MS007919 (gene) Bitter gourd (TR) v1

Overview


Name	MS007919
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein cornichon homolog 4-like
Location	scaffold13: 2425841 .. 2428010 (+)
RNA-Seq Expression	MS007919
Synteny	MS007919

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGACCTATTTGCTTGGCTCTTCAACTTATTCATCCTTATATTTCTTCTCCTCATTCTTGGCTATCAGGTAATTTTTGTTTCTGTTCGATTTTTCGCTAATGGCTTATAATTTGTGTTTGTGCCTTAAATTTCGATTGCGAAAATCAAGATACGATAGTGAGAAAATGTGTGTAGTAACTGTGAAGAAAAATTGGGAGAAGGAATTTTTGTCGAAGAGGGATTATTTAATTGAAGGATCACAGATTATTGCTTTTGCATAGAGTACTTTCAACATTAGAAATCTGCTCAACACAAACGAAACTAAAGATTATGGACTGAGTTTCTATTGCAGAACATATGCTTGGTGGATTTGGAATCGGACTATATCAACCTCTTCGATTCGACGTCTCGGATAAACAGAGTTGTGTTGCTTGAATTTGTTGCTCAGGCGGTTTTCTGCTTTGTCCATCTTCTAGCACGGCATTGGTTCATGTTTTTGGTGTCTCTTCCTTGCCTATGCTTTAATATCAGACTGTAAGTTCTGCTTTCTTAAATCCAACTCAACTCATAATGCTATGAGAATATACTGAATACTATGAAAATTATGAAAACTGCTTTTTAATATACTGAACCATCATTGTTCTAAAGGAGTTAGGATTAATTGAGAGGGAATGGGTTAAAACTCCATGATGGTCGCCTACTTTAGGAATTAGTAATTTCTATGTGTTTTATGACACAAATTGTTGTAGGGTTAGGCAGTTGCTCAATGAGATTATTAGGTGTACACAAGCTGTTCCAGACACTCATGATGATGAAAGGGAAAGAAAAATTTATTATCAAAAGTTATCTCAAACTCACACTTGACGTTGTTTTTGTTACTGGAAGAATGGCATATGAGATTAAACTGGGTATGAAAGCATGATCTTTCGATACTGATTCTCTTCACCAATTCGTTCATGTGTTAAAACTGTTTGATTGTGATGTTACATTGTGTTTGAAAAATGTTGATTACAGGTTCAAAAGTTAGATGGTTTTTGTATGCTTGGCGTTTCAAAATAAGTTGATTTTGGGGGACAGATGGCTTGAATATTGTAAATTGAAAGTTCAGTATTTAATCTCTGATATAACTTAGGAAGAAATATAATGAAGAACTGTATGAACTGTTCTTTTTCTTTCCAATAAAAGCACTTGAGTGGATTCTGAAGATCTGGTTTCTTTTAGTTTCAGATAAATGTTCAATGGTTTGATTAGGATTTGGTTTTAAAAATGCCTATTTAAGTCATTTTGATTTGTCCAAAGGGGCTAGGGTAATTAAGAGGGAATAGGTTCAAATCCCATGATGACCACCTACCTTATGAATTAGTAATTCCTATGTATTTCCCGGTACCAAATGTTGTAGGGTCAGGCGGTTGTCCCGTGAGATTAGTCGAGGTGCGTGTAAGCTGGTCTGGACACTCACGGATCTAAAATATATATATATATATATATTTCATCGGCCAAAATGGTTTGAGTTTCGAATCCTCACCTCAATGTGTCGTTGAATAAAAAAAAAAAAAGTTTGAAACCATGGTGGGTTGGTTTATTAGTGGTCACTATGACAATTGAAATAGTAGAAGGAACGATGGGGGAATGAGTTCGTTCACCTACCTAAAATATCAAAGTTCTAAAAGCTTTCTAACAACCAAATGTTATATAGTTGGCTTTTGTCCTACAAGGTTAATTGAGGTGTGTGTAAGCTAGTTCAGATACTTATGACTATTATCTTTTATCTTGAGAAAAACTAAGTTAAAACCTATTCTCTTTCGATCAAACTTTTTTTCTGTCAGCGCAGTACACTAGAATTCTGAACACTTGAGCTTCCATGTACTTGATCAAACATAGTCGTCATAGGCGCGGTTTCTTAATTCTAAACCTCGGCTTTCGACTTCATTCTATGGTGTAAATAATTGCAACTTAAAAGCAGAGATAAATCACCTGGGAGGAGGGCTCTTAATTACTTGAGTTGAATTTTGATGGTCACCACTTTCAGGTATGTCAGGAAAGAACACCTTGCAGATGTGACCGAGATCTATAACCAGATTGGCTGGGAGAAAAAGCAGCGGTTTGTGAAGATGGTTTATTTTATCATACTTTCATTCATTTCTTTGATCTGGTACATATATACAGATACTTGTGACACTTCTGGT

