MS008376 (gene) Bitter gourd (TR) v1

Overview


Name	MS008376
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	homeobox-leucine zipper protein ATHB-16-like
Location	scaffold4: 966661 .. 967546 (+)
RNA-Seq Expression	MS008376
Synteny	MS008376

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAGATTTGGCCATTCAGAATCTCTGGATTCTTTCATCTCCATTTTCTCTCCAAAGGGTAAGTAATCCTCAAAACCAAACACCCAAAAGAAAAAGGAAAAAAAAAAAACACGGAATCAAATATCATCAGTCAAACTTTAGTTCTATTATTANGTTTTCTGAGTCTCTGTTTTTGGTTTTGTTTTCAGAGCAACCGAGCTCCACCACCGCCGGCGGCTACAGCAAGGAGTTTCAGGCAATGTTAGACAGTTTGGAGGAAGAAGAGAACAGCGAGGACGGCGGCGGCGGTCCGGCGCCGGAGAGAAAACGGCGGCTGAGGCTGGATCAAGTGAAGGCCTTGGAGAGGCATTTCGAAGTGGAAAACAAGCTGGAACCTGACAGAAAACTGAAGATTGCAGCAGAATTAGAGCTGGAGCCACGGCAAGTGACAATTTGGTTCCAAAATCGACGAGCCCGTTGGAAAACCAAGCAATTAGAGAGAGATTATGGAGTTCTTAAAGTCAATTACGATGCCCTTAAACTCGATTACGATGTTCTTGAGAAACAGAACGCTTCTCTTGCTTCGAAGGTACTCAAAATCGGCTCCATTTTTTGATTTCCCGAATTGGGTTTGCATTTTTATGCTCCAATTTTAAATTATAATGTTGGAATTTGTTGGCAGCTGAGAGAGTTGCGGGAAAAAGTAAGCAGAGAGAGCGAAGAGATGAAAATTCAAAGAGAATTCACCGCCATTGATAACTGTTCTGCAACTTCGATGATGAATTGCTTTGAAATTTCAAATCAGAGAGAGTTTATGAAGGCGACGAATGAGGAGCAGAGTTTGTTTAATGCAGAGGAGACTTGCAATTTCTGTTCTGTGGATCAAGCTCCATCTCTCCACTGG

mRNA sequence

ATGAAGAGATTTGGCCATTCAGAATCTCTGGATTCTTTCATCTCCATTTTCTCTCCAAAGGAGCAACCGAGCTCCACCACCGCCGGCGGCTACAGCAAGGAGTTTCAGGCAATGTTAGACAGTTTGGAGGAAGAAGAGAACAGCGAGGACGGCGGCGGCGGTCCGGCGCCGGAGAGAAAACGGCGGCTGAGGCTGGATCAAGTGAAGGCCTTGGAGAGGCATTTCGAAGTGGAAAACAAGCTGGAACCTGACAGAAAACTGAAGATTGCAGCAGAATTAGAGCTGGAGCCACGGCAAGTGACAATTTGGTTCCAAAATCGACGAGCCCGTTGGAAAACCAAGCAATTAGAGAGAGATTATGGAGTTCTTAAAGTCAATTACGATGCCCTTAAACTCGATTACGATGTTCTTGAGAAACAGAACGCTTCTCTTGCTTCGAAGCTGAGAGAGTTGCGGGAAAAAGTAAGCAGAGAGAGCGAAGAGATGAAAATTCAAAGAGAATTCACCGCCATTGATAACTGTTCTGCAACTTCGATGATGAATTGCTTTGAAATTTCAAATCAGAGAGAGTTTATGAAGGCGACGAATGAGGAGCAGAGTTTGTTTAATGCAGAGGAGACTTGCAATTTCTGTTCTGTGGATCAAGCTCCATCTCTCCACTGG

Coding sequence (CDS)

ATGAAGAGATTTGGCCATTCAGAATCTCTGGATTCTTTCATCTCCATTTTCTCTCCAAAGGAGCAACCGAGCTCCACCACCGCCGGCGGCTACAGCAAGGAGTTTCAGGCAATGTTAGACAGTTTGGAGGAAGAAGAGAACAGCGAGGACGGCGGCGGCGGTCCGGCGCCGGAGAGAAAACGGCGGCTGAGGCTGGATCAAGTGAAGGCCTTGGAGAGGCATTTCGAAGTGGAAAACAAGCTGGAACCTGACAGAAAACTGAAGATTGCAGCAGAATTAGAGCTGGAGCCACGGCAAGTGACAATTTGGTTCCAAAATCGACGAGCCCGTTGGAAAACCAAGCAATTAGAGAGAGATTATGGAGTTCTTAAAGTCAATTACGATGCCCTTAAACTCGATTACGATGTTCTTGAGAAACAGAACGCTTCTCTTGCTTCGAAGCTGAGAGAGTTGCGGGAAAAAGTAAGCAGAGAGAGCGAAGAGATGAAAATTCAAAGAGAATTCACCGCCATTGATAACTGTTCTGCAACTTCGATGATGAATTGCTTTGAAATTTCAAATCAGAGAGAGTTTATGAAGGCGACGAATGAGGAGCAGAGTTTGTTTAATGCAGAGGAGACTTGCAATTTCTGTTCTGTGGATCAAGCTCCATCTCTCCACTGG

