MS008306 (gene) Bitter gourd (TR) v1

Overview


Name	MS008306
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Auxin-responsive protein
Location	scaffold4: 324135 .. 326179 (+)
RNA-Seq Expression	MS008306
Synteny	MS008306

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCAGGTGTCCTGAGCTTCTTGACCTGATCTCTAGAGACAGGGAGTGGGACTTGATTAGGAATGGTGCTGAAAGTTCTGTGAGTGAGAACAATAAGCTTGAACTCAGACTTGGACTTCCAGGAGAAGGGGGGCTTGTAGAAGGAAGCAGCTGCTTGAATAGTAACCACGAAAGTGGTGAATTGCCTCTCTCTTCTGCTGAGCTCTTTCCTTCTTGTTTGAACATTAGAAGCAACAAAAGGGCGCTCTATGAAAAAGCTGAAGGAATGGCAGAGGGTGGAATTTGGTTGAATAGAAATGATGAATTCCAACCCCACAAGTTGATTTTCTCTGAGAAAACAGCTGAGAAGGTGTCTCCTCCTACTCCATGCCCAAGTGCTTCCTTATCATCTTCAGCTTTTCAGAGGGAGGCCCAGAAGCTTTCTCTACAATCAAAATCTTCATATTTACAACACTTACTGATGCCTCAGAAATTGGACAAGGTGTCAGAGGAGGCATCAAAGTCAGGCTGTTTGAAAACAGCAGAGTTCCCATACTTAGATGGGAAATCATATCCCAACACTGTTTCAGTTCCTGCAAATTCATCTGAGCCACAACACTCTGACAAAAGGTGAGTCACCTTATCTTCTTTAATACCCTATTTTCCAATAATGCATATCAAATTGTACGTTTTAAGCGGTGGAATATCTTGTCACCAACACCGTCGCCAAAACTTTGCACCTCCAGACCATTATTACATTTTTCATCAGCCTGAATAATCTACCAACTTTCTCAACAACCTTTTTGTATAAGTTGAAATGAAACTTAGACTTATTTTTCTGGTTTAAACTGCTTTTTGAAAATTTGGAAAGTTGAAGTCCCTTTCAATGAAGTACGTTTTGTATGGATAATATTTTAAGGAACTAAAAAAGGTTCTGATACAAAATTCTGCACTGCAAGTTGCAACTGACTGTTATCATGAAGCTCAGATGCTTGTTGCAGGAGAGTCTAAAAGTGACCTAGTTGATATACCAATTAAAATTTTGATATTATTGGCCTATAATTAAACCCCATCTAATTCTTGAACTAGTTTTAATTTTAAAACGAATATGAATTATAAGTTTATTAAGGAAACAAATTATGATAAGTTGCTAACTGCAAGGACTTCAACATCTTGGTAACAGGACTTCAGTTGCACCAGCCGTTGGTTGGCCCCCCATCCGTTCGTTCAGGAAGAACTTGGCTGCGCCCCGCTCTTCGAAGCCCAACAGTCTTGGGTTGTCAAAAGAAACTGTGCAGGAGGATAATGGCTCAAAATCTGACTGTTGTAATGGACAAATGTTTGTGAAAGTTTGTATGGATGGGGTTCCCATTGGAAGAAAACTGAATCTCCAAGCTTATGATAGTTATGAGAAACTATCTGCTGGCATAGACGAACTTTTCCACTATCTTCTTGCAGGTTATCCATCAATTCCCTGTATTCCATCAATAATTTGTCAAACACTTCATATTTCTTTTGGAGCATATCATCGCTAAAGAGTTATATATTAAATTGATATGGCTGAAAGTACAATCTGCTGGTTCTTATTTCATTCTTTCTAATTAACTACAGCACAAAGAAACTATCTGGTTGCTGAAGATGGGAGAAAGATGGAGGAAACAACATCGTTTTCTGATTCCAAACATGAAAACAGGCTGTACACTCTAGTTTATTATGATAATGAAGGGGACAGGATGCTTGTTGGTGATGTCCCATGGAAGTAAGTATTTCCCACTGCTGATCTTGTGGCTTTCTTAATCTAAGCATTTCCCTGACCAAATCCAGTATAATCTGTGGAAAAGGGTGCTTGTTTAGTATTCCTACAATTTATTTTTAATAGTTTGTTAAAATGCTTCCTTATTTTGCTATTCAGTTTCTGCAATAGGAACTCTCTTTCAGCCATCCCTTTGAGCTTTCTTTCTGTGGTGAACTTATTTGGCTTCATTTTAATGCAGCATGTTTGTTTCCACTGTGAAGAGGCTACATGTGTTAAAGAGCTCTGCCATGGCTACTACTGAAATGAAG

mRNA sequence

ATGGTCAGGTGTCCTGAGCTTCTTGACCTGATCTCTAGAGACAGGGAGTGGGACTTGATTAGGAATGGTGCTGAAAGTTCTGTGAGTGAGAACAATAAGCTTGAACTCAGACTTGGACTTCCAGGAGAAGGGGGGCTTGTAGAAGGAAGCAGCTGCTTGAATAGTAACCACGAAAGTGGTGAATTGCCTCTCTCTTCTGCTGAGCTCTTTCCTTCTTGTTTGAACATTAGAAGCAACAAAAGGGCGCTCTATGAAAAAGCTGAAGGAATGGCAGAGGGTGGAATTTGGTTGAATAGAAATGATGAATTCCAACCCCACAAGTTGATTTTCTCTGAGAAAACAGCTGAGAAGGTGTCTCCTCCTACTCCATGCCCAAGTGCTTCCTTATCATCTTCAGCTTTTCAGAGGGAGGCCCAGAAGCTTTCTCTACAATCAAAATCTTCATATTTACAACACTTACTGATGCCTCAGAAATTGGACAAGGTGTCAGAGGAGGCATCAAAGTCAGGCTGTTTGAAAACAGCAGAGTTCCCATACTTAGATGGGAAATCATATCCCAACACTGTTTCAGTTCCTGCAAATTCATCTGAGCCACAACACTCTGACAAAAGGACTTCAGTTGCACCAGCCGTTGGTTGGCCCCCCATCCGTTCGTTCAGGAAGAACTTGGCTGCGCCCCGCTCTTCGAAGCCCAACAGTCTTGGGTTGTCAAAAGAAACTGTGCAGGAGGATAATGGCTCAAAATCTGACTGTTGTAATGGACAAATGTTTGTGAAAGTTTGTATGGATGGGGTTCCCATTGGAAGAAAACTGAATCTCCAAGCTTATGATAGTTATGAGAAACTATCTGCTGGCATAGACGAACTTTTCCACTATCTTCTTGCAGCACAAAGAAACTATCTGGTTGCTGAAGATGGGAGAAAGATGGAGGAAACAACATCGTTTTCTGATTCCAAACATGAAAACAGGCTGTACACTCTAGTTTATTATGATAATGAAGGGGACAGGATGCTTGTTGGTGATGTCCCATGGAACATGTTTGTTTCCACTGTGAAGAGGCTACATGTGTTAAAGAGCTCTGCCATGGCTACTACTGAAATGAAG

Coding sequence (CDS)

