MS008278 (gene) Bitter gourd (TR) v1

Overview
NameMS008278
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionVQ domain-containing protein
Locationscaffold4: 131903 .. 133039 (+)
RNA-Seq ExpressionMS008278
SyntenyMS008278
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCTGGTAGTGGAAGTTTGCAATCGTCAAGTGGCGGAGATGAAGAGTACGATTCTGCTCATCAACCACCACTCATCCCCCCGCCGCCATCTTTCAGCTTCCACAATATTATTCCTCCTTCTCACATCGGATCATCAATAATCCCTCCTCAAATCCCTTTCCATAACTTCCAAAACCTCCCCCCAATTTTCTACGATTTCTCCTCCAATTACTCTAATTTGCAACCCCACTTCAACCCCGATGCTAATTCCTTCCCCAATCTCGACCCCCCTCTACGGCCTACATCTCAACCCACCGCCGCCGCCGTTTCTCCTCCTACCCAGAACCAGCCTCCAGTCCGCGGAGGCCCGTCATCTGCGCCCGCGGGGCTACATCCCAAAGTCAGCACAAAGAAGAGAACCAGAGCTTCGCGGCGAGCCCCCACCACCGTTCTCACCACGGACACCTCGAATTTCCGAGCAATGGTGCAGGAGTTCACCGGAATCCCCTCGCCCCCGTTCTCCGCCGGTGGCTCTTCCTACTCTCGCCGCTTCGATCTCTTCACCTCAAGGACGACTGCCGGTACTAATCTAGAACCCTCCGGATCGGGGGGTTTTTACCCTTCTCGCTCAAAGGCCCAGCAGGTATCCCCATTGTTGAATAATGTTATGGTGGAGCGTGAAACAATGTCGAATATGCAGCAGACACCGGGAGGGATTTTTTCGTTGCAGTCGCTGTCAGGGCATGATTTCAATTCCACAAATGTAGAGGCCGGGCAGAGCCACAGCCACAGCCACATTGATGGCAGCGGGCAGCTACTGTCCGCGCTACAAAACGATGAAATCTGGAAAAGAGGACGTCCCAATAACAACAACACTGCGAACTGTAAGTTGAACTTTTCCTCGGGGGGCTCTTCGTCGAATAAGGAGATGGGGAATATTGTTTCCAGTACAGTGGATTCCTGGATTTGCCCATCGGATTAATTTTAATTTCTTTTTTTTTTTTTTTTGTAAAAAAGAGAGATGGTGAATTTTTTAGGTAATCAAAATGGTAATGATGGTGGTGCTGCTGATGATTTTAATGATGATTGTGGTGGTGGGCGAGGCGATGATGGAAATTGGGAAAGAAGAACGCCCGAGGCAACCCCATCAACA

mRNA sequence

ATGGATTCTGGTAGTGGAAGTTTGCAATCGTCAAGTGGCGGAGATGAAGAGTACGATTCTGCTCATCAACCACCACTCATCCCCCCGCCGCCATCTTTCAGCTTCCACAATATTATTCCTCCTTCTCACATCGGATCATCAATAATCCCTCCTCAAATCCCTTTCCATAACTTCCAAAACCTCCCCCCAATTTTCTACGATTTCTCCTCCAATTACTCTAATTTGCAACCCCACTTCAACCCCGATGCTAATTCCTTCCCCAATCTCGACCCCCCTCTACGGCCTACATCTCAACCCACCGCCGCCGCCGTTTCTCCTCCTACCCAGAACCAGCCTCCAGTCCGCGGAGGCCCGTCATCTGCGCCCGCGGGGCTACATCCCAAAGTCAGCACAAAGAAGAGAACCAGAGCTTCGCGGCGAGCCCCCACCACCGTTCTCACCACGGACACCTCGAATTTCCGAGCAATGGTGCAGGAGTTCACCGGAATCCCCTCGCCCCCGTTCTCCGCCGGTGGCTCTTCCTACTCTCGCCGCTTCGATCTCTTCACCTCAAGGACGACTGCCGGTACTAATCTAGAACCCTCCGGATCGGGGGGTTTTTACCCTTCTCGCTCAAAGGCCCAGCAGGTATCCCCATTGTTGAATAATGTTATGGTGGAGCGTGAAACAATGTCGAATATGCAGCAGACACCGGGAGGGATTTTTTCGTTGCAGTCGCTGTCAGGGCATGATTTCAATTCCACAAATGTAGAGGCCGGGCAGAGCCACAGCCACAGCCACATTGATGGCAGCGGGCAGCTACTGTCCGCGCTACAAAACGATGAAATCTGGAAAAGAGGACGTCCCAATAACAACAACACTGCGAACTGTAATCAAAATGGTAATGATGGTGGTGCTGCTGATGATTTTAATGATGATTGTGGTGGTGGGCGAGGCGATGATGGAAATTGGGAAAGAAGAACGCCCGAGGCAACCCCATCAACA

Coding sequence (CDS)