mRNA sequence

ATGGGAGACCTATTTGCTTGGCTCTTCAACTTATTCATCCTTATATTTCTTCTCCTCATTCTTGGCTATCAGAACATATGCTTGGTGGATTTGGAATCGGACTATATCAACCTCTTCGATTCGACGTCTCGGATAAACAGAGTTGTGTTGCTTGAATTTGTTGCTCAGGCGGTTTTCTGCTTTGTCCATCTTCTAGCACGGCATTGGTTCATGTTTTTGGTGTCTCTTCCTTGCCTATGCTTTAATATCAGACTGTATGTCAGGAAAGAACACCTTGCAGATGTGACCGAGATCTATAACCAGATTGGCTGGGAGAAAAAGCAGCGGTTTGTGAAGATGGTTTATTTTATCATACTTTCATTCATTTCTTTGATCTGGTACATATATACAGATACTTGTGACACTTCTGGT

Coding sequence (CDS)

ATGGGAGACCTATTTGCTTGGCTCTTCAACTTATTCATCCTTATATTTCTTCTCCTCATTCTTGGCTATCAGAACATATGCTTGGTGGATTTGGAATCGGACTATATCAACCTCTTCGATTCGACGTCTCGGATAAACAGAGTTGTGTTGCTTGAATTTGTTGCTCAGGCGGTTTTCTGCTTTGTCCATCTTCTAGCACGGCATTGGTTCATGTTTTTGGTGTCTCTTCCTTGCCTATGCTTTAATATCAGACTGTATGTCAGGAAAGAACACCTTGCAGATGTGACCGAGATCTATAACCAGATTGGCTGGGAGAAAAAGCAGCGGTTTGTGAAGATGGTTTATTTTATCATACTTTCATTCATTTCTTTGATCTGGTACATATATACAGATACTTGTGACACTTCTGGT

Protein sequence

MGDLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFCFVHLLARHWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQRFVKMVYFIILSFISLIWYIYTDTCDTSG

Homology

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BLAST of MS007919 vs. NCBI nr
Match: XP_022152825.1 (protein cornichon homolog 4-like isoform X1 [Momordica charantia] >XP_022152831.1 protein cornichon homolog 4-like isoform X1 [Momordica charantia])

HSP 1 Score: 248.4 bits (633), Expect = 3.5e-62
Identity = 127/128 (99.22%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 1   MGDLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFC 60
           MGDLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFC
Sbjct: 1   MGDLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFC 60

Query: 61  FVHLLARHWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQRFVKMVYFIILS 120
           FVHLLARHWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQRFVKMVYFIILS
Sbjct: 61  FVHLLARHWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQRFVKMVYFIILS 120

Query: 121 FISLIWYI 129
           FISLIW I
Sbjct: 121 FISLIWMI 128

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BLAST of MS007919 vs. NCBI nr
Match: XP_022152838.1 (protein cornichon homolog 4-like isoform X2 [Momordica charantia] >XP_022152841.1 protein cornichon homolog 4-like isoform X2 [Momordica charantia])

HSP 1 Score: 218.8 bits (556), Expect = 2.9e-53
Identity = 110/114 (96.49%), Postives = 111/114 (97.37%), Query Frame = 0


Query: 1   MGDLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFC 60
           MGDLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFC
Sbjct: 1   MGDLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFC 60

Query: 61  FVHLLARHWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQRFVKMV 115
           FVHLLARHWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQR +  V
Sbjct: 61  FVHLLARHWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQRMISSV 114

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BLAST of MS007919 vs. NCBI nr
Match: XP_008460127.1 (PREDICTED: protein cornichon homolog 4-like isoform X1 [Cucumis melo])

