEEG 180
VGV V ++ERVAL+G+ A+ +AE AVELAG+VEA + LRL EE P ++ E G
Sbjct: 197 AVGVAVRLEQERVALEGADDLASPGEAELAVELAGVVEAEDALRLPGEEGAAPGEEAEAG 256
Query: 181 IRFDDSLEVGDA 193
+ D+ LE G+A
Sbjct: 257 VAGDEGLEGGEA 268
BLAST of MS008393 vs. NCBI nr
Match:
KAA0038704.1 (hypothetical protein E6C27_scaffold92G002480 [Cucumis melo var. makuwa] >TYK31316.1 hypothetical protein E5676_scaffold455G006150 [Cucumis melo var. makuwa])
HSP 1 Score: 91.7 bits (226), Expect = 8.5e-15
Identity = 50/83 (60.24%), Postives = 63/83 (75.90%), Query Frame = 0
Query: 133 VALDGSSHFATSRKAEFAVELAGIVEANNVLRLLQEEILGPEKKPEEGIRFDDSLEVGDA 192
+A + SS FATS KA+FA++LAGI+E NVLRLL +EILG +K+ EEGI +D+LEV +A
Sbjct: 1 MAFNRSSDFATSWKAKFAIKLAGIIETKNVLRLLGKEILGLKKESEEGIGLEDALEVRNA 60
Query: 193 TGFRLHELDPRAFAFLAFLLELL 216
GF L+EL RAF LAFL E L
Sbjct: 61 IGFGLNELGSRAFVLLAFLPEFL 83
BLAST of MS008393 vs. NCBI nr
Match:
BAT78508.1 (hypothetical protein VIGAN_02119300 [Vigna angularis var. angularis])
HSP 1 Score: 83.6 bits (205), Expect = 2.3e-12
Identity = 39/118 (33.05%), Postives = 72/118 (61.02%), Query Frame = 0
Query: 1 MFHWKFECPFRLLLVHHKLSLDLTYSQQWIPIHQFENPLPIIFNHNSEVIRILRYSISEI 60
+ H K + P +LV+++L L T+ ++ +P+HQ ++PL + N E +R+ ++EI
Sbjct: 144 ILHRKPKLPLSRILVNNELPLKSTHGEKRVPLHQLQHPLAVAINRYFEKVRVFGDPVAEI 203
Query: 61 LWNPKQRPTVVDFAQWNPLIRRHHQQFPHSSNSVHLHGVHNPSLFLDQPLHELRKSEP 119
+ + K+ VVDFAQ N + R HH++F + ++V H VH L ++ LHE+ +++P
Sbjct: 204 IGDAKEGSAVVDFAQGNAVARGHHKEFANLLDAVQFHCVHEGVLLSEKVLHEISEAKP 261
BLAST of MS008393 vs. ExPASy TrEMBL
Match:
A0A0A0LHJ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G889730 PE=4 SV=1)
HSP 1 Score: 286.2 bits (731), Expect = 1.1e-73
Identity = 142/215 (66.05%), Postives = 170/215 (79.07%), Query Frame = 0
Query: 1 MFHWKFECPFRLLLVHHKLSLDLTYSQQWIPIHQFENPLPIIFNHNSEVIRILRYSISEI 60
MFH K E PF L+LVHHKLSL+LT SQ+ +PIHQF++PLPIIFNH SEVIRIL +SIS+I
Sbjct: 1 MFHRKLEQPFHLILVHHKLSLELTNSQRRVPIHQFQHPLPIIFNHKSEVIRILAHSISKI 60
Query: 61 LWNPKQRPTVVDFAQWNPLIRRHHQQFPHSSNSVHLHGVHNPSLFLDQPLHELRKSEPHF 120
LWN K RP +DF QWN IRRHHQQ P SSN +HLH VHN LFL Q LHELRKS+PHF
Sbjct: 61 LWNSKHRPATIDFRQWNSFIRRHHQQLPDSSNPIHLHRVHNLPLFLHQLLHELRKSKPHF 120
Query: 121 PVGVTVGFKKERVALDGSSHFATSRKAEFAVELAGIVEANNVLRLLQEEILGPEKKPEEG 180
P+GVT+GF+K+R+A + SS FATS KA+FA+ELAGI+E N+LRLL E+ILG +K+ E+G
Sbjct: 121 PIGVTIGFEKKRMAFNRSSDFATSWKAKFAIELAGIIETKNMLRLLGEKILGFKKESEDG 180