ATGGATTCTGGTAGTGGAAGTTTGCAATCGTCAAGTGGCGGAGATGAAGAGTACGATTCTGCTCATCAACCACCACTCATCCCCCCGCCGCCATCTTTCAGCTTCCACAATATTATTCCTCCTTCTCACATCGGATCATCAATAATCCCTCCTCAAATCCCTTTCCATAACTTCCAAAACCTCCCCCCAATTTTCTACGATTTCTCCTCCAATTACTCTAATTTGCAACCCCACTTCAACCCCGATGCTAATTCCTTCCCCAATCTCGACCCCCCTCTACGGCCTACATCTCAACCCACCGCCGCCGCCGTTTCTCCTCCTACCCAGAACCAGCCTCCAGTCCGCGGAGGCCCGTCATCTGCGCCCGCGGGGCTACATCCCAAAGTCAGCACAAAGAAGAGAACCAGAGCTTCGCGGCGAGCCCCCACCACCGTTCTCACCACGGACACCTCGAATTTCCGAGCAATGGTGCAGGAGTTCACCGGAATCCCCTCGCCCCCGTTCTCCGCCGGTGGCTCTTCCTACTCTCGCCGCTTCGATCTCTTCACCTCAAGGACGACTGCCGGTACTAATCTAGAACCCTCCGGATCGGGGGGTTTTTACCCTTCTCGCTCAAAGGCCCAGCAGGTATCCCCATTGTTGAATAATGTTATGGTGGAGCGTGAAACAATGTCGAATATGCAGCAGACACCGGGAGGGATTTTTTCGTTGCAGTCGCTGTCAGGGCATGATTTCAATTCCACAAATGTAGAGGCCGGGCAGAGCCACAGCCACAGCCACATTGATGGCAGCGGGCAGCTACTGTCCGCGCTACAAAACGATGAAATCTGGAAAAGAGGACGTCCCAATAACAACAACACTGCGAACTGTAATCAAAATGGTAATGATGGTGGTGCTGCTGATGATTTTAATGATGATTGTGGTGGTGGGCGAGGCGATGATGGAAATTGGGAAAGAAGAACGCCCGAGGCAACCCCATCAACA

Protein sequence

MDSGSGSLQSSSGGDEEYDSAHQPPLIPPPPSFSFHNIIPPSHIGSSIIPPQIPFHNFQNLPPIFYDFSSNYSNLQPHFNPDANSFPNLDPPLRPTSQPTAAAVSPPTQNQPPVRGGPSSAPAGLHPKVSTKKRTRASRRAPTTVLTTDTSNFRAMVQEFTGIPSPPFSAGGSSYSRRFDLFTSRTTAGTNLEPSGSGGFYPSRSKAQQVSPLLNNVMVERETMSNMQQTPGGIFSLQSLSGHDFNSTNVEAGQSHSHSHIDGSGQLLSALQNDEIWKRGRPNNNNTANCNQNGNDGGAADDFNDDCGGGRGDDGNWERRTPEATPST
Homology
BLAST of MS008278 vs. NCBI nr
Match: XP_038898813.1 (uncharacterized serine-rich protein C215.13-like [Benincasa hispida])

HSP 1 Score: 234.6 bits (597), Expect = 1.2e-57
Identity = 178/324 (54.94%), Postives = 199/324 (61.42%), Query Frame = 0

Query: 1   MDSGSGSLQSSSGGD--EEYDSA--HQPPLIPPPPSFSFHNIIPPSH------------- 60
           MDSGSGSLQSSSG D  EEYDS+  HQP L PPPP F  +NIIP S              
Sbjct: 1   MDSGSGSLQSSSGADEVEEYDSSSHHQPQLFPPPPLFFNNNIIPFSSSSSSSSSSSSSSS 60

Query: 61  ---------IGSSIIPPQIPFHNFQN--LPPIFYDFSSNYSNLQPHFNPD--ANSFPNLD 120
                      SS IP Q+PFH +QN  L P FYDF S+Y N    FNPD  +NSF NLD
Sbjct: 61  SSSSSLLGCSSSSSIPHQLPFH-YQNHHLLPSFYDFPSSYHN----FNPDNSSNSFVNLD 120

Query: 121 PPLRPTSQPTAAAVSP----PTQNQPPVRGGPSSAPAGLHPKVSTKKRTRASRRAPTTVL 180
             LR  S+PT     P     TQNQ  +R  PSS+   LHPKV+TKKRTRASRRAPTTVL
Sbjct: 121 -VLR--SEPTHFKNPPISDGSTQNQIQIRSTPSSSSGALHPKVTTKKRTRASRRAPTTVL 180

Query: 181 TTDTSNFRAMVQEFTGIPSPPFSAGGSSYSRRFDLF---TSRTTAGTNLEPSGSGGFYPS 240
           TTDT+NFRAMVQEFTGIPSPPF+AGGSSYSRRFDLF    +  +A TNLE SG  G YPS
Sbjct: 181 TTDTTNFRAMVQEFTGIPSPPFTAGGSSYSRRFDLFGLVRTNNSAATNLEASGL-GVYPS 240

Query: 241 RSKAQQVSPLLNNVMVERETMSNMQQTPGGIFSLQSLSGHDFNSTNVE----AGQSHSHS 282
           RSK   V      V    ET        GGIFS Q++SGHDFN+ + E    +G   +  
Sbjct: 241 RSKVDNV------VRQPAET--------GGIFSFQTVSGHDFNANSKEVIGGSGHLETPH 300

BLAST of MS008278 vs. NCBI nr
Match: KAG6608078.1 (hypothetical protein SDJN03_01420, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 219.2 bits (557), Expect = 5.4e-53
Identity = 170/327 (51.99%), Postives = 194/327 (59.33%), Query Frame = 0

Query: 1   MDSGSGSLQSSSGGDEEYDSAH------------QPPLIPPPPSFSFHN--IIPPSHIGS 60
           MDSGSGSLQSSSGGD++YDS H            QP L PPPP   F N  I PPSH   
Sbjct: 1   MDSGSGSLQSSSGGDDDYDSHHHHHHQQQQQQQQQPHLFPPPPPPLFFNATIPPPSH--- 60

