MS008218 (gene) Bitter gourd (TR) v1

Overview


Name	MS008218
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	DEAD-box ATP-dependent RNA helicase 46
Location	scaffold45: 302573 .. 308168 (+)
RNA-Seq Expression	MS008218
Synteny	MS008218

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATTTGAAATACATTTTGAAGCCATGGAGACTGGGGAGTCTGCTCCCCCTTCCCTCGGTCCTCGTTATGCACCCGACGATCCTACTCTTCCCAAGCCTTGGAAGGGGTTGATCGATGGGAGCACTGGACTATTATACTACTGGAACCCTGAAACCAACGTCACTCAGTATGAGAAACCAGTCTCTTTGCCACCACCACTGCCACTCGGTCCTCATCCTAGTGCCTCTACTTCCAAGCCTGCTTCAATTCCGGAGGCTCATTCCATGCCAACAAATGGCACATTAACGCCTCACGGGCAGCCAAACCATCATGTCCCTCAACAAGAAGGCCAATCAAACAGCCAGCTTTCTCAACAACCTGGACATTTAATATCACAGCAACACAGTTCTGTTACAGGGCAGGTAAATGTTAATCACCATCCTGGTATGCAAATGGCACCGGATGGGCGTCAACATAGTGCGCAACCGAATCAGGTCATGCAGCAACCAGGGATGTTTGCAATGTCATCACAACATCTTGGCCAGCAGCATGTCATGCAACAAGGTCAGAAAATGGCCCATACGAATCAACAAATGGCTCAGCATCCTCCTAACCAGCAAGTCTTGCAGAATCCAGGACAACAAATACCACAGCCATCAATCCAGAATATAGGACAGCCGAACATGCAAAATCAAACCCCATTAGTTGGCCAGCCTCAAGGTCCGCAATATGGTCAGCAGCAGCTTCAGTATATGGGTTACCAGCAAAGCGTACATCCAAGTGTTCAGCAAAATTCACAGCAGCAAGTTAAACAAAGCCCTTTAGGTCAACCATTTGTTAATCACCTCGAACAGAAGTCGGGTTTTCTGAACAGAGAGGAGGATAACCTTCAGTCAGGAAACCAAGTTGGATTTTCTTCTTCTCAGTTTCAACAAAGTGGTGGTACCTCATCTATTCATAACCTTCATCCTGGAACCAATTCTTCTCAAATGCAACAGTTTGGTTTAGCTACAGATCAAGCACGACATTTTGGTGGCTCTCCAGGAAACATGCAACAGCAGCATTCTGTGGTTCAGTTGCAGCATGCAGGTACTGAATTGACTCATCGCCAACATCATTCTAGATTCCAAGATCAAATGGGCCCAGCTGTGATGCAGGGGCAGCAAGCTGGTGCTGAAAATTTGCCTGGCAGAGCTGGAAATGAATTTTACTTTGGCAGGAATGAGGGGCCTGGCACTGGTCCACATCAACCAAGGCTTGCAGCCATACCAATGGCAAGGAGCCAGCAGGTTTTATTTTTTCTATTATATATATATAGATCACGTTCCTTTGGAATTCTTTCATGTTCAAGTTTTTGGACACTATTTAAGTAAGATACAAATACGAGGGATGAATTTTTACTACGACTGGAAACTTTATATTTTTGTCATATCTTAAATTTGGTGCATGTTAAAAGAATTTGAATGGGCACTGATATTATGGGAAGACATTATATCTTTGGGTCTAACATAGAAGATATGTAGTTAGGTACTGTAAAGTTTTATGAGGGAAGTTATGTGTGGAATTGGATTAATAAAGTAATAAATAGGAAGTGATGTGTTATCTACTCTTTTCCTCGACCATAAACTTAGTTTTTAAGTTAAAAGAGTAATGCGGTACTAATTTTCCATGTATTTCAGTTATCTATGATCTACTTTTTCATACATCATGTGCAAATTGTCCTGTCTTTCAGGAAACAAGGATGGGTGGTGTTCCATTTCCAAGTGTGGCACCTGGTCATCCTAGTGGGACAAATTTTGCGGCTGGGCACTCACATAGCATGTATAGCCATGGATCTGGTGGTCCATCATTGCCAAATAATGCTCTGATAGGCCCTCCTCATGTTGGAGCATCAGATGTTACTAATATGTCGCCTGTTGAAGTTTATCGTCAACAGCATGAAGTAACTGCTACGGTTTGTATTTCACCACGCCTATCTTTTTTCATTGTGTTGTGGTGAATGCTATAGGGCGATGTAAACGTACAATTGATTACCAATCATACTGTCAATGTTCTGTGGGAAAATCAGTGTTAAATTGTCGAGCTTATATAGTTCAATGAAGGTTGATACATACACGATTGGAAATTTAATTTGTGTGACTGCATGGAGTCTCGACTGTGACTTTGTTTCATTAGATGTGCGCTGTTGCTTCAATCTATAGCAGTGAAACTACTCTTTTTTTTTGTGTAAATGATTAGTCCAATTAACTTTGTAGGGTGACAATGTTCCAGCTCCTTTCATGACATTTGAGGCTACTGGCTTCCCTCCAGAGCTACTGAGAGAGGCAAGTTTTATGTTTGATCAAAATTCTTTCAATTGGGTAACGTGAAAAAAGAAAGTGATCCAGCTTACTCATTTCTTCTGTTATTAATATAGTTTTTACTCATGAGTTTTCACTTGTCGCAGGTGCGATATCTGCTCCGGAGGAGGAGCATATGTCGTACGCTGCACTGCTATTGCTACACTTGCACATGCAACAACCCCTTGATTTTTGGAGGCTGCAAAATGGATGGTTGGAGCCTCTCTAGGGCATCTTTTAGTAGAGTGTTGGCCATTTGACCAGATCACACCTGATGTGACTGAGATGTCTTGCTTATTGGCTCTGCTTATTATGTCTTTATTGCCATCTTTTGTTGCCTCGAGTTGCTTCTGTAAGCAACTAATCTATGGGTTTTCTTGTGCTATTTCTATTTGCTCTTGTAGAACACTGTATTTTTATAATGTATTTCACGCATGTATGTCTTTGGCATGTTTTAAACTTACCTTGGCGCTGAGTCTATATTTCCATTTATATGCCGCAGATATATTCTGCTGGATTCTCATCTCCTACGCCAATTCAAGCACAAACATGGCCCATTGCCCTGCAAGGTAGGGACATAGTCGCAATAGCTAAAACGGGGTCTGGAAAAACTTTGGGCTATTTGATTCCCGCCTTCATTCTTCTTAGGCAGTGCCGAAATAATCCACAGAATGGGCCAACGGTGTTGGTTTTGGCTCCTACTAGGGAGCTTGCTACTCAAATACAAGATGAGGCAATTAAATTTGGGAGGTCTTCCAGGGTCTGTTGTACGGTGAGTTTCAAATATTTCCTCTTTTGAATCCTTGAATCATCTACTCATGCTTCCTTTTCTTATGATTTAGTTTGTTCTTTTTCCCACTTCATGAGTTAAAGTTCTTCATTGTTTCAGTGCTTGTATGGTGGAGCTCCAAAAGGTCCTCAGCTGAAAGAATTAGATCGTGGTGCTGATATTGTCGTGGCAACTCCTGGCCGGCTTAATGATATACTAGAAATGAAGATGATCAACTTTAGGCAAGTCTCACTTCTTGTACTTGATGAAGCTGATCGGATGCTTGACATGGGATTTGAACCTCAAATTCGGAAGATTGTGAATGAAATACCACCACGCAGACAAACTCTTATGTATACAGCAACCTGGCCCAAGGAAGTAAGAAAAATCGCGAATGATCTTCTCGTCAACTCTGTCCAGGTGAATATTGGTAGCGTTGATGAACTTGCTGCTAACAAGGCTATCACACAGGTAATTTCAACAAATTATATGCTTACCAGTCCCTGTCTACGTTTCAATTTGGCATTATGAGTCTCACAAATTGTTAAAATGATACCTTTTTAGCCCACATGGTCGGTGTCATAATGTGGTCAACAAAGTAATTTGCTTTTAAAATTTGATTGCTTTTTTGTTCGTATTTCGTAATGGAAATGAATCTTTTGAACACTAGAGTTACACAAGATTGAATAGCTGAAGTCTGTGGAAACGTTAACTTCTTTCTTTTTCTAGTTTTTTAACGGACAAGTAGAGCATTCAAATTGCGAACTTTCTATCTGATCCCAATTCTCCAAAGCCATTTAGTAAGAAGTGCATCATTATTCTTTCTAAAGCGAACAATTCCCAATCCTCCTAAAGAGCAAGGAACGGTAACTAAAGACCAATTAGTTAATTGACTTCCCTCTGCCTCACCACCATTCCATAAGAAATCTCTGAAGACTTTTTCCAGCCTCTAACTAACCTTCACCGTGGAGATATTTTGAAACTCTTGCTTTGTCTTCGTATTTCTCTTCACCATTTTGATGAATGCTACATCCTTTCTGATGAGTAAGCGCATTTTAAAGAATAAAAATGCTATTTTAGGAAACATTTCGAATGCATCATTAATGGCATTTAATTTGATTGTTCTTGGTTCAAAGTTCCTCAACATTAGTAGTTATCTAATAATAGCTCTCTTTTTCTACAGAGCATCTTGTACCATAAGCCTATAACCATTCTCTGTTCCTCTAGATAAATTGTTGATGACCTTTCTTTCTTCTATCCTCTGTTTTTTTGGATGGTGGCGGAGAACAGTATGTTGAAGTTGTTCCACAGATGGAAAAGCAGAGACGGTTGGAGCAGATCCTTAGGTCCCAAGAACGGGGTTCTAAGGTAATAATTTTTTGTTCCACAAAGAGGTTGTGTGATCAGCTTGCACGGAATCTTGGGCGTGGTTTCGGGGCTGCTGCAATTCATGGAGACAAATCACAGGGGGAGCGTGATTGGGTATTGAACCAGTTTCGTAGCGGAAAGTCTCCTATACTAGTTGCCACAGATGTTGCTGCCCGCGGGCTCGACATCAAAGATATAAGGTAGGCCCTCTTTTGTGCTCTTTTCTCTATGGTACCAAGCGAGAGTCTTGGGACTAAAATTTGATCGAAAATGGATCTGATGTGACTGGTTTTAGGGTTTTGTATGCTAATTGTCTTGTGATTTTTGCACTGAGTACTCTGATTTATTGGATTCATTCTTACCAGAGTGGTGATCAACTATGATTTTCCCACTGGAATCGAGGATTATGTTCACCGAATCGGAAGAACTGGGAGAGCTGGAGCAACGGGAGTCGCATATACCTTCTTCTCTGAACAGGATTGGAAATATGCTGCTGATTTGATTAAAGTACTAGAGGGTGCGGATCAGCATGTGCCTCCTGAGTTGCGAGATATGGCTATGCGTGGGGGGCCGAGTTTTGGGAAGGATAGGGGTGGTATGGGTCGTTTTGATGCCGGTATGGGTGGCAGTCGCTGGGATTCTGGAGGCCGAGGTGGCATGAGAGATGGTGGGTTTGGTGGTCGTGGTGGTGCACGAGATGGTGGGTTTGGTGGCCGTGGCGGGATGAGAGATGGCGGGTTTGGTGGACGTGGTAACATGAGGGATGGTGGTGCTGCTGGTGGACGTGGTGGGAGAGGCGATTTCTTTCCTGGGCGGGGTAACAGAGGACGGGGCTTTGGTGGCCCTCCTGGGGGTCATGTTGGTTGGGGAAGGGGTGATCGTGGTGGCCCGCACGATAGGTACAACAGTGTGGATGGACGAGGACGTGGACGTGGACAGGGTCGATTTGATAGCAGAAGAGACTTTTCCAATAGGAGTAGAGGTAGAAGTTATAGCCGTAGCCCTGAAAGAGTCCGAACATGGGGTTACAGCCGAAGTCGAAGTCGCAGTGGTAGCCGTAGTCGTAGCAGTAGAAGCTGGAGTCGCAGTAGAAGTCGTAGCAGGAGCAGAAGCAGGAGCCGAAGTAGAACTAGGAGTCGA

mRNA sequence

CAATTTGAAATACATTTTGAAGCCATGGAGACTGGGGAGTCTGCTCCCCCTTCCCTCGGTCCTCGTTATGCACCCGACGATCCTACTCTTCCCAAGCCTTGGAAGGGGTTGATCGATGGGAGCACTGGACTATTATACTACTGGAACCCTGAAACCAACGTCACTCAGTATGAGAAACCAGTCTCTTTGCCACCACCACTGCCACTCGGTCCTCATCCTAGTGCCTCTACTTCCAAGCCTGCTTCAATTCCGGAGGCTCATTCCATGCCAACAAATGGCACATTAACGCCTCACGGGCAGCCAAACCATCATGTCCCTCAACAAGAAGGCCAATCAAACAGCCAGCTTTCTCAACAACCTGGACATTTAATATCACAGCAACACAGTTCTGTTACAGGGCAGGTAAATGTTAATCACCATCCTGGTATGCAAATGGCACCGGATGGGCGTCAACATAGTGCGCAACCGAATCAGGTCATGCAGCAACCAGGGATGTTTGCAATGTCATCACAACATCTTGGCCAGCAGCATGTCATGCAACAAGGTCAGAAAATGGCCCATACGAATCAACAAATGGCTCAGCATCCTCCTAACCAGCAAGTCTTGCAGAATCCAGGACAACAAATACCACAGCCATCAATCCAGAATATAGGACAGCCGAACATGCAAAATCAAACCCCATTAGTTGGCCAGCCTCAAGGTCCGCAATATGGTCAGCAGCAGCTTCAGTATATGGGTTACCAGCAAAGCGTACATCCAAGTGTTCAGCAAAATTCACAGCAGCAAGTTAAACAAAGCCCTTTAGGTCAACCATTTGTTAATCACCTCGAACAGAAGTCGGGTTTTCTGAACAGAGAGGAGGATAACCTTCAGTCAGGAAACCAAGTTGGATTTTCTTCTTCTCAGTTTCAACAAAGTGGTGGTACCTCATCTATTCATAACCTTCATCCTGGAACCAATTCTTCTCAAATGCAACAGTTTGGTTTAGCTACAGATCAAGCACGACATTTTGGTGGCTCTCCAGGAAACATGCAACAGCAGCATTCTGTGGTTCAGTTGCAGCATGCAGGTACTGAATTGACTCATCGCCAACATCATTCTAGATTCCAAGATCAAATGGGCCCAGCTGTGATGCAGGGGCAGCAAGCTGGTGCTGAAAATTTGCCTGGCAGAGCTGGAAATGAATTTTACTTTGGCAGGAATGAGGGGCCTGGCACTGGTCCACATCAACCAAGGCTTGCAGCCATACCAATGGCAAGGAGCCAGCAGGAAACAAGGATGGGTGGTGTTCCATTTCCAAGTGTGGCACCTGGTCATCCTAGTGGGACAAATTTTGCGGCTGGGCACTCACATAGCATGTATAGCCATGGATCTGGTGGTCCATCATTGCCAAATAATGCTCTGATAGGCCCTCCTCATGTTGGAGCATCAGATGTTACTAATATGTCGCCTGTTGAAGTTTATCGTCAACAGCATGAAGTAACTGCTACGGGTGACAATGTTCCAGCTCCTTTCATGACATTTGAGGCTACTGGCTTCCCTCCAGAGCTACTGAGAGAGGCAATCTATATTTCCATTTATATGCCGCAGATATATTCTGCTGGATTCTCATCTCCTACGCCAATTCAAGCACAAACATGGCCCATTGCCCTGCAAGGTAGGGACATAGTCGCAATAGCTAAAACGGGGTCTGGAAAAACTTTGGGCTATTTGATTCCCGCCTTCATTCTTCTTAGGCAGTGCCGAAATAATCCACAGAATGGGCCAACGGTGTTGGTTTTGGCTCCTACTAGGGAGCTTGCTACTCAAATACAAGATGAGGCAATTAAATTTGGGAGGTCTTCCAGGGTCTGTTGTACGTGCTTGTATGGTGGAGCTCCAAAAGGTCCTCAGCTGAAAGAATTAGATCGTGGTGCTGATATTGTCGTGGCAACTCCTGGCCGGCTTAATGATATACTAGAAATGAAGATGATCAACTTTAGGCAAGTCTCACTTCTTGTACTTGATGAAGCTGATCGGATGCTTGACATGGGATTTGAACCTCAAATTCGGAAGATTGTGAATGAAATACCACCACGCAGACAAACTCTTATGTATACAGCAACCTGGCCCAAGGAAGTAAGAAAAATCGCGAATGATCTTCTCGTCAACTCTGTCCAGGTGAATATTGGTAGCGTTGATGAACTTGCTGCTAACAAGGCTATCACACAGTATGTTGAAGTTGTTCCACAGATGGAAAAGCAGAGACGGTTGGAGCAGATCCTTAGGTCCCAAGAACGGGGTTCTAAGGTAATAATTTTTTGTTCCACAAAGAGGTTGTGTGATCAGCTTGCACGGAATCTTGGGCGTGGTTTCGGGGCTGCTGCAATTCATGGAGACAAATCACAGGGGGAGCGTGATTGGGTATTGAACCAGTTTCGTAGCGGAAAGTCTCCTATACTAGTTGCCACAGATGTTGCTGCCCGCGGGCTCGACATCAAAGATATAAGAGTGGTGATCAACTATGATTTTCCCACTGGAATCGAGGATTATGTTCACCGAATCGGAAGAACTGGGAGAGCTGGAGCAACGGGAGTCGCATATACCTTCTTCTCTGAACAGGATTGGAAATATGCTGCTGATTTGATTAAAGTACTAGAGGGTGCGGATCAGCATGTGCCTCCTGAGTTGCGAGATATGGCTATGCGTGGGGGGCCGAGTTTTGGGAAGGATAGGGGTGGTATGGGTCGTTTTGATGCCGGTATGGGTGGCAGTCGCTGGGATTCTGGAGGCCGAGGTGGCATGAGAGATGGTGGGTTTGGTGGTCGTGGTGGTGCACGAGATGGTGGGTTTGGTGGCCGTGGCGGGATGAGAGATGGCGGGTTTGGTGGACGTGGTAACATGAGGGATGGTGGTGCTGCTGGTGGACGTGGTGGGAGAGGCGATTTCTTTCCTGGGCGGGGTAACAGAGGACGGGGCTTTGGTGGCCCTCCTGGGGGTCATGTTGGTTGGGGAAGGGGTGATCGTGGTGGCCCGCACGATAGGTACAACAGTGTGGATGGACGAGGACGTGGACGTGGACAGGGTCGATTTGATAGCAGAAGAGACTTTTCCAATAGGAGTAGAGGTAGAAGTTATAGCCGTAGCCCTGAAAGAGTCCGAACATGGGGTTACAGCCGAAGTCGAAGTCGCAGTGGTAGCCGTAGTCGTAGCAGTAGAAGCTGGAGTCGCAGTAGAAGTCGTAGCAGGAGCAGAAGCAGGAGCCGAAGTAGAACTAGGAGTCGA