Protein sequence

MKRFGHSESLDSFISIFSPKEQPSSTTAGGYSKEFQAMLDSLEEEENSEDGGGGPAPERKRRLRLDQVKALERHFEVENKLEPDRKLKIAAELELEPRQVTIWFQNRRARWKTKQLERDYGVLKVNYDALKLDYDVLEKQNASLASKLRELREKVSRESEEMKIQREFTAIDNCSATSMMNCFEISNQREFMKATNEEQSLFNAEETCNFCSVDQAPSLHW

Homology

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BLAST of MS008376 vs. NCBI nr
Match: XP_022156620.1 (homeobox-leucine zipper protein ATHB-16-like [Momordica charantia] >XP_022156672.1 homeobox-leucine zipper protein ATHB-16-like [Momordica charantia])

HSP 1 Score: 427.6 bits (1098), Expect = 6.7e-116
Identity = 220/222 (99.10%), Postives = 220/222 (99.10%), Query Frame = 0


Query: 1   MKRFGHSESLDSFISIFSPKEQPSSTTAGGYSKEFQAMLDSLEEEENSED-GGGGPAPER 60
           MKRFGHSESLDSFISIFSPKEQPSSTTAGGYSKEFQAMLDSLEEEENSED GGGGPAPER
Sbjct: 1   MKRFGHSESLDSFISIFSPKEQPSSTTAGGYSKEFQAMLDSLEEEENSEDGGGGGPAPER 60

Query: 61  KRRLRLDQVKALERHFEVENKLEPDRKLKIAAELELEPRQVTIWFQNRRARWKTKQLERD 120
           KRRLRLDQVKALERHFEVENKLEPDRKLKIAAELELEPRQVTIWFQNRRARWKTKQLERD
Sbjct: 61  KRRLRLDQVKALERHFEVENKLEPDRKLKIAAELELEPRQVTIWFQNRRARWKTKQLERD 120

Query: 121 YGVLKVNYDALKLDYDVLEKQNASLASKLRELREKVSRESEEMKIQREFTAIDNCSATSM 180
           YGVLKVNYDALKLDYDVLEKQN SLASKLRELREKVSRESEEMKIQREFTAIDNCSATSM
Sbjct: 121 YGVLKVNYDALKLDYDVLEKQNTSLASKLRELREKVSRESEEMKIQREFTAIDNCSATSM 180

Query: 181 MNCFEISNQREFMKATNEEQSLFNAEETCNFCSVDQAPSLHW 222
           MNCFEISNQREFMKATNEEQSLFNAEETCNFCSVDQAPSLHW
Sbjct: 181 MNCFEISNQREFMKATNEEQSLFNAEETCNFCSVDQAPSLHW 222

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BLAST of MS008376 vs. NCBI nr
Match: XP_022940501.1 (homeobox-leucine zipper protein ATHB-5-like [Cucurbita moschata])

HSP 1 Score: 344.4 bits (882), Expect = 7.5e-91
Identity = 184/236 (77.97%), Postives = 199/236 (84.32%), Query Frame = 0


Query: 1   MKRFGHSESLDSFISIFSPKEQPSSTTAGGYSKEFQAMLDSLEEEENSEDGGG--GPAPE 60
           M RF  SESLDSF SIF+PKEQPSSTT GGYSKEFQAMLDSLEEE+NSEDGGG  G APE
Sbjct: 2   MMRFDRSESLDSFSSIFTPKEQPSSTTIGGYSKEFQAMLDSLEEEDNSEDGGGSSGSAPE 61

Query: 61  RKRRLRLDQVKALERHFEVENKLEPDRKLKIAAELELEPRQVTIWFQNRRARWKTKQLER 120
           RKRRL+ DQVKALERHFEVENKLEP+RK+KIA ELELEPRQVTIWFQNRRARWKTKQLER
Sbjct: 62  RKRRLKPDQVKALERHFEVENKLEPERKMKIATELELEPRQVTIWFQNRRARWKTKQLER 121

Query: 121 DYGVLKVNYDALKLDYDVLEKQNASLASKLRELREKVSRESEEMKIQREF--------TA 180
           DYGVLK NYDALKLDYDVLEK+NASLASK+RELREKVSRE  +MKIQRE         + 
Sbjct: 122 DYGVLKANYDALKLDYDVLEKENASLASKVRELREKVSREGTKMKIQRELKDEKNSFVST 181

Query: 181 IDNCSATSMMNCFEIS-----NQREFMKATNEEQSLFNAEETCNFCSVDQAPSLHW 222
            +N S +SM+N FE+S     NQ +F KA NE+QSLFN EE CNFCSVDQAPSLHW
Sbjct: 182 NNNSSLSSMLNSFELSRKVYENQTQFTKAMNEDQSLFNTEEPCNFCSVDQAPSLHW 237

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BLAST of MS008376 vs. NCBI nr
Match: KAG6608262.1 (Homeobox-leucine zipper protein ATHB-5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 344.4 bits (882), Expect = 7.5e-91
Identity = 184/236 (77.97%), Postives = 199/236 (84.32%), Query Frame = 0


Query: 1   MKRFGHSESLDSFISIFSPKEQPSSTTAGGYSKEFQAMLDSLEEEENSEDGGG--GPAPE 60
           M RF  SESLDSF SIF+PKEQPSSTT GGYSKEFQAMLDSLEEE+NSEDGGG  G APE
Sbjct: 2   MMRFDRSESLDSFSSIFAPKEQPSSTTIGGYSKEFQAMLDSLEEEDNSEDGGGSSGSAPE 61