Query: 61  SIIPPQIPFHNFQNLPPIFYDFSSNYSNLQP-HFNPD-ANSFPNLDP----PLRPTSQPT 120
             +P  +  HNFQNL    YDF SN+ NLQP +FN D +NSF NLD     P    S+PT
Sbjct: 61  QPLPFHLSPHNFQNL----YDFPSNF-NLQPTNFNHDSSNSFLNLDDVRPNPTSLRSEPT 120

Query: 121 AAAVSPPT-------QNQPPVRGGPSSAPAGLHPKVSTKKRTRASRRAPTTVLTTDTSNF 180
                 PT         Q P R   + +P GLHPK +TKKRTRASRRAPTTVLTTDT+NF
Sbjct: 121 TTTFKTPTAAEGSTHHTQIPNR-STNPSPTGLHPKPTTKKRTRASRRAPTTVLTTDTTNF 180

Query: 181 RAMVQEFTGIPSPPFSAGG------SSYSRRFDLFTSRTTAGTNLEPSGSG---GFYPSR 240
           RAMVQEFTGIPSPPF+A G      SS+SRRFDLF S     TN+E SGSG   GF+PSR
Sbjct: 181 RAMVQEFTGIPSPPFTAPGSSSSSSSSFSRRFDLFASVRATTTNIEASGSGSGSGFHPSR 240

Query: 241 SKAQQVSPL---LNNVMVERETMSNMQQTPGGIFSLQSLSGHDFNSTNVEAGQSHSHSHI 289
           SK Q  S L    NNV ++ +  S +Q  P GIFS QSLS      T++E    H  S  
Sbjct: 241 SKVQLFSSLNNNNNNVTMDDQNTSRVQ--PAGIFSFQSLS----EGTHLEPPHIHGSS-- 300

BLAST of MS008278 vs. NCBI nr
Match: XP_022981016.1 (mucin-5AC-like [Cucurbita maxima])

HSP 1 Score: 217.6 bits (553), Expect = 1.6e-52
Identity = 169/328 (51.52%), Postives = 194/328 (59.15%), Query Frame = 0

Query: 1   MDSGSGSLQSSSGGDEEYDS-------------AHQPPLIPPPPSFSFHNIIPPSHIGSS 60
           MDSGSGSLQSSSGGD++YDS               QP L PPPP   F N   P H    
Sbjct: 1   MDSGSGSLQSSSGGDDDYDSHRRRHHHYHHQEQQQQPHLFPPPPPPLFFNATMPPH---Q 60

Query: 61  IIPPQIPFHNFQNLPPIFYDFSSNYSNLQP-HFNPD-ANSFPNLDP----PLRPTSQPTA 120
            +P  +  HNFQNL    YDF SN+ NLQP +FNPD +NSF NLD     P    S+PT 
Sbjct: 61  PLPFHLSHHNFQNL----YDFPSNF-NLQPTNFNPDSSNSFLNLDDDRPNPTSLRSEPTT 120

Query: 121 --------AAVSPPTQNQPPVRGGPSSAPAGLHPKVSTKKRTRASRRAPTTVLTTDTSNF 180
                   +A       Q P R   + +P GLHPK +TKKRTRASRRAPTTVLTTDT+NF
Sbjct: 121 TTTFKTPISAEGSTHHTQIPNR-STNPSPTGLHPKPTTKKRTRASRRAPTTVLTTDTTNF 180

Query: 181 RAMVQEFTGIPSPPFSAGG------SSYSRRFDLFTS---RTTAGTNLEPSGSGGFYPSR 240
           RAMVQEFTGIPSPPF+A G      SS+SRRFDLF S    TT  TNLEPSGS GF+PSR
Sbjct: 181 RAMVQEFTGIPSPPFTAPGSSSSSSSSFSRRFDLFASVRANTTTTTNLEPSGS-GFHPSR 240

Query: 241 SKAQQVSPL----LNNVMVERETMSNMQQTPGGIFSLQSLSGHDFNSTNVEAGQSHSHSH 289
           SK Q  S L     NNV ++ +  S +Q  P GIFS QS+S      T++E  Q H  S 
Sbjct: 241 SKVQLFSSLNNTNNNNVTIDDQNTSRVQ--PAGIFSFQSVS----EGTHLEPPQIHGSS- 300

BLAST of MS008278 vs. NCBI nr
Match: KAG7031711.1 (hypothetical protein SDJN02_05752, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 215.3 bits (547), Expect = 7.8e-52
Identity = 171/333 (51.35%), Postives = 195/333 (58.56%), Query Frame = 0

Query: 1   MDSGSGSLQSSSGGDEEYDSAH---------QPPLIPPPPSFSFHN--IIPPSHIGSSII 60
           MDSGSGSLQSSSGGD++YDS H         QP L PPPP   F N  I PPSH     +
Sbjct: 1   MDSGSGSLQSSSGGDDDYDSHHHHHHHQQQQQPHLFPPPPPPLFFNATIPPPSH---QPL 60

Query: 61  PPQIPFHNFQNLPPIFYDFSSNYSNLQP-HFNPD-ANSFPNLDP----PLRPTSQPT--- 120
           P  +  HNFQNL    YDF SN+ NLQP +FN D +NSF NLD     P    S+PT   
Sbjct: 61  PFHLSPHNFQNL----YDFPSNF-NLQPTNFNQDSSNSFLNLDDVRPNPTSLRSEPTTTT 120

Query: 121 -------AAAVSPPTQNQPPVRGGPSSAPAGLHPKVSTKKRTRASRRAPTTVLTTDTSNF 180
                   AA       Q P R   + +P  LHPK +TKKRTRASRRAPTTVLTTDT+NF
Sbjct: 121 TTTFKTPTAAEGSTHHTQIPNR-STNPSPTALHPKPTTKKRTRASRRAPTTVLTTDTTNF 180