ATGGTCAGGTGTCCTGAGCTTCTTGACCTGATCTCTAGAGACAGGGAGTGGGACTTGATTAGGAATGGTGCTGAAAGTTCTGTGAGTGAGAACAATAAGCTTGAACTCAGACTTGGACTTCCAGGAGAAGGGGGGCTTGTAGAAGGAAGCAGCTGCTTGAATAGTAACCACGAAAGTGGTGAATTGCCTCTCTCTTCTGCTGAGCTCTTTCCTTCTTGTTTGAACATTAGAAGCAACAAAAGGGCGCTCTATGAAAAAGCTGAAGGAATGGCAGAGGGTGGAATTTGGTTGAATAGAAATGATGAATTCCAACCCCACAAGTTGATTTTCTCTGAGAAAACAGCTGAGAAGGTGTCTCCTCCTACTCCATGCCCAAGTGCTTCCTTATCATCTTCAGCTTTTCAGAGGGAGGCCCAGAAGCTTTCTCTACAATCAAAATCTTCATATTTACAACACTTACTGATGCCTCAGAAATTGGACAAGGTGTCAGAGGAGGCATCAAAGTCAGGCTGTTTGAAAACAGCAGAGTTCCCATACTTAGATGGGAAATCATATCCCAACACTGTTTCAGTTCCTGCAAATTCATCTGAGCCACAACACTCTGACAAAAGGACTTCAGTTGCACCAGCCGTTGGTTGGCCCCCCATCCGTTCGTTCAGGAAGAACTTGGCTGCGCCCCGCTCTTCGAAGCCCAACAGTCTTGGGTTGTCAAAAGAAACTGTGCAGGAGGATAATGGCTCAAAATCTGACTGTTGTAATGGACAAATGTTTGTGAAAGTTTGTATGGATGGGGTTCCCATTGGAAGAAAACTGAATCTCCAAGCTTATGATAGTTATGAGAAACTATCTGCTGGCATAGACGAACTTTTCCACTATCTTCTTGCAGCACAAAGAAACTATCTGGTTGCTGAAGATGGGAGAAAGATGGAGGAAACAACATCGTTTTCTGATTCCAAACATGAAAACAGGCTGTACACTCTAGTTTATTATGATAATGAAGGGGACAGGATGCTTGTTGGTGATGTCCCATGGAACATGTTTGTTTCCACTGTGAAGAGGCTACATGTGTTAAAGAGCTCTGCCATGGCTACTACTGAAATGAAG

Protein sequence

MVRCPELLDLISRDREWDLIRNGAESSVSENNKLELRLGLPGEGGLVEGSSCLNSNHESGELPLSSAELFPSCLNIRSNKRALYEKAEGMAEGGIWLNRNDEFQPHKLIFSEKTAEKVSPPTPCPSASLSSSAFQREAQKLSLQSKSSYLQHLLMPQKLDKVSEEASKSGCLKTAEFPYLDGKSYPNTVSVPANSSEPQHSDKRTSVAPAVGWPPIRSFRKNLAAPRSSKPNSLGLSKETVQEDNGSKSDCCNGQMFVKVCMDGVPIGRKLNLQAYDSYEKLSAGIDELFHYLLAAQRNYLVAEDGRKMEETTSFSDSKHENRLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLHVLKSSAMATTEMK

Homology

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BLAST of MS008306 vs. NCBI nr
Match: XP_022138828.1 (auxin-responsive protein IAA25-like [Momordica charantia])

HSP 1 Score: 731.5 bits (1887), Expect = 3.6e-207
Identity = 366/368 (99.46%), Postives = 367/368 (99.73%), Query Frame = 0


Query: 1   MVRCPELLDLISRDREWDLIRNGAESSVSENNKLELRLGLPGEGGLVEGSSCLNSNHESG 60
           MVRCPELLDLISRDREWDLIRNGAESSVSENNKLELRLGLPGEGGLVEGSSCLNSNHESG
Sbjct: 1   MVRCPELLDLISRDREWDLIRNGAESSVSENNKLELRLGLPGEGGLVEGSSCLNSNHESG 60

Query: 61  ELPLSSAELFPSCLNIRSNKRALYEKAEGMAEGGIWLNRNDEFQPHKLIFSEKTAEKVSP 120
           ELPLSSAELFPSCLNIRSNKRALYEKAEGMAEGGIWLNRNDEFQPHKLIFSEKTAEKVSP
Sbjct: 61  ELPLSSAELFPSCLNIRSNKRALYEKAEGMAEGGIWLNRNDEFQPHKLIFSEKTAEKVSP 120

Query: 121 PTPCPSASLSSSAFQREAQKLSLQSKSSYLQHLLMPQKLDKVSEEASKSGCLKTAEFPYL 180
           PTPCPSASLSSSAFQREAQKLSLQSKSSYLQHLLMPQKLDKVSEEASKSGCLKTAEFPYL
Sbjct: 121 PTPCPSASLSSSAFQREAQKLSLQSKSSYLQHLLMPQKLDKVSEEASKSGCLKTAEFPYL 180

Query: 181 DGKSYPNTVSVPANSSEPQHSDKRTSVAPAVGWPPIRSFRKNLAAPRSSKPNSLGLSKET 240
           DGKSYPNTVSVPANSSEPQHSDKRTSVAPAVGWPPIRSFR NLAAPRSSKPNSLGLSKET
Sbjct: 181 DGKSYPNTVSVPANSSEPQHSDKRTSVAPAVGWPPIRSFRMNLAAPRSSKPNSLGLSKET 240

Query: 241 VQEDNGSKSDCCNGQMFVKVCMDGVPIGRKLNLQAYDSYEKLSAGIDELFHYLLAAQRNY 300
           VQEDNGSKSDCCNGQMFVKVCMDGVPIGRKLNLQAYDSYEKLSAGIDELFHYLLA+QRNY
Sbjct: 241 VQEDNGSKSDCCNGQMFVKVCMDGVPIGRKLNLQAYDSYEKLSAGIDELFHYLLASQRNY 300

Query: 301 LVAEDGRKMEETTSFSDSKHENRLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLHVLKSS 360
           LVAEDGRKMEETTSFSDSKHENRLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLHVLKSS
Sbjct: 301 LVAEDGRKMEETTSFSDSKHENRLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLHVLKSS 360

Query: 361 AMATTEMK 369
           AMATTEMK
Sbjct: 361 AMATTEMK 368

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BLAST of MS008306 vs. NCBI nr
Match: XP_038896900.1 (auxin-responsive protein IAA6-like [Benincasa hispida])

HSP 1 Score: 573.2 bits (1476), Expect = 1.7e-159
Identity = 302/369 (81.84%), Postives = 318/369 (86.18%), Query Frame = 0


Query: 1   MVRCPELLDLISRDREWDLIRNGAESSVSENNKLELRLGLPGEGGLVEGSSCLNSNHESG 60
           MVRCPELLDLISRDREWDL RNG  SSVSENNKLELRLGLPGE GL EGSSCLNSNHE+G
Sbjct: 1   MVRCPELLDLISRDREWDLTRNGVGSSVSENNKLELRLGLPGEVGLAEGSSCLNSNHENG 60

Query: 61  ELPLSSAELFPSCLNIRSNKRALYEKAEGMAEGGIWLNRNDEFQPHKLIFSEKTAEKVSP 120
           E PLSSA+ FPSCLNIRSNKRALYEKAEG+   G WL+RNDEFQPHKLIF EKTAEKVSP
Sbjct: 61  EFPLSSAKPFPSCLNIRSNKRALYEKAEGITGDGNWLDRNDEFQPHKLIFYEKTAEKVSP 120