HSP 1 Score: 216.5 bits (550), Expect = 1.5e-52
Identity = 107/128 (83.59%), Postives = 119/128 (92.97%), Query Frame = 0


Query: 1   MGDLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFC 60
           MGDLFAWLFNL +LIFL++ILGYQ ICLVDLESDYINLFDSTSRINRVV+LEF+ Q VF 
Sbjct: 1   MGDLFAWLFNLLLLIFLIVILGYQIICLVDLESDYINLFDSTSRINRVVMLEFITQGVFS 60

Query: 61  FVHLLARHWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQRFVKMVYFIILS 120
           FVHLLARHWFMFLVSLPCL FN+RLY+RKEHLADVTEIYN IG EKKQRF+K++YF++L 
Sbjct: 61  FVHLLARHWFMFLVSLPCLYFNVRLYIRKEHLADVTEIYNHIGCEKKQRFLKIIYFLVLL 120

Query: 121 FISLIWYI 129
           FISLIWYI
Sbjct: 121 FISLIWYI 128

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BLAST of MS007919 vs. NCBI nr
Match: XP_008460129.1 (PREDICTED: protein cornichon homolog 4-like isoform X2 [Cucumis melo])

HSP 1 Score: 213.0 bits (541), Expect = 1.6e-51
Identity = 106/128 (82.81%), Postives = 118/128 (92.19%), Query Frame = 0


Query: 1   MGDLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFC 60
           MGDLFAWLFNL +LIFL++ILGYQ ICLVDLESDYINLFDSTSRINRVV+LEF+ Q VF 
Sbjct: 1   MGDLFAWLFNLLLLIFLIVILGYQIICLVDLESDYINLFDSTSRINRVVMLEFITQGVFS 60

Query: 61  FVHLLARHWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQRFVKMVYFIILS 120
           FVHLLARHWFMFLVSLPCL FN+RLY+RKEHLADVTEIYN IG EKKQRF+K++YF++L 
Sbjct: 61  FVHLLARHWFMFLVSLPCLYFNVRLYIRKEHLADVTEIYNHIGCEKKQRFLKIIYFLVLL 120

Query: 121 FISLIWYI 129
           FISLIW I
Sbjct: 121 FISLIWTI 128

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BLAST of MS007919 vs. NCBI nr
Match: XP_023916255.1 (protein cornichon homolog 4-like [Quercus suber] >XP_023916256.1 protein cornichon homolog 4-like [Quercus suber])

HSP 1 Score: 154.8 bits (390), Expect = 5.2e-34
Identity = 77/130 (59.23%), Postives = 98/130 (75.38%), Query Frame = 0


Query: 1   MGDLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFC 60
           MG L+ WLF+ F ++ LL  +G+Q ICLVDLESDYIN +DS SRIN  VL EF+AQ + C
Sbjct: 1   MGTLWLWLFSFFFILGLLCTIGFQLICLVDLESDYINPYDSASRINSSVLPEFIAQGLLC 60

Query: 61  FVHLLARHWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQRFVKMVYFIILS 120
              LL  +W MFL SLP LC+N+RLYV+++HL DVTEIYNQ+ WEKK RF+K+ Y + L 
Sbjct: 61  LFFLLTGNWVMFLSSLPYLCYNVRLYVKQQHLVDVTEIYNQLRWEKKLRFLKLAYLLFLF 120

Query: 121 FISLIWYIYT 131
           FISL W I++
Sbjct: 121 FISLFWMIWS 130

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BLAST of MS007919 vs. ExPASy Swiss-Prot
Match: Q84W04 (Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.1e-31
Identity = 67/130 (51.54%), Postives = 91/130 (70.00%), Query Frame = 0


Query: 1   MGDLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFC 60
           MGD++ WL + F LI L+ I+ YQ +CL DLE DYIN +DS SRIN VVL EF+ Q V C
Sbjct: 1   MGDIWTWLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLC 60

Query: 61  FVHLLARHWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQRFVKMVYFIILS 120
             +LL  HWFM L+ LP L +N  LY +++HL DVTEI+N + WEKK+R  K+ Y ++  
Sbjct: 61  VFYLLTGHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNL 120

Query: 121 FISLIWYIYT 131
           F+++ W IY+
Sbjct: 121 FLTIFWMIYS 130

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BLAST of MS007919 vs. ExPASy Swiss-Prot
Match: Q8GWT5 (Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.4e-28
Identity = 65/134 (48.51%), Postives = 89/134 (66.42%), Query Frame = 0


Query: 1   MGDLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFC 60
           MG+++ W+ +  ILI LL ++ YQ I L DLE DYIN +DS SRIN VVL E + Q   C
Sbjct: 1   MGEVWTWIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLC 60

Query: 61  FVHLLARHWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQRFVKMVYFIILS 120
             +L+  HWFM L+ +P L +N  LY RK+HL DVTEI+N + WEKK+R  K+ Y I+  
Sbjct: 61  VFYLVTGHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTL 120

Query: 121 FISLIWYIYTDTCD 135
           F+++ W IY+   D
Sbjct: 121 FLTIFWLIYSTLDD 134

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BLAST of MS007919 vs. ExPASy Swiss-Prot
Match: Q9SZ74 (Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV=2)

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-26
Identity = 63/130 (48.46%), Postives = 89/130 (68.46%), Query Frame = 0


Query: 1   MGDLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFC 60
           MGDL  W+ +   L  L++I+ YQ  CL DLE D IN +D +SRINR+VL EF  Q + C
Sbjct: 1   MGDLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLC 60

Query: 61  FVHLLARHWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQRFVKMVYFIILS 120
             ++L  HWFM ++SLP L +NIRLY+++EHLADVTE+YN   WE+K+R  K+ +  +  
Sbjct: 61  LYYILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIALSI 120

Query: 121 FISLIWYIYT 131
           FI+  W I++
Sbjct: 121 FITTYWLIHS 130

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BLAST of MS007919 vs. ExPASy Swiss-Prot
Match: Q3EDD7 (Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12340 PE=2 SV=2)

HSP 1 Score: 119.8 bits (299), Expect = 2.4e-26
Identity = 55/105 (52.38%), Postives = 74/105 (70.48%), Query Frame = 0


Query: 26  ICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFCFVHLLARHWFMFLVSLPCLCFNIRL 85
           +CL DLE DYIN +DS SRIN VVL EF+ Q V C  +LL  HWFM L+ LP L +N  L
Sbjct: 18  VCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFHL 77

Query: 86  YVRKEHLADVTEIYNQIGWEKKQRFVKMVYFIILSFISLIWYIYT 131
           Y +++HL DVTEI+N + WEKK+R  K+ Y ++  F+++ W IY+
Sbjct: 78  YSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYS 122

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BLAST of MS007919 vs. ExPASy Swiss-Prot
Match: Q9C7D7 (Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 4.0e-21
Identity = 51/124 (41.13%), Postives = 84/124 (67.74%), Query Frame = 0


Query: 3   DLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFCFV 62
           DLF W+ + F+ + L+  + YQ ICL DLE+DY+N F++++RINR+V+ EF+ Q   C +
Sbjct: 4   DLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLL 63

Query: 63  HLLARHWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQRFVKMVYFIILSFI 122
            LL  HW  FLV++P   ++  LY  + +L DVTE++  I +EKK R+ K+ +++ L FI
Sbjct: 64  FLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFL-FI 123

Query: 123 SLIW 127
            +++
Sbjct: 124 MVVF 126

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BLAST of MS007919 vs. ExPASy TrEMBL
Match: A0A6J1DF23 (protein cornichon homolog 4-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111020444 PE=3 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.7e-62
Identity = 127/128 (99.22%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 1   MGDLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFC 60
           MGDLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFC
Sbjct: 1   MGDLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFC 60

Query: 61  FVHLLARHWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQRFVKMVYFIILS 120
           FVHLLARHWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQRFVKMVYFIILS
Sbjct: 61  FVHLLARHWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQRFVKMVYFIILS 120

Query: 121 FISLIWYI 129
           FISLIW I
Sbjct: 121 FISLIWMI 128

[Close]

BLAST of MS007919 vs. ExPASy TrEMBL
Match: A0A6J1DFZ1 (protein cornichon homolog 4-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111020444 PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.4e-53
Identity = 110/114 (96.49%), Postives = 111/114 (97.37%), Query Frame = 0


Query: 1   MGDLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFC 60
           MGDLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFC
Sbjct: 1   MGDLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFC 60

Query: 61  FVHLLARHWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQRFVKMV 115
           FVHLLARHWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQR +  V
Sbjct: 61  FVHLLARHWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQRMISSV 114

[Close]

BLAST of MS007919 vs. ExPASy TrEMBL
Match: A0A1S3CBU0 (protein cornichon homolog 4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499030 PE=3 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 7.1e-53
Identity = 107/128 (83.59%), Postives = 119/128 (92.97%), Query Frame = 0


Query: 1   MGDLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFC 60
           MGDLFAWLFNL +LIFL++ILGYQ ICLVDLESDYINLFDSTSRINRVV+LEF+ Q VF 
Sbjct: 1   MGDLFAWLFNLLLLIFLIVILGYQIICLVDLESDYINLFDSTSRINRVVMLEFITQGVFS 60

Query: 61  FVHLLARHWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQRFVKMVYFIILS 120
           FVHLLARHWFMFLVSLPCL FN+RLY+RKEHLADVTEIYN IG EKKQRF+K++YF++L 
Sbjct: 61  FVHLLARHWFMFLVSLPCLYFNVRLYIRKEHLADVTEIYNHIGCEKKQRFLKIIYFLVLL 120

Query: 121 FISLIWYI 129
           FISLIWYI
Sbjct: 121 FISLIWYI 128

[Close]

BLAST of MS007919 vs. ExPASy TrEMBL
Match: A0A1S3CD35 (protein cornichon homolog 4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499030 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 7.8e-52
Identity = 106/128 (82.81%), Postives = 118/128 (92.19%), Query Frame = 0


Query: 1   MGDLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFC 60
           MGDLFAWLFNL +LIFL++ILGYQ ICLVDLESDYINLFDSTSRINRVV+LEF+ Q VF 
Sbjct: 1   MGDLFAWLFNLLLLIFLIVILGYQIICLVDLESDYINLFDSTSRINRVVMLEFITQGVFS 60

Query: 61  FVHLLARHWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQRFVKMVYFIILS 120
           FVHLLARHWFMFLVSLPCL FN+RLY+RKEHLADVTEIYN IG EKKQRF+K++YF++L 
Sbjct: 61  FVHLLARHWFMFLVSLPCLYFNVRLYIRKEHLADVTEIYNHIGCEKKQRFLKIIYFLVLL 120

Query: 121 FISLIWYI 129
           FISLIW I
Sbjct: 121 FISLIWTI 128

[Close]

BLAST of MS007919 vs. ExPASy TrEMBL
Match: A0A6P9EIV6 (protein cornichon homolog 4-like OS=Juglans regia OX=51240 GN=LOC108987615 PE=3 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 4.3e-34
Identity = 78/128 (60.94%), Postives = 96/128 (75.00%), Query Frame = 0


Query: 1   MGDLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFC 60
           MG L+ WL + F L+ LL  LG+Q +CLVDLE DYIN +DS SRIN VVL EF+ Q V C
Sbjct: 29  MGTLWLWLLSFFFLVGLLCTLGFQLMCLVDLEFDYINPYDSASRINGVVLPEFIVQGVLC 88

Query: 61  FVHLLARHWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQRFVKMVYFIILS 120
           F  LL R+W MF+ SLP LC+N+RLY++++HL DVTEIYNQ+ WEKK RF K+ Y IIL 
Sbjct: 89  FFFLLTRNWLMFVFSLPYLCYNVRLYMQRQHLVDVTEIYNQLRWEKKLRFFKIGYLIILF 148

Query: 121 FISLIWYI 129
           F+SL W I
Sbjct: 149 FLSLYWLI 156

[Close]

BLAST of MS007919 vs. TAIR 10
Match: AT1G12390.1 (Cornichon family protein )

HSP 1 Score: 137.5 bits (345), Expect = 8.0e-33
Identity = 67/130 (51.54%), Postives = 91/130 (70.00%), Query Frame = 0


Query: 1   MGDLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFC 60
           MGD++ WL + F LI L+ I+ YQ +CL DLE DYIN +DS SRIN VVL EF+ Q V C
Sbjct: 1   MGDIWTWLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLC 60

Query: 61  FVHLLARHWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQRFVKMVYFIILS 120
             +LL  HWFM L+ LP L +N  LY +++HL DVTEI+N + WEKK+R