Query: 61  RKRRLRLDQVKALERHFEVENKLEPDRKLKIAAELELEPRQVTIWFQNRRARWKTKQLER 120
           RKRRL+ DQVKALERHFEVENKLEP+RK+KIA ELELEPRQVTIWFQNRRARWKTKQLER
Sbjct: 62  RKRRLKPDQVKALERHFEVENKLEPERKMKIATELELEPRQVTIWFQNRRARWKTKQLER 121

Query: 121 DYGVLKVNYDALKLDYDVLEKQNASLASKLRELREKVSRESEEMKIQREF--------TA 180
           DYGVLK NYDALKLDYDVLEK+NASLASK+RELREKVSRE  +MKIQRE         + 
Sbjct: 122 DYGVLKANYDALKLDYDVLEKENASLASKVRELREKVSREGTKMKIQRELKDEKNSFVST 181

Query: 181 IDNCSATSMMNCFEIS-----NQREFMKATNEEQSLFNAEETCNFCSVDQAPSLHW 222
            +N S +SM+N FE+S     NQ +F KA NE+QSLFN EE CNFCSVDQAPSLHW
Sbjct: 182 NNNSSLSSMLNSFELSRKVYENQTQFTKAMNEDQSLFNTEEPCNFCSVDQAPSLHW 237

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BLAST of MS008376 vs. NCBI nr
Match: XP_023524359.1 (homeobox-leucine zipper protein ATHB-5-like [Cucurbita pepo subsp. pepo] >XP_023524360.1 homeobox-leucine zipper protein ATHB-5-like [Cucurbita pepo subsp. pepo] >XP_023524361.1 homeobox-leucine zipper protein ATHB-5-like [Cucurbita pepo subsp. pepo] >XP_023524362.1 homeobox-leucine zipper protein ATHB-5-like [Cucurbita pepo subsp. pepo] >XP_023524363.1 homeobox-leucine zipper protein ATHB-5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 344.0 bits (881), Expect = 9.8e-91
Identity = 184/236 (77.97%), Postives = 198/236 (83.90%), Query Frame = 0


Query: 1   MKRFGHSESLDSFISIFSPKEQPSSTTAGGYSKEFQAMLDSLEEEENSEDGGG--GPAPE 60
           M RF  SESLDSF SIF+PKEQPSSTT GGYSKEFQAMLDSLEEE+NSEDGGG  G APE
Sbjct: 2   MMRFDRSESLDSFSSIFTPKEQPSSTTIGGYSKEFQAMLDSLEEEDNSEDGGGSSGSAPE 61

Query: 61  RKRRLRLDQVKALERHFEVENKLEPDRKLKIAAELELEPRQVTIWFQNRRARWKTKQLER 120
           RKRRL+ DQVKALERHFEVENKLEP+RK+KIA ELELEPRQVTIWFQNRRARWKTKQLER
Sbjct: 62  RKRRLKPDQVKALERHFEVENKLEPERKMKIATELELEPRQVTIWFQNRRARWKTKQLER 121

Query: 121 DYGVLKVNYDALKLDYDVLEKQNASLASKLRELREKVSRESEEMKIQREF--------TA 180
           DYGVLK NYDALKLDYDVLEK+NASLASK+RELREKVSRE  +MKIQRE         + 
Sbjct: 122 DYGVLKANYDALKLDYDVLEKENASLASKVRELREKVSREGTKMKIQRELKDEKNSFVST 181

Query: 181 IDNCSATSMMNCFEIS-----NQREFMKATNEEQSLFNAEETCNFCSVDQAPSLHW 222
            +N S  SM+N FE+S     NQ +F KA NE+QSLFN EE CNFCSVDQAPSLHW
Sbjct: 182 NNNSSLNSMLNSFELSRKVYENQTQFTKAMNEDQSLFNTEEPCNFCSVDQAPSLHW 237

[Close]

BLAST of MS008376 vs. NCBI nr
Match: XP_022982007.1 (homeobox-leucine zipper protein ATHB-5-like [Cucurbita maxima])

HSP 1 Score: 342.0 bits (876), Expect = 3.7e-90
Identity = 183/236 (77.54%), Postives = 197/236 (83.47%), Query Frame = 0


Query: 1   MKRFGHSESLDSFISIFSPKEQPSSTTAGGYSKEFQAMLDSLEEEENSEDGGG--GPAPE 60
           M RF   ESLDSF SIF+PKEQPSSTT GGYSKEFQAMLDSLEEE+NSEDGGG  G APE
Sbjct: 2   MMRFDRPESLDSFSSIFTPKEQPSSTTIGGYSKEFQAMLDSLEEEDNSEDGGGSSGSAPE 61

Query: 61  RKRRLRLDQVKALERHFEVENKLEPDRKLKIAAELELEPRQVTIWFQNRRARWKTKQLER 120
           RKRRL+ DQVKALERHFEVENKLEP+RK+KIA ELELEPRQVTIWFQNRRARWKTKQLER
Sbjct: 62  RKRRLKPDQVKALERHFEVENKLEPERKMKIATELELEPRQVTIWFQNRRARWKTKQLER 121

Query: 121 DYGVLKVNYDALKLDYDVLEKQNASLASKLRELREKVSRESEEMKIQREF--------TA 180
           DYGVLK NYDALKLDYDVLEK+NASLASK+RELREKVSRE  +MKIQRE         + 
Sbjct: 122 DYGVLKANYDALKLDYDVLEKENASLASKVRELREKVSREGTKMKIQRELKDEKNSFVST 181