Query: 121 PTPCPSASLSSSAFQREAQKLSLQSKSSYLQHLLMPQKLDKVSEEASKSGCLKTAEFPYL 180
           PTPC SASL SSAFQREAQKLS  ++SSYL+   MPQKLD VSEE  K   LKTAE    
Sbjct: 121 PTPCLSASLPSSAFQREAQKLSQPAQSSYLKQFFMPQKLDLVSEEPLKPCSLKTAEL--- 180

Query: 181 DGKSYPNTVSVPANSSEPQHSDKRTSVAPAVGWPPIRSFRKNLAAPRSSKPNSLGLSKET 240
             KS  N+ SVPA SSEP+H DKR SVA AVGWPPIRSFRKN AAPRSSKPNSL LSKET
Sbjct: 181 --KSCLNSGSVPAESSEPKHHDKRASVAAAVGWPPIRSFRKNFAAPRSSKPNSLELSKET 240

Query: 241 VQEDNGSK-SDCCNGQMFVKVCMDGVPIGRKLNLQAYDSYEKLSAGIDELFHYLLAAQRN 300
           VQ++NGSK SDC  GQMFVKVCMDGVPIGRKLNLQAY+SY++LSAGIDELFH LLAAQRN
Sbjct: 241 VQDENGSKLSDCSKGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHCLLAAQRN 300

Query: 301 YLVAEDGRKMEETTSFSDSKHENRLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLHVLKS 360
           YL  EDGRKMEETTS SDSKH+N LYTLVYYDNEGDRMLVGDVPWNMFVSTVKRL VLKS
Sbjct: 301 YLATEDGRKMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLKS 360

Query: 361 SAMATTEMK 369
           S +A TEMK
Sbjct: 361 SVVA-TEMK 363

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BLAST of MS008306 vs. NCBI nr
Match: XP_008466078.1 (PREDICTED: auxin-responsive protein IAA18-like [Cucumis melo] >KAA0038627.1 auxin-responsive protein IAA18-like [Cucumis melo var. makuwa] >TYK31226.1 auxin-responsive protein IAA18-like [Cucumis melo var. makuwa])

HSP 1 Score: 539.3 bits (1388), Expect = 2.6e-149
Identity = 291/369 (78.86%), Postives = 307/369 (83.20%), Query Frame = 0


Query: 1   MVRCPELLDLISRDREWDLIRNGAESSVSENNKLELRLGLPGEGGLVEGSSCLNSNHESG 60
           MVRCPELLDLISRDREWDL RNG  SSV ENNKLELRLGLPGE GL E SSCLNSNHE+G
Sbjct: 1   MVRCPELLDLISRDREWDLTRNGVGSSVIENNKLELRLGLPGEEGLAEASSCLNSNHENG 60

Query: 61  ELPLSSAELFPSCLNIRSNKRALYEKAEGMAEGGIWLNRNDEFQPHKLIFSEKTAEKVSP 120
           E+ LSSA  F SCLNIRSNKRALY K EG+A  G  L+RNDEFQPHKLIF EKTAEKVSP
Sbjct: 61  EISLSSARPFSSCLNIRSNKRALYAKTEGIAGDGNRLDRNDEFQPHKLIFYEKTAEKVSP 120

Query: 121 PTPCPSASLSSSAFQREAQKLSLQSKSSYLQHLLMPQKLDKVSEEASKSGCLKTAEFPYL 180
            TPC SASL SSAFQREAQKLS  S+SSYL+HLLMPQ LD VSEE SK    K  E    
Sbjct: 121 FTPCLSASLPSSAFQREAQKLSQPSQSSYLKHLLMPQNLDLVSEEPSKP---KATEL--- 180

Query: 181 DGKSYPNTVSVPANSSEPQHSDKRTSVAPAVGWPPIRSFRKNLAAPRSSKPNSLGLSKET 240
              S  N+ SVPA SSE +H DKR SVA AVGWPPI SFRKN A PRSSKPNSL LSKET
Sbjct: 181 --NSCLNSNSVPAESSETKHHDKRASVAAAVGWPPIPSFRKNFAVPRSSKPNSLELSKET 240

Query: 241 VQEDNGSK-SDCCNGQMFVKVCMDGVPIGRKLNLQAYDSYEKLSAGIDELFHYLLAAQRN 300
           +Q++NGS+ SDC NGQMFVKVCMDGVPIGRKLNLQAY+SY++LSAGIDELFH LLAAQRN
Sbjct: 241 LQDENGSRLSDCSNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRN 300

Query: 301 YLVAEDGRKMEETTSFSDSKHENRLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLHVLKS 360
           YL AEDGRKMEETTS SDSKH+N LYTLVYYDNEGDRMLVGDVPW MFVSTVKRL VLKS
Sbjct: 301 YLAAEDGRKMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKS 360

Query: 361 SAMATTEMK 369
           S  A TEMK
Sbjct: 361 SVFA-TEMK 360

[Close]

BLAST of MS008306 vs. NCBI nr
Match: XP_004136228.1 (auxin-responsive protein IAA26 isoform X1 [Cucumis sativus] >KGN60312.1 hypothetical protein Csa_002077 [Cucumis sativus])

HSP 1 Score: 530.0 bits (1364), Expect = 1.6e-146
Identity = 286/369 (77.51%), Postives = 304/369 (82.38%), Query Frame = 0


Query: 1   MVRCPELLDLISRDREWDLIRNGAESSVSENNKLELRLGLPGEGGLVEGSSCLNSNHESG 60
           MVRCPELLDLISRDREWDL RNG  SSV ENNKLELRLGLPG     E SSCLN NHE+G
Sbjct: 1   MVRCPELLDLISRDREWDLTRNGVGSSVIENNKLELRLGLPG-----EASSCLNGNHENG 60

Query: 61  ELPLSSAELFPSCLNIRSNKRALYEKAEGMAEGGIWLNRNDEFQPHKLIFSEKTAEKVSP 120
           E+ LSSA+ F SC NIRSNKRALY K EG+A  G  L+RNDEFQPHKLIF EKTAEKVSP
Sbjct: 61  EISLSSAKPFSSCFNIRSNKRALYAKTEGIAGDGNRLDRNDEFQPHKLIFHEKTAEKVSP 120

Query: 121 PTPCPSASLSSSAFQREAQKLSLQSKSSYLQHLLMPQKLDKVSEEASKSGCLKTAEFPYL 180
            TPC SASL SSAF REAQKLS  S+SSYL+H+LMPQ LD VSEE+SK   LK  E    
Sbjct: 121 FTPCLSASLPSSAFHREAQKLSQPSQSSYLKHVLMPQNLDLVSEESSKPCSLKATEL--- 180

Query: 181 DGKSYPNTVSVPANSSEPQHSDKRTSVAPAVGWPPIRSFRKNLAAPRSSKPNSLGLSKET 240
              S  N  SVPA SSE +H DKR SV+ AVGWPPIRSFRKN A PRSSKPNSL  SKET
Sbjct: 181 --NSCLNDGSVPAESSETKHHDKRASVSAAVGWPPIRSFRKNFAVPRSSKPNSLESSKET 240

Query: 241 VQEDNGSK-SDCCNGQMFVKVCMDGVPIGRKLNLQAYDSYEKLSAGIDELFHYLLAAQRN 300
           VQ++NGSK SDC NGQMFVKVCMDGVPIGRKLNLQAY+SY++LSAGIDELFH LLAAQRN
Sbjct: 241 VQDENGSKLSDCYNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRN 300