Coding sequence (CDS)

CAATTTGAAATACATTTTGAAGCCATGGAGACTGGGGAGTCTGCTCCCCCTTCCCTCGGTCCTCGTTATGCACCCGACGATCCTACTCTTCCCAAGCCTTGGAAGGGGTTGATCGATGGGAGCACTGGACTATTATACTACTGGAACCCTGAAACCAACGTCACTCAGTATGAGAAACCAGTCTCTTTGCCACCACCACTGCCACTCGGTCCTCATCCTAGTGCCTCTACTTCCAAGCCTGCTTCAATTCCGGAGGCTCATTCCATGCCAACAAATGGCACATTAACGCCTCACGGGCAGCCAAACCATCATGTCCCTCAACAAGAAGGCCAATCAAACAGCCAGCTTTCTCAACAACCTGGACATTTAATATCACAGCAACACAGTTCTGTTACAGGGCAGGTAAATGTTAATCACCATCCTGGTATGCAAATGGCACCGGATGGGCGTCAACATAGTGCGCAACCGAATCAGGTCATGCAGCAACCAGGGATGTTTGCAATGTCATCACAACATCTTGGCCAGCAGCATGTCATGCAACAAGGTCAGAAAATGGCCCATACGAATCAACAAATGGCTCAGCATCCTCCTAACCAGCAAGTCTTGCAGAATCCAGGACAACAAATACCACAGCCATCAATCCAGAATATAGGACAGCCGAACATGCAAAATCAAACCCCATTAGTTGGCCAGCCTCAAGGTCCGCAATATGGTCAGCAGCAGCTTCAGTATATGGGTTACCAGCAAAGCGTACATCCAAGTGTTCAGCAAAATTCACAGCAGCAAGTTAAACAAAGCCCTTTAGGTCAACCATTTGTTAATCACCTCGAACAGAAGTCGGGTTTTCTGAACAGAGAGGAGGATAACCTTCAGTCAGGAAACCAAGTTGGATTTTCTTCTTCTCAGTTTCAACAAAGTGGTGGTACCTCATCTATTCATAACCTTCATCCTGGAACCAATTCTTCTCAAATGCAACAGTTTGGTTTAGCTACAGATCAAGCACGACATTTTGGTGGCTCTCCAGGAAACATGCAACAGCAGCATTCTGTGGTTCAGTTGCAGCATGCAGGTACTGAATTGACTCATCGCCAACATCATTCTAGATTCCAAGATCAAATGGGCCCAGCTGTGATGCAGGGGCAGCAAGCTGGTGCTGAAAATTTGCCTGGCAGAGCTGGAAATGAATTTTACTTTGGCAGGAATGAGGGGCCTGGCACTGGTCCACATCAACCAAGGCTTGCAGCCATACCAATGGCAAGGAGCCAGCAGGAAACAAGGATGGGTGGTGTTCCATTTCCAAGTGTGGCACCTGGTCATCCTAGTGGGACAAATTTTGCGGCTGGGCACTCACATAGCATGTATAGCCATGGATCTGGTGGTCCATCATTGCCAAATAATGCTCTGATAGGCCCTCCTCATGTTGGAGCATCAGATGTTACTAATATGTCGCCTGTTGAAGTTTATCGTCAACAGCATGAAGTAACTGCTACGGGTGACAATGTTCCAGCTCCTTTCATGACATTTGAGGCTACTGGCTTCCCTCCAGAGCTACTGAGAGAGGCAATCTATATTTCCATTTATATGCCGCAGATATATTCTGCTGGATTCTCATCTCCTACGCCAATTCAAGCACAAACATGGCCCATTGCCCTGCAAGGTAGGGACATAGTCGCAATAGCTAAAACGGGGTCTGGAAAAACTTTGGGCTATTTGATTCCCGCCTTCATTCTTCTTAGGCAGTGCCGAAATAATCCACAGAATGGGCCAACGGTGTTGGTTTTGGCTCCTACTAGGGAGCTTGCTACTCAAATACAAGATGAGGCAATTAAATTTGGGAGGTCTTCCAGGGTCTGTTGTACGTGCTTGTATGGTGGAGCTCCAAAAGGTCCTCAGCTGAAAGAATTAGATCGTGGTGCTGATATTGTCGTGGCAACTCCTGGCCGGCTTAATGATATACTAGAAATGAAGATGATCAACTTTAGGCAAGTCTCACTTCTTGTACTTGATGAAGCTGATCGGATGCTTGACATGGGATTTGAACCTCAAATTCGGAAGATTGTGAATGAAATACCACCACGCAGACAAACTCTTATGTATACAGCAACCTGGCCCAAGGAAGTAAGAAAAATCGCGAATGATCTTCTCGTCAACTCTGTCCAGGTGAATATTGGTAGCGTTGATGAACTTGCTGCTAACAAGGCTATCACACAGTATGTTGAAGTTGTTCCACAGATGGAAAAGCAGAGACGGTTGGAGCAGATCCTTAGGTCCCAAGAACGGGGTTCTAAGGTAATAATTTTTTGTTCCACAAAGAGGTTGTGTGATCAGCTTGCACGGAATCTTGGGCGTGGTTTCGGGGCTGCTGCAATTCATGGAGACAAATCACAGGGGGAGCGTGATTGGGTATTGAACCAGTTTCGTAGCGGAAAGTCTCCTATACTAGTTGCCACAGATGTTGCTGCCCGCGGGCTCGACATCAAAGATATAAGAGTGGTGATCAACTATGATTTTCCCACTGGAATCGAGGATTATGTTCACCGAATCGGAAGAACTGGGAGAGCTGGAGCAACGGGAGTCGCATATACCTTCTTCTCTGAACAGGATTGGAAATATGCTGCTGATTTGATTAAAGTACTAGAGGGTGCGGATCAGCATGTGCCTCCTGAGTTGCGAGATATGGCTATGCGTGGGGGGCCGAGTTTTGGGAAGGATAGGGGTGGTATGGGTCGTTTTGATGCCGGTATGGGTGGCAGTCGCTGGGATTCTGGAGGCCGAGGTGGCATGAGAGATGGTGGGTTTGGTGGTCGTGGTGGTGCACGAGATGGTGGGTTTGGTGGCCGTGGCGGGATGAGAGATGGCGGGTTTGGTGGACGTGGTAACATGAGGGATGGTGGTGCTGCTGGTGGACGTGGTGGGAGAGGCGATTTCTTTCCTGGGCGGGGTAACAGAGGACGGGGCTTTGGTGGCCCTCCTGGGGGTCATGTTGGTTGGGGAAGGGGTGATCGTGGTGGCCCGCACGATAGGTACAACAGTGTGGATGGACGAGGACGTGGACGTGGACAGGGTCGATTTGATAGCAGAAGAGACTTTTCCAATAGGAGTAGAGGTAGAAGTTATAGCCGTAGCCCTGAAAGAGTCCGAACATGGGGTTACAGCCGAAGTCGAAGTCGCAGTGGTAGCCGTAGTCGTAGCAGTAGAAGCTGGAGTCGCAGTAGAAGTCGTAGCAGGAGCAGAAGCAGGAGCCGAAGTAGAACTAGGAGTCGA

Protein sequence

QFEIHFEAMETGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLPLGPHPSASTSKPASIPEAHSMPTNGTLTPHGQPNHHVPQQEGQSNSQLSQQPGHLISQQHSSVTGQVNVNHHPGMQMAPDGRQHSAQPNQVMQQPGMFAMSSQHLGQQHVMQQGQKMAHTNQQMAQHPPNQQVLQNPGQQIPQPSIQNIGQPNMQNQTPLVGQPQGPQYGQQQLQYMGYQQSVHPSVQQNSQQQVKQSPLGQPFVNHLEQKSGFLNREEDNLQSGNQVGFSSSQFQQSGGTSSIHNLHPGTNSSQMQQFGLATDQARHFGGSPGNMQQQHSVVQLQHAGTELTHRQHHSRFQDQMGPAVMQGQQAGAENLPGRAGNEFYFGRNEGPGTGPHQPRLAAIPMARSQQETRMGGVPFPSVAPGHPSGTNFAAGHSHSMYSHGSGGPSLPNNALIGPPHVGASDVTNMSPVEVYRQQHEVTATGDNVPAPFMTFEATGFPPELLREAIYISIYMPQIYSAGFSSPTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFILLRQCRNNPQNGPTVLVLAPTRELATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTFFSEQDWKYAADLIKVLEGADQHVPPELRDMAMRGGPSFGKDRGGMGRFDAGMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGNMRDGGAAGGRGGRGDFFPGRGNRGRGFGGPPGGHVGWGRGDRGGPHDRYNSVDGRGRGRGQGRFDSRRDFSNRSRGRSYSRSPERVRTWGYSRSRSRSGSRSRSSRSWSRSRSRSRSRSRSRSRTRSR

Homology

[Close]

BLAST of MS008218 vs. NCBI nr
Match: XP_022137851.1 (DEAD-box ATP-dependent RNA helicase 46 [Momordica charantia])

HSP 1 Score: 2048.5 bits (5306), Expect = 0.0e+00
Identity = 1063/1080 (98.43%), Postives = 1065/1080 (98.61%), Query Frame = 0


Query: 9    METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 68
            METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1    METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60

Query: 69   LGPHPSASTSKPASIPEAHSMPTNGTLTPHGQPNHHVPQQEGQSNSQLSQQPGHLISQQH 128
            LGPHPSASTSKPASIPEAHSMPTNGTLTPHGQPNHHVPQQEGQSNSQLSQQPGHLISQQH
Sbjct: 61   LGPHPSASTSKPASIPEAHSMPTNGTLTPHGQPNHHVPQQEGQSNSQLSQQPGHLISQQH 120

Query: 129  SSVTGQVNVNHHPGMQMAPDGRQHSAQPNQVMQQPGMFAMSSQHLGQQHVMQQGQKMAHT 188
            SSVTG VNVNHHPGMQMAPDGRQHSAQPNQVMQQPGMFAMSSQHLGQQHVMQQ QKMAH 
Sbjct: 121  SSVTGHVNVNHHPGMQMAPDGRQHSAQPNQVMQQPGMFAMSSQHLGQQHVMQQSQKMAHK 180

Query: 189  NQQMAQHPPNQQVLQNPGQQIPQPSIQNIGQPNMQNQTPLVGQPQGPQYGQQQLQYMGYQ 248
            NQQMAQHPPNQQVLQNPGQQIPQPSIQN+GQPNMQNQTPLVGQPQGPQYGQQQLQYMGYQ
Sbjct: 181  NQQMAQHPPNQQVLQNPGQQIPQPSIQNLGQPNMQNQTPLVGQPQGPQYGQQQLQYMGYQ 240

Query: 249  QSVHPSVQQNSQQQVKQSPLGQPFVNHLEQKSGFLNREEDNLQSGNQVGFSSSQFQQSGG 308
            QSVHPSVQQNSQQQVKQSPLGQPFVNHLEQKSGFLNREEDNLQSGNQVGFSSSQFQQSGG
Sbjct: 241  QSVHPSVQQNSQQQVKQSPLGQPFVNHLEQKSGFLNREEDNLQSGNQVGFSSSQFQQSGG 300

Query: 309  TSSIHNLHPGTNSSQMQQFGLATDQARHFGGSPGNMQQQHSVVQLQHAGTELTHRQHHSR 368
            TSSIHNLHPGTNSSQMQQFGLATDQARHFGGSPGN+QQQHSVVQLQHAGTELTHRQHHSR
Sbjct: 301  TSSIHNLHPGTNSSQMQQFGLATDQARHFGGSPGNLQQQHSVVQLQHAGTELTHRQHHSR 360

Query: 369  FQDQMGPAVMQGQQAGAENLPGRAGNEFYFGRNEGPGTGPHQPRLAAIPMARSQQETRMG 428
            FQDQMGPAVMQGQQAGAENLPGRAGNEFYFGRNEGPGTGPHQPRLAAIPMARSQQETRMG
Sbjct: 361  FQDQMGPAVMQGQQAGAENLPGRAGNEFYFGRNEGPGTGPHQPRLAAIPMARSQQETRMG 420

Query: 429  GVPFPSVAPGHPSGTNFAAGHSHSMYSHGSGGPSLPNNALIGPPHVGASDVTNMSPVEVY 488
            GVPFPSVAPGHPSGTNFAAGHSHSMYSHGSGGPSLPNNALIGPPHV ASDVTNMSPVEVY
Sbjct: 421  GVPFPSVAPGHPSGTNFAAGHSHSMYSHGSGGPSLPNNALIGPPHVVASDVTNMSPVEVY 480

Query: 489  RQQHEVTATGDNVPAPFMTFEATGFPPELLREAIYISIYMPQIYSAGFSSPTPIQAQTWP 548
            RQQHEVTATGDNVPAPFMTFEATGFPPELLRE          IYSAGFSSPTPIQAQTWP
Sbjct: 481  RQQHEVTATGDNVPAPFMTFEATGFPPELLRE----------IYSAGFSSPTPIQAQTWP 540

Query: 549  IALQGRDIVAIAKTGSGKTLGYLIPAFILLRQCRNNPQNGPTVLVLAPTRELATQIQDEA 608
            IALQGRDIVAIAKTGSGKTLGYLIPAFILLRQCRNNPQNGPTVLVLAPTRELATQIQDEA
Sbjct: 541  IALQGRDIVAIAKTGSGKTLGYLIPAFILLRQCRNNPQNGPTVLVLAPTRELATQIQDEA 600

Query: 609  IKFGRSSRVCCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSLLVL 668
            IKFGRSSRVCCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSLLVL
Sbjct: 601  IKFGRSSRVCCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSLLVL 660

Query: 669  DEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDE 728
            DEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDE
Sbjct: 661  DEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDE 720

Query: 729  LAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAA 788
            LAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAA
Sbjct: 721  LAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAA 780

Query: 789  AIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRI 848
            AIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRI
Sbjct: 781  AIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRI 840

Query: 849  GRTGRAGATGVAYTFFSEQDWKYAADLIKVLEGADQHVPPELRDMAMRGGPSFGKDRGGM 908
            GRTGRAGATGVAYTFFSEQDWKYAADLIKVLEGADQHVPPELRDMAMRGGPSFGKDRGGM
Sbjct: 841  GRTGRAGATGVAYTFFSEQDWKYAADLIKVLEGADQHVPPELRDMAMRGGPSFGKDRGGM 900

Query: 909  GRFDAGMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGNMRDGGAAG 968
            GRFDAGMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGNMRDGGAAG
Sbjct: 901  GRFDAGMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGNMRDGGAAG 960

Query: 969  GRGGRGDFFPGRGNRGRGFGGPPGGHVGWGRGDRGGPHDRYNSVDGRGRGRGQGRFDSRR 1028
            GRGGRGDFFPGRGNRGRGFGGPPGGHVGWGRGDRGGPHDRYNSVDGRGRGRGQGRFDSRR
Sbjct: 961  GRGGRGDFFPGRGNRGRGFGGPPGGHVGWGRGDRGGPHDRYNSVDGRGRGRGQGRFDSRR 1020

Query: 1029 DFSNRSRGRSYSRSPERVRTWGYSRSRSRSGSRSRSSRSWSRSRSRSRSRSRSRSRTRSR 1088
            DFSNRSRGRSYSRSPERVRTWGYSRSRSRSGS SRSSRSWSRSRSRSRSRSRSRSRTRSR
Sbjct: 1021 DFSNRSRGRSYSRSPERVRTWGYSRSRSRSGSHSRSSRSWSRSRSRSRSRSRSRSRTRSR 1070

[Close]

BLAST of MS008218 vs. NCBI nr
Match: XP_023539269.1 (DEAD-box ATP-dependent RNA helicase 40-like [Cucurbita pepo subsp. pepo] >XP_023539270.1 DEAD-box ATP-dependent RNA helicase 40-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1884.0 bits (4879), Expect = 0.0e+00
Identity = 980/1078 (90.91%), Postives = 1019/1078 (94.53%), Query Frame = 0


Query: 9    METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 68
            METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1    METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60