Query: 181 IDNCSATSMMNCFEIS-----NQREFMKATNEEQSLFNAEETCNFCSVDQAPSLHW 222
            +N S  SM+N FE+S     NQ +F KA NE+QSLFN EE CNFCSVDQAPSLHW
Sbjct: 182 NNNSSLNSMLNSFELSRKVYENQTQFTKAMNEDQSLFNTEEPCNFCSVDQAPSLHW 237

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BLAST of MS008376 vs. ExPASy Swiss-Prot
Match: P46667 (Homeobox-leucine zipper protein ATHB-5 OS=Arabidopsis thaliana OX=3702 GN=ATHB-5 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.6e-35
Identity = 88/171 (51.46%), Postives = 119/171 (69.59%), Query Frame = 0


Query: 1   MKRF-GHSESLDSFI----SIFSPKEQPSSTTAG---GYSKEFQAMLDSLEEEENSEDGG 60
           MKR  G S+SL  F+    S    +  P  TT G     + ++  M D+LE++ + ED G
Sbjct: 1   MKRSRGSSDSLSGFLPIRHSTTDKQISPRPTTTGFLYSGAGDYSQMFDALEDDGSLEDLG 60

Query: 61  G-----GPAPERKRRLRLDQVKALERHFEVENKLEPDRKLKIAAELELEPRQVTIWFQNR 120
           G       A E+KRRL ++QVKALE++FE++NKLEP+RK+K+A EL L+PRQV IWFQNR
Sbjct: 61  GVGHASSTAAEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNR 120

Query: 121 RARWKTKQLERDYGVLKVNYDALKLDYDVLEKQNASLASKLRELREKVSRE 159
           RARWKTKQLERDYGVLK N+DALK + D L++ N SL  +++EL+ K++ E
Sbjct: 121 RARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKAKLNVE 171

[Close]

BLAST of MS008376 vs. ExPASy Swiss-Prot
Match: P46668 (Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana OX=3702 GN=ATHB-6 PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 6.1e-35
Identity = 91/216 (42.13%), Postives = 135/216 (62.50%), Query Frame = 0


Query: 1   MKRFGHSESLDSFISI--FSPKEQPSSTTAGGYSKEFQAMLDSLEEEENS--EDGGGGPA 60
           MKR   S+S+   IS+   +  ++ S    GG  +EFQ+ML+  EEEE +  E+ G    
Sbjct: 2   MKRLSSSDSVGGLISLCPTTSTDEQSPRRYGG--REFQSMLEGYEEEEEAIVEERGHVGL 61

Query: 61  PERKRRLRLDQVKALERHFEVENKLEPDRKLKIAAELELEPRQVTIWFQNRRARWKTKQL 120
            E+KRRL ++QVKALE++FE+ENKLEP+RK+K+A EL L+PRQV +WFQNRRARWKTKQL
Sbjct: 62  SEKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQL 121

Query: 121 ERDYGVLKVNYDALKLDYDVLEKQNASLASKLRELREKVSRESEEMKIQREFTAIDNCSA 180
           E+DYGVLK  YD+L+ ++D L + N SL  ++ +L+ K++    E + +    A+   S 
Sbjct: 122 EKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLNGGGGEEEEEENNAAVTTESD 181

Query: 181 TSMMNCFEISNQREFMKATNEEQSLFNAEETCNFCS 213
            S+    E+S   +  +A +         +  N+ S
Sbjct: 182 ISVKE-EEVSLPEKITEAPSSPPQFLEHSDGLNYRS 214

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BLAST of MS008376 vs. ExPASy Swiss-Prot
Match: Q940J1 (Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana OX=3702 GN=ATHB-16 PE=2 SV=2)

HSP 1 Score: 146.7 bits (369), Expect = 3.0e-34
Identity = 80/165 (48.48%), Postives = 113/165 (68.48%), Query Frame = 0


Query: 1   MKRFGHSESLDSFISIFSPKEQPSSTTAGGYSKEFQAMLDSLEE-----EENSEDGGGGP 60
           MKR   S+S+   IS  + ++ P      GY   +Q+ML+  +E     EE S +     
Sbjct: 1   MKRLSSSDSMCGLISTSTDEQSPR-----GYGSNYQSMLEGYDEDATLIEEYSGNHHHMG 60

Query: 61  APERKRRLRLDQVKALERHFEVENKLEPDRKLKIAAELELEPRQVTIWFQNRRARWKTKQ 120
             E+KRRL++DQVKALE++FE+ENKLEP+RK K+A EL L+PRQV +WFQNRRARWKTKQ
Sbjct: 61  LSEKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQ 120

Query: 121 LERDYGVLKVNYDALKLDYDVLEKQNASLASKLRELREKVSRESE 161
           LE+DYGVLK  YD+L+ ++D L + N SL  ++ +++ KV+ E +
Sbjct: 121 LEKDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKAKVNGEED 160

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BLAST of MS008376 vs. ExPASy Swiss-Prot
Match: Q10QP3 (Homeobox-leucine zipper protein HOX13 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX13 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 9.1e-31
Identity = 71/127 (55.91%), Postives = 93/127 (73.23%), Query Frame = 0