Query: 301 YLVAEDGRKMEETTSFSDSKHENRLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLHVLKS 360
           YL AEDGRKMEETTS SDSKH+N LYTLVYYDNEGDRMLVGDVPW MFVSTVKRL VLKS
Sbjct: 301 YLAAEDGRKMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKS 358

Query: 361 SAMATTEMK 369
           S +A TEMK
Sbjct: 361 SVVA-TEMK 358

[Close]

BLAST of MS008306 vs. NCBI nr
Match: XP_022936580.1 (auxin-responsive protein IAA16-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 513.1 bits (1320), Expect = 2.0e-141
Identity = 276/369 (74.80%), Postives = 300/369 (81.30%), Query Frame = 0


Query: 1   MVRCPELLDLISRDREWDLIRNGAESSVSENNKLELRLGLPGEGGLVEGSSCLNSNHESG 60
           M R PELLDLIS DREW+L R G  SSVSENNKLELRLGLPGE  L EGS+CLN +HES 
Sbjct: 1   MSRRPELLDLISGDREWELNRIGVGSSVSENNKLELRLGLPGEDRLAEGSNCLNFSHESD 60

Query: 61  ELPLSSAELFPSCLNIRSNKRALYEKAEGMAEGGIWLNRNDEFQPHKLIFSEKTAEKVSP 120
           E  LSSA+LFPSCLNIRSNKRAL                 DEF+PHKL+FSEKTAEKV+P
Sbjct: 61  ESHLSSAKLFPSCLNIRSNKRALC----------------DEFRPHKLVFSEKTAEKVAP 120

Query: 121 PTPCPSASLSSSAFQREAQKLSLQSKSSYLQHLLMPQKLDKVSEEASKSGCLKTAEFPYL 180
              C  ASL SSAFQREAQKLS  S+S YL+HLLMPQ+LD VSEE SK+  LKTAEFPY 
Sbjct: 121 LIHCLGASLPSSAFQREAQKLSQPSQSLYLEHLLMPQRLDLVSEEPSKTCSLKTAEFPYS 180

Query: 181 DGKSYPNTVSVPANSSEPQHSDKRTSVAPAVGWPPIRSFRKNLAAPRSSKPNSLGLSKET 240
            GKS  N  SVPA SSEP+H DKR SVA AVGWPPIRSFRKN A PRSSKPNSL LSKE 
Sbjct: 181 TGKSCLNNGSVPAESSEPKHHDKRASVASAVGWPPIRSFRKNFAGPRSSKPNSLVLSKEA 240

Query: 241 VQEDNGSK-SDCCNGQMFVKVCMDGVPIGRKLNLQAYDSYEKLSAGIDELFHYLLAAQRN 300
           +Q++NGSK S C NGQMFVKVCMDG+PIGRKLNLQAY+ Y++LSAGIDELFH LLAAQRN
Sbjct: 241 LQDENGSKLSHCSNGQMFVKVCMDGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLAAQRN 300

Query: 301 YLVAEDGRKMEETTSFSDSKHENRLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLHVLKS 360
           YL AEDGRK+EETTS SDSKHEN LYTLVYYDNEGDRMLVGDVPWNMFVSTVKRL VL++
Sbjct: 301 YLAAEDGRKVEETTSLSDSKHENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLRN 352

Query: 361 SAMATTEMK 369
           + +A TEMK
Sbjct: 361 AVVA-TEMK 352

[Close]

BLAST of MS008306 vs. ExPASy Swiss-Prot
Match: Q8LAL2 (Auxin-responsive protein IAA26 OS=Arabidopsis thaliana OX=3702 GN=IAA26 PE=1 SV=2)

HSP 1 Score: 154.8 bits (390), Expect = 1.8e-36
Identity = 93/178 (52.25%), Postives = 119/178 (66.85%), Query Frame = 0


Query: 192 PAN--SSEPQHSDKRTSVAPAVGWPPIRSFRKNLAAPRSSK-PNSLGLSKETVQEDNGSK 251
           P+N  +S P  S KRT+  P VGWPP+RSFRKNLA+  SSK  N      +  + D+G K
Sbjct: 84  PSNKTTSVPHISQKRTAPGPVVGWPPVRSFRKNLASTSSSKLGNESSHGGQINKSDDGEK 143

Query: 252 S-DCCNGQMFVKVCMDGVPIGRKLNLQAYDSYEKLSAGIDELFHYLLAAQRNYLVAEDGR 311
             +     MFVK+ MDGVPIGRK++L AY+SYE+LS  +D+LF  LLAAQR+     DG+
Sbjct: 144 QVETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRD---ISDGQ 203

Query: 312 KMEE-TTSFSDSKHENRLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLHVLKSSAMAT 365
             E+      D K E   +TL Y DNEGD+MLVGDVPW MFVS+VKRL V+KSS +++
Sbjct: 204 GEEKPIIGLLDGKGE---FTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSEISS 255

[Close]

BLAST of MS008306 vs. ExPASy Swiss-Prot
Match: Q8LQ74 (Auxin-responsive protein IAA6 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA6 PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 7.0e-36
Identity = 126/375 (33.60%), Postives = 174/375 (46.40%), Query Frame = 0


Query: 5   PELLDLISRDREWDLIR-------NGAESSVSENNKLELRLGLPG--EGGLVEGSSCLNS 64
           P+LLDLI  ++EW L           A     E+ KL+L+LGLPG  E    E       
Sbjct: 13  PQLLDLIPDEKEWKLREALGLGRSRNAGFDGEEDKKLDLKLGLPGFIEDDEAETLRDYRL 72

Query: 65  NHESGELPLS----SAELFPSCLNIRSNKRALYEKAEGMAEGGIWLNRNDEFQPHKLIFS 124
             ES  L LS     ++   S       KR   +  E   EG      ND+ Q       
Sbjct: 73  QQESPSLSLSFFPKHSKTTSSTTTTTGAKRGFIDTVEDKTEG-----YNDQKQ------- 132

Query: 125 EKTAEKVSPPTPCPSASLSSSAFQREAQKLSLQSKSSYLQHLLMPQKLDKVSEEASKSGC 184
                                           Q+++   + L + + +  VSE   K GC
Sbjct: 133 --------------------------------QARAGCGKELAVEEMIAAVSER--KKGC 192

Query: 185 LKTAEFPYLDGKSYPNTVSVPANSSEPQHSDKRTSVAPAVGWPPIRSFRKNLAAPRSSKP 244
                 P+          + PA  + PQ +  R + AP VGWPPIRSFR+NLA+  SSK 
Sbjct: 193 CPPPPPPH-------GAPATPAR-NRPQ-TQGRGAAAPVVGWPPIRSFRRNLASSSSSKH 252

Query: 245 NSLGLSKETVQED-NGSKSDCCNGQMFVKVCMDGVPIGRKLNLQAYDSYEKLSAGIDELF 304
                S E   ++ N   +  C     VK+ MDG+PIGRK++L AY+SY+ LS+ + +LF
Sbjct: 253 -----SPEPQNDNANAKVTLTCKKNPLVKINMDGIPIGRKIDLAAYNSYDGLSSAVKQLF 312

Query: 305 HYLLAAQRNYLVAEDGRKMEETTSFSDSKHENRLYTLVYYDNEGDRMLVGDVPWNMFVST 364
           H  L AQ++   A+  ++  +   F      +  YTLVY D+EGDRMLVGDVPW +FVST
Sbjct: 313 HGFLQAQKDQTNAQIAQQGADDKIFYQLLDGSGEYTLVYEDSEGDRMLVGDVPWKVFVST 327