Query: 181 RAMVQEFTGIPSPPFSAGG------SSYSRRFDLFTSRTTAGTNLEPSGSG---GFYPSR 240
           RAMVQEFTGIPSPPF+A G      SS+SRRFDLF S     TN+E SGSG   GF+PSR
Sbjct: 181 RAMVQEFTGIPSPPFTAPGSSSSSSSSFSRRFDLFASVRATTTNIEASGSGSGSGFHPSR 240

Query: 241 SKAQQVSPL---LNNVMVERETMSNMQQTPGGIFSLQSLSGHDFNSTNVEAGQSHSHSHI 291
           SK Q  S L    NNV ++ +  S +Q  P GIFS QSLS      T++E    H  S  
Sbjct: 241 SKVQLFSSLNNNNNNVTIDDQNTSRVQ--PAGIFSFQSLS----EGTHLEPPHIHGSS-- 300

BLAST of MS008278 vs. NCBI nr
Match: XP_023524775.1 (probable serine/threonine-protein kinase MARK-A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 214.2 bits (544), Expect = 1.7e-51
Identity = 170/336 (50.60%), Postives = 191/336 (56.85%), Query Frame = 0

Query: 1   MDSGSGSLQSSSGGDEEYDSAH------------QPPLI--PPPPSFSFHNIIPPSHIGS 60
           MDSGSGSLQSSSGGD++YDS H            QP L   PPPP F    I PP H   
Sbjct: 1   MDSGSGSLQSSSGGDDDYDSHHHHHNHHHHQQQQQPHLFSPPPPPLFFNATIPPPPH--- 60

Query: 61  SIIPPQIPFHNFQNLPPIFYDFSSNYSNLQP-HFNPD-ANSFPNLDP----PLRPTSQPT 120
             +P  +  HNFQNL    YDF SN+ NLQP +FNPD +NSF NLD     P      PT
Sbjct: 61  QPLPFHLSPHNFQNL----YDFPSNF-NLQPTNFNPDSSNSFLNLDDVRPNPTTTFKTPT 120

Query: 121 AAAVSPPTQNQPPVRGGPSSAPAGLHPKVSTKKRTRASRRAPTTVLTTDTSNFRAMVQEF 180
           AA  S      P     PS  P GLHPK +TKKRTRASRRAPTTVLTTDT+NFRAMVQEF
Sbjct: 121 AAEGSTHHTQIPNRSTNPS--PTGLHPKPTTKKRTRASRRAPTTVLTTDTTNFRAMVQEF 180

Query: 181 TGIPSPPFSAGG------SSYSRRFDLFTSRTTAGTNLEPSGSG-----GFYPSRSKAQQ 240
           TGIPSPPF+A G      SS+SRRFDLF S     TN+E SGSG     GF+PSRSK Q 
Sbjct: 181 TGIPSPPFTAPGSSSSSSSSFSRRFDLFASVRATTTNIEASGSGSGSGSGFHPSRSKVQL 240

Query: 241 VSPL-------LNNVMVERETMSNMQQTPGGIFSLQSLSGHDFNSTNVEAGQSHSHSHID 291
            S L        NNV ++ +  S +   P GIFS QSLS      T++E    H  S   
Sbjct: 241 FSSLNNNNSNNNNNVTIDNQNTSRVH--PAGIFSFQSLS----EGTHLEPPHIHGSS--- 300

BLAST of MS008278 vs. ExPASy Swiss-Prot
Match: Q9LIE6 (VQ motif-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=VQ22 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.0e-06
Identity = 63/192 (32.81%), Postives = 92/192 (47.92%), Query Frame = 0

Query: 80  NPDA-NSFPNLDPPLRPTSQPTAAAVSPPTQNQPPVRGGPSSAPAGLHPKVS-----TKK 139
           NP+  + F N +     TS   + AV+  T       G  +S  + L P+       T++
Sbjct: 3   NPNEWSQFYNNNQTFFTTSTTASTAVTTTT------AGDTTSIDSRLSPETGRVTKPTRR 62

Query: 140 RTRASRRAPTTVLTTDTSNFRAMVQEFTGIPSPPFSAGGSSYSRRFDLFTSRTTAGTNLE 199
           R+RASRR PTT+L TDTSNFRAMVQ++TG PS      G++ S      +S  +AG++ +
Sbjct: 63  RSRASRRTPTTLLNTDTSNFRAMVQQYTGGPSAMAFGSGNTTSAFSLTSSSDPSAGSSQQ 122

Query: 200 PSGSGGFYPSRSKAQQVSPL---LNNV--MVERETMSNMQQTPGGIFSLQSLSGHDFNS- 259
                 F P         P    LNNV  +V    M+N      G+F     SG   ++ 
Sbjct: 123 APWQYNFQPHAPLQPPQRPYMFSLNNVNPVVGYSNMNNPNTMVSGVFGTVDGSGGGGSAP 182

BLAST of MS008278 vs. ExPASy TrEMBL
Match: A0A6J1IVA8 (mucin-5AC-like OS=Cucurbita maxima OX=3661 GN=LOC111480291 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 7.6e-53
Identity = 169/328 (51.52%), Postives = 194/328 (59.15%), Query Frame = 0

Query: 1   MDSGSGSLQSSSGGDEEYDS-------------AHQPPLIPPPPSFSFHNIIPPSHIGSS 60
           MDSGSGSLQSSSGGD++YDS               QP L PPPP   F N   P H    
Sbjct: 1   MDSGSGSLQSSSGGDDDYDSHRRRHHHYHHQEQQQQPHLFPPPPPPLFFNATMPPH---Q 60