Query: 69   LGPHPSASTSKPASIPEAHSMPTNGTLTPHGQPNHHVPQQEGQSNSQLSQQPGHLISQQH 128
            L PHPSASTSKP SIPE HSMP+NGTLTPH Q +HHVPQQEGQSNSQLSQQPGHL+SQQH
Sbjct: 61   LAPHPSASTSKPTSIPEGHSMPSNGTLTPHVQQSHHVPQQEGQSNSQLSQQPGHLMSQQH 120

Query: 129  SSVTGQVNVNHHPGMQMAPDGRQHSAQPNQVMQQPGMFAMSSQHLGQQHVMQQGQKMAHT 188
            SSV GQ  VNHHP MQMAPDGRQHS QPNQV+QQ GMF MSSQH+GQQ VM QGQKMAH 
Sbjct: 121  SSVAGQAIVNHHPSMQMAPDGRQHSVQPNQVLQQQGMFPMSSQHIGQQQVMHQGQKMAHA 180

Query: 189  NQQMAQHPPNQQVLQNPGQQIPQPSIQNIGQPNMQNQTPLVGQPQGPQYGQQQLQYMGYQ 248
            NQQ++QH PNQQ LQNPGQQIPQPSIQ++GQPNMQNQTPLVGQPQGPQYGQQQ QY+GYQ
Sbjct: 181  NQQISQH-PNQQPLQNPGQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQQPQYIGYQ 240

Query: 249  QSVHPSVQQNSQQQVKQSPLGQPFVNHLEQKSGFLNREEDNLQSGNQVGFSSSQFQQSGG 308
            QSVHPSVQQN QQQV+QSPLGQPF NHLEQKS F  REEDN++SGNQ+GFS+SQFQQSGG
Sbjct: 241  QSVHPSVQQNPQQQVQQSPLGQPFGNHLEQKSAFQKREEDNIESGNQIGFSTSQFQQSGG 300

Query: 309  TSSIHNLHPGTNSSQMQQFGLATDQARHFGGSPGNMQQQHSVVQLQHAGTELTHRQHHSR 368
            TSSIH++HPGTNSSQMQQ+GL +DQAR FGGSPGNMQQ H VVQLQH+GTELTHRQHHSR
Sbjct: 301  TSSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSR 360

Query: 369  FQDQMGPAVMQGQQAGAENLPGRAGNEFYFGRNEGPGTGPHQPRLAAIPMARSQQETRMG 428
            FQD MGPA MQ +QAG+ENLPGRAGNE++FGRNEGPG GPHQPRLAAIPMARSQQ+TRM 
Sbjct: 361  FQDPMGPAAMQEKQAGSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMARSQQDTRMS 420

Query: 429  GVPFPSVAPGHPSGTNFAAGHSHSMYSHGSGGPSLPNNALIGPPHVGASDVTNMSPVEVY 488
            GVPFPSVAPGHPSGT+FAAG SH+MY+HGSGGPSL NNAL+GPPH+GASDVTNMSPVEVY
Sbjct: 421  GVPFPSVAPGHPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVY 480

Query: 489  RQQHEVTATGDNVPAPFMTFEATGFPPELLREAIYISIYMPQIYSAGFSSPTPIQAQTWP 548
            RQQHEVTATGDNVPAPFMTFEATGFPPE+LRE          IYSAGFSSPTPIQAQTWP
Sbjct: 481  RQQHEVTATGDNVPAPFMTFEATGFPPEILRE----------IYSAGFSSPTPIQAQTWP 540

Query: 549  IALQGRDIVAIAKTGSGKTLGYLIPAFILLRQCRNNPQNGPTVLVLAPTRELATQIQDEA 608
            IALQGRDIVAIAKTGSGKTLGYLIPAF+LLRQCRNNPQNGPTVLVLAPTRELATQIQDEA
Sbjct: 541  IALQGRDIVAIAKTGSGKTLGYLIPAFVLLRQCRNNPQNGPTVLVLAPTRELATQIQDEA 600

Query: 609  IKFGRSSRVCCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSLLVL 668
            IKFGR+SR+CCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSLLVL
Sbjct: 601  IKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSLLVL 660

Query: 669  DEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDE 728
            DEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDE
Sbjct: 661  DEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDE 720

Query: 729  LAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAA 788
            LAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAA
Sbjct: 721  LAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAA 780

Query: 789  AIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRI 848
            AIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVIN+DFPTGIEDYVHRI
Sbjct: 781  AIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINFDFPTGIEDYVHRI 840

Query: 849  GRTGRAGATGVAYTFFSEQDWKYAADLIKVLEGADQHVPPELRDMAMRGGPSFGKDRGGM 908
            GRTGRAGATG+AYTFF EQDWKYAADLIKVLEGADQ VPPELRDMAMRGGPSFGKDRGG+
Sbjct: 841  GRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRDMAMRGGPSFGKDRGGL 900

Query: 909  GRFDAGMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGNMRDGGAAG 968
            GRFDA MGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRG MRD G AG
Sbjct: 901  GRFDAAMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGGMRD-GLAG 960

Query: 969  GRGGRGDFFPGRGNRGRGFGGPPGGHVGWGRGDRGGPHDRYNSVDGRGRGRGQGRFDSRR 1028
            GRGGRGDFF GRG  GR FGGPPGGHVGWGRGDRGGP DRYNSVDGRGRGRGQGRFD+RR
Sbjct: 961  GRGGRGDFFSGRGRGGRAFGGPPGGHVGWGRGDRGGPQDRYNSVDGRGRGRGQGRFDNRR 1020

Query: 1029 DFSNRSRGRSYSRSPERVRTWGYSRSRSRSGSRSRSSRSWSRSRSRSRSRSRSRSRTR 1087
            DFSNRSRGRSYSRSPERVRTWGYSRSRSRSG  S SSRSWSRSRSRSRSRSRSRS +R
Sbjct: 1021 DFSNRSRGRSYSRSPERVRTWGYSRSRSRSG--SHSSRSWSRSRSRSRSRSRSRSWSR 1064

[Close]

BLAST of MS008218 vs. NCBI nr
Match: KAG6582152.1 (DEAD-box ATP-dependent RNA helicase 40, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1872.1 bits (4848), Expect = 0.0e+00
Identity = 983/1089 (90.27%), Postives = 1022/1089 (93.85%), Query Frame = 0


Query: 9    METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 68
            METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1    METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60

Query: 69   LGPHPSASTSKPASIPEAHSMPTNGTLTPHGQPNHHVPQQEGQSNSQLSQQPGHLISQQH 128
            LGPHP  S+SKP S+ EAHSMP+NG LTPH Q NHHVPQQEGQSNSQLSQQPGHL+SQQH
Sbjct: 61   LGPHPGVSSSKPTSVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQH 120

Query: 129  SSVTGQVNVNHHPGMQMAPDGRQHSAQPNQVMQQPGMFAMSSQHLGQQHVMQQGQKMAHT 188
            SSV GQ  VNHHPG+QMAPDGRQ+S+Q NQVMQQ G+FAMSS HLGQQ VM QGQKMAH 
Sbjct: 121  SSVAGQATVNHHPGLQMAPDGRQNSSQSNQVMQQQGLFAMSSPHLGQQQVMHQGQKMAHA 180

Query: 189  NQQMAQHPPNQ------QVLQNPGQQIPQPSIQNIGQPNMQNQTPLVGQPQG--PQYGQQ 248
            N QM+QHP  Q      Q LQNPGQQIPQPSIQ++GQP+MQNQTPLVGQPQG  PQYGQQ
Sbjct: 181  NPQMSQHPNQQPPQNPGQPLQNPGQQIPQPSIQHLGQPSMQNQTPLVGQPQGPQPQYGQQ 240

Query: 249  QLQYMGYQQSVHPSVQQNSQQQVKQSPLGQPFVNHLEQKSGFLNREEDNLQSGNQVGFSS 308
            QLQY+GYQQSVHPSVQ N QQQV+QSPLGQPF NHLEQKS FL REEDN+QSGNQVGFSS
Sbjct: 241  QLQYIGYQQSVHPSVQHNLQQQVQQSPLGQPFGNHLEQKSAFLKREEDNIQSGNQVGFSS 300

Query: 309  SQFQQSGGTSSIHNLHPGTNSSQMQQFGLATDQARHFGGSPGNMQQQHSVVQLQHAGTEL 368
            SQF+QSGGTSSIHNLHPGTNSSQMQQFG A+DQAR FGGSPGN+QQQ+ VVQLQHAGTEL
Sbjct: 301  SQFEQSGGTSSIHNLHPGTNSSQMQQFGSASDQARQFGGSPGNIQQQNPVVQLQHAGTEL 360

Query: 369  THRQHHSRFQDQMGPAVMQGQQAGAENLPGRAGNEFYFGRNEGPGTGPHQPRLAAIPMAR 428
             HRQHHSRFQDQM PAVMQGQQ  AENLPGRAGNE+YFGRNEGPG GP QPRLAAIPMAR
Sbjct: 361  AHRQHHSRFQDQMSPAVMQGQQTSAENLPGRAGNEYYFGRNEGPGVGPLQPRLAAIPMAR 420

Query: 429  SQQETRMGGVPFPSVAPGHPSGTNFAAGHSHSMYSHGSGGPSLPNNALIGPPHVGASDVT 488
            SQQ+TRM GV FP+ APGHPSGTNFAAGHSH+MYSHGSGGP L NNALIGPPH+GASDVT
Sbjct: 421  SQQDTRMSGVSFPTAAPGHPSGTNFAAGHSHNMYSHGSGGPPLSNNALIGPPHIGASDVT 480

Query: 489  NMSPVEVYRQQHEVTATGDNVPAPFMTFEATGFPPELLREAIYISIYMPQIYSAGFSSPT 548
            NMSPVEVYRQQHEVTATGDNVP+P+MTFEATGFPPE+LRE          IYSAGFSSPT
Sbjct: 481  NMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFPPEILRE----------IYSAGFSSPT 540

Query: 549  PIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFILLRQCRNNPQNGPTVLVLAPTREL 608
            PIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAF+LLRQCRNNPQNGPTVLVLAPTREL
Sbjct: 541  PIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTREL 600

Query: 609  ATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINF 668
            ATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKEL+RGADIVVATPGRLNDILEMKMI F
Sbjct: 601  ATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIKF 660

Query: 669  RQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQ 728
            RQ+SLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQ
Sbjct: 661  RQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQ 720

Query: 729  VNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARN 788
            VNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLAR+
Sbjct: 721  VNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARS 780

Query: 789  LGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTG 848
            LGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTG
Sbjct: 781  LGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTG 840

Query: 849  IEDYVHRIGRTGRAGATGVAYTFFSEQDWKYAADLIKVLEGADQHVPPELRDMAMRGGPS 908
            +EDYVHRIGRTGRAGATGVAYTFF+EQDWKYAADLIK+LEGADQHVPPELRDMAMRGGPS
Sbjct: 841  VEDYVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGADQHVPPELRDMAMRGGPS 900

Query: 909  FGKDRGGMGRFDAGMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGN 968
            FGKDRGGMGRFDA MGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGN
Sbjct: 901  FGKDRGGMGRFDAVMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGN 960

Query: 969  MRDGGAAGGRGGRGDFFPGRGNRGRGFGGPPGGHVGWGR-GDRGGPHDRYNSVDGRGRGR 1028
            MRD G AGGRGGRGDFFP RG RGRGFGGP GGHVGWGR GDRGGPHDR++SVDGRGRGR
Sbjct: 961  MRD-GTAGGRGGRGDFFPTRG-RGRGFGGPAGGHVGWGRGGDRGGPHDRFSSVDGRGRGR 1020

Query: 1029 GQGRFDSRRDFSNRSRGRSYSRSPERVRTWGYSRSRSRSGSRSRSSRSWSRSRSRSRSRS 1088
            GQ RFD+R DFSNRSRGRSYSRSPERVRTWGYSRSRSRSGSRSRSSRSWSRSRSRSRSRS
Sbjct: 1021 GQSRFDNRNDFSNRSRGRSYSRSPERVRTWGYSRSRSRSGSRSRSSRSWSRSRSRSRSRS 1077

[Close]

BLAST of MS008218 vs. NCBI nr
Match: XP_023527087.1 (DEAD-box ATP-dependent RNA helicase 40-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1865.9 bits (4832), Expect = 0.0e+00
Identity = 981/1090 (90.00%), Postives = 1019/1090 (93.49%), Query Frame = 0


Query: 9    METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 68
            METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1    METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60

Query: 69   LGPHPSASTSKPASIPEAHSMPTNGTLTPHGQPNHHVPQQEGQSNSQLSQQPGHLISQQH 128
            LGPHP  S+SKP S+ EAHSMP+NG LTPH Q NHHVPQQEGQSNSQLSQQPGHL+SQQH
Sbjct: 61   LGPHPGVSSSKPTSVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQH 120

Query: 129  SSVTGQVNVNHHPGMQMAPDGRQHSAQPNQVMQQPGMFAMSSQHLGQQHVMQQGQKMAHT 188
            SSV GQ  VNHHPG+QMAPDGRQ+S+Q NQVMQQ G+FAMSS HLGQQ VM QGQKMAH 
Sbjct: 121  SSVAGQATVNHHPGLQMAPDGRQNSSQSNQVMQQQGLFAMSSPHLGQQQVMHQGQKMAHA 180

Query: 189  NQQMAQHPPNQ------QVLQNPGQQIPQPSIQNIGQPNMQNQTPLVGQPQG--PQYGQQ 248
            N QM+QHP  Q      Q LQNPGQQIPQPSIQ++GQP+MQNQTPLVGQPQG  PQYGQQ
Sbjct: 181  NPQMSQHPNQQPPQNPGQPLQNPGQQIPQPSIQHLGQPSMQNQTPLVGQPQGPQPQYGQQ 240

Query: 249  QLQYMGYQQSVHPSVQQNSQQQVKQSPLGQPFVNHLEQKSGFLNREEDNLQSGNQVGFSS 308
            QLQY+GYQQSVHPSVQ N QQQV+QSPLGQPF NHLEQKS FL REEDN+QSGNQVGFSS
Sbjct: 241  QLQYIGYQQSVHPSVQHNLQQQVQQSPLGQPFGNHLEQKSAFLKREEDNIQSGNQVGFSS 300

Query: 309  SQFQQSGGTSSIHNLHPGTNSSQMQQFGLATDQARHFGGSPGNMQQQHSVVQLQHAGTEL 368
            SQF+QSGGTSSIHNLHPGTNSSQMQQFG A+DQAR FGGSPGN+QQQ+ VVQLQHAGTEL
Sbjct: 301  SQFEQSGGTSSIHNLHPGTNSSQMQQFGSASDQARQFGGSPGNIQQQNPVVQLQHAGTEL 360

Query: 369  THRQHHSRFQDQMGPAVMQGQQAGAENLPGRAGNEFYFGRNEGPGTGPHQPRLAAIPMAR 428
             HRQHHSRFQDQM PAVMQGQQ  AENLPGRAGNE+YFGRNEGPG GP QPRLAAIPMAR
Sbjct: 361  AHRQHHSRFQDQMSPAVMQGQQTSAENLPGRAGNEYYFGRNEGPGVGPLQPRLAAIPMAR 420

Query: 429  SQQETRMGGVPFPSVAPGHPSGTNFAAGHSHSMYSHGSGGPSLPNNALIGPPHVGASDVT 488
            SQQ+TRM GV FP+ APGHPSGTNFAAGHSH+MYSHGSGGP L NNALIGPPH+GASDVT
Sbjct: 421  SQQDTRMSGVSFPTAAPGHPSGTNFAAGHSHNMYSHGSGGPPLSNNALIGPPHIGASDVT 480

Query: 489  NMSPVEVYRQQHEVTATGDNVPAPFMTFEATGFPPELLREAIYISIYMPQIYSAGFSSPT 548
            NMSPVEVYRQQHEVTATGDNVP+P+MTFEATGFPPE+LRE          IYSAGFSSPT
Sbjct: 481  NMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFPPEILRE----------IYSAGFSSPT 540

Query: 549  PIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFILLRQCRNNPQNGPTVLVLAPTREL 608
            PIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAF+LLRQCRNNPQNGPTVLVLAPTREL
Sbjct: 541  PIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTREL 600

Query: 609  ATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINF 668
            ATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKEL+RGADIVVATPGRLNDILEMKMI F
Sbjct: 601  ATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIKF 660

Query: 669  RQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQ 728
            RQ+SLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQ
Sbjct: 661  RQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQ 720

Query: 729  VNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARN 788
            VNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLAR+
Sbjct: 721  VNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARS 780

Query: 789  LGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTG 848
            LGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTG
Sbjct: 781  LGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTG 840

Query: 849  IEDYVHRIGRTGRAGATGVAYTFFSEQDWKYAADLIKVLEGADQHVPPELRDMAMRGGPS 908
            +EDYVHRIGRTGRAGATGVAYTFF+EQDWKYAADLIK+LEGADQHVPPELRDMAMRGGPS
Sbjct: 841  VEDYVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGADQHVPPELRDMAMRGGPS 900

Query: 909  FGKDRGGMGRFDAGMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGN 968
            FGKDRGGMGRFDA MGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGN
Sbjct: 901  FGKDRGGMGRFDAVMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGN 960

Query: 969  MRDGGAAGGRGGRGDFFPGRGNRGRGFGGPPGGHVGWGRGDRGGPHDRYNSVDGRGRGRG 1028
            MRD GAAGGRGGRGDFFP RG RGRGFGGP GGHVGWGRGDRGGPHDR++SVDGRGRGRG
Sbjct: 961  MRD-GAAGGRGGRGDFFPTRG-RGRGFGGPAGGHVGWGRGDRGGPHDRFSSVDGRGRGRG 1020