Query: 365 VKRLHVLKSSAMATT 366
            KRL VL+SS ++ T
Sbjct: 373 AKRLRVLRSSELSHT 327

[Close]

BLAST of MS008306 vs. ExPASy Swiss-Prot
Match: Q5W670 (Auxin-responsive protein IAA18 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA18 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.7e-35
Identity = 82/173 (47.40%), Postives = 111/173 (64.16%), Query Frame = 0


Query: 190 SVPANSSEPQHSDKRTSVAPAVGWPPIRSFRKNLAAPRSSKPNSLGLSKETVQEDNGSKS 249
           S  A+SS PQ    R ++ P VGWPPIRSFR+NL    S K +     ++  + D+ +K 
Sbjct: 151 SAAAHSSNPQ---GRGAIPPVVGWPPIRSFRRNLTNGSSFKQSP---ERQNDEADDKAK- 210

Query: 250 DCCNGQMFVKVCMDGVPIGRKLNLQAYDSYEKLSAGIDELFHYLLAAQRNYLVAEDGRKM 309
             C  +  VK+ MDG+PIGRK++LQ YDSY+KLS+ ++ELF   L AQ++   AE G + 
Sbjct: 211 PICKKRPLVKINMDGIPIGRKVDLQIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQG 270

Query: 310 EETTSFSDSKHENRLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLHVLKSSAM 363
            E   FS       +YTLVY DN+GDRML GD+PW +FVSTVKRL V++ S +
Sbjct: 271 AEDKIFSGLLDGTGVYTLVYEDNDGDRMLAGDIPWKVFVSTVKRLRVMRRSEL 316

[Close]

BLAST of MS008306 vs. ExPASy Swiss-Prot
Match: O24408 (Auxin-responsive protein IAA18 OS=Arabidopsis thaliana OX=3702 GN=IAA18 PE=1 SV=2)

HSP 1 Score: 147.1 bits (370), Expect = 3.8e-34
Identity = 88/177 (49.72%), Postives = 116/177 (65.54%), Query Frame = 0


Query: 195 SSEPQHSDKRTSVAPAVGWPPIRSFRKNLAAPRSSK-----PNSLGLSKETVQEDNGSKS 254
           SS    S KRT+  P VGWPP+RSFRKNLA+  SSK       S G++ +  + D  +K+
Sbjct: 82  SSTKTTSHKRTAPGPVVGWPPVRSFRKNLASGSSSKLGNDSTTSNGVTLKNQKCDAAAKT 141

Query: 255 --DCCNGQMFVKVCMDGVPIGRKLNLQAYDSYEKLSAGIDELFHYLLAAQRNYLVAEDGR 314
                 G MFVK+ M GVPIGRK++L A++SYE+LS  +D+LF  LLAAQR++  + +  
Sbjct: 142 TEPKRQGGMFVKINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQRDFPSSIEDE 201

Query: 315 KMEETTSFSDSKHENRLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLHVLKSSAMAT 365
           K    T   D   E   YTL Y DNEGD+MLVGDVPW MFVS+VKRL V+K+S +++
Sbjct: 202 K--PITGLLDGNGE---YTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSEISS 253

[Close]

BLAST of MS008306 vs. ExPASy Swiss-Prot
Match: Q6H543 (Auxin-responsive protein IAA7 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA7 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.2e-33
Identity = 79/165 (47.88%), Postives = 107/165 (64.85%), Query Frame = 0


Query: 204 RTSVAPAVGWPPIRSFRKNLAAPRSSKPNSLGLSKETVQEDNG---SKSDCCNGQMFVKV 263
           R+   P VGWPP+R+FR+NLA            SK +++  NG   +K++      F+K+
Sbjct: 133 RSPSTPVVGWPPVRTFRRNLATS----------SKASLELQNGKKAAKAEEIKRAPFIKI 192

Query: 264 CMDGVPIGRKLNLQAYDSYEKLSAGIDELFHYLLAAQRNYLVAEDGRKMEETTSFSDSKH 323
            MDGVPIGRK++L A+DSYEKLS  +D+LF  LLAAQR+ L A      +E  + S    
Sbjct: 193 NMDGVPIGRKIDLNAFDSYEKLSLAVDKLFRGLLAAQRDPLTAGAKDCQQEDVAISGLLD 252

Query: 324 ENRLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLHVLKSSAMATT 366
               YTLVY D EGD++LVGDVPW MFVS+VKRL VLK+S ++++
Sbjct: 253 GTGEYTLVYEDYEGDKVLVGDVPWGMFVSSVKRLRVLKTSDLSSS 287

[Close]

BLAST of MS008306 vs. ExPASy TrEMBL
Match: A0A6J1CE85 (Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111009901 PE=3 SV=1)

HSP 1 Score: 731.5 bits (1887), Expect = 1.8e-207
Identity = 366/368 (99.46%), Postives = 367/368 (99.73%), Query Frame = 0


Query: 1   MVRCPELLDLISRDREWDLIRNGAESSVSENNKLELRLGLPGEGGLVEGSSCLNSNHESG 60
           MVRCPELLDLISRDREWDLIRNGAESSVSENNKLELRLGLPGEGGLVEGSSCLNSNHESG
Sbjct: 1   MVRCPELLDLISRDREWDLIRNGAESSVSENNKLELRLGLPGEGGLVEGSSCLNSNHESG 60

Query: 61  ELPLSSAELFPSCLNIRSNKRALYEKAEGMAEGGIWLNRNDEFQPHKLIFSEKTAEKVSP 120
           ELPLSSAELFPSCLNIRSNKRALYEKAEGMAEGGIWLNRNDEFQPHKLIFSEKTAEKVSP
Sbjct: 61  ELPLSSAELFPSCLNIRSNKRALYEKAEGMAEGGIWLNRNDEFQPHKLIFSEKTAEKVSP 120

Query: 121 PTPCPSASLSSSAFQREAQKLSLQSKSSYLQHLLMPQKLDKVSEEASKSGCLKTAEFPYL 180
           PTPCPSASLSSSAFQREAQKLSLQSKSSYLQHLLMPQKLDKVSEEASKSGCLKTAEFPYL
Sbjct: 121 PTPCPSASLSSSAFQREAQKLSLQSKSSYLQHLLMPQKLDKVSEEASKSGCLKTAEFPYL 180

Query: 181 DGKSYPNTVSVPANSSEPQHSDKRTSVAPAVGWPPIRSFRKNLAAPRSSKPNSLGLSKET 240
           DGKSYPNTVSVPANSSEPQHSDKRTSVAPAVGWPPIRSFR NLAAPRSSKPNSLGLSKET
Sbjct: 181 DGKSYPNTVSVPANSSEPQHSDKRTSVAPAVGWPPIRSFRMNLAAPRSSKPNSLGLSKET 240

Query: 241 VQEDNGSKSDCCNGQMFVKVCMDGVPIGRKLNLQAYDSYEKLSAGIDELFHYLLAAQRNY 300
           VQEDNGSKSDCCNGQMFVKVCMDGVPIGRKLNLQAYDSYEKLSAGIDELFHYLLA+QRNY
Sbjct: 241 VQEDNGSKSDCCNGQMFVKVCMDGVPIGRKLNLQAYDSYEKLSAGIDELFHYLLASQRNY 300