Query: 61  IIPPQIPFHNFQNLPPIFYDFSSNYSNLQP-HFNPD-ANSFPNLDP----PLRPTSQPTA 120
            +P  +  HNFQNL    YDF SN+ NLQP +FNPD +NSF NLD     P    S+PT 
Sbjct: 61  PLPFHLSHHNFQNL----YDFPSNF-NLQPTNFNPDSSNSFLNLDDDRPNPTSLRSEPTT 120

Query: 121 --------AAVSPPTQNQPPVRGGPSSAPAGLHPKVSTKKRTRASRRAPTTVLTTDTSNF 180
                   +A       Q P R   + +P GLHPK +TKKRTRASRRAPTTVLTTDT+NF
Sbjct: 121 TTTFKTPISAEGSTHHTQIPNR-STNPSPTGLHPKPTTKKRTRASRRAPTTVLTTDTTNF 180

Query: 181 RAMVQEFTGIPSPPFSAGG------SSYSRRFDLFTS---RTTAGTNLEPSGSGGFYPSR 240
           RAMVQEFTGIPSPPF+A G      SS+SRRFDLF S    TT  TNLEPSGS GF+PSR
Sbjct: 181 RAMVQEFTGIPSPPFTAPGSSSSSSSSFSRRFDLFASVRANTTTTTNLEPSGS-GFHPSR 240

Query: 241 SKAQQVSPL----LNNVMVERETMSNMQQTPGGIFSLQSLSGHDFNSTNVEAGQSHSHSH 289
           SK Q  S L     NNV ++ +  S +Q  P GIFS QS+S      T++E  Q H  S 
Sbjct: 241 SKVQLFSSLNNTNNNNVTIDDQNTSRVQ--PAGIFSFQSVS----EGTHLEPPQIHGSS- 300

BLAST of MS008278 vs. ExPASy TrEMBL
Match: A0A6J1FJ60 (mucin-5AC-like OS=Cucurbita moschata OX=3662 GN=LOC111445950 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 1.8e-49
Identity = 169/343 (49.27%), Postives = 195/343 (56.85%), Query Frame = 0

Query: 1   MDSGSGSLQSSSGGDEEYDSAH---------------QPPLIPPPPSFSFHN--IIPPSH 60
           MDSGSGSLQSSSGGD++YDS H               QP L PPPP   F N  I PPSH
Sbjct: 1   MDSGSGSLQSSSGGDDDYDSHHHHHNHHNHHHHQQQQQPHLFPPPPPPLFFNATIPPPSH 60

Query: 61  IGSSIIPPQIPFHNFQNLPPIFYDFSSNYSNLQP-HFNPD-ANSFPNLDP----PLRPTS 120
                +P  +  HNFQNL    YDF SN+ NLQP +FN D +NSF NLD     P    S
Sbjct: 61  ---QPLPFHLSPHNFQNL----YDFPSNF-NLQPTNFNQDSSNSFLNLDDVRPNPTSLRS 120

Query: 121 QPT----------AAAVSPPTQNQPPVRGGPSSAPAGLHPKVSTKKRTRASRRAPTTVLT 180
           +PT           AA       Q P R   + +P  LHPK +TKKRTRASRRAPTTVLT
Sbjct: 121 EPTTTTTTTFKTPTAAEGSTHHTQIPNR-STNPSPTALHPKPTTKKRTRASRRAPTTVLT 180

Query: 181 TDTSNFRAMVQEFTGIPSPPFSAGG------SSYSRRFDLFTSRTTAGTNLEPSGSG--- 240
           TDT+NFRAMVQEFTGIPSPPF+A G      SS+SRRFDLF S     TN+E SGSG   
Sbjct: 181 TDTTNFRAMVQEFTGIPSPPFTAPGSSSSSSSSFSRRFDLFASVRATTTNIEASGSGSGS 240

Query: 241 GFYPSRSKAQQVSPLLNNVMVERETMSNMQQTPGGIFSLQSLSGHDFNSTNVEAGQSHSH 300
           GF+PSRSK Q  S L NN  V  +  +  +  P  IFS QSLS      T++E    H  
Sbjct: 241 GFHPSRSKVQLFSSLNNNNNVTIDDQNTSRVQPAEIFSFQSLS----EGTHLEPPHIHGS 300

Query: 301 SHIDGSGQLLSALQNDEIWKRGRPNNNNTANCNQNGNDGGAAD 302
           S    S +LLSALQNDE W+     +N+TA        G  A+
Sbjct: 301 S---TSQELLSALQNDEAWR-----SNSTATTTATTTIGTTAN 322

BLAST of MS008278 vs. ExPASy TrEMBL
Match: A0A1S4E5L0 (anaphase-promoting complex subunit cdh1-like OS=Cucumis melo OX=3656 GN=LOC103503584 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 8.7e-49
Identity = 172/364 (47.25%), Postives = 199/364 (54.67%), Query Frame = 0

Query: 1   MDSGSGSLQSSSGGDEEYDSAH-----------QPPLIPPPPSFSFHNIIPPSH------ 60
           MDSGSGSLQSSSGGDEEYDS H           Q P +  PPS  F N+   S       
Sbjct: 1   MDSGSGSLQSSSGGDEEYDSHHHHHHHHQQQQQQQPQLVFPPSPLFFNLPSSSSSSSSCS 60

Query: 61  ------IGSSIIP---PQIP-FHNFQN-------LPPIFYDF-SSNYSNLQPHFNPD--A 120
                   SS IP     +P FHN+QN       L P FYDF SSNY     +FNPD  +
Sbjct: 61  SSSLLACSSSSIPHHQQSLPNFHNYQNNNNHHHHLLPSFYDFPSSNY-----NFNPDSSS 120