Query: 1029 QGRFDSRRDFSNRSRGRSYSRSPERVRTWGYSRSRSR----SGSRSRSSRSWSRSRSRSR 1087
            Q RFD+R DFSNRSRGRSYSRSPERVRTWGYSRSRSR    S SRSRSSRSWSRSRSRSR
Sbjct: 1021 QSRFDNRNDFSNRSRGRSYSRSPERVRTWGYSRSRSRSRSGSRSRSRSSRSWSRSRSRSR 1078

[Close]

BLAST of MS008218 vs. NCBI nr
Match: XP_022964311.1 (DEAD-box ATP-dependent RNA helicase 40-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 1865.5 bits (4831), Expect = 0.0e+00
Identity = 975/1082 (90.11%), Postives = 1013/1082 (93.62%), Query Frame = 0


Query: 9    METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 68
            METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1    METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60

Query: 69   LGPHPSASTSKPASIPEAHSMPTNGTLTPHGQPNHHVPQQEGQSNSQLSQQPGHLISQQH 128
            L PHPSASTSKP SIPE HSMP+NGTLTPH Q NHHVPQQEGQSNSQLSQQPGHL+SQQH
Sbjct: 61   LAPHPSASTSKPTSIPEGHSMPSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQH 120

Query: 129  SSVTGQVNVNHHPGMQMAPDGRQHSAQPNQVMQQPGMFAMSSQHLGQQHVMQQGQKMAHT 188
            SSV GQ  VNHHP MQMAPDGRQHS QPNQV+QQ GMF MS QH+GQQ VM QGQKMAH 
Sbjct: 121  SSVAGQAIVNHHPSMQMAPDGRQHSLQPNQVLQQQGMFPMSLQHIGQQQVMHQGQKMAHA 180

Query: 189  NQQMAQHPPNQQVLQNPGQQIPQPSIQNIGQPNMQNQTPLVGQPQGPQYGQQQLQYMGYQ 248
            NQQ++QH PNQQ LQN GQQIPQPSIQ++GQPNMQNQTPLVGQPQGPQYGQQ  QYMGYQ
Sbjct: 181  NQQISQH-PNQQPLQNTGQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQHPQYMGYQ 240

Query: 249  QSVHPSVQQNSQQQVKQSPLGQPFVNHLEQKSGFLNREEDNLQSGNQVGFSSSQFQQSGG 308
            QSVHPSVQQNSQQQV++SPLGQPF NHLEQKS F  REEDN+QSGNQ+GFS+SQFQQSGG
Sbjct: 241  QSVHPSVQQNSQQQVQKSPLGQPFGNHLEQKSAFQKREEDNIQSGNQIGFSTSQFQQSGG 300

Query: 309  TSSIHNLHPGTNSSQMQQFGLATDQARHFGGSPGNMQQQHSVVQLQHAGTELTHRQHHSR 368
            TSSIH++HPGTNSSQMQQ+GL +DQAR FGGSPGNMQQ H VVQLQH+GTELTHRQHHSR
Sbjct: 301  TSSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSR 360

Query: 369  FQDQMGPAVMQGQQAGAENLPGRAGNEFYFGRNEGPGTGPHQPRLAAIPMARSQQETRMG 428
            FQD MGPA MQ +QAG+ENLPGRAGNE++FGRNEGPG GPHQPRLAAIPMARSQQ+ RM 
Sbjct: 361  FQDPMGPAAMQEKQAGSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMARSQQDARMS 420

Query: 429  GVPFPSVAPGHPSGTNFAAGHSHSMYSHGSGGPSLPNNALIGPPHVGASDVTNMSPVEVY 488
            GVPFPS AP HPSGT+FAAG SH+MY+HGSGGPSL NNAL+GPPH+GASDVTNMSPVEVY
Sbjct: 421  GVPFPSAAPSHPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVY 480

Query: 489  RQQHEVTATGDNVPAPFMTFEATGFPPELLREAIYISIYMPQIYSAGFSSPTPIQAQTWP 548
            RQQHEVTATGDNVPAPFMTFEATGFPPE+LRE          IYSAGFSSPTPIQAQTWP
Sbjct: 481  RQQHEVTATGDNVPAPFMTFEATGFPPEILRE----------IYSAGFSSPTPIQAQTWP 540

Query: 549  IALQGRDIVAIAKTGSGKTLGYLIPAFILLRQCRNNPQNGPTVLVLAPTRELATQIQDEA 608
            IALQGRDIVAIAKTGSGKTLGYLIPAF+LLRQCRNNPQNGPTVLVLAPTRELATQIQDEA
Sbjct: 541  IALQGRDIVAIAKTGSGKTLGYLIPAFVLLRQCRNNPQNGPTVLVLAPTRELATQIQDEA 600

Query: 609  IKFGRSSRVCCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSLLVL 668
            IKFGR+SR+CCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSLLVL
Sbjct: 601  IKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSLLVL 660

Query: 669  DEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDE 728
            DEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDE
Sbjct: 661  DEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDE 720

Query: 729  LAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAA 788
            LAANKAITQYVE VPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAA
Sbjct: 721  LAANKAITQYVEFVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAA 780

Query: 789  AIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRI 848
            AIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVIN+DFPTGIEDYVHRI
Sbjct: 781  AIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINFDFPTGIEDYVHRI 840

Query: 849  GRTGRAGATGVAYTFFSEQDWKYAADLIKVLEGADQHVPPELRDMAMRGGPSFGKDRGGM 908
            GRTGRAGATG+AYTFF EQDWKYAADLIKVLEGADQ VPPELRDMAMRGGPSFGKDRG +
Sbjct: 841  GRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRDMAMRGGPSFGKDRGAL 900

Query: 909  GRFDAGMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGNMRDGGAAG 968
            GRFDA MGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRG MRD G AG
Sbjct: 901  GRFDAAMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGGMRD-GLAG 960

Query: 969  GRGGRGDFFPGRGNRGRGFGGPPGGHVGWGRGDRGGPHDRYNSVDGRGRGRGQGRFDSRR 1028
            GRGGRGDFF GRG  GR FGGPPGGHVGW RGDRGGP DRY+SVDGRGRGRGQGRFD+RR
Sbjct: 961  GRGGRGDFFSGRGRGGRAFGGPPGGHVGWARGDRGGPQDRYSSVDGRGRGRGQGRFDNRR 1020

Query: 1029 DFSNRSRGRSYSRSPERVRTWGYSRSRSRSGSR--SRSSRSWSRSRSRSRSRSRSRSRTR 1088
            DFSNRSRGRSYSRSPERVRTWGYSRSRSRS SR  SRSSRSWSRSRSRSRSRS SR  +R
Sbjct: 1021 DFSNRSRGRSYSRSPERVRTWGYSRSRSRSRSRSGSRSSRSWSRSRSRSRSRSWSRRYSR 1070

[Close]

BLAST of MS008218 vs. ExPASy Swiss-Prot
Match: Q9SQV1 (DEAD-box ATP-dependent RNA helicase 40 OS=Arabidopsis thaliana OX=3702 GN=RH40 PE=2 SV=1)

HSP 1 Score: 951.0 bits (2457), Expect = 1.1e-275
Identity = 631/1110 (56.85%), Postives = 723/1110 (65.14%), Query Frame = 0


Query: 9    METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 68
            M T E  P S GPRYAP+DPTLP+PWKGLIDGSTG+LYYWNPETNVTQYE+P S PPP  
Sbjct: 1    MATTEDTPASAGPRYAPEDPTLPQPWKGLIDGSTGILYYWNPETNVTQYERP-SAPPP-- 60

Query: 69   LGPHPSASTSKPASIPEAHSMPTNGTLTPHGQPNHHVPQQEGQSNSQLSQQPGHLISQQH 128
                 SA+T K A IP    +P++G              Q  Q+  + ++  GH +SQQH
Sbjct: 61   ----HSATTPKLAQIP----VPSSG--------------QGHQAQHEQAKPVGH-VSQQH 120

Query: 129  SSVTGQVNVNHHPGMQMAPDGRQHSAQPNQVMQQPGMFAMSSQHLGQQHVMQQGQKM-AH 188
                         G Q          QP Q   Q     M  QH  QQ   Q GQ+    
Sbjct: 121  -------------GFQQ---------QPQQFPSQHVRPQMMQQHPAQQMPQQSGQQFPQQ 180

Query: 189  TNQQMAQHPPNQQVLQNPGQQIPQPSIQNIGQPNMQNQTPLVGQPQGPQYGQQQLQYMGY 248
             +Q M  HP       +P  Q  QP+ Q   Q  MQNQ   + Q    QY   Q  YMG+
Sbjct: 181  QSQSMVPHPHG-----HPSVQTYQPTTQQ-QQQGMQNQHSQMPQQLSHQYAHSQQHYMGF 240

Query: 249  QQSVHPSVQQNSQQQVKQSPLGQPFVNHLEQKSGFLNREEDNLQSGNQVGFSSSQFQQSG 308
            +  +     QNS Q  +  P GQ F +  E  S    RE D    G + GFS      S 
Sbjct: 241  RPHMQTQGLQNSHQTPQGGPHGQQFPSQQEYNSLAPKREGDEFHGGKKTGFSQPHLPNSE 300

Query: 309  GTSSIHNLHPGTNSSQMQQFGLATDQARHFGGSPGNMQQQHSVVQLQHAGTELTHRQHHS 368
             + S +       +SQ     LA   A+   G   N     +V Q Q  G  L H+Q   
Sbjct: 301  RSPSQNTHFEANAASQKTNANLA--MAQKCNGPQANA----AVTQFQQPGANLIHQQLGP 360

Query: 369  RFQDQMGPAVM---------QGQQAGAENLPGRAGNEFYFG-RNEGPGTGPHQPRLAAIP 428
            R  +QM   ++         Q       NL  R GN+ Y   R E P  G      AA+P
Sbjct: 361  RAPNQMDQTMLHQKSHVSPFQSNNTYENNLQSRPGNDSYVNMRMEVPVRGAQPLHPAAMP 420

Query: 429  MARSQQETRMGGVPFPSVAPGHPSGTNFAAGHS-HSMYSHGSGGPSLPNNALIGPPHVGA 488
                 ++ R+ G        G P+  + A G + H  Y H   GP+ PN +L+ P  V +
Sbjct: 421  -----KDIRISG--------GPPTNADPAMGQTGHGTYGH--AGPAFPNKSLVRPHFVTS 480

Query: 489  SDVTNMSPVEVYRQQHEVTATGDNVPAPFMTFEATGFPPELLREAIYISIYMPQIYSAGF 548
             DV ++SPVE+YR+QHEVT TG+N+PAP++TFE++G PPE+LRE          + SAGF
Sbjct: 481  PDVPHLSPVEIYRKQHEVTTTGENIPAPYITFESSGLPPEILRE----------LLSAGF 540

Query: 549  SSPTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFILLRQCRNNPQNGPTVLVLAP 608
             SPTPIQAQTWPIALQ RDIVAIAKTGSGKTLGYLIPAFILLR CRN+ +NGPTVL+LAP
Sbjct: 541  PSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFILLRHCRNDSRNGPTVLILAP 600

Query: 609  TRELATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMK 668
            TRELATQIQDEA++FGRSSR+ CTCLYGGAPKGPQLKEL+RGADIVVATPGRLNDILEMK
Sbjct: 601  TRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMK 660

Query: 669  MINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLV 728
            MI+F+QVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIA+DLLV
Sbjct: 661  MIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLV 720

Query: 729  NSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQ 788
            N VQVNIG VDELAANKAITQYVEVVPQMEK+RRLEQILRSQERGSKVIIFCSTKRLCD 
Sbjct: 721  NPVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQILRSQERGSKVIIFCSTKRLCDH 780

Query: 789  LARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYD 848
            LAR++GR FGA  IHGDK+QGERDWVLNQFRSGKS +L+ATDVAARGLDIKDIRVVINYD
Sbjct: 781  LARSVGRHFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVINYD 840

Query: 849  FPTGIEDYVHRIGRTGRAGATGVAYTFFSEQDWKYAADLIKVLEGADQHVPPELRDMAMR 908
            FPTG+EDYVHRIGRTGRAGATGVA+TFF+EQDWKYA DLIKVLEGA+Q VPP++RD+AMR
Sbjct: 841  FPTGVEDYVHRIGRTGRAGATGVAFTFFTEQDWKYAPDLIKVLEGANQQVPPQVRDIAMR 900

Query: 909  ----GGPSFGKDRGGM-GRFDAGMGGSRWDSGGRGGMRDGGFGGRG---GARDGGFGGRG 968
                GGP + +DR GM  RFD+G GG+RWDSGG  G R GGF GR    G R+GGFGG  
Sbjct: 901  GGGGGGPGYSQDRRGMVNRFDSGGGGTRWDSGGGFGGRGGGFSGREGGFGGREGGFGG-- 960

Query: 969  GMRDGGFGGRGNMRDGGAAGGRGGRGDFFPGRGNRGRGFGGPPGGHVGWGRGDRGGPHDR 1028
              R+GGFGGRG        G  G R D F   GNRGRGF GP  GH+  G     G    
Sbjct: 961  --REGGFGGRG--------GRFGMRDDSFGRGGNRGRGFTGPDAGHMNVGGRGGFGRFGN 1012

Query: 1029 YNSVDGRGRGRGQGRFDSR--RDFSNRSRGRSYSRSPE----RVRTWGYSRSRSRSGSRS 1088
             N+++ RG GRG GR   R    F NR RGRS SRSP+    R R+  YSRSRSRSGS S
Sbjct: 1021 NNNMESRGFGRGSGRGFGRGVGRFDNR-RGRSRSRSPDLVRPRRRSSSYSRSRSRSGSYS 1012

[Close]

BLAST of MS008218 vs. ExPASy Swiss-Prot
Match: Q9LYJ9 (DEAD-box ATP-dependent RNA helicase 46 OS=Arabidopsis thaliana OX=3702 GN=RH46 PE=2 SV=2)

HSP 1 Score: 653.3 bits (1684), Expect = 4.9e-186
Identity = 379/618 (61.33%), Postives = 446/618 (72.17%), Query Frame = 0


Query: 411  PRLAAIPMARSQQETRMGGVPF-----------PSVAPGHPSGTNF-AAGHSHSMYSH-- 470
            P+LAAIP++ S Q  +     F            S  P   SG+ F  AG +  + S+  
Sbjct: 53   PKLAAIPVSSSVQTNQQSSSGFNSGKEDDKYGRGSDGPKSDSGSRFNEAGRTGPISSNDA 112

Query: 471  --GSGGPSLPNNALIGPPHVGASDVTNMSPVEVYRQQHEVTATGDNVPAPFMTFEATGFP 530
              G G  S   ++  GPP   A +   +SP E Y ++HE+T +G  VP P M+FEATG P
Sbjct: 113  ASGLGNASSGGSSARGPPSSAAGN--ELSP-EAYCRKHEITVSGGQVPPPLMSFEATGLP 172

Query: 531  PELLREAIYISIYMPQIYSAGFSSPTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPA 590
             ELLRE          +YSAGFS+P+PIQAQ+WPIA+Q RDIVAIAKTGSGKTLGYLIP 
Sbjct: 173  NELLRE----------VYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPG 232

Query: 591  FILLRQCRNNPQNGPTVLVLAPTRELATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKE 650
            F+ L++  N+ + GPT+LVL+PTRELATQIQ EA+KFG+SS++ C CLYGGAPKGPQLKE
Sbjct: 233  FMHLQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKE 292

Query: 651  LDRGADIVVATPGRLNDILEMKMINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRR 710
            ++RG DIVVATPGRLNDILEMK I+  QVS LVLDEADRMLDMGFEPQIRKIVNE+P +R
Sbjct: 293  IERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKR 352

Query: 711  QTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQI 770
            QTLMYTATWPKEVRKIA DLLVN  QVNIG+VDEL ANK+ITQ +EV+  MEK  RLEQI
Sbjct: 353  QTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQI 412

Query: 771  LRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPIL 830
            LRSQE GSK+IIFCSTKR+CDQLARNL R FGAAAIHGDKSQ ERD VLNQFRSG++P+L
Sbjct: 413  LRSQEPGSKIIIFCSTKRMCDQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVL 472

Query: 831  VATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTFFSEQDWKYAAD 890
            VATDVAARGLD+KDIRVV+NYDFP G+EDYVHRIGRTGRAGATG+AYTFF +QD K+A+D
Sbjct: 473  VATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHASD 532

Query: 891  LIKVLEGADQHVPPELRDMAMRGGPSFGKDRGGMGRFDAGMGGSRWDSGGRGGMRDGGFG 950
            LIK+LEGA+Q VPP++R+MA RGG       GGM +F      S    GGRGG  D G+G
Sbjct: 533  LIKILEGANQKVPPQVREMATRGG-------GGMNKFRRWGTPSSGGGGGRGGYGDSGYG 592

Query: 951  GRGGARDGGFGGRGGMRDGGFGGRGNMRDGGAAGGRGGRGDFFPGRGNRGRGFGGPPGGH 1006
            GRG   + G+G RG   D G+GGRG+          GGRG + P R + G          
Sbjct: 593  GRG---ESGYGSRG---DSGYGGRGD---------SGGRGSWAPSRDSSGSS-------- 626

HSP 2 Score: 85.9 bits (211), Expect = 3.1e-15
Identity = 41/71 (57.75%), Postives = 48/71 (67.61%), Query Frame = 0


Query: 22 RYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLPLGPHPSASTSKPA 81
          RYAP+DP LPKPWKGL+D  TG LY+WNPETNVTQYE+P S  PP            K A
Sbjct: 9  RYAPEDPNLPKPWKGLVDSRTGYLYFWNPETNVTQYERPASSAPP------------KLA 67

Query: 82 SIPEAHSMPTN 93
          +IP + S+ TN
Sbjct: 69 AIPVSSSVQTN 67

[Close]