Query: 181 IRFDDSLEVGDATGFRLHELDPRAFAFLAFLLELL 216
I +D+LEV +A F L EL RA FLAFL E L
Sbjct: 181 ISLEDALEVRNAIRFGLDELGSRAIVFLAFLPEFL 215
BLAST of MS008393 vs. ExPASy TrEMBL
Match:
A0A2P5BNH1 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_314870 PE=4 SV=1)
HSP 1 Score: 208.0 bits (528), Expect = 4.0e-50
Identity = 101/213 (47.42%), Postives = 143/213 (67.14%), Query Frame = 0
Query: 1 MFHWKFECPFRLLLVHHKLSLDLTYSQQWIPIHQFENPLPIIFNHNSEVIRILRYSISEI 60
MFH + E P LLL++HKL+L + Q +PIHQF+N PII NHN +VIR+ R + EI
Sbjct: 1 MFHCELESPLNLLLINHKLALKRAHRQTRVPIHQFKNSPPIILNHNPKVIRVFRNPVPEI 60
Query: 61 LWNPKQRPTVVDFAQWNPLIRRHHQQFPHSSNSVHLHGVHNPSLFLDQPLHELRKSEPHF 120
+ NPKQ+P +++ Q NPL HHQQ + SN +HLHG+HN L ++ LHE+ + EPH
Sbjct: 61 IRNPKQQPAMINLTQRNPLPGGHHQQLTYLSNPIHLHGIHNRPLLFEKLLHEIGEPEPHL 120
Query: 121 PVGVTVGFKKERVALDGSSHFATSRKAEFAVELAGIVEANNVLRLLQEEILGPEKKPEEG 180
V V + + +R+ALD H +++ ++E AVEL+GIVEA NV+ LL EE+LGP+++ EEG
Sbjct: 121 AVIVAIRLENQRMALDEPCHLSSTGESELAVELSGIVEAENVVGLLGEELLGPDEESEEG 180
Query: 181 IRFDDSLEVGDATGFRLHELDPRAFAFLAFLLE 214
+ DD+L+ D+ G L +L RAF L L E
Sbjct: 181 VTLDDALQRWDSIGLGLDQLGSRAFLLLPLLPE 213
BLAST of MS008393 vs. ExPASy TrEMBL
Match:
A0A2P5BF08 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_244610 PE=4 SV=1)
HSP 1 Score: 205.7 bits (522), Expect = 2.0e-49
Identity = 100/213 (46.95%), Postives = 142/213 (66.67%), Query Frame = 0
Query: 1 MFHWKFECPFRLLLVHHKLSLDLTYSQQWIPIHQFENPLPIIFNHNSEVIRILRYSISEI 60
MFH + E P LL++HKL+L +SQ +PIHQF+N PII NHN +VI + R + EI
Sbjct: 1 MFHCELESPLNFLLINHKLALKRAHSQTRVPIHQFKNSPPIILNHNPKVIWVFRNPVPEI 60
Query: 61 LWNPKQRPTVVDFAQWNPLIRRHHQQFPHSSNSVHLHGVHNPSLFLDQPLHELRKSEPHF 120
+ NPKQ+P +++F Q NPL HHQQ + SN +HLHG+HN L + LHE+ + EPH
Sbjct: 61 IRNPKQQPAMINFTQRNPLPGGHHQQLTYLSNPIHLHGIHNRPLLFKKLLHEIGEPEPHL 120
Query: 121 PVGVTVGFKKERVALDGSSHFATSRKAEFAVELAGIVEANNVLRLLQEEILGPEKKPEEG 180
V V + + +R+ALD H +++ ++E AVEL+GIV+A NV+ LL EE+LGP+++ EEG
Sbjct: 121 AVIVAIRLENQRMALDEPCHLSSTGESELAVELSGIVKAENVVGLLGEELLGPDEESEEG 180
Query: 181 IRFDDSLEVGDATGFRLHELDPRAFAFLAFLLE 214
+ DD+L+ D+ G L +L RAF L L E
Sbjct: 181 VTLDDALQCWDSIGLGLDQLGSRAFLLLPLLPE 213
BLAST of MS008393 vs. ExPASy TrEMBL
Match:
A0A059BKZ7 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_F00333 PE=4 SV=1)
HSP 1 Score: 164.1 bits (414), Expect = 6.5e-37
Identity = 85/192 (44.27%), Postives = 124/192 (64.58%), Query Frame = 0
Query: 1 MFHWKFECPFRLLLVHHKLSLDLTYSQQWIPIHQFENPLPIIFNHNSEVIRILRYSISEI 60