Query: 121 NSFPNLDPPLRPTSQPTAAAVSP--PTQNQPPV-RGGPSSAPAGLHPKVSTKKRTRASRR 180
           NSF NLD  +  + +PT     P   TQNQ P  R  PS++   LHPKV+TKKRTRASRR
Sbjct: 121 NSFVNLD--VLRSGEPTHFRNPPDGSTQNQIPTNRSTPSTSSGALHPKVTTKKRTRASRR 180

Query: 181 APTTVLTTDTSNFRAMVQEFTGIPSPPFSAGGSSYSRRFDLF-----TSRTTAGTNLEPS 240
           APTTVLTTDT+NFRAMVQEFTGIPSPPF++GGSSYSRRFDLF     TS  +  T LE S
Sbjct: 181 APTTVLTTDTTNFRAMVQEFTGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDS 240

Query: 241 GSG-GFYPSRSKAQQVSPLLNNVMVERETMSNMQQTPGGIFSLQSL-SGHDFNSTN--VE 300
           G G G YPSRSK   V                     GG+FS QS+ SGHDFNS +  V 
Sbjct: 241 GLGVGSYPSRSKDDNVG-------------------VGGVFSFQSVSSGHDFNSNSKQVR 300

Query: 301 AGQSHSHSHIDGSGQLLSALQNDEIWKRGRPNNNN--------------TANCNQNGNDG 302
                 H+ + GS +L   +QNDE W+  R  +                TAN N N N+ 
Sbjct: 301 ENLEMDHNVVHGSNRL---VQNDETWRSNRGGSTTAATATATAATAATVTANSNNNNNNN 335

BLAST of MS008278 vs. ExPASy TrEMBL
Match: A0A5D3E5M3 (Anaphase-promoting complex subunit cdh1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004870 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.1e-46
Identity = 158/316 (50.00%), Postives = 180/316 (56.96%), Query Frame = 0

Query: 1   MDSGSGSLQSSSGGDEEYDSAH-----------QPPLIPPPPSFSFHNIIPPSH------ 60
           MDSGSGSLQSSSGGDEEYDS H           Q P +  PPS  F N+   S       
Sbjct: 1   MDSGSGSLQSSSGGDEEYDSHHHHHHHHQQQQQQQPQLVFPPSPLFFNLPSSSSSSSSCS 60

Query: 61  ------IGSSIIP---PQIP-FHNFQN-------LPPIFYDF-SSNYSNLQPHFNPD--A 120
                   SS IP     +P FHN+QN       L P FYDF SSNY     +FNPD  +
Sbjct: 61  SSSLLACSSSSIPHHQQSLPNFHNYQNNNNHHHHLLPSFYDFPSSNY-----NFNPDSSS 120

Query: 121 NSFPNLDPPLRPTSQPTAAAVSP--PTQNQPPV-RGGPSSAPAGLHPKVSTKKRTRASRR 180
           NSF NLD  +  + +PT     P   TQNQ P  R  PS++   LHPKV+TKKRTRASRR
Sbjct: 121 NSFVNLD--VLRSGEPTHFRNPPDGSTQNQIPTNRSTPSTSSGALHPKVTTKKRTRASRR 180

Query: 181 APTTVLTTDTSNFRAMVQEFTGIPSPPFSAGGSSYSRRFDLF-----TSRTTAGTNLEPS 240
           APTTVLTTDT+NFRAMVQEFTGIPSPPF++GGSSYSRRFDLF     TS  +  T LE S
Sbjct: 181 APTTVLTTDTTNFRAMVQEFTGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDS 240

Query: 241 GSG-GFYPSRSKAQQVSPLLNNVMVERETMSNMQQTPGGIFSLQSL-SGHDFNSTN--VE 268
           G G G YPSRSK   V                     GG+FS QS+ SGHDFNS +  V 
Sbjct: 241 GLGVGSYPSRSKDDNVG-------------------VGGVFSFQSVSSGHDFNSNSKQVR 290

BLAST of MS008278 vs. ExPASy TrEMBL
Match: A0A0A0LJY7 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G895870 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.4e-45
Identity = 139/243 (57.20%), Postives = 157/243 (64.61%), Query Frame = 0

Query: 1   MDSGSGSLQSSSGGDEEYDSAH--QPPLIPPP-------PSFSFHNIIPPSHIGSSIIPP 60
           MDSGSGSLQSSSGGDEEYDS H  QP L+ PP       PS S  +    S + +S    
Sbjct: 1   MDSGSGSLQSSSGGDEEYDSHHHQQPQLVFPPSPLFFNLPSSSSSSSCSSSSLLASSSSS 60

Query: 61  QIP--------FHNFQN---LPPIFYDF--SSNYSNLQPHFNPD--ANSFPNLDPPLRPT 120
            IP        FHN+QN   L P FYDF  SSNY     +FNPD  +NSF NLD  +  +
Sbjct: 61  SIPHHQQSLPSFHNYQNNHHLLPSFYDFPASSNY-----NFNPDSSSNSFVNLD--VLRS 120

Query: 121 SQPTAAAVSP--PTQNQ-PPVRGGPSSAPAGLHPKVSTKKRTRASRRAPTTVLTTDTSNF 180
            +PT     P   TQNQ P +R  PS++   LHPKV+TKKRTRASRRAPTTVLTTDT+NF
Sbjct: 121 GEPTHFKTPPDGSTQNQIPTIRSTPSTSSGALHPKVNTKKRTRASRRAPTTVLTTDTTNF 180