BLAST of MS008218 vs. ExPASy Swiss-Prot
Match: Q8H136 (DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana OX=3702 GN=RH14 PE=1 SV=2)

HSP 1 Score: 652.5 bits (1682), Expect = 8.3e-186
Identity = 351/514 (68.29%), Postives = 406/514 (78.99%), Query Frame = 0


Query: 448 GHSHSMYSHGSG---GPSLPNNALIGPPHVGASDVTNMSPVEVYRQQHEVTATGDNVPAP 507
           G S   YS+G+    G S    A    P   ++  + +SP E Y ++HE+T +G  VP P
Sbjct: 98  GRSGPPYSNGAANGVGDSAYGAASTRVPLPSSAPASELSP-EAYSRRHEITVSGGQVPPP 157

Query: 508 FMTFEATGFPPELLREAIYISIYMPQIYSAGFSSPTPIQAQTWPIALQGRDIVAIAKTGS 567
            M+FEATGFPPELLRE          + SAGFS+PTPIQAQ+WPIA+QGRDIVAIAKTGS
Sbjct: 158 LMSFEATGFPPELLRE----------VLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGS 217

Query: 568 GKTLGYLIPAFILLRQCRNNPQNGPTVLVLAPTRELATQIQDEAIKFGRSSRVCCTCLYG 627
           GKTLGYLIP F+ L++ RN+ + GPT+LVL+PTRELATQIQ+EA+KFGRSSR+ CTCLYG
Sbjct: 218 GKTLGYLIPGFLHLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYG 277

Query: 628 GAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSLLVLDEADRMLDMGFEPQIR 687
           GAPKGPQL++L+RGADIVVATPGRLNDILEM+ I+ RQ+S LVLDEADRMLDMGFEPQIR
Sbjct: 278 GAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIR 337

Query: 688 KIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDELAANKAITQYVEVVPQ 747
           KIV EIP +RQTLMYTATWPK VRKIA DLLVN  QVNIG+VDEL ANK+ITQ++EVV  
Sbjct: 338 KIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAP 397

Query: 748 MEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAAAIHGDKSQGERDWVLN 807
           MEKQRRLEQILRSQE GSKVIIFCSTKR+CDQL RNL R FGAAAIHGDKSQ ERD VLN
Sbjct: 398 MEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLN 457

Query: 808 QFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTFF 867
           QFRSG++P+LVATDVAARGLD+KDIR V+NYDFP G+EDYVHRIGRTGRAGATG A+TFF
Sbjct: 458 QFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFF 517

Query: 868 SEQDWKYAADLIKVLEGADQHVPPELRDMAMRGGPSFGKDRGGMGRFDAGMGGSRW--DS 927
            +QD K+A+DLIK+LEGA+Q VPP++R+MA RGG       GGM +F      SRW   S
Sbjct: 518 GDQDSKHASDLIKILEGANQRVPPQIREMATRGG-------GGMNKF------SRWGPPS 577

Query: 928 GGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFG 957
           GGRG   D G+GGR     G F  R      G+G
Sbjct: 578 GGRGRGGDSGYGGR-----GSFASRDSRSSNGWG 582

HSP 2 Score: 82.8 bits (203), Expect = 2.6e-14
Identity = 43/70 (61.43%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 22 RYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPV-SLPPPLPLGPHPSASTSKP 81
          RYAP+D TLPKPWKGLID  TG LY+WNPETNVTQYEKP  SLPP     P  S S+S  
Sbjct: 11 RYAPEDHTLPKPWKGLIDDRTGYLYFWNPETNVTQYEKPTPSLPP--KFSPAVSVSSSVQ 70

Query: 82 ASIPEAHSMP 91
              +A++ P
Sbjct: 71 VQQTDAYAPP 78

[Close]

BLAST of MS008218 vs. ExPASy Swiss-Prot
Match: P46942 (ATP-dependent RNA helicase-like protein DB10 OS=Nicotiana sylvestris OX=4096 PE=2 SV=1)

HSP 1 Score: 635.6 bits (1638), Expect = 1.1e-180
Identity = 355/522 (68.01%), Postives = 409/522 (78.35%), Query Frame = 0


Query: 438 GHPSGTNFAAGHSHSMYSHGSGGPSLPNNALIGPPHVGASDVTNMSPVEVYRQQHEVTAT 497
           GH  G+N     S S   H   G S+      G   VG SD++     E Y +++E++ T
Sbjct: 86  GHNRGSNNKIARSSSDRFH--DGTSVHEG--YGSLGVG-SDISQ----ESYCRRNEISVT 145

Query: 498 GDNVPAPFMTFEATGFPPELLREAIYISIYMPQIYSAGFSSPTPIQAQTWPIALQGRDIV 557
           G +VPAP  +FEATGFP E++RE          ++ AGFS+PTPIQAQ+WPIALQGRDIV
Sbjct: 146 GGDVPAPLTSFEATGFPSEIVRE----------MHQAGFSAPTPIQAQSWPIALQGRDIV 205

Query: 558 AIAKTGSGKTLGYLIPAFILLRQCRNNPQNGPTVLVLAPTRELATQIQDEAIKFGRSSRV 617
           AIAKTGSGKTLGYL+PAFI L+Q R NPQ GPT+LVL+PTRELATQIQ EA+KFG+SSR+
Sbjct: 206 AIAKTGSGKTLGYLMPAFIHLQQRRKNPQLGPTILVLSPTRELATQIQAEAVKFGKSSRI 265

Query: 618 CCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSLLVLDEADRMLDM 677
            CTCLYGGAPKGPQL+EL RG DIVVATPGRLNDILEM+ ++  QVS LVLDEADRMLDM
Sbjct: 266 SCTCLYGGAPKGPQLRELSRGVDIVVATPGRLNDILEMRRVSLGQVSYLVLDEADRMLDM 325

Query: 678 GFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDELAANKAITQ 737
           GFEPQIRKIV E+P +RQTLMYTATWPK VRKIA DLLVNSVQVNIG+VDEL ANK+ITQ
Sbjct: 326 GFEPQIRKIVKEVPVQRQTLMYTATWPKGVRKIAADLLVNSVQVNIGNVDELVANKSITQ 385

Query: 738 YVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAAAIHGDKSQG 797
           ++EVV  MEKQRR+EQILRS+E GSK+IIFCSTK++CDQL+RNL R FGAAAIHGDKSQG
Sbjct: 386 HIEVVLPMEKQRRVEQILRSKEPGSKIIIFCSTKKMCDQLSRNLTRNFGAAAIHGDKSQG 445

Query: 798 ERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGAT 857
           ERD+VL+QFR+G+SP+LVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGA+
Sbjct: 446 ERDYVLSQFRAGRSPVLVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGAS 505

Query: 858 GVAYTFFSEQDWKYAADLIKVLEGADQHVPPELRDMAMRGGPSFGKDRGGMGRFDAGMGG 917
           G+AYTFFS+QD K+A DL+KVLEGA+Q VP ELRDMA RG        GGMGR     G 
Sbjct: 506 GLAYTFFSDQDSKHALDLVKVLEGANQCVPTELRDMASRG--------GGMGRARNHWGS 565

Query: 918 SRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRG 960
                GGRGG  +  + G    R+GG G   G RD    G G
Sbjct: 566 GPGGRGGRGGPYNSSYVG----RNGGHGYDRGSRDSDRYGHG 576

HSP 2 Score: 84.7 bits (208), Expect = 6.9e-15
Identity = 39/69 (56.52%), Postives = 48/69 (69.57%), Query Frame = 0


Query: 18 SLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLPLGPHP---- 77
          S GP YAP+DPTLPKPWKGL+DG+TG +Y+WNPETN TQYE+PV     +    H     
Sbjct: 8  SAGPSYAPEDPTLPKPWKGLVDGTTGFIYFWNPETNDTQYERPVPSSHAVSAPAHKSSVF 67

Query: 78 -SASTSKPA 82
           S+S  KP+
Sbjct: 68 VSSSVEKPS 76

[Close]

BLAST of MS008218 vs. ExPASy Swiss-Prot
Match: Q5JKF2 (DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0549400 PE=2 SV=2)

HSP 1 Score: 624.8 bits (1610), Expect = 1.9e-177
Identity = 378/601 (62.90%), Postives = 432/601 (71.88%), Query Frame = 0


Query: 486  EVYRQQHEVTATGDNVPAPFMTFEATGFPPELLREAIYISIYMPQIYSAGFSSPTPIQAQ 545
            E YR +HE+T  GDNVPAP  +FE  GFPPE+L+E          I  AGFSSPTPIQAQ
Sbjct: 130  EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKE----------IQRAGFSSPTPIQAQ 189

Query: 546  TWPIALQGRDIVAIAKTGSGKTLGYLIPAFILLRQCRNNPQNGPTVLVLAPTRELATQIQ 605
            +WPIALQ +D+VAIAKTGSGKTLGYL+P F+ +++ +NNP++GPTVLVLAPTRELATQI 
Sbjct: 190  SWPIALQCQDVVAIAKTGSGKTLGYLLPGFMHIKRLQNNPRSGPTVLVLAPTRELATQIL 249

Query: 606  DEAIKFGRSSRVCCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSL 665
            +EA+KFGRSSR+  TCLYGGAPKGPQL++LDRG D+VVATPGRLNDILEM+ I+ +QVS 
Sbjct: 250  EEAVKFGRSSRISSTCLYGGAPKGPQLRDLDRGVDVVVATPGRLNDILEMRRISLKQVSY 309

Query: 666  LVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGS 725
            LVLDEADRMLDMGFEPQIRKIV EIPPRRQTLMYTATWPKEVR+IA DLLV+ VQV IGS
Sbjct: 310  LVLDEADRMLDMGFEPQIRKIVKEIPPRRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGS 369

Query: 726  VDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGF 785
            VDEL AN AITQ VE++   EK RRLEQILRSQ+ GSKV+IFC+TKR+CDQLAR L R F
Sbjct: 370  VDELVANSAITQNVELITPSEKLRRLEQILRSQDSGSKVLIFCTTKRMCDQLARTLTRQF 429

Query: 786  GAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYV 845
            GA+AIHGDKSQ ER+ VL+ FRSG+SPILVATDVAARGLDIKDIRVVINYDFPTGIEDYV
Sbjct: 430  GASAIHGDKSQSEREKVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYV 489

Query: 846  HRIGRTGRAGATGVAYTFFSEQDWKYAADLIKVLEGADQHVPPELRDMAMRGGPSFGKDR 905
            HRIGRTGRAGATGVAYTFF +QD KYAADLIK+LEGA+Q VP +L DMA RGG      R
Sbjct: 490  HRIGRTGRAGATGVAYTFFCDQDSKYAADLIKILEGANQRVPRDLADMASRGG------R 549

Query: 906  GGMGRFDAGMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGNMRDGG 965
            GG  R       +R D GG     D  +GGR G                           
Sbjct: 550  GGRKR---NRWATRSDRGGSHSELDSRYGGRDG--------------------------- 609

Query: 966  AAGGRGGRGDFFPGRGNRGRGFGGPPGGHVGWGRGDRGGPHDRYNSVDGRGRGRGQGRFD 1025
               G  GR D    R +R   +G                        DGR R  G+GR  
Sbjct: 610  -LSGSSGRLD--SSRSSRRHDYGD-----------------------DGRSRRSGRGRSR 651

Query: 1026 SRRDFSNRSRGRSYSRSPERVRTWGYSRSRSRSGSRSRSSRSWSRSRSRSRSRSRSRSRT 1085
            SR    +RS    YSRSP+R R   +SRSR+RS SRSR SRS++R+R  SRSRSRS   +
Sbjct: 670  SR----SRSDSDRYSRSPKRSRR--HSRSRTRSRSRSR-SRSYTRNRRASRSRSRSPGAS 651

Query: 1086 R 1087
            R
Sbjct: 730  R 651

HSP 2 Score: 97.8 bits (242), Expect = 7.9e-19
Identity = 43/60 (71.67%), Postives = 49/60 (81.67%), Query Frame = 0


Query: 21 PRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPV----SLPPPLPLGPHPSAS 77
          PRYAPDDP+LPKPW+GL+DG+TG LYYWNPETN+TQYEKP+     LPPP PL P P  S
Sbjct: 10 PRYAPDDPSLPKPWRGLVDGTTGYLYYWNPETNITQYEKPLPPEDQLPPPPPLPPPPPRS 69

[Close]

BLAST of MS008218 vs. ExPASy TrEMBL
Match: A0A6J1C7W7 (DEAD-box ATP-dependent RNA helicase 46 OS=Momordica charantia OX=3673 GN=LOC111009186 PE=4 SV=1)

HSP 1 Score: 2048.5 bits (5306), Expect = 0.0e+00
Identity = 1063/1080 (98.43%), Postives = 1065/1080 (98.61%), Query Frame = 0


Query: 9    METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 68
            METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1    METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60

Query: 69   LGPHPSASTSKPASIPEAHSMPTNGTLTPHGQPNHHVPQQEGQSNSQLSQQPGHLISQQH 128
            LGPHPSASTSKPASIPEAHSMPTNGTLTPHGQPNHHVPQQEGQSNSQLSQQPGHLISQQH
Sbjct: 61   LGPHPSASTSKPASIPEAHSMPTNGTLTPHGQPNHHVPQQEGQSNSQLSQQPGHLISQQH 120

Query: 129  SSVTGQVNVNHHPGMQMAPDGRQHSAQPNQVMQQPGMFAMSSQHLGQQHVMQQGQKMAHT 188
            SSVTG VNVNHHPGMQMAPDGRQHSAQPNQVMQQPGMFAMSSQHLGQQHVMQQ QKMAH 
Sbjct: 121  SSVTGHVNVNHHPGMQMAPDGRQHSAQPNQVMQQPGMFAMSSQHLGQQHVMQQSQKMAHK 180

Query: 189  NQQMAQHPPNQQVLQNPGQQIPQPSIQNIGQPNMQNQTPLVGQPQGPQYGQQQLQYMGYQ 248
            NQQMAQHPPNQQVLQNPGQQIPQPSIQN+GQPNMQNQTPLVGQPQGPQYGQQQLQYMGYQ
Sbjct: 181  NQQMAQHPPNQQVLQNPGQQIPQPSIQNLGQPNMQNQTPLVGQPQGPQYGQQQLQYMGYQ 240

Query: 249  QSVHPSVQQNSQQQVKQSPLGQPFVNHLEQKSGFLNREEDNLQSGNQVGFSSSQFQQSGG 308
            QSVHPSVQQNSQQQVKQSPLGQPFVNHLEQKSGFLNREEDNLQSGNQVGFSSSQFQQSGG
Sbjct: 241  QSVHPSVQQNSQQQVKQSPLGQPFVNHLEQKSGFLNREEDNLQSGNQVGFSSSQFQQSGG 300

Query: 309  TSSIHNLHPGTNSSQMQQFGLATDQARHFGGSPGNMQQQHSVVQLQHAGTELTHRQHHSR 368
            TSSIHNLHPGTNSSQMQQFGLATDQARHFGGSPGN+QQQHSVVQLQHAGTELTHRQHHSR
Sbjct: 301  TSSIHNLHPGTNSSQMQQFGLATDQARHFGGSPGNLQQQHSVVQLQHAGTELTHRQHHSR 360

Query: 369  FQDQMGPAVMQGQQAGAENLPGRAGNEFYFGRNEGPGTGPHQPRLAAIPMARSQQETRMG 428
            FQDQMGPAVMQGQQAGAENLPGRAGNEFYFGRNEGPGTGPHQPRLAAIPMARSQQETRMG
Sbjct: 361  FQDQMGPAVMQGQQAGAENLPGRAGNEFYFGRNEGPGTGPHQPRLAAIPMARSQQETRMG 420

Query: 429  GVPFPSVAPGHPSGTNFAAGHSHSMYSHGSGGPSLPNNALIGPPHVGASDVTNMSPVEVY 488
            GVPFPSVAPGHPSGTNFAAGHSHSMYSHGSGGPSLPNNALIGPPHV ASDVTNMSPVEVY
Sbjct: 421  GVPFPSVAPGHPSGTNFAAGHSHSMYSHGSGGPSLPNNALIGPPHVVASDVTNMSPVEVY 480

Query: 489  RQQHEVTATGDNVPAPFMTFEATGFPPELLREAIYISIYMPQIYSAGFSSPTPIQAQTWP 548
            RQQHEVTATGDNVPAPFMTFEATGFPPELLRE          IYSAGFSSPTPIQAQTWP
Sbjct: 481  RQQHEVTATGDNVPAPFMTFEATGFPPELLRE----------IYSAGFSSPTPIQAQTWP 540

Query: 549  IALQGRDIVAIAKTGSGKTLGYLIPAFILLRQCRNNPQNGPTVLVLAPTRELATQIQDEA 608
            IALQGRDIVAIAKTGSGKTLGYLIPAFILLRQCRNNPQNGPTVLVLAPTRELATQIQDEA
Sbjct: 541  IALQGRDIVAIAKTGSGKTLGYLIPAFILLRQCRNNPQNGPTVLVLAPTRELATQIQDEA 600

Query: 609  IKFGRSSRVCCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSLLVL 668
            IKFGRSSRVCCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSLLVL
Sbjct: 601  IKFGRSSRVCCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSLLVL 660

Query: 669  DEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDE 728
            DEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDE
Sbjct: 661  DEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDE 720

Query: 729  LAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAA 788
            LAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAA
Sbjct: 721  LAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAA 780

Query: 789  AIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRI 848
            AIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRI
Sbjct: 781  AIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRI 840

Query: 849  GRTGRAGATGVAYTFFSEQDWKYAADLIKVLEGADQHVPPELRDMAMRGGPSFGKDRGGM 908
            GRTGRAGATGVAYTFFSEQDWKYAADLIKVLEGADQHVPPELRDMAMRGGPSFGKDRGGM
Sbjct: 841  GRTGRAGATGVAYTFFSEQDWKYAADLIKVLEGADQHVPPELRDMAMRGGPSFGKDRGGM 900

Query: 909  GRFDAGMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGNMRDGGAAG 968
            GRFDAGMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGNMRDGGAAG
Sbjct: 901  GRFDAGMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGNMRDGGAAG 960

Query: 969  GRGGRGDFFPGRGNRGRGFGGPPGGHVGWGRGDRGGPHDRYNSVDGRGRGRGQGRFDSRR 1028
            GRGGRGDFFPGRGNRGRGFGGPPGGHVGWGRGDRGGPHDRYNSVDGRGRGRGQGRFDSRR
Sbjct: 961  GRGGRGDFFPGRGNRGRGFGGPPGGHVGWGRGDRGGPHDRYNSVDGRGRGRGQGRFDSRR 1020

Query: 1029 DFSNRSRGRSYSRSPERVRTWGYSRSRSRSGSRSRSSRSWSRSRSRSRSRSRSRSRTRSR 1088
            DFSNRSRGRSYSRSPERVRTWGYSRSRSRSGS SRSSRSWSRSRSRSRSRSRSRSRTRSR
Sbjct: 1021 DFSNRSRGRSYSRSPERVRTWGYSRSRSRSGSHSRSSRSWSRSRSRSRSRSRSRSRTRSR 1070

[Close]

BLAST of MS008218 vs. ExPASy TrEMBL
Match: A0A6J1HIK1 (DEAD-box ATP-dependent RNA helicase 40-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111464240 PE=4 SV=1)

HSP 1 Score: 1865.5 bits (4831), Expect = 0.0e+00
Identity = 975/1082 (90.11%), Postives = 1013/1082 (93.62%), Query Frame = 0


Query: 9    METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 68
            METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1    METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60

Query: 69   LGPHPSASTSKPASIPEAHSMPTNGTLTPHGQPNHHVPQQEGQSNSQLSQQPGHLISQQH 128
            L PHPSASTSKP SIPE HSMP+NGTLTPH Q NHHVPQQEGQSNSQLSQQPGHL+SQQH
Sbjct: 61   LAPHPSASTSKPTSIPEGHSMPSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQH 120

Query: 129  SSVTGQVNVNHHPGMQMAPDGRQHSAQPNQVMQQPGMFAMSSQHLGQQHVMQQGQKMAHT 188
            SSV GQ  VNHHP MQMAPDGRQHS QPNQV+QQ GMF MS QH+GQQ VM QGQKMAH 
Sbjct: 121  SSVAGQAIVNHHPSMQMAPDGRQHSLQPNQVLQQQGMFPMSLQHIGQQQVMHQGQKMAHA 180

Query: 189  NQQMAQHPPNQQVLQNPGQQIPQPSIQNIGQPNMQNQTPLVGQPQGPQYGQQQLQYMGYQ 248
            NQQ++QH PNQQ LQN GQQIPQPSIQ++GQPNMQNQTPLVGQPQGPQYGQQ  QYMGYQ
Sbjct: 181  NQQISQH-PNQQPLQNTGQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQHPQYMGYQ 240

Query: 249  QSVHPSVQQNSQQQVKQSPLGQPFVNHLEQKSGFLNREEDNLQSGNQVGFSSSQFQQSGG 308
            QSVHPSVQQNSQQQV++SPLGQPF NHLEQKS F  REEDN+QSGNQ+GFS+SQFQQSGG
Sbjct: 241  QSVHPSVQQNSQQQVQKSPLGQPFGNHLEQKSAFQKREEDNIQSGNQIGFSTSQFQQSGG 300

Query: 309  TSSIHNLHPGTNSSQMQQFGLATDQARHFGGSPGNMQQQHSVVQLQHAGTELTHRQHHSR 368
            TSSIH++HPGTNSSQMQQ+GL +DQAR FGGSPGNMQQ H VVQLQH+GTELTHRQHHSR
Sbjct: 301  TSSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSR 360

Query: 369  FQDQMGPAVMQGQQAGAENLPGRAGNEFYFGRNEGPGTGPHQPRLAAIPMARSQQETRMG 428
            FQD MGPA MQ +QAG+ENLPGRAGNE++FGRNEGPG GPHQPRLAAIPMARSQQ+ RM 
Sbjct: 361  FQDPMGPAAMQEKQAGSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMARSQQDARMS 420

Query: 429  GVPFPSVAPGHPSGTNFAAGHSHSMYSHGSGGPSLPNNALIGPPHVGASDVTNMSPVEVY 488
            GVPFPS AP HPSGT+FAAG SH+MY+HGSGGPSL NNAL+GPPH+GASDVTNMSPVEVY
Sbjct: 421  GVPFPSAAPSHPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVY 480

Query: 489  RQQHEVTATGDNVPAPFMTFEATGFPPELLREAIYISIYMPQIYSAGFSSPTPIQAQTWP 548
            RQQHEVTATGDNVPAPFMTFEATGFPPE+LRE          IYSAGFSSPTPIQAQTWP
Sbjct: 481  RQQHEVTATGDNVPAPFMTFEATGFPPEILRE----------IYSAGFSSPTPIQAQTWP 540

Query: 549  IALQGRDIVAIAKTGSGKTLGYLIPAFILLRQCRNNPQNGPTVLVLAPTRELATQIQDEA 608
            IALQGRDIVAIAKTGSGKTLGYLIPAF+LLRQCRNNPQNGPTVLVLAPTRELATQIQDEA
Sbjct: 541  IALQGRDIVAIAKTGSGKTLGYLIPAFVLLRQCRNNPQNGPTVLVLAPTRELATQIQDEA 600

Query: 609  IKFGRSSRVCCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSLLVL 668
            IKFGR+SR+CCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSLLVL
Sbjct: 601  IKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSLLVL 660

Query: 669  DEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDE 728
            DEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDE
Sbjct: 661  DEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDE 720

Query: 729  LAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAA 788
            LAANKAITQYVE VPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAA
Sbjct: 721  LAANKAITQYVEFVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAA 780

Query: 789  AIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRI 848
            AIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVIN+DFPTGIEDYVHRI
Sbjct: 781  AIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINFDFPTGIEDYVHRI 840

Query: 849  GRTGRAGATGVAYTFFSEQDWKYAADLIKVLEGADQHVPPELRDMAMRGGPSFGKDRGGM 908
            GRTGRAGATG+AYTFF EQDWKYAADLIKVLEGADQ VPPELRDMAMRGGPSFGKDRG +
Sbjct: 841  GRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRDMAMRGGPSFGKDRGAL 900

Query: 909  GRFDAGMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGNMRDGGAAG 968
            GRFDA MGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRG MRD G AG
Sbjct: 901  GRFDAAMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGGMRD-GLAG 960

Query: 969  GRGGRGDFFPGRGNRGRGFGGPPGGHVGWGRGDRGGPHDRYNSVDGRGRGRGQGRFDSRR 1028
            GRGGRGDFF GRG  GR FGGPPGGHVGW RGDRGGP DRY+SVDGRGRGRGQGRFD+RR
Sbjct: 961  GRGGRGDFFSGRGRGGRAFGGPPGGHVGWARGDRGGPQDRYSSVDGRGRGRGQGRFDNRR 1020

Query: 1029 DFSNRSRGRSYSRSPERVRTWGYSRSRSRSGSR--SRSSRSWSRSRSRSRSRSRSRSRTR 1088
            DFSNRSRGRSYSRSPERVRTWGYSRSRSRS SR  SRSSRSWSRSRSRSRSRS SR  +R
Sbjct: 1021 DFSNRSRGRSYSRSPERVRTWGYSRSRSRSRSRSGSRSSRSWSRSRSRSRSRSWSRRYSR 1070

[Close]

BLAST of MS008218 vs. ExPASy TrEMBL
Match: A0A6J1HMJ4 (DEAD-box ATP-dependent RNA helicase 40-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464240 PE=4 SV=1)

HSP 1 Score: 1862.8 bits (4824), Expect = 0.0e+00
Identity = 976/1092 (89.38%), Postives = 1014/1092 (92.86%), Query Frame = 0


Query: 9    METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 68
            METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1    METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60

Query: 69   LGPHPSASTSKPASIPEAHSMPTNGTLTPHGQPNHHVPQQEGQSNSQLSQQPGHLISQQH 128
            L PHPSASTSKP SIPE HSMP+NGTLTPH Q NHHVPQQEGQSNSQLSQQPGHL+SQQH
Sbjct: 61   LAPHPSASTSKPTSIPEGHSMPSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQH 120

Query: 129  SSVTGQVNVNHHPGMQMAPDGRQHSAQPNQVMQQPGMFAMSSQHLGQQHVMQQGQKMAHT 188
            SSV GQ  VNHHP MQMAPDGRQHS QPNQV+QQ GMF MS QH+GQQ VM QGQKMAH 
Sbjct: 121  SSVAGQAIVNHHPSMQMAPDGRQHSLQPNQVLQQQGMFPMSLQHIGQQQVMHQGQKMAHA 180

Query: 189  NQQMAQHPPNQQVLQNPGQQIPQPSIQNIGQPNMQNQTPLVGQPQGPQYGQQQLQYMGYQ 248
            NQQ++QH PNQQ LQN GQQIPQPSIQ++GQPNMQNQTPLVGQPQGPQYGQQ  QYMGYQ
Sbjct: 181  NQQISQH-PNQQPLQNTGQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQHPQYMGYQ 240

Query: 249  QSVHPSVQQNSQQQVKQSPLGQPFVNHLEQKSGFLNREEDNLQSGNQVGFSSSQFQQSGG 308
            QSVHPSVQQNSQQQV++SPLGQPF NHLEQKS F  REEDN+QSGNQ+GFS+SQFQQSGG
Sbjct: 241  QSVHPSVQQNSQQQVQKSPLGQPFGNHLEQKSAFQKREEDNIQSGNQIGFSTSQFQQSGG 300

Query: 309  TSSIHNLHPGTNSSQMQQFGLATDQARHFGGSPGNMQQQHSVVQLQHAGTELTHRQHHSR 368
            TSSIH++HPGTNSSQMQQ+GL +DQAR FGGSPGNMQQ H VVQLQH+GTELTHRQHHSR
Sbjct: 301  TSSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSR 360

Query: 369  FQDQMGPAVMQGQQAGAENLPGRAGNEFYFGRNEGPGTGPHQPRLAAIPMARSQQETRMG 428
            FQD MGPA MQ +QAG+ENLPGRAGNE++FGRNEGPG GPHQPRLAAIPMARSQQ+ RM 
Sbjct: 361  FQDPMGPAAMQEKQAGSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMARSQQDARMS 420

Query: 429  GVPFPSVAPGHPSGTNFAAGHSHSMYSHGSGGPSLPNNALIGPPHVGASDVTNMSPVEVY 488
            GVPFPS AP HPSGT+FAAG SH+MY+HGSGGPSL NNAL+GPPH+GASDVTNMSPVEVY
Sbjct: 421  GVPFPSAAPSHPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVY 480

Query: 489  RQQHEVTATGDNVPAPFMTFEATGFPPELLREAIYISIYMPQIYSAGFSSPTPIQAQTWP 548
            RQQHEVTATGDNVPAPFMTFEATGFPPE+LRE          IYSAGFSSPTPIQAQTWP
Sbjct: 481  RQQHEVTATGDNVPAPFMTFEATGFPPEILRE----------IYSAGFSSPTPIQAQTWP 540

Query: 549  IALQGRDIVAIAKTGSGKTLGYLIPAFILLRQCRNNPQNGPTVLVLAPTRELATQIQDEA 608
            IALQGRDIVAIAKTGSGKTLGYLIPAF+LLRQCRNNPQNGPTVLVLAPTRELATQIQDEA
Sbjct: 541  IALQGRDIVAIAKTGSGKTLGYLIPAFVLLRQCRNNPQNGPTVLVLAPTRELATQIQDEA 600

Query: 609  IKFGRSSRVCCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSLLVL 668
            IKFGR+SR+CCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSLLVL
Sbjct: 601  IKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSLLVL 660

Query: 669  DEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDE 728
            DEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDE
Sbjct: 661  DEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDE 720

Query: 729  LAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAA 788
            LAANKAITQYVE VPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAA
Sbjct: 721  LAANKAITQYVEFVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAA 780

Query: 789  AIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRI 848
            AIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVIN+DFPTGIEDYVHRI
Sbjct: 781  AIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINFDFPTGIEDYVHRI 840

Query: 849  GRTGRAGATGVAYTFFSEQDWKYAADLIKVLEGADQHVPPELRDMAMRGGPSFGKDRGGM 908
            GRTGRAGATG+AYTFF EQDWKYAADLIKVLEGADQ VPPELRDMAMRGGPSFGKDRG +
Sbjct: 841  GRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRDMAMRGGPSFGKDRGAL 900

Query: 909  GRFDAGMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGNMRDG---- 968
            GRFDA MGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRG MRDG    
Sbjct: 901  GRFDAAMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGGMRDGGFGG 960

Query: 969  ------GAAGGRGGRGDFFPGRGNRGRGFGGPPGGHVGWGRGDRGGPHDRYNSVDGRGRG 1028
                  G AGGRGGRGDFF GRG  GR FGGPPGGHVGW RGDRGGP DRY+SVDGRGRG
Sbjct: 961  RGGMRDGLAGGRGGRGDFFSGRGRGGRAFGGPPGGHVGWARGDRGGPQDRYSSVDGRGRG 1020

Query: 1029 RGQGRFDSRRDFSNRSRGRSYSRSPERVRTWGYSRSRSRSGSR--SRSSRSWSRSRSRSR 1088
            RGQGRFD+RRDFSNRSRGRSYSRSPERVRTWGYSRSRSRS SR  SRSSRSWSRSRSRSR
Sbjct: 1021 RGQGRFDNRRDFSNRSRGRSYSRSPERVRTWGYSRSRSRSRSRSGSRSSRSWSRSRSRSR 1080

[Close]

BLAST of MS008218 vs. ExPASy TrEMBL
Match: A0A6J1GU57 (DEAD-box ATP-dependent RNA helicase 40-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457571 PE=4 SV=1)

HSP 1 Score: 1856.6 bits (4808), Expect = 0.0e+00
Identity = 979/1090 (89.82%), Postives = 1017/1090 (93.30%), Query Frame = 0


Query: 9    METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 68
            METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1    METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60

Query: 69   LGPHPSASTSKPASIPEAHSMPTNGTLTPHGQPNHHVPQQEGQSNSQLSQQPGHLISQQH 128
            LGPHP  S+SKP S+ EAHSMP+NG LTPH Q NHHVPQQEGQSNSQLSQQPGHL+SQQH
Sbjct: 61   LGPHPGVSSSKPTSVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQH 120

Query: 129  SSVTGQVNVNHHPGMQMAPDGRQHSAQPNQVMQQPGMFAMSSQHLGQQHVMQQGQKMAHT 188
            SSV GQ  VNHHPG+QMAPDGRQ+S+Q NQVMQQ G+FAMSS HLGQQ VM QGQKMAH 
Sbjct: 121  SSVAGQATVNHHPGLQMAPDGRQNSSQSNQVMQQQGLFAMSSPHLGQQQVMHQGQKMAHA 180

Query: 189  NQQMAQHPPNQ------QVLQNPGQQIPQPSIQNIGQPNMQNQTPLVGQPQG--PQYGQQ 248
            N QM+QHP  Q      Q LQNPGQQIPQPSIQ++GQP+MQNQTPLVGQPQG  PQYGQQ
Sbjct: 181  NPQMSQHPNQQPPQNPGQPLQNPGQQIPQPSIQHLGQPSMQNQTPLVGQPQGPQPQYGQQ 240

Query: 249  QLQYMGYQQSVHPSVQQNSQQQVKQSPLGQPFVNHLEQKSGFLNREEDNLQSGNQVGFSS 308
            QLQY+GYQQSVHPSVQ N QQQV+QSPLGQPF NHLEQKS FL REEDN+QSGNQVGFSS
Sbjct: 241  QLQYIGYQQSVHPSVQHNLQQQVQQSPLGQPFGNHLEQKSAFLKREEDNIQSGNQVGFSS 300

Query: 309  SQFQQSGGTSSIHNLHPGTNSSQMQQFGLATDQARHFGGSPGNMQQQHSVVQLQHAGTEL 368
            SQF+QSGGTSSIHNLHPGTNSSQMQQFG A+DQAR FGGSPGN+QQQ+ VVQLQHAGTEL
Sbjct: 301  SQFEQSGGTSSIHNLHPGTNSSQMQQFGSASDQARQFGGSPGNIQQQNPVVQLQHAGTEL 360

Query: 369  THRQHHSRFQDQMGPAVMQGQQAGAENLPGRAGNEFYFGRNEGPGTGPHQPRLAAIPMAR 428
             HRQHHSRFQDQM PAVMQGQQ  AENLPGRAGNE+YFGRNEGPG GP QPRLAAIPMAR
Sbjct: 361  AHRQHHSRFQDQMSPAVMQGQQTSAENLPGRAGNEYYFGRNEGPGVGPLQPRLAAIPMAR 420

Query: 429  SQQETRMGGVPFPSVAPGHPSGTNFAAGHSHSMYSHGSGGPSLPNNALIGPPHVGASDVT 488
            SQQ+TRM GV FP+ APGHPSGTNFAAGHSH+MYSHGSGGP L NNALIGPPH+GASDVT
Sbjct: 421  SQQDTRMSGVSFPTAAPGHPSGTNFAAGHSHNMYSHGSGGPPLSNNALIGPPHIGASDVT 480

Query: 489  NMSPVEVYRQQHEVTATGDNVPAPFMTFEATGFPPELLREAIYISIYMPQIYSAGFSSPT 548
            NMSPVEVYRQQHEVTATGDNVP+P+MTFEATGFPPE+LRE          IYSAGFSSPT
Sbjct: 481  NMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFPPEILRE----------IYSAGFSSPT 540

Query: 549  PIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFILLRQCRNNPQNGPTVLVLAPTREL 608
            PIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAF+LLRQCRNNPQNGPTVLVLAPTREL
Sbjct: 541  PIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTREL 600

Query: 609  ATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINF 668
            ATQIQDEAIKFGRSSR+CCTCLYGGAPKGPQLKEL+RGADIVVATPGRLNDILEMKMI F
Sbjct: 601  ATQIQDEAIKFGRSSRICCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIKF 660

Query: 669  RQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQ 728
            RQ+SLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQ
Sbjct: 661  RQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQ 720

Query: 729  VNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARN 788
            VNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLAR+
Sbjct: 721  VNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARS 780

Query: 789  LGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTG 848
            LGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTG
Sbjct: 781  LGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTG 840

Query: 849  IEDYVHRIGRTGRAGATGVAYTFFSEQDWKYAADLIKVLEGADQHVPPELRDMAMRGGPS 908
            +EDYVHRIGRTGRAGATGVAYTFF+EQDWKYAADLIK+LEGADQHVP ELRDMAMRGGPS
Sbjct: 841  VEDYVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGADQHVPAELRDMAMRGGPS 900

Query: 909  FGKDRGGMGRFDAGMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGN 968
            FGKDRGGMGRFDA MGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGN
Sbjct: 901  FGKDRGGMGRFDAVMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGN 960

Query: 969  MRDGGAAGGRGGRGDFFPGRGNRGRGFGGPPGGHVGWGR-GDRGGPHDRYNSVDGRGRGR 1028
            MRD G AGGRGGRGDFF  RG RGRGFGGP GGHVGWGR GDRGGPHDR++SVDGRGRGR
Sbjct: 961  MRD-GTAGGRGGRGDFFSTRG-RGRGFGGPAGGHVGWGRGGDRGGPHDRFSSVDGRGRGR 1020

Query: 1029 GQGRFDSRRDFSNRSRGRSYSRSPERVRTWGYSRSRSRSGSRSRSSRSWSRSRSR-SRSR 1088
            GQ RFD+R DFSNRSRGRSYSRSPERVRTWGYSRSRSRSGSRSRSSRSWSRSRSR SRSR
Sbjct: 1021 GQSRFDNRNDFSNRSRGRSYSRSPERVRTWGYSRSRSRSGSRSRSSRSWSRSRSRSSRSR 1078

[Close]

BLAST of MS008218 vs. ExPASy TrEMBL
Match: A0A6J1GUA0 (DEAD-box ATP-dependent RNA helicase 40-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457571 PE=4 SV=1)

HSP 1 Score: 1856.6 bits (4808), Expect = 0.0e+00
Identity = 979/1090 (89.82%), Postives = 1017/1090 (93.30%), Query Frame = 0


Query: 9    METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 68
            METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1    METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60

Query: 69   LGPHPSASTSKPASIPEAHSMPTNGTLTPHGQPNHHVPQQEGQSNSQLSQQPGHLISQQH 128
            LGPHP  S+SKP S+ EAHSMP+NG LTPH Q NHHVPQQEGQSNSQLSQQPGHL+SQQH
Sbjct: 61   LGPHPGVSSSKPTSVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQH 120

Query: 129  SSVTGQVNVNHHPGMQMAPDGRQHSAQPNQVMQQPGMFAMSSQHLGQQHVMQQGQKMAHT 188
            SSV GQ  VNHHPG+QMAPDGRQ+S+Q NQVMQQ G+FAMSS HLGQQ VM QGQKMAH 
Sbjct: 121  SSVAGQATVNHHPGLQMAPDGRQNSSQSNQVMQQQGLFAMSSPHLGQQQVMHQGQKMAHA 180

Query: 189  NQQMAQHPPNQ------QVLQNPGQQIPQPSIQNIGQPNMQNQTPLVGQPQG--PQYGQQ 248
            N QM+QHP  Q      Q LQNPGQQIPQPSIQ++GQP+MQNQTPLVGQPQG  PQYGQQ
Sbjct: 181  NPQMSQHPNQQPPQNPGQPLQNPGQQIPQPSIQHLGQPSMQNQTPLVGQPQGPQPQYGQQ 240

Query: 249  QLQYMGYQQSVHPSVQQNSQQQVKQSPLGQPFVNHLEQKSGFLNREEDNLQSGNQVGFSS 308
            QLQY+GYQQSVHPSVQ N QQQV+QSPLGQPF NHLEQKS FL REEDN+QSGNQVGFSS
Sbjct: 241  QLQYIGYQQSVHPSVQHNLQQQVQQSPLGQPFGNHLEQKSAFLKREEDNIQSGNQVGFSS 300

Query: 309  SQFQQSGGTSSIHNLHPGTNSSQMQQFGLATDQARHFGGSPGNMQQQHSVVQLQHAGTEL 368
            SQF+QSGGTSSIHNLHPGTNSSQMQQFG A+DQAR FGGSPGN+QQQ+ VVQLQHAGTEL
Sbjct: 301  SQFEQSGGTSSIHNLHPGTNSSQMQQFGSASDQARQFGGSPGNIQQQNPVVQLQHAGTEL 360

Query: 369  THRQHHSRFQDQMGPAVMQGQQAGAENLPGRAGNEFYFGRNEGPGTGPHQPRLAAIPMAR 428
             HRQHHSRFQDQM PAVMQGQQ  AENLPGRAGNE+YFGRNEGPG GP QPRLAAIPMAR
Sbjct: 361  AHRQHHSRFQDQMSPAVMQGQQTSAENLPGRAGNEYYFGRNEGPGVGPLQPRLAAIPMAR 420

Query: 429  SQQETRMGGVPFPSVAPGHPSGTNFAAGHSHSMYSHGSGGPSLPNNALIGPPHVGASDVT 488
            SQQ+TRM GV FP+ APGHPSGTNFAAGHSH+MYSHGSGGP L NNALIGPPH+GASDVT
Sbjct: 421  SQQDTRMSGVSFPTAAPGHPSGTNFAAGHSHNMYSHGSGGPPLSNNALIGPPHIGASDVT 480

Query: 489  NMSPVEVYRQQHEVTATGDNVPAPFMTFEATGFPPELLREAIYISIYMPQIYSAGFSSPT 548
            NMSPVEVYRQQHEVTATGDNVP+P+MTFEATGFPPE+LRE          IYSAGFSSPT
Sbjct: 481  NMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFPPEILRE----------IYSAGFSSPT 540

Query: 549  PIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFILLRQCRNNPQNGPTVLVLAPTREL 608
            PIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAF+LLRQCRNNPQNGPTVLVLAPTREL
Sbjct: 541  PIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTREL 600

Query: 609  ATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINF 668
            ATQIQDEAIKFGRSSR+CCTCLYGGAPKGPQLKEL+RGADIVVATPGRLNDILEMKMI F
Sbjct: 601  ATQIQDEAIKFGRSSRICCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIKF 660

Query: 669  RQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQ 728
            RQ+SLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQ
Sbjct: 661  RQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQ 720

Query: 729  VNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARN 788
            VNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLAR+
Sbjct: 721  VNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARS 780

Query: 789  LGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTG 848
            LGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTG
Sbjct: 781  LGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTG 840

Query: 849  IEDYVHRIGRTGRAGATGVAYTFFSEQDWKYAADLIKVLEGADQHVPPELRDMAMRGGPS 908
            +EDYVHRIGRTGRAGATGVAYTFF+EQDWKYAADLIK+LEGADQHVP ELRDMAMRGGPS
Sbjct: 841  VEDYVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGADQHVPAELRDMAMRGGPS 900

Query: 909  FGKDRGGMGRFDAGMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGN 968
            FGKDRGGMGRFDA MGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGN
Sbjct: 901  FGKDRGGMGRFDAVMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGN 960

Query: 969  MRDGGAAGGRGGRGDFFPGRGNRGRGFGGPPGGHVGWGR-GDRGGPHDRYNSVDGRGRGR 1028
            MRD G AGGRGGRGDFF  RG RGRGFGGP GGHVGWGR GDRGGPHDR++SVDGRGRGR
Sbjct: 961  MRD-GTAGGRGGRGDFFSTRG-RGRGFGGPAGGHVGWGRGGDRGGPHDRFSSVDGRGRGR 1020

Query: 1029 GQGRFDSRRDFSNRSRGRSYSRSPERVRTWGYSRSRSRSGSRSRSSRSWSRSRSR-SRSR 1088
            GQ RFD+R DFSNRSRGRSYSRSPERVRTWGYSRSRSRSGSRSRSSRSWSRSRSR SRSR
Sbjct: 1021 GQSRFDNRNDFSNRSRGRSYSRSPERVRTWGYSRSRSRSGSRSRSSRSWSRSRSRSSRSR 1078

[Close]

BLAST of MS008218 vs. TAIR 10
Match: AT3G06480.1 (DEAD box RNA helicase family protein )

HSP 1 Score: 951.0 bits (2457), Expect = 8.0e-277
Identity = 631/1110 (56.85%), Postives = 723/1110 (65.14%), Query Frame = 0


Query: 9    METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 68
            M T E  P S GPRYAP+DPTLP+PWKGLIDGSTG+LYYWNPETNVTQYE+P S PPP  
Sbjct: 1    MATTEDTPASAGPRYAPEDPTLPQPWKGLIDGSTGILYYWNPETNVTQYERP-SAPPP-- 60

Query: 69   LGPHPSASTSKPASIPEAHSMPTNGTLTPHGQPNHHVPQQEGQSNSQLSQQPGHLISQQH 128
                 SA+T K A IP    +P++G              Q  Q+  + ++  GH +SQQH
Sbjct: 61   ----HSATTPKLAQIP----VPSSG--------------QGHQAQHEQAKPVGH-VSQQH 120

Query: 129  SSVTGQVNVNHHPGMQMAPDGRQHSAQPNQVMQQPGMFAMSSQHLGQQHVMQQGQKM-AH 188
                         G Q          QP Q   Q     M  QH  QQ   Q GQ+    
Sbjct: 121  -------------GFQQ---------QPQQFPSQHVRPQMMQQHPAQQMPQQSGQQFPQQ 180

Query: 189  TNQQMAQHPPNQQVLQNPGQQIPQPSIQNIGQPNMQNQTPLVGQPQGPQYGQQQLQYMGY 248
             +Q M  HP       +P  Q  QP+ Q   Q  MQNQ   + Q    QY   Q  YMG+
Sbjct: 181  QSQSMVPHPHG-----HPSVQTYQPTTQQ-QQQGMQNQHSQMPQQLSHQYAHSQQHYMGF 240

Query: 249  QQSVHPSVQQNSQQQVKQSPLGQPFVNHLEQKSGFLNREEDNLQSGNQVGFSSSQFQQSG 308
            +  +     QNS Q  +  P GQ F +  E  S    RE D    G + GFS      S 
Sbjct: 241  RPHMQTQGLQNSHQTPQGGPHGQQFPSQQEYNSLAPKREGDEFHGGKKTGFSQPHLPNSE 300

Query: 309  GTSSIHNLHPGTNSSQMQQFGLATDQARHFGGSPGNMQQQHSVVQLQHAGTELTHRQHHS 368
             + S +       +SQ     LA   A+   G   N     +V Q Q  G  L H+Q   
Sbjct: 301  RSPSQNTHFEANAASQKTNANLA--MAQKCNGPQANA----AVTQFQQPGANLIHQQLGP 360

Query: 369  RFQDQMGPAVM---------QGQQAGAENLPGRAGNEFYFG-RNEGPGTGPHQPRLAAIP 428
            R  +QM   ++         Q       NL  R GN+ Y   R E P  G      AA+P
Sbjct: 361  RAPNQMDQTMLHQKSHVSPFQSNNTYENNLQSRPGNDSYVNMRMEVPVRGAQPLHPAAMP 420

Query: 429  MARSQQETRMGGVPFPSVAPGHPSGTNFAAGHS-HSMYSHGSGGPSLPNNALIGPPHVGA 488
                 ++ R+ G        G P+  + A G + H  Y H   GP+ PN +L+ P  V +
Sbjct: 421  -----KDIRISG--------GPPTNADPAMGQTGHGTYGH--AGPAFPNKSLVRPHFVTS 480

Query: 489  SDVTNMSPVEVYRQQHEVTATGDNVPAPFMTFEATGFPPELLREAIYISIYMPQIYSAGF 548
             DV ++SPVE+YR+QHEVT TG+N+PAP++TFE++G PPE+LRE          + SAGF
Sbjct: 481  PDVPHLSPVEIYRKQHEVTTTGENIPAPYITFESSGLPPEILRE----------LLSAGF 540

Query: 549  SSPTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFILLRQCRNNPQNGPTVLVLAP 608
             SPTPIQAQTWPIALQ RDIVAIAKTGSGKTLGYLIPAFILLR CRN+ +NGPTVL+LAP
Sbjct: 541  PSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFILLRHCRNDSRNGPTVLILAP 600

Query: 609  TRELATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMK 668
            TRELATQIQDEA++FGRSSR+ CTCLYGGAPKGPQLKEL+RGADIVVATPGRLNDILEMK
Sbjct: 601  TRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMK 660

Query: 669  MINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLV 728
            MI+F+QVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIA+DLLV
Sbjct: 661  MIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLV 720

Query: 729  NSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQ 788
            N VQVNIG VDELAANKAITQYVEVVPQMEK+RRLEQILRSQERGSKVIIFCSTKRLCD 
Sbjct: 721  NPVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQILRSQERGSKVIIFCSTKRLCDH 780

Query: 789  LARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYD 848
            LAR++GR FGA  IHGDK+QGERDWVLNQFRSGKS +L+ATDVAARGLDIKDIRVVINYD
Sbjct: 781  LARSVGRHFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVINYD 840

Query: 849  FPTGIEDYVHRIGRTGRAGATGVAYTFFSEQDWKYAADLIKVLEGADQHVPPELRDMAMR 908
            FPTG+EDYVHRIGRTGRAGATGVA+TFF+EQDWKYA DLIKVLEGA+Q VPP++RD+AMR
Sbjct: 841  FPTGVEDYVHRIGRTGRAGATGVAFTFFTEQDWKYAPDLIKVLEGANQQVPPQVRDIAMR 900

Query: 909  ----GGPSFGKDRGGM-GRFDAGMGGSRWDSGGRGGMRDGGFGGRG---GARDGGFGGRG 968
                GGP + +DR GM  RFD+G GG+RWDSGG  G R GGF GR    G R+GGFGG  
Sbjct: 901  GGGGGGPGYSQDRRGMVNRFDSGGGGTRWDSGGGFGGRGGGFSGREGGFGGREGGFGG-- 960

Query: 969  GMRDGGFGGRGNMRDGGAAGGRGGRGDFFPGRGNRGRGFGGPPGGHVGWGRGDRGGPHDR 1028
              R+GGFGGRG        G  G R D F   GNRGRGF GP  GH+  G     G    
Sbjct: 961  --REGGFGGRG--------GRFGMRDDSFGRGGNRGRGFTGPDAGHMNVGGRGGFGRFGN 1012

Query: 1029 YNSVDGRGRGRGQGRFDSR--RDFSNRSRGRSYSRSPE----RVRTWGYSRSRSRSGSRS 1088
             N+++ RG GRG GR   R    F NR RGRS SRSP+    R R+  YSRSRSRSGS S
Sbjct: 1021 NNNMESRGFGRGSGRGFGRGVGRFDNR-RGRSRSRSPDLVRPRRRSSSYSRSRSRSGSYS 1012

[Close]

BLAST of MS008218 vs. TAIR 10
Match: AT3G01540.1 (DEAD box RNA helicase 1 )

HSP 1 Score: 654.4 bits (1687), Expect = 1.6e-187
Identity = 352/512 (68.75%), Postives = 408/512 (79.69%), Query Frame = 0


Query: 448 GHSHSMYSHGSG---GPSLPNNALIGPPHVGASDVTNMSPVEVYRQQHEVTATGDNVPAP 507
           G S   YS+G+    G S    A    P   ++  + +SP E Y ++HE+T +G  VP P
Sbjct: 98  GRSGPPYSNGAANGVGDSAYGAASTRVPLPSSAPASELSP-EAYSRRHEITVSGGQVPPP 157

Query: 508 FMTFEATGFPPELLREAIYISIYMPQIYSAGFSSPTPIQAQTWPIALQGRDIVAIAKTGS 567
            M+FEATGFPPELLRE          + SAGFS+PTPIQAQ+WPIA+QGRDIVAIAKTGS
Sbjct: 158 LMSFEATGFPPELLRE----------VLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGS 217

Query: 568 GKTLGYLIPAFILLRQCRNNPQNGPTVLVLAPTRELATQIQDEAIKFGRSSRVCCTCLYG 627
           GKTLGYLIP F+ L++ RN+ + GPT+LVL+PTRELATQIQ+EA+KFGRSSR+ CTCLYG
Sbjct: 218 GKTLGYLIPGFLHLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYG 277

Query: 628 GAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSLLVLDEADRMLDMGFEPQIR 687
           GAPKGPQL++L+RGADIVVATPGRLNDILEM+ I+ RQ+S LVLDEADRMLDMGFEPQIR
Sbjct: 278 GAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIR 337