Query: 39  LDSLEEEENSEDGGGG-----PAP-----ERKRRLRLDQVKALERHFEVENKLEPDRKLK 98
           +D  EEEE  ED  GG     P+P     E+KRRL L+QV+ALER F+ +NKL+PDRK +
Sbjct: 42  VDEEEEEEVDEDMAGGHAAQSPSPSCGLGEKKRRLALEQVRALERSFDTDNKLDPDRKAR 101

Query: 99  IAAELELEPRQVTIWFQNRRARWKTKQLERDYGVLKVNYDALKLDYDVLEKQNASLASKL 156
           IA +L L+PRQV +WFQNRRARWKTKQLERD+  L+  +DAL+ D D L +   +LA+++
Sbjct: 102 IARDLGLQPRQVAVWFQNRRARWKTKQLERDFAALRARHDALRADCDALRRDKDALAAEI 161

[Close]

BLAST of MS008376 vs. ExPASy Swiss-Prot
Match: Q9XH37 (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica OX=39946 GN=HOX4 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.4e-30
Identity = 73/152 (48.03%), Postives = 100/152 (65.79%), Query Frame = 0


Query: 21  EQPSSTTAGGYSKEFQAMLDSLE--------------EEENSEDGGGGPAPERKRRLRLD 80
           ++P     GG S     M +S +              EEE    GGGG   E+KRRL ++
Sbjct: 2   KRPGGAGGGGGSPSLVTMANSSDDGYGGVGMEAEGDVEEEMMACGGGG---EKKRRLSVE 61

Query: 81  QVKALERHFEVENKLEPDRKLKIAAELELEPRQVTIWFQNRRARWKTKQLERDYGVLKVN 140
           QV+ALER FEVENKLEP+RK ++A +L L+PRQV +WFQNRRARWKTKQLERDY  L+ +
Sbjct: 62  QVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHS 121

Query: 141 YDALKLDYDVLEKQNASLASKLRELREKVSRE 159
           YD+L+LD+D L +   +L ++++EL+ K+  E
Sbjct: 122 YDSLRLDHDALRRDKDALLAEIKELKAKLGDE 150

[Close]

BLAST of MS008376 vs. ExPASy TrEMBL
Match: A0A6J1DSK6 (homeobox-leucine zipper protein ATHB-16-like OS=Momordica charantia OX=3673 GN=LOC111023462 PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 3.3e-116
Identity = 220/222 (99.10%), Postives = 220/222 (99.10%), Query Frame = 0


Query: 1   MKRFGHSESLDSFISIFSPKEQPSSTTAGGYSKEFQAMLDSLEEEENSED-GGGGPAPER 60
           MKRFGHSESLDSFISIFSPKEQPSSTTAGGYSKEFQAMLDSLEEEENSED GGGGPAPER
Sbjct: 1   MKRFGHSESLDSFISIFSPKEQPSSTTAGGYSKEFQAMLDSLEEEENSEDGGGGGPAPER 60

Query: 61  KRRLRLDQVKALERHFEVENKLEPDRKLKIAAELELEPRQVTIWFQNRRARWKTKQLERD 120
           KRRLRLDQVKALERHFEVENKLEPDRKLKIAAELELEPRQVTIWFQNRRARWKTKQLERD
Sbjct: 61  KRRLRLDQVKALERHFEVENKLEPDRKLKIAAELELEPRQVTIWFQNRRARWKTKQLERD 120

Query: 121 YGVLKVNYDALKLDYDVLEKQNASLASKLRELREKVSRESEEMKIQREFTAIDNCSATSM 180
           YGVLKVNYDALKLDYDVLEKQN SLASKLRELREKVSRESEEMKIQREFTAIDNCSATSM
Sbjct: 121 YGVLKVNYDALKLDYDVLEKQNTSLASKLRELREKVSRESEEMKIQREFTAIDNCSATSM 180

Query: 181 MNCFEISNQREFMKATNEEQSLFNAEETCNFCSVDQAPSLHW 222
           MNCFEISNQREFMKATNEEQSLFNAEETCNFCSVDQAPSLHW
Sbjct: 181 MNCFEISNQREFMKATNEEQSLFNAEETCNFCSVDQAPSLHW 222

[Close]

BLAST of MS008376 vs. ExPASy TrEMBL
Match: A0A6J1FIN2 (homeobox-leucine zipper protein ATHB-5-like OS=Cucurbita moschata OX=3662 GN=LOC111446073 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.6e-91
Identity = 184/236 (77.97%), Postives = 199/236 (84.32%), Query Frame = 0


Query: 1   MKRFGHSESLDSFISIFSPKEQPSSTTAGGYSKEFQAMLDSLEEEENSEDGGG--GPAPE 60
           M RF  SESLDSF SIF+PKEQPSSTT GGYSKEFQAMLDSLEEE+NSEDGGG  G APE
Sbjct: 2   MMRFDRSESLDSFSSIFTPKEQPSSTTIGGYSKEFQAMLDSLEEEDNSEDGGGSSGSAPE 61

Query: 61  RKRRLRLDQVKALERHFEVENKLEPDRKLKIAAELELEPRQVTIWFQNRRARWKTKQLER 120
           RKRRL+ DQVKALERHFEVENKLEP+RK+KIA ELELEPRQVTIWFQNRRARWKTKQLER
Sbjct: 62  RKRRLKPDQVKALERHFEVENKLEPERKMKIATELELEPRQVTIWFQNRRARWKTKQLER 121