Query: 181 RAMVQEFTGIPSPPFSAGGSSYSRRFDLF-----TSRTTAGTNLEPSGSG-GFYPSRSKA 211
           RAMVQEFTGIPSPPF++GGSSYSRRFDLF     TS  +  T LE SG G G YPSRSK 
Sbjct: 181 RAMVQEFTGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGSYPSRSKD 236

BLAST of MS008278 vs. TAIR 10
Match: AT4G39720.1 (VQ motif-containing protein )

HSP 1 Score: 86.7 bits (213), Expect = 3.9e-17
Identity = 106/316 (33.54%), Postives = 152/316 (48.10%), Query Frame = 0

Query: 1   MDSG-SGSLQSSS----GGDEEYDSAHQPPLIPPPPSFSFHNIIPPSHIGSSIIPPQIPF 60
           M+SG S S+QSSS    GG+EEYDS      I     F  HN    +H+ SSI  PQ   
Sbjct: 1   MESGNSSSMQSSSGGGGGGEEEYDSRAADQSI--SAFFDHHN----NHV-SSIPTPQ--- 60

Query: 61  HNFQNLPPIFYDFSSNYSNLQPHFNPDANSFP-NLDP-PLRPTSQPTAAAVS--PPTQNQ 120
            N +NL  + +D ++N S + P++  +    P N  P P+      T++A S  PPT N 
Sbjct: 61  QNHRNL--LHFDHNNNNSLIPPNYFNNNTFLPVNQQPDPISQLDLRTSSATSSLPPTNNI 120

Query: 121 PPVRGGPSSAPAGLHPKVSTKKRTRASRRAPTTVLTTDTSNFRAMVQEFTGIPSPP-FSA 180
             ++               TKKR+RASRRAPTTVLTTDTSNFRAMVQEFTGIP+PP F+ 
Sbjct: 121 GVIK--------------KTKKRSRASRRAPTTVLTTDTSNFRAMVQEFTGIPAPPLFNN 180

Query: 181 GGSSYSRRFDLFTSRTTAGTNLEPSGSGGFYPSRSKAQQVSPLLNNVMVERETMSNMQQT 240
                + R + F   +++  N   + +    P   K    +PLL+   +++       Q 
Sbjct: 181 NSIVNTTRLNTFLGLSSSSPNTYNTNNLLLRPFAQKLTPATPLLSGSQIQQ------YQN 240

Query: 241 PGGIFSLQSLSGHDFNSTNVEAGQSHSHSHIDGSGQLLSALQNDEIWKRGRPNNNNTANC 300
           P   F   +L        ++   +S+ H    G G + +   N          N NT + 
Sbjct: 241 PNNGFEDMNLQA--LLQAHISNPRSNEHDQF-GLGMMQTPSTNPPTTTAAANGNINTGD- 278

Query: 301 NQNGNDGGAADDFNDD 307
             NG+ GG+  + N+D
Sbjct: 301 --NGSYGGSDHEHNND 278

BLAST of MS008278 vs. TAIR 10
Match: AT1G35830.1 (VQ motif-containing protein )

HSP 1 Score: 83.6 bits (205), Expect = 3.3e-16
Identity = 100/304 (32.89%), Postives = 131/304 (43.09%), Query Frame = 0

Query: 1   MDS-GSGSLQSSS--------GGDEEYDSAHQPPLIPPPPSFSFHNIIPPSHIGSSIIPP 60
           MDS  SGSLQSSS        G  +++ S   PP  PPP S +++    P+ + SS    
Sbjct: 1   MDSCNSGSLQSSSDDHESSSTGAPQDHSSFFLPPFQPPPSSSTYYG--DPTTLSSS-SSS 60

Query: 61  QIPFHNFQNLPPIFYDFSSNYSNLQPHFNPDANSFPNLDPPLRPTSQPTAAAVSPPTQNQ 120
              + NF N   +  D   N ++L P         P   PP  P          PP+ ++
Sbjct: 61  SATYLNFVN--NLISDDILNQTHLLP---------PQPPPPPPP---------PPPSSSR 120

Query: 121 PPVRGGPSSAPAGLHPKVSTKKRTRASRRAPTTVLTTDTSNFRAMVQEFTGIPSPPFSAG 180
            P                  +KRTRASRRAPTTVLTTDTSNFRAMVQEFTG+P+ PFS  
Sbjct: 121 NP------------------RKRTRASRRAPTTVLTTDTSNFRAMVQEFTGVPASPFSHP 180

Query: 181 GSSYSRRFDLFTSRTTAGT--NLEPSGSGGFYPSRSKAQQVS--------------PLLN 240
            SS +RRFD+F S +   T     P       PS S    +               P  +
Sbjct: 181 FSSTTRRFDIFRSPSDPLTYNPFRPIPQKPLNPSTSSLLNLHHHTTTSMTFPDLPLPQTH 240

Query: 241 NVMVERETMSNMQQTPGGIFSLQSLSGHDFNSTNVEAGQSHSHSHIDGSGQLLSALQNDE 280
            V   +  +S+       + SL     HD +S N+ A Q + H   D     L   Q  E
Sbjct: 241 QVSTFQSLLSHQHHHQPTLSSL-----HDLDSMNLGALQQNHHPTADDDNHQLMMRQFSE 258

BLAST of MS008278 vs. TAIR 10
Match: AT5G65170.1 (VQ motif-containing protein )

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-12
Identity = 76/207 (36.71%), Postives = 104/207 (50.24%), Query Frame = 0

Query: 1   MDSG-SGSLQSSSGG-----DEEYDSAHQPPLIPPPPSFSFHNIIPPSHIGSSIIPPQIP 60
           M+SG S S+QSSSGG      EEYDS      I    + + +N  P +   +  +P Q+ 
Sbjct: 1   MESGNSSSMQSSSGGGGGGDQEEYDS-RADQSISALFNHNNNNNNPTTVSPNIAVPTQLD 60