Query: 688 KIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDELAANKAITQYVEVVPQ 747
           KIV EIP +RQTLMYTATWPK VRKIA DLLVN  QVNIG+VDEL ANK+ITQ++EVV  
Sbjct: 338 KIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAP 397

Query: 748 MEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAAAIHGDKSQGERDWVLN 807
           MEKQRRLEQILRSQE GSKVIIFCSTKR+CDQL RNL R FGAAAIHGDKSQ ERD VLN
Sbjct: 398 MEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLN 457

Query: 808 QFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTFF 867
           QFRSG++P+LVATDVAARGLD+KDIR V+NYDFP G+EDYVHRIGRTGRAGATG A+TFF
Sbjct: 458 QFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFF 517

Query: 868 SEQDWKYAADLIKVLEGADQHVPPELRDMAMRGGPSFGKDRGGMGRFDAGMGGSRW--DS 927
            +QD K+A+DLIK+LEGA+Q VPP++R+MA RGG       GGM +F      SRW   S
Sbjct: 518 GDQDSKHASDLIKILEGANQRVPPQIREMATRGG-------GGMNKF------SRWGPPS 577

Query: 928 GGRGGMRDGGFGGRG--GARDGGFGGRGGMRD 953
           GGRG   D G+GGRG   +RD    G G  R+
Sbjct: 578 GGRGRGGDSGYGGRGSFASRDRSSNGWGRERE 585

HSP 2 Score: 82.8 bits (203), Expect = 1.9e-15
Identity = 43/70 (61.43%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 22 RYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPV-SLPPPLPLGPHPSASTSKP 81
          RYAP+D TLPKPWKGLID  TG LY+WNPETNVTQYEKP  SLPP     P  S S+S  
Sbjct: 11 RYAPEDHTLPKPWKGLIDDRTGYLYFWNPETNVTQYEKPTPSLPP--KFSPAVSVSSSVQ 70

Query: 82 ASIPEAHSMP 91
              +A++ P
Sbjct: 71 VQQTDAYAPP 78

[Close]

BLAST of MS008218 vs. TAIR 10
Match: AT5G14610.2 (DEAD box RNA helicase family protein )

HSP 1 Score: 653.3 bits (1684), Expect = 3.5e-187
Identity = 379/618 (61.33%), Postives = 446/618 (72.17%), Query Frame = 0


Query: 411  PRLAAIPMARSQQETRMGGVPF-----------PSVAPGHPSGTNF-AAGHSHSMYSH-- 470
            P+LAAIP++ S Q  +     F            S  P   SG+ F  AG +  + S+  
Sbjct: 53   PKLAAIPVSSSVQTNQQSSSGFNSGKEDDKYGRGSDGPKSDSGSRFNEAGRTGPISSNDA 112

Query: 471  --GSGGPSLPNNALIGPPHVGASDVTNMSPVEVYRQQHEVTATGDNVPAPFMTFEATGFP 530
              G G  S   ++  GPP   A +   +SP E Y ++HE+T +G  VP P M+FEATG P
Sbjct: 113  ASGLGNASSGGSSARGPPSSAAGN--ELSP-EAYCRKHEITVSGGQVPPPLMSFEATGLP 172

Query: 531  PELLREAIYISIYMPQIYSAGFSSPTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPA 590
             ELLRE          +YSAGFS+P+PIQAQ+WPIA+Q RDIVAIAKTGSGKTLGYLIP 
Sbjct: 173  NELLRE----------VYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPG 232

Query: 591  FILLRQCRNNPQNGPTVLVLAPTRELATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKE 650
            F+ L++  N+ + GPT+LVL+PTRELATQIQ EA+KFG+SS++ C CLYGGAPKGPQLKE
Sbjct: 233  FMHLQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKE 292

Query: 651  LDRGADIVVATPGRLNDILEMKMINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRR 710
            ++RG DIVVATPGRLNDILEMK I+  QVS LVLDEADRMLDMGFEPQIRKIVNE+P +R
Sbjct: 293  IERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKR 352

Query: 711  QTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQI 770
            QTLMYTATWPKEVRKIA DLLVN  QVNIG+VDEL ANK+ITQ +EV+  MEK  RLEQI
Sbjct: 353  QTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQI 412

Query: 771  LRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPIL 830
            LRSQE GSK+IIFCSTKR+CDQLARNL R FGAAAIHGDKSQ ERD VLNQFRSG++P+L
Sbjct: 413  LRSQEPGSKIIIFCSTKRMCDQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVL 472

Query: 831  VATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTFFSEQDWKYAAD 890
            VATDVAARGLD+KDIRVV+NYDFP G+EDYVHRIGRTGRAGATG+AYTFF +QD K+A+D
Sbjct: 473  VATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHASD 532

Query: 891  LIKVLEGADQHVPPELRDMAMRGGPSFGKDRGGMGRFDAGMGGSRWDSGGRGGMRDGGFG 950
            LIK+LEGA+Q VPP++R+MA RGG       GGM +F      S    GGRGG  D G+G
Sbjct: 533  LIKILEGANQKVPPQVREMATRGG-------GGMNKFRRWGTPSSGGGGGRGGYGDSGYG 592

Query: 951  GRGGARDGGFGGRGGMRDGGFGGRGNMRDGGAAGGRGGRGDFFPGRGNRGRGFGGPPGGH 1006
            GRG   + G+G RG   D G+GGRG+          GGRG + P R + G          
Sbjct: 593  GRG---ESGYGSRG---DSGYGGRGD---------SGGRGSWAPSRDSSGSS-------- 626

HSP 2 Score: 85.9 bits (211), Expect = 2.2e-16
Identity = 41/71 (57.75%), Postives = 48/71 (67.61%), Query Frame = 0


Query: 22 RYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLPLGPHPSASTSKPA 81
          RYAP+DP LPKPWKGL+D  TG LY+WNPETNVTQYE+P S  PP            K A
Sbjct: 9  RYAPEDPNLPKPWKGLVDSRTGYLYFWNPETNVTQYERPASSAPP------------KLA 67

Query: 82 SIPEAHSMPTN 93
          +IP + S+ TN
Sbjct: 69 AIPVSSSVQTN 67

[Close]

BLAST of MS008218 vs. TAIR 10
Match: AT3G01540.2 (DEAD box RNA helicase 1 )

HSP 1 Score: 652.5 bits (1682), Expect = 5.9e-187
Identity = 351/514 (68.29%), Postives = 406/514 (78.99%), Query Frame = 0


Query: 448 GHSHSMYSHGSG---GPSLPNNALIGPPHVGASDVTNMSPVEVYRQQHEVTATGDNVPAP 507
           G S   YS+G+    G S    A    P   ++  + +SP E Y ++HE+T +G  VP P
Sbjct: 98  GRSGPPYSNGAANGVGDSAYGAASTRVPLPSSAPASELSP-EAYSRRHEITVSGGQVPPP 157

Query: 508 FMTFEATGFPPELLREAIYISIYMPQIYSAGFSSPTPIQAQTWPIALQGRDIVAIAKTGS 567
            M+FEATGFPPELLRE          + SAGFS+PTPIQAQ+WPIA+QGRDIVAIAKTGS
Sbjct: 158 LMSFEATGFPPELLRE----------VLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGS 217

Query: 568 GKTLGYLIPAFILLRQCRNNPQNGPTVLVLAPTRELATQIQDEAIKFGRSSRVCCTCLYG 627
           GKTLGYLIP F+ L++ RN+ + GPT+LVL+PTRELATQIQ+EA+KFGRSSR+ CTCLYG
Sbjct: 218 GKTLGYLIPGFLHLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYG 277

Query: 628 GAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSLLVLDEADRMLDMGFEPQIR 687
           GAPKGPQL++L+RGADIVVATPGRLNDILEM+ I+ RQ+S LVLDEADRMLDMGFEPQIR
Sbjct: 278 GAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIR 337

Query: 688 KIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDELAANKAITQYVEVVPQ 747
           KIV EIP +RQTLMYTATWPK VRKIA DLLVN  QVNIG+VDEL ANK+ITQ++EVV  
Sbjct: 338 KIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAP 397

Query: 748 MEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAAAIHGDKSQGERDWVLN 807
           MEKQRRLEQILRSQE GSKVIIFCSTKR+CDQL RNL R FGAAAIHGDKSQ ERD VLN
Sbjct: 398 MEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLN 457

Query: 808 QFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTFF 867
           QFRSG++P+LVATDVAARGLD+KDIR V+NYDFP G+EDYVHRIGRTGRAGATG A+TFF
Sbjct: 458 QFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFF 517

Query: 868 SEQDWKYAADLIKVLEGADQHVPPELRDMAMRGGPSFGKDRGGMGRFDAGMGGSRW--DS 927
            +QD K+A+DLIK+LEGA+Q VPP++R+MA RGG       GGM +F      SRW   S
Sbjct: 518 GDQDSKHASDLIKILEGANQRVPPQIREMATRGG-------GGMNKF------SRWGPPS 577

Query: 928 GGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFG 957
           GGRG   D G+GGR     G F  R      G+G
Sbjct: 578 GGRGRGGDSGYGGR-----GSFASRDSRSSNGWG 582

HSP 2 Score: 82.8 bits (203), Expect = 1.9e-15
Identity = 43/70 (61.43%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 22 RYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPV-SLPPPLPLGPHPSASTSKP 81
          RYAP+D TLPKPWKGLID  TG LY+WNPETNVTQYEKP  SLPP     P  S S+S  
Sbjct: 11 RYAPEDHTLPKPWKGLIDDRTGYLYFWNPETNVTQYEKPTPSLPP--KFSPAVSVSSSVQ 70

Query: 82 ASIPEAHSMP 91
              +A++ P
Sbjct: 71 VQQTDAYAPP 78

[Close]

BLAST of MS008218 vs. TAIR 10
Match: AT3G01540.3 (DEAD box RNA helicase 1 )

HSP 1 Score: 652.5 bits (1682), Expect = 5.9e-187
Identity = 351/514 (68.29%), Postives = 406/514 (78.99%), Query Frame = 0


Query: 448 GHSHSMYSHGSG---GPSLPNNALIGPPHVGASDVTNMSPVEVYRQQHEVTATGDNVPAP 507
           G S   YS+G+    G S    A    P   ++  + +SP E Y ++HE+T +G  VP P
Sbjct: 98  GRSGPPYSNGAANGVGDSAYGAASTRVPLPSSAPASELSP-EAYSRRHEITVSGGQVPPP 157

Query: 508 FMTFEATGFPPELLREAIYISIYMPQIYSAGFSSPTPIQAQTWPIALQGRDIVAIAKTGS 567
            M+FEATGFPPELLRE          + SAGFS+PTPIQAQ+WPIA+QGRDIVAIAKTGS
Sbjct: 158 LMSFEATGFPPELLRE----------VLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGS 217

Query: 568 GKTLGYLIPAFILLRQCRNNPQNGPTVLVLAPTRELATQIQDEAIKFGRSSRVCCTCLYG 627
           GKTLGYLIP F+ L++ RN+ + GPT+LVL+PTRELATQIQ+EA+KFGRSSR+ CTCLYG
Sbjct: 218 GKTLGYLIPGFLHLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYG 277

Query: 628 GAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSLLVLDEADRMLDMGFEPQIR 687
           GAPKGPQL++L+RGADIVVATPGRLNDILEM+ I+ RQ+S LVLDEADRMLDMGFEPQIR
Sbjct: 278 GAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIR 337

Query: 688 KIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDELAANKAITQYVEVVPQ 747
           KIV EIP +RQTLMYTATWPK VRKIA DLLVN  QVNIG+VDEL ANK+ITQ++EVV  
Sbjct: 338 KIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAP 397

Query: 748 MEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAAAIHGDKSQGERDWVLN 807
           MEKQRRLEQILRSQE GSKVIIFCSTKR+CDQL RNL R FGAAAIHGDKSQ ERD VLN
Sbjct: 398 MEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLN 457

Query: 808 QFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTFF 867
           QFRSG++P+LVATDVAARGLD+KDIR V+NYDFP G+EDYVHRIGRTGRAGATG A+TFF
Sbjct: 458 QFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFF 517

Query: 868 SEQDWKYAADLIKVLEGADQHVPPELRDMAMRGGPSFGKDRGGMGRFDAGMGGSRW--DS 927
            +QD K+A+DLIK+LEGA+Q VPP++R+MA RGG       GGM +F      SRW   S
Sbjct: 518 GDQDSKHASDLIKILEGANQRVPPQIREMATRGG-------GGMNKF------SRWGPPS 577

Query: 928 GGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFG 957
           GGRG   D G+GGR     G F  R      G+G
Sbjct: 578 GGRGRGGDSGYGGR-----GSFASRDSRSSNGWG 582

HSP 2 Score: 82.8 bits (203), Expect = 1.9e-15
Identity = 43/70 (61.43%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 22 RYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPV-SLPPPLPLGPHPSASTSKP 81
          RYAP+D TLPKPWKGLID  TG LY+WNPETNVTQYEKP  SLPP     P  S S+S  
Sbjct: 11 RYAPEDHTLPKPWKGLIDDRTGYLYFWNPETNVTQYEKPTPSLPP--KFSPAVSVSSSVQ 70

Query: 82 ASIPEAHSMP 91
              +A++ P
Sbjct: 71 VQQTDAYAPP 78

The following BLAST results are available for this feature:

BLAST of MS008218 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022137851.1	0.0e+00	98.43	DEAD-box ATP-dependent RNA helicase 46 [Momordica charantia]	[more]
XP_023539269.1	0.0e+00	90.91	DEAD-box ATP-dependent RNA helicase 40-like [Cucurbita pepo subsp. pepo] >XP_023...	[more]
KAG6582152.1	0.0e+00	90.27	DEAD-box ATP-dependent RNA helicase 40, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_023527087.1	0.0e+00	90.00	DEAD-box ATP-dependent RNA helicase 40-like [Cucurbita pepo subsp. pepo]	[more]
XP_022964311.1	0.0e+00	90.11	DEAD-box ATP-dependent RNA helicase 40-like isoform X2 [Cucurbita moschata]	[more]

BLAST of MS008218 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SQV1	1.1e-275	56.85	DEAD-box ATP-dependent RNA helicase 40 OS=Arabidopsis thaliana OX=3702 GN=RH40 P...	[more]
Q9LYJ9	4.9e-186	61.33	DEAD-box ATP-dependent RNA helicase 46 OS=Arabidopsis thaliana OX=3702 GN=RH46 P...	[more]
Q8H136	8.3e-186	68.29	DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana OX=3702 GN=RH14 P...	[more]
P46942	1.1e-180	68.01	ATP-dependent RNA helicase-like protein DB10 OS=Nicotiana sylvestris OX=4096 PE=...	[more]
Q5JKF2	1.9e-177	62.90	DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]

BLAST of MS008218 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C7W7	0.0e+00	98.43	DEAD-box ATP-dependent RNA helicase 46 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1HIK1	0.0e+00	90.11	DEAD-box ATP-dependent RNA helicase 40-like isoform X2 OS=Cucurbita moschata OX=...	[more]
A0A6J1HMJ4	0.0e+00	89.38	DEAD-box ATP-dependent RNA helicase 40-like isoform X1 OS=Cucurbita moschata OX=...	[more]
A0A6J1GU57	0.0e+00	89.82	DEAD-box ATP-dependent RNA helicase 40-like isoform X2 OS=Cucurbita moschata OX=...	[more]
A0A6J1GUA0	0.0e+00	89.82	DEAD-box ATP-dependent RNA helicase 40-like isoform X1 OS=Cucurbita moschata OX=...	[more]

BLAST of MS008218 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06480.1	8.0e-277	56.85	DEAD box RNA helicase family protein	[more]
AT3G01540.1	1.6e-187	68.75	DEAD box RNA helicase 1	[more]
AT5G14610.2	3.5e-187	61.33	DEAD box RNA helicase family protein	[more]
AT3G01540.2	5.9e-187	68.29	DEAD box RNA helicase 1	[more]
AT3G01540.3	5.9e-187	68.29	DEAD box RNA helicase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001202	WW domain	SMART	SM00456	ww_5	coord: 29..62 e-value: 6.7E-7 score: 38.9
IPR001202	WW domain	PFAM	PF00397	WW	coord: 30..60 e-value: 1.5E-6 score: 28.1
IPR001202	WW domain	PROSITE	PS01159	WW_DOMAIN_1	coord: 34..60
IPR001202	WW domain	PROSITE	PS50020	WW_DOMAIN_2	coord: 28..62 score: 11.270201
IPR001202	WW domain	CDD	cd00201	WW	coord: 31..59 e-value: 0.00534583 score: 33.6554
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 771..855 e-value: 2.2E-36 score: 136.8
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 747..855 e-value: 1.8E-32 score: 112.0
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 750..894 score: 25.875359
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 535..738 e-value: 5.2E-63 score: 225.3
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 547..721 score: 30.559603
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 480..724 e-value: 1.6E-84 score: 284.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 725..897 e-value: 1.1E-60 score: 206.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 587..872
None	No IPR available	GENE3D	2.20.70.10		coord: 24..62 e-value: 2.1E-5 score: 26.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 915..1088
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1067..1088
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 291..324
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1000..1042
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1045..1066
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..139
None	No IPR available	PANTHER	PTHR47958:SF66	DEAD-BOX ATP-DEPENDENT RNA HELICASE 40	coord: 309..988
None	No IPR available	PANTHER	PTHR47958	ATP-DEPENDENT RNA HELICASE DBP3	coord: 309..988
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 735..864 e-value: 1.57018E-63 score: 209.286
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 540..710 e-value: 2.1E-49 score: 167.6
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 667..675
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 506..544 score: 8.538099
IPR036020	WW domain superfamily	SUPERFAMILY	51045	WW domain	coord: 25..61

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS008218.1	MS008218.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003724	RNA helicase activity