Query: 301 LVAEDGRKMEETTSFSDSKHENRLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLHVLKSS 360
           LVAEDGRKMEETTSFSDSKHENRLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLHVLKSS
Sbjct: 301 LVAEDGRKMEETTSFSDSKHENRLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLHVLKSS 360

Query: 361 AMATTEMK 369
           AMATTEMK
Sbjct: 361 AMATTEMK 368

[Close]

BLAST of MS008306 vs. ExPASy TrEMBL
Match: A0A5D3E6G7 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005120 PE=3 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 1.3e-149
Identity = 291/369 (78.86%), Postives = 307/369 (83.20%), Query Frame = 0


Query: 1   MVRCPELLDLISRDREWDLIRNGAESSVSENNKLELRLGLPGEGGLVEGSSCLNSNHESG 60
           MVRCPELLDLISRDREWDL RNG  SSV ENNKLELRLGLPGE GL E SSCLNSNHE+G
Sbjct: 1   MVRCPELLDLISRDREWDLTRNGVGSSVIENNKLELRLGLPGEEGLAEASSCLNSNHENG 60

Query: 61  ELPLSSAELFPSCLNIRSNKRALYEKAEGMAEGGIWLNRNDEFQPHKLIFSEKTAEKVSP 120
           E+ LSSA  F SCLNIRSNKRALY K EG+A  G  L+RNDEFQPHKLIF EKTAEKVSP
Sbjct: 61  EISLSSARPFSSCLNIRSNKRALYAKTEGIAGDGNRLDRNDEFQPHKLIFYEKTAEKVSP 120

Query: 121 PTPCPSASLSSSAFQREAQKLSLQSKSSYLQHLLMPQKLDKVSEEASKSGCLKTAEFPYL 180
            TPC SASL SSAFQREAQKLS  S+SSYL+HLLMPQ LD VSEE SK    K  E    
Sbjct: 121 FTPCLSASLPSSAFQREAQKLSQPSQSSYLKHLLMPQNLDLVSEEPSKP---KATEL--- 180

Query: 181 DGKSYPNTVSVPANSSEPQHSDKRTSVAPAVGWPPIRSFRKNLAAPRSSKPNSLGLSKET 240
              S  N+ SVPA SSE +H DKR SVA AVGWPPI SFRKN A PRSSKPNSL LSKET
Sbjct: 181 --NSCLNSNSVPAESSETKHHDKRASVAAAVGWPPIPSFRKNFAVPRSSKPNSLELSKET 240

Query: 241 VQEDNGSK-SDCCNGQMFVKVCMDGVPIGRKLNLQAYDSYEKLSAGIDELFHYLLAAQRN 300
           +Q++NGS+ SDC NGQMFVKVCMDGVPIGRKLNLQAY+SY++LSAGIDELFH LLAAQRN
Sbjct: 241 LQDENGSRLSDCSNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRN 300

Query: 301 YLVAEDGRKMEETTSFSDSKHENRLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLHVLKS 360
           YL AEDGRKMEETTS SDSKH+N LYTLVYYDNEGDRMLVGDVPW MFVSTVKRL VLKS
Sbjct: 301 YLAAEDGRKMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKS 360

Query: 361 SAMATTEMK 369
           S  A TEMK
Sbjct: 361 SVFA-TEMK 360

[Close]

BLAST of MS008306 vs. ExPASy TrEMBL
Match: A0A1S3CRT9 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103503610 PE=3 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 1.3e-149
Identity = 291/369 (78.86%), Postives = 307/369 (83.20%), Query Frame = 0


Query: 1   MVRCPELLDLISRDREWDLIRNGAESSVSENNKLELRLGLPGEGGLVEGSSCLNSNHESG 60
           MVRCPELLDLISRDREWDL RNG  SSV ENNKLELRLGLPGE GL E SSCLNSNHE+G
Sbjct: 1   MVRCPELLDLISRDREWDLTRNGVGSSVIENNKLELRLGLPGEEGLAEASSCLNSNHENG 60

Query: 61  ELPLSSAELFPSCLNIRSNKRALYEKAEGMAEGGIWLNRNDEFQPHKLIFSEKTAEKVSP 120
           E+ LSSA  F SCLNIRSNKRALY K EG+A  G  L+RNDEFQPHKLIF EKTAEKVSP
Sbjct: 61  EISLSSARPFSSCLNIRSNKRALYAKTEGIAGDGNRLDRNDEFQPHKLIFYEKTAEKVSP 120

Query: 121 PTPCPSASLSSSAFQREAQKLSLQSKSSYLQHLLMPQKLDKVSEEASKSGCLKTAEFPYL 180
            TPC SASL SSAFQREAQKLS  S+SSYL+HLLMPQ LD VSEE SK    K  E    
Sbjct: 121 FTPCLSASLPSSAFQREAQKLSQPSQSSYLKHLLMPQNLDLVSEEPSKP---KATEL--- 180

Query: 181 DGKSYPNTVSVPANSSEPQHSDKRTSVAPAVGWPPIRSFRKNLAAPRSSKPNSLGLSKET 240
              S  N+ SVPA SSE +H DKR SVA AVGWPPI SFRKN A PRSSKPNSL LSKET
Sbjct: 181 --NSCLNSNSVPAESSETKHHDKRASVAAAVGWPPIPSFRKNFAVPRSSKPNSLELSKET 240

Query: 241 VQEDNGSK-SDCCNGQMFVKVCMDGVPIGRKLNLQAYDSYEKLSAGIDELFHYLLAAQRN 300
           +Q++NGS+ SDC NGQMFVKVCMDGVPIGRKLNLQAY+SY++LSAGIDELFH LLAAQRN
Sbjct: 241 LQDENGSRLSDCSNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRN 300

Query: 301 YLVAEDGRKMEETTSFSDSKHENRLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLHVLKS 360
           YL AEDGRKMEETTS SDSKH+N LYTLVYYDNEGDRMLVGDVPW MFVSTVKRL VLKS
Sbjct: 301 YLAAEDGRKMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKS 360

Query: 361 SAMATTEMK 369
           S  A TEMK
Sbjct: 361 SVFA-TEMK 360

[Close]

BLAST of MS008306 vs. ExPASy TrEMBL
Match: A0A0A0LHU0 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_3G895090 PE=3 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 7.8e-147
Identity = 286/369 (77.51%), Postives = 304/369 (82.38%), Query Frame = 0


Query: 1   MVRCPELLDLISRDREWDLIRNGAESSVSENNKLELRLGLPGEGGLVEGSSCLNSNHESG 60
           MVRCPELLDLISRDREWDL RNG  SSV ENNKLELRLGLPG     E SSCLN NHE+G
Sbjct: 1   MVRCPELLDLISRDREWDLTRNGVGSSVIENNKLELRLGLPG-----EASSCLNGNHENG 60

Query: 61  ELPLSSAELFPSCLNIRSNKRALYEKAEGMAEGGIWLNRNDEFQPHKLIFSEKTAEKVSP 120
           E+ LSSA+ F SC NIRSNKRALY K EG+A  G  L+RNDEFQPHKLIF EKTAEKVSP
Sbjct: 61  EISLSSAKPFSSCFNIRSNKRALYAKTEGIAGDGNRLDRNDEFQPHKLIFHEKTAEKVSP 120