M H + + R + + H+L LDL + Q +PIH+ E+ PI+ ++ +V+RIL+ I EI
Sbjct: 77 MLHGESKGLLRPIFIGHELPLDLAHRQMRVPIHELEHSPPIVIRNHPKVVRILQSPIPEI 136
Query: 61 LWNPKQRPTVVDFAQWNPLIRRHHQQFPHSSNSVHLHGVHNPSLFLDQPLHELRKSEPHF 120
L NP+Q P V++ Q + L+ HH+Q PH ++ V LH V +P L L+Q LHE R+ EPH
Sbjct: 137 LRNPEQGPAVMNLTQRDSLVGGHHEQLPHLADPVRLHRVRDPPLLLEQLLHEGREPEPHL 196
Query: 121 PVGVTVGFKKERVALDGSSHFATSRKAEFAVELAGIVEANNVLRLLQEEILGPEKKPEEG 180
VGV V ++ERVAL+G+ A+ +AE AVELAG+VEA + LRL EE P ++ E G
Sbjct: 197 AVGVAVRLEQERVALEGADDLASPGEAELAVELAGVVEAEDALRLPGEEGAAPGEEAEAG 256
Query: 181 IRFDDSLEVGDA 193
+ D+ LE G+A
Sbjct: 257 VAGDEGLEGGEA 268
BLAST of MS008393 vs. ExPASy TrEMBL
Match:
A0A5D3E6P3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006150 PE=4 SV=1)
HSP 1 Score: 91.7 bits (226), Expect = 4.1e-15
Identity = 50/83 (60.24%), Postives = 63/83 (75.90%), Query Frame = 0
Query: 133 VALDGSSHFATSRKAEFAVELAGIVEANNVLRLLQEEILGPEKKPEEGIRFDDSLEVGDA 192
+A + SS FATS KA+FA++LAGI+E NVLRLL +EILG +K+ EEGI +D+LEV +A
Sbjct: 1 MAFNRSSDFATSWKAKFAIKLAGIIETKNVLRLLGKEILGLKKESEEGIGLEDALEVRNA 60
Query: 193 TGFRLHELDPRAFAFLAFLLELL 216
GF L+EL RAF LAFL E L
Sbjct: 61 IGFGLNELGSRAFVLLAFLPEFL 83
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| PON50357.1 | 8.2e-50 | 47.42 | hypothetical protein TorRG33x02_314870 [Trema orientale] | [more] |
| PON47377.1 | 4.1e-49 | 46.95 | hypothetical protein PanWU01x14_244610 [Parasponia andersonii] | [more] |
| KCW66536.1 | 1.4e-36 | 44.27 | hypothetical protein EUGRSUZ_F00333 [Eucalyptus grandis] | [more] |
| KAA0038704.1 | 8.5e-15 | 60.24 | hypothetical protein E6C27_scaffold92G002480 [Cucumis melo var. makuwa] >TYK3131... | [more] |
| BAT78508.1 | 2.3e-12 | 33.05 | hypothetical protein VIGAN_02119300 [Vigna angularis var. angularis] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LHJ5 | 1.1e-73 | 66.05 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G889730 PE=4 SV=1 | [more] |
| A0A2P5BNH1 | 4.0e-50 | 47.42 | Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_314870 PE=4 SV... | [more] |
| A0A2P5BF08 | 2.0e-49 | 46.95 | Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_244610 PE... | [more] |
| A0A059BKZ7 | 6.5e-37 | 44.27 | Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_F00333 PE=4 SV... | [more] |
| A0A5D3E6P3 | 4.1e-15 | 60.24 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