Query: 121 DYGVLKVNYDALKLDYDVLEKQNASLASKLRELREKVSRESEEMKIQREF--------TA 180
           DYGVLK NYDALKLDYDVLEK+NASLASK+RELREKVSRE  +MKIQRE         + 
Sbjct: 122 DYGVLKANYDALKLDYDVLEKENASLASKVRELREKVSREGTKMKIQRELKDEKNSFVST 181

Query: 181 IDNCSATSMMNCFEIS-----NQREFMKATNEEQSLFNAEETCNFCSVDQAPSLHW 222
            +N S +SM+N FE+S     NQ +F KA NE+QSLFN EE CNFCSVDQAPSLHW
Sbjct: 182 NNNSSLSSMLNSFELSRKVYENQTQFTKAMNEDQSLFNTEEPCNFCSVDQAPSLHW 237

[Close]

BLAST of MS008376 vs. ExPASy TrEMBL
Match: A0A6J1IVI4 (homeobox-leucine zipper protein ATHB-5-like OS=Cucurbita maxima OX=3661 GN=LOC111480988 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.8e-90
Identity = 183/236 (77.54%), Postives = 197/236 (83.47%), Query Frame = 0


Query: 1   MKRFGHSESLDSFISIFSPKEQPSSTTAGGYSKEFQAMLDSLEEEENSEDGGG--GPAPE 60
           M RF   ESLDSF SIF+PKEQPSSTT GGYSKEFQAMLDSLEEE+NSEDGGG  G APE
Sbjct: 2   MMRFDRPESLDSFSSIFTPKEQPSSTTIGGYSKEFQAMLDSLEEEDNSEDGGGSSGSAPE 61

Query: 61  RKRRLRLDQVKALERHFEVENKLEPDRKLKIAAELELEPRQVTIWFQNRRARWKTKQLER 120
           RKRRL+ DQVKALERHFEVENKLEP+RK+KIA ELELEPRQVTIWFQNRRARWKTKQLER
Sbjct: 62  RKRRLKPDQVKALERHFEVENKLEPERKMKIATELELEPRQVTIWFQNRRARWKTKQLER 121

Query: 121 DYGVLKVNYDALKLDYDVLEKQNASLASKLRELREKVSRESEEMKIQREF--------TA 180
           DYGVLK NYDALKLDYDVLEK+NASLASK+RELREKVSRE  +MKIQRE         + 
Sbjct: 122 DYGVLKANYDALKLDYDVLEKENASLASKVRELREKVSREGTKMKIQRELKDEKNSFVST 181

Query: 181 IDNCSATSMMNCFEIS-----NQREFMKATNEEQSLFNAEETCNFCSVDQAPSLHW 222
            +N S  SM+N FE+S     NQ +F KA NE+QSLFN EE CNFCSVDQAPSLHW
Sbjct: 182 NNNSSLNSMLNSFELSRKVYENQTQFTKAMNEDQSLFNTEEPCNFCSVDQAPSLHW 237

[Close]

BLAST of MS008376 vs. ExPASy TrEMBL
Match: A0A5A7TAR1 (Homeobox-leucine zipper protein ATHB-6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G002330 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 9.3e-79
Identity = 165/224 (73.66%), Postives = 187/224 (83.48%), Query Frame = 0


Query: 1   MKRFGHSESLDSFISIFSPK-EQPSSTTAGGYSKEFQAMLDSLEEEENSEDGG--GGPAP 60
           MKRF HS+SLDSFIS FSPK +QP+S   GGYSKEFQAMLDSLEEE+NSEDGG  GG AP
Sbjct: 1   MKRFSHSDSLDSFISFFSPKDQQPNSKAIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60

Query: 61  ERKRRLRLDQVKALERHFEVENKLEPDRKLKIAAELELEPRQVTIWFQNRRARWKTKQLE 120
           ERKRRL+LDQVK LERHFEVENKLEPDRK+KIAAELELEPRQVTIWFQNRRARWKTKQLE
Sbjct: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120

Query: 121 RDYGVLKVNYDALKLDYDVLEKQNASLASKLRELREKVSRESEEMKIQREFTAIDNCSAT 180
           +DYGVLK+NYDALKLDYDVLEK+NASLASK++ELREKV+R  ++  ++R+     N S  
Sbjct: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRAMKKGSMERDSNRDGNNSYI 180

Query: 181 SMMNCFEISNQREFMKATNEEQSLFNAEETCNFCSVDQAPSLHW 222
           SM+     +NQ +F KA NE+QSL       NFCSVDQAPSLH+
Sbjct: 181 SMLK--NNNNQIQFTKAMNEDQSL------VNFCSVDQAPSLHY 216

[Close]

BLAST of MS008376 vs. ExPASy TrEMBL
Match: A0A5D3E5X1 (Homeobox-leucine zipper protein ATHB-6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006000 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 4.6e-78
Identity = 166/225 (73.78%), Postives = 189/225 (84.00%), Query Frame = 0


Query: 1   MKRFGHSESLDSFISIFSPK-EQPSSTTAGGYSKEFQAMLDSLEEEENSEDGG--GGPAP 60
           MKRF HS+SLDSFIS FSPK +QP+S   GGYSKEFQAMLDSLEEE+NSEDGG  GG AP
Sbjct: 1   MKRFSHSDSLDSFISFFSPKDQQPNSKAIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60

Query: 61  ERKRRLRLDQVKALERHFEVENKLEPDRKLKIAAELELEPRQVTIWFQNRRARWKTKQLE 120
           ERKRRL+LDQVK LERHFEVENKLEPDRK+KIAAELELEPRQVTIWFQNRRARWKTKQLE
Sbjct: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120

Query: 121 RDYGVLKVNYDALKLDYDVLEKQNASLASKLRELREKVSRESEEMKIQREFTAID-NCSA 180
           +DYGVLK+NYDALKLDYDVLEK+NASLASK++ELREKV+R  ++  ++R+ +  D N S 
Sbjct: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRAMKKGSMERDDSNRDGNNSY 180

Query: 181 TSMMNCFEISNQREFMKATNEEQSLFNAEETCNFCSVDQAPSLHW 222
            SM+     +NQ +F KA NE+QSL       NFCSVDQAPSLH+
Sbjct: 181 ISMLK--NNNNQIQFTKAMNEDQSL------VNFCSVDQAPSLHY 217

[Close]

BLAST of MS008376 vs. TAIR 10
Match: AT5G65310.1 (homeobox protein 5 )

HSP 1 Score: 151.0 bits (380), Expect = 1.1e-36
Identity = 88/171 (51.46%), Postives = 119/171 (69.59%), Query Frame = 0


Query: 1   MKRF-GHSESLDSFI----SIFSPKEQPSSTTAG---GYSKEFQAMLDSLEEEENSEDGG 60
           MKR  G S+SL  F+    S    +  P  TT G     + ++  M D+LE++ + ED G
Sbjct: 1   MKRSRGSSDSLSGFLPIRHSTTDKQISPRPTTTGFLYSGAGDYSQMFDALEDDGSLEDLG 60

Query: 61  G-----GPAPERKRRLRLDQVKALERHFEVENKLEPDRKLKIAAELELEPRQVTIWFQNR 120
           G       A E+KRRL ++QVKALE++FE++NKLEP+RK+K+A EL L+PRQV IWFQNR
Sbjct: 61  GVGHASSTAAEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNR 120

Query: 121 RARWKTKQLERDYGVLKVNYDALKLDYDVLEKQNASLASKLRELREKVSRE 159
           RARWKTKQLERDYGVLK N+DALK + D L++ N SL  +++EL+ K++ E
Sbjct: 121 RARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKAKLNVE 171

[Close]

BLAST of MS008376 vs. TAIR 10
Match: AT2G22430.1 (homeobox protein 6 )

HSP 1 Score: 149.1 bits (375), Expect = 4.3e-36
Identity = 91/216 (42.13%), Postives = 135/216 (62.50%), Query Frame = 0


Query: 1   MKRFGHSESLDSFISI--FSPKEQPSSTTAGGYSKEFQAMLDSLEEEENS--EDGGGGPA 60
           MKR   S+S+   IS+   +  ++ S    GG  +EFQ+ML+  EEEE +  E+ G    
Sbjct: 2   MKRLSSSDSVGGLISLCPTTSTDEQSPRRYGG--REFQSMLEGYEEEEEAIVEERGHVGL 61

Query: 61  PERKRRLRLDQVKALERHFEVENKLEPDRKLKIAAELELEPRQVTIWFQNRRARWKTKQL 120
            E+KRRL ++QVKALE++FE+ENKLEP+RK+K+A EL L+PRQV +WFQNRRARWKTKQL
Sbjct: 62  SEKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQL 121

Query: 121 ERDYGVLKVNYDALKLDYDVLEKQNASLASKLRELREKVSRESEEMKIQREFTAIDNCSA 180
           E+DYGVLK  YD+L+ ++D L + N SL  ++ +L+ K++    E + +    A+   S 
Sbjct: 122 EKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLNGGGGEEEEEENNAAVTTESD 181

Query: 181 TSMMNCFEISNQREFMKATNEEQSLFNAEETCNFCS 213
            S+    E+S   +  +A +         +  N+ S
Sbjct: 182 ISVKE-EEVSLPEKITEAPSSPPQFLEHSDGLNYRS 214

[Close]

BLAST of MS008376 vs. TAIR 10
Match: AT5G65310.2 (homeobox protein 5 )

HSP 1 Score: 147.1 bits (370), Expect = 1.6e-35
Identity = 79/144 (54.86%), Postives = 107/144 (74.31%), Query Frame = 0


Query: 23  PSSTTAG---GYSKEFQAMLDSLEEEENSEDGGG-----GPAPERKRRLRLDQVKALERH 82
           P  TT G     + ++  M D+LE++ + ED GG       A E+KRRL ++QVKALE++
Sbjct: 10  PRPTTTGFLYSGAGDYSQMFDALEDDGSLEDLGGVGHASSTAAEKKRRLGVEQVKALEKN 69

Query: 83  FEVENKLEPDRKLKIAAELELEPRQVTIWFQNRRARWKTKQLERDYGVLKVNYDALKLDY 142
           FE++NKLEP+RK+K+A EL L+PRQV IWFQNRRARWKTKQLERDYGVLK N+DALK + 
Sbjct: 70  FEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSNFDALKRNR 129

Query: 143 DVLEKQNASLASKLRELREKVSRE 159
           D L++ N SL  +++EL+ K++ E
Sbjct: 130 DSLQRDNDSLLGQIKELKAKLNVE 153

[Close]

BLAST of MS008376 vs. TAIR 10
Match: AT4G40060.1 (homeobox protein 16 )

HSP 1 Score: 146.7 bits (369), Expect = 2.1e-35
Identity = 80/165 (48.48%), Postives = 113/165 (68.48%), Query Frame = 0