Query: 121 PTPCPSASLSSSAFQREAQKLSLQSKSSYLQHLLMPQKLDKVSEEASKSGCLKTAEFPYL 180
            TPC SASL SSAF REAQKLS  S+SSYL+H+LMPQ LD VSEE+SK   LK  E    
Sbjct: 121 FTPCLSASLPSSAFHREAQKLSQPSQSSYLKHVLMPQNLDLVSEESSKPCSLKATEL--- 180

Query: 181 DGKSYPNTVSVPANSSEPQHSDKRTSVAPAVGWPPIRSFRKNLAAPRSSKPNSLGLSKET 240
              S  N  SVPA SSE +H DKR SV+ AVGWPPIRSFRKN A PRSSKPNSL  SKET
Sbjct: 181 --NSCLNDGSVPAESSETKHHDKRASVSAAVGWPPIRSFRKNFAVPRSSKPNSLESSKET 240

Query: 241 VQEDNGSK-SDCCNGQMFVKVCMDGVPIGRKLNLQAYDSYEKLSAGIDELFHYLLAAQRN 300
           VQ++NGSK SDC NGQMFVKVCMDGVPIGRKLNLQAY+SY++LSAGIDELFH LLAAQRN
Sbjct: 241 VQDENGSKLSDCYNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRN 300

Query: 301 YLVAEDGRKMEETTSFSDSKHENRLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLHVLKS 360
           YL AEDGRKMEETTS SDSKH+N LYTLVYYDNEGDRMLVGDVPW MFVSTVKRL VLKS
Sbjct: 301 YLAAEDGRKMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKS 358

Query: 361 SAMATTEMK 369
           S +A TEMK
Sbjct: 361 SVVA-TEMK 358

[Close]

BLAST of MS008306 vs. ExPASy TrEMBL
Match: A0A6J1FE39 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111443144 PE=3 SV=1)

HSP 1 Score: 513.1 bits (1320), Expect = 9.8e-142
Identity = 276/369 (74.80%), Postives = 300/369 (81.30%), Query Frame = 0


Query: 1   MVRCPELLDLISRDREWDLIRNGAESSVSENNKLELRLGLPGEGGLVEGSSCLNSNHESG 60
           M R PELLDLIS DREW+L R G  SSVSENNKLELRLGLPGE  L EGS+CLN +HES 
Sbjct: 1   MSRRPELLDLISGDREWELNRIGVGSSVSENNKLELRLGLPGEDRLAEGSNCLNFSHESD 60

Query: 61  ELPLSSAELFPSCLNIRSNKRALYEKAEGMAEGGIWLNRNDEFQPHKLIFSEKTAEKVSP 120
           E  LSSA+LFPSCLNIRSNKRAL                 DEF+PHKL+FSEKTAEKV+P
Sbjct: 61  ESHLSSAKLFPSCLNIRSNKRALC----------------DEFRPHKLVFSEKTAEKVAP 120

Query: 121 PTPCPSASLSSSAFQREAQKLSLQSKSSYLQHLLMPQKLDKVSEEASKSGCLKTAEFPYL 180
              C  ASL SSAFQREAQKLS  S+S YL+HLLMPQ+LD VSEE SK+  LKTAEFPY 
Sbjct: 121 LIHCLGASLPSSAFQREAQKLSQPSQSLYLEHLLMPQRLDLVSEEPSKTCSLKTAEFPYS 180

Query: 181 DGKSYPNTVSVPANSSEPQHSDKRTSVAPAVGWPPIRSFRKNLAAPRSSKPNSLGLSKET 240
            GKS  N  SVPA SSEP+H DKR SVA AVGWPPIRSFRKN A PRSSKPNSL LSKE 
Sbjct: 181 TGKSCLNNGSVPAESSEPKHHDKRASVASAVGWPPIRSFRKNFAGPRSSKPNSLVLSKEA 240

Query: 241 VQEDNGSK-SDCCNGQMFVKVCMDGVPIGRKLNLQAYDSYEKLSAGIDELFHYLLAAQRN 300
           +Q++NGSK S C NGQMFVKVCMDG+PIGRKLNLQAY+ Y++LSAGIDELFH LLAAQRN
Sbjct: 241 LQDENGSKLSHCSNGQMFVKVCMDGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLAAQRN 300

Query: 301 YLVAEDGRKMEETTSFSDSKHENRLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLHVLKS 360
           YL AEDGRK+EETTS SDSKHEN LYTLVYYDNEGDRMLVGDVPWNMFVSTVKRL VL++
Sbjct: 301 YLAAEDGRKVEETTSLSDSKHENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLRN 352

Query: 361 SAMATTEMK 369
           + +A TEMK
Sbjct: 361 AVVA-TEMK 352

[Close]

BLAST of MS008306 vs. TAIR 10
Match: AT3G16500.1 (phytochrome-associated protein 1 )

HSP 1 Score: 154.8 bits (390), Expect = 1.3e-37
Identity = 93/178 (52.25%), Postives = 119/178 (66.85%), Query Frame = 0


Query: 192 PAN--SSEPQHSDKRTSVAPAVGWPPIRSFRKNLAAPRSSK-PNSLGLSKETVQEDNGSK 251
           P+N  +S P  S KRT+  P VGWPP+RSFRKNLA+  SSK  N      +  + D+G K
Sbjct: 84  PSNKTTSVPHISQKRTAPGPVVGWPPVRSFRKNLASTSSSKLGNESSHGGQINKSDDGEK 143

Query: 252 S-DCCNGQMFVKVCMDGVPIGRKLNLQAYDSYEKLSAGIDELFHYLLAAQRNYLVAEDGR 311
             +     MFVK+ MDGVPIGRK++L AY+SYE+LS  +D+LF  LLAAQR+     DG+
Sbjct: 144 QVETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRD---ISDGQ 203

Query: 312 KMEE-TTSFSDSKHENRLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLHVLKSSAMAT 365
             E+      D K E   +TL Y DNEGD+MLVGDVPW MFVS+VKRL V+KSS +++
Sbjct: 204 GEEKPIIGLLDGKGE---FTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSEISS 255

[Close]

BLAST of MS008306 vs. TAIR 10
Match: AT1G51950.1 (indole-3-acetic acid inducible 18 )

HSP 1 Score: 147.1 bits (370), Expect = 2.7e-35
Identity = 88/177 (49.72%), Postives = 116/177 (65.54%), Query Frame = 0


Query: 195 SSEPQHSDKRTSVAPAVGWPPIRSFRKNLAAPRSSK-----PNSLGLSKETVQEDNGSKS 254
           SS    S KRT+  P VGWPP+RSFRKNLA+  SSK       S G++ +  + D  +K+
Sbjct: 82  SSTKTTSHKRTAPGPVVGWPPVRSFRKNLASGSSSKLGNDSTTSNGVTLKNQKCDAAAKT 141

Query: 255 --DCCNGQMFVKVCMDGVPIGRKLNLQAYDSYEKLSAGIDELFHYLLAAQRNYLVAEDGR 314
                 G MFVK+ M GVPIGRK++L A++SYE+LS  +D+LF  LLAAQR++  + +  
Sbjct: 142 TEPKRQGGMFVKINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQRDFPSSIEDE 201

Query: 315 KMEETTSFSDSKHENRLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLHVLKSSAMAT 365
           K    T   D   E   YTL Y DNEGD+MLVGDVPW MFVS+VKRL V+K+S +++
Sbjct: 202 K--PITGLLDGNGE---YTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSEISS 253

[Close]

BLAST of MS008306 vs. TAIR 10
Match: AT5G25890.1 (indole-3-acetic acid inducible 28 )