Query: 61  FHNFQNLPPIFYDFSSNYSNLQPHFNPDANSFPNLDPPLRPTSQPTAAAVS--------- 120
                    I   F++++S   P ++  A    +   P+ P         +         
Sbjct: 61  -------ALIANYFNTSWSADNPLWSTTATQPTDGSRPVPPPISSEQVFFTNPLQQNLRT 120

Query: 121 -PPTQNQPPVRGGPSSAPAGLHPKVSTKKRTRASRRAPTTVLTTDTSNFRAMVQEFTGIP 180
            P T    P+   P+    GL    + KKR+R SRRAPTTVLTTDTSNFRAMVQEFTG P
Sbjct: 121 VPNTNTTSPICSVPTDKKNGLATTRNPKKRSRVSRRAPTTVLTTDTSNFRAMVQEFTGNP 180

Query: 181 SPPFSAGGSSYSR-RFDLFTSRTTAGT 191
           S PF+   SS+ R RFDLF S +++ +
Sbjct: 181 STPFTGLSSSFPRSRFDLFGSSSSSSS 199

BLAST of MS008278 vs. TAIR 10
Match: AT4G15120.1 (VQ motif-containing protein )

HSP 1 Score: 63.2 bits (152), Expect = 4.6e-10
Identity = 37/64 (57.81%), Postives = 45/64 (70.31%), Query Frame = 0

Query: 131 TKKRTRASRRAPTTVLTTDTSNFRAMVQEFTGIPSPPFSAGGSSYSRRFDLFTSRTTAGT 190
           T++R+RASRR PTT+  TDT+NFRAMVQ+FTG PS    A GSS S  F L +S  TAG 
Sbjct: 50  TRRRSRASRRTPTTLFNTDTANFRAMVQQFTGGPSA--VAFGSSPSSGFSLTSSDPTAGV 109

Query: 191 NLEP 195
           +  P
Sbjct: 110 SSSP 111

BLAST of MS008278 vs. TAIR 10
Match: AT3G22160.1 (VQ motif-containing protein )

HSP 1 Score: 54.3 bits (129), Expect = 2.1e-07
Identity = 63/192 (32.81%), Postives = 92/192 (47.92%), Query Frame = 0

Query: 80  NPDA-NSFPNLDPPLRPTSQPTAAAVSPPTQNQPPVRGGPSSAPAGLHPKVS-----TKK 139
           NP+  + F N +     TS   + AV+  T       G  +S  + L P+       T++
Sbjct: 3   NPNEWSQFYNNNQTFFTTSTTASTAVTTTT------AGDTTSIDSRLSPETGRVTKPTRR 62

Query: 140 RTRASRRAPTTVLTTDTSNFRAMVQEFTGIPSPPFSAGGSSYSRRFDLFTSRTTAGTNLE 199
           R+RASRR PTT+L TDTSNFRAMVQ++TG PS      G++ S      +S  +AG++ +
Sbjct: 63  RSRASRRTPTTLLNTDTSNFRAMVQQYTGGPSAMAFGSGNTTSAFSLTSSSDPSAGSSQQ 122

Query: 200 PSGSGGFYPSRSKAQQVSPL---LNNV--MVERETMSNMQQTPGGIFSLQSLSGHDFNS- 259
                 F P         P    LNNV  +V    M+N      G+F     SG   ++ 
Sbjct: 123 APWQYNFQPHAPLQPPQRPYMFSLNNVNPVVGYSNMNNPNTMVSGVFGTVDGSGGGGSAP 182

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038898813.11.2e-5754.94uncharacterized serine-rich protein C215.13-like [Benincasa hispida][more]
KAG6608078.15.4e-5351.99hypothetical protein SDJN03_01420, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022981016.11.6e-5251.52mucin-5AC-like [Cucurbita maxima][more]
KAG7031711.17.8e-5251.35hypothetical protein SDJN02_05752, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023524775.11.7e-5150.60probable serine/threonine-protein kinase MARK-A [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q9LIE63.0e-0632.81VQ motif-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=VQ22 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1IVA87.6e-5351.52mucin-5AC-like OS=Cucurbita maxima OX=3661 GN=LOC111480291 PE=4 SV=1[more]
A0A6J1FJ601.8e-4949.27mucin-5AC-like OS=Cucurbita moschata OX=3662 GN=LOC111445950 PE=4 SV=1[more]
A0A1S4E5L08.7e-4947.25anaphase-promoting complex subunit cdh1-like OS=Cucumis melo OX=3656 GN=LOC10350... [more]
A0A5D3E5M33.1e-4650.00Anaphase-promoting complex subunit cdh1-like OS=Cucumis melo var. makuwa OX=1194... [more]
A0A0A0LJY73.4e-4557.20VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G895870 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
AT4G39720.13.9e-1733.54VQ motif-containing protein [more]
AT1G35830.13.3e-1632.89VQ motif-containing protein [more]
AT5G65170.11.3e-1236.71VQ motif-containing protein [more]
AT4G15120.14.6e-1057.81VQ motif-containing protein [more]
AT3G22160.12.1e-0732.81VQ motif-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008889VQPFAMPF05678VQcoord: 140..167
e-value: 2.3E-13
score: 49.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 306..320
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 278..298
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 278..328
NoneNo IPR availablePANTHERPTHR33179:SF4VQ MOTIF-CONTAINING PROTEINcoord: 1..295
IPR039609VQ motif-containing protein 15/22PANTHERPTHR33179VQ MOTIF-CONTAINING PROTEINcoord: 1..295

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS008278.1MS008278.1mRNA