Query: 1   MKRFGHSESLDSFISIFSPKEQPSSTTAGGYSKEFQAMLDSLEE-----EENSEDGGGGP 60
           MKR   S+S+   IS  + ++ P      GY   +Q+ML+  +E     EE S +     
Sbjct: 1   MKRLSSSDSMCGLISTSTDEQSPR-----GYGSNYQSMLEGYDEDATLIEEYSGNHHHMG 60

Query: 61  APERKRRLRLDQVKALERHFEVENKLEPDRKLKIAAELELEPRQVTIWFQNRRARWKTKQ 120
             E+KRRL++DQVKALE++FE+ENKLEP+RK K+A EL L+PRQV +WFQNRRARWKTKQ
Sbjct: 61  LSEKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQ 120

Query: 121 LERDYGVLKVNYDALKLDYDVLEKQNASLASKLRELREKVSRESE 161
           LE+DYGVLK  YD+L+ ++D L + N SL  ++ +++ KV+ E +
Sbjct: 121 LEKDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKAKVNGEED 160

[Close]

BLAST of MS008376 vs. TAIR 10
Match: AT5G15150.1 (homeobox 3 )

HSP 1 Score: 122.5 bits (306), Expect = 4.3e-28
Identity = 74/148 (50.00%), Postives = 98/148 (66.22%), Query Frame = 0


Query: 22  QPSSTTAGGYSKEFQAMLDSLEEEEN-SEDGGGGPAPERKRRLRLDQVKALERHFEVENK 81
           Q S TT    + +     D + EE+N S+DG      E+K+RL L+QV+ALE+ FE+ NK
Sbjct: 82  QKSPTTTNNMNDQ-----DQVGEEDNLSDDGSHMMLGEKKKRLNLEQVRALEKSFELGNK 141

Query: 82  LEPDRKLKIAAELELEPRQVTIWFQNRRARWKTKQLERDYGVLKVNYDALKLDYDVLEKQ 141
           LEP+RK+++A  L L+PRQ+ IWFQNRRARWKTKQLERDY  LK  +D LK D D L   
Sbjct: 142 LEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLERDYDSLKKQFDVLKSDNDSLLAH 201

Query: 142 NASLASKLRELREKVSRESEEMKIQREF 169
           N  L ++L  L++   +ES   KI+REF
Sbjct: 202 NKKLHAELVALKKHDRKES--AKIKREF 222

The following BLAST results are available for this feature:

BLAST of MS008376 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156620.1	6.7e-116	99.10	homeobox-leucine zipper protein ATHB-16-like [Momordica charantia] >XP_022156672...	[more]
XP_022940501.1	7.5e-91	77.97	homeobox-leucine zipper protein ATHB-5-like [Cucurbita moschata]	[more]
KAG6608262.1	7.5e-91	77.97	Homeobox-leucine zipper protein ATHB-5, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_023524359.1	9.8e-91	77.97	homeobox-leucine zipper protein ATHB-5-like [Cucurbita pepo subsp. pepo] >XP_023...	[more]
XP_022982007.1	3.7e-90	77.54	homeobox-leucine zipper protein ATHB-5-like [Cucurbita maxima]	[more]

BLAST of MS008376 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46667	1.6e-35	51.46	Homeobox-leucine zipper protein ATHB-5 OS=Arabidopsis thaliana OX=3702 GN=ATHB-5...	[more]
P46668	6.1e-35	42.13	Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana OX=3702 GN=ATHB-6...	[more]
Q940J1	3.0e-34	48.48	Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
Q10QP3	9.1e-31	55.91	Homeobox-leucine zipper protein HOX13 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q9XH37	3.4e-30	48.03	Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica OX=39946 GN=H...	[more]

BLAST of MS008376 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DSK6	3.3e-116	99.10	homeobox-leucine zipper protein ATHB-16-like OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1FIN2	3.6e-91	77.97	homeobox-leucine zipper protein ATHB-5-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1IVI4	1.8e-90	77.54	homeobox-leucine zipper protein ATHB-5-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A5A7TAR1	9.3e-79	73.66	Homeobox-leucine zipper protein ATHB-6-like OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5D3E5X1	4.6e-78	73.78	Homeobox-leucine zipper protein ATHB-6-like OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of MS008376 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65310.1	1.1e-36	51.46	homeobox protein 5	[more]
AT2G22430.1	4.3e-36	42.13	homeobox protein 6	[more]
AT5G65310.2	1.6e-35	54.86	homeobox protein 5	[more]
AT4G40060.1	2.1e-35	48.48	homeobox protein 16	[more]
AT5G15150.1	4.3e-28	50.00	homeobox 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 127..165
None	No IPR available	GENE3D	1.10.10.60		coord: 30..115 e-value: 1.6E-17 score: 65.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..61
None	No IPR available	PANTHER	PTHR24326	HOMEOBOX-LEUCINE ZIPPER PROTEIN	coord: 6..197
None	No IPR available	PANTHER	PTHR24326:SF535	HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-6	coord: 6..197
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 57..118 e-value: 2.0E-15 score: 67.3
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 61..112 e-value: 6.1E-15 score: 54.8
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 54..114 score: 16.195724
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 59..115 e-value: 1.25517E-13 score: 61.4904
IPR003106	Leucine zipper, homeobox-associated	PFAM	PF02183	HALZ	coord: 114..155 e-value: 6.8E-16 score: 58.2
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 89..112
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 53..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS008376.1	MS008376.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0043565	sequence-specific DNA binding