HSP 1 Score: 131.0 bits (328), Expect = 2.0e-30
Identity = 73/160 (45.62%), Postives = 94/160 (58.75%), Query Frame = 0


Query: 201 SDKRTSVAPAVGWPPIRSFRKNLAAPRSSKPNSLGLSKETVQEDNGSKSDCCNGQMFVKV 260
           S+ R  VAP VGWPP+RS R+NL A               ++E+   K      +++VK+
Sbjct: 40  SNNRVEVAPVVGWPPVRSSRRNLTA--------------QLKEEMKKKESDEEKELYVKI 99

Query: 261 CMDGVPIGRKLNLQAYDSYEKLSAGIDELFHYLLAAQRNYLVAEDGRKMEETTSFSDSKH 320
            M+GVPIGRK+NL AY++Y++LS  +D+LF                       S  DS  
Sbjct: 100 NMEGVPIGRKVNLSAYNNYQQLSHAVDQLF-----------------------SKKDSWD 159

Query: 321 ENRLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLHVLKSS 361
            NR YTLVY D EGD++LVGDVPW MFVSTVKRLHVLK+S
Sbjct: 160 LNRQYTLVYEDTEGDKVLVGDVPWEMFVSTVKRLHVLKTS 162

[Close]

BLAST of MS008306 vs. TAIR 10
Match: AT4G28640.1 (indole-3-acetic acid inducible 11 )

HSP 1 Score: 103.2 bits (256), Expect = 4.5e-22
Identity = 70/195 (35.90%), Postives = 100/195 (51.28%), Query Frame = 0


Query: 179 YLDGKSYPNTVSVPANSSEPQHSD-----KRTSVAPA------VGWPPIRSFRKNLAAPR 238
           Y D + Y +  S  ++SS    +      KRT+ + A      VGWPPIR++R N    +
Sbjct: 47  YRDCRVYADDSSSSSSSSSLSRASVIAGIKRTADSMAATSGQVVGWPPIRTYRMNSMVNQ 106

Query: 239 SSKPNSLGLSKETVQEDNGSKSDC--CNGQMFVKVCMDGVPIGRKLNLQAYDSYEKLSAG 298
           +    +   + E  Q  N ++SD       MFVKV MDG+PIGRK++L A+  YE LS  
Sbjct: 107 AKASATEDPNLEISQAVNKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNT 166

Query: 299 IDELFHYLLAAQRNYLVAEDGRKMEETTSFSDSKHENRLYTLVYYDNEGDRMLVGDVPWN 358
           ++E+F  L     +  +  DG          D         L Y D EGD MLVGDVPW 
Sbjct: 167 LEEMF--LKPKLGSRTLETDGHMETPVKILPDGSSG---LVLTYEDKEGDWMLVGDVPWG 226

Query: 359 MFVSTVKRLHVLKSS 361
           MF+ +V+RL ++K+S
Sbjct: 227 MFIGSVRRLRIMKTS 236

[Close]

BLAST of MS008306 vs. TAIR 10
Match: AT4G28640.2 (indole-3-acetic acid inducible 11 )

HSP 1 Score: 103.2 bits (256), Expect = 4.5e-22
Identity = 70/195 (35.90%), Postives = 100/195 (51.28%), Query Frame = 0


Query: 179 YLDGKSYPNTVSVPANSSEPQHSD-----KRTSVAPA------VGWPPIRSFRKNLAAPR 238
           Y D + Y +  S  ++SS    +      KRT+ + A      VGWPPIR++R N    +
Sbjct: 47  YRDCRVYADDSSSSSSSSSLSRASVIAGIKRTADSMAATSGQVVGWPPIRTYRMNSMVNQ 106

Query: 239 SSKPNSLGLSKETVQEDNGSKSDC--CNGQMFVKVCMDGVPIGRKLNLQAYDSYEKLSAG 298
           +    +   + E  Q  N ++SD       MFVKV MDG+PIGRK++L A+  YE LS  
Sbjct: 107 AKASATEDPNLEISQAVNKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNT 166

Query: 299 IDELFHYLLAAQRNYLVAEDGRKMEETTSFSDSKHENRLYTLVYYDNEGDRMLVGDVPWN 358
           ++E+F  L     +  +  DG          D         L Y D EGD MLVGDVPW 
Sbjct: 167 LEEMF--LKPKLGSRTLETDGHMETPVKILPDGSSG---LVLTYEDKEGDWMLVGDVPWG 226

Query: 359 MFVSTVKRLHVLKSS 361
           MF+ +V+RL ++K+S
Sbjct: 227 MFIGSVRRLRIMKTS 236

The following BLAST results are available for this feature:

BLAST of MS008306 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138828.1	3.6e-207	99.46	auxin-responsive protein IAA25-like [Momordica charantia]	[more]
XP_038896900.1	1.7e-159	81.84	auxin-responsive protein IAA6-like [Benincasa hispida]	[more]
XP_008466078.1	2.6e-149	78.86	PREDICTED: auxin-responsive protein IAA18-like [Cucumis melo] >KAA0038627.1 auxi...	[more]
XP_004136228.1	1.6e-146	77.51	auxin-responsive protein IAA26 isoform X1 [Cucumis sativus] >KGN60312.1 hypothet...	[more]
XP_022936580.1	2.0e-141	74.80	auxin-responsive protein IAA16-like isoform X2 [Cucurbita moschata]	[more]

BLAST of MS008306 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LAL2	1.8e-36	52.25	Auxin-responsive protein IAA26 OS=Arabidopsis thaliana OX=3702 GN=IAA26 PE=1 SV=...	[more]
Q8LQ74	7.0e-36	33.60	Auxin-responsive protein IAA6 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA6 P...	[more]
Q5W670	2.7e-35	47.40	Auxin-responsive protein IAA18 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA18...	[more]
O24408	3.8e-34	49.72	Auxin-responsive protein IAA18 OS=Arabidopsis thaliana OX=3702 GN=IAA18 PE=1 SV=...	[more]
Q6H543	4.2e-33	47.88	Auxin-responsive protein IAA7 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA7 P...	[more]

BLAST of MS008306 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CE85	1.8e-207	99.46	Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111009901 PE=3 SV=...	[more]
A0A5D3E6G7	1.3e-149	78.86	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CRT9	1.3e-149	78.86	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103503610 PE=3 SV=1	[more]
A0A0A0LHU0	7.8e-147	77.51	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_3G895090 PE=3 SV=1	[more]
A0A6J1FE39	9.8e-142	74.80	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111443144 PE=3 SV=1	[more]

BLAST of MS008306 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16500.1	1.3e-37	52.25	phytochrome-associated protein 1	[more]
AT1G51950.1	2.7e-35	49.72	indole-3-acetic acid inducible 18	[more]
AT5G25890.1	2.0e-30	45.63	indole-3-acetic acid inducible 28	[more]
AT4G28640.1	4.5e-22	35.90	indole-3-acetic acid inducible 11	[more]
AT4G28640.2	4.5e-22	35.90	indole-3-acetic acid inducible 11	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 34..362 e-value: 2.8E-57 score: 194.4
None	No IPR available	GENE3D	3.10.20.90		coord: 250..368 e-value: 7.9E-34 score: 117.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..248
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 225..248
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..208
None	No IPR available	PANTHER	PTHR31734:SF191	AUXIN-RESPONSIVE PROTEIN	coord: 7..365
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 245..356
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 7..365
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 255..359 score: 20.080349

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS008306.1	MS008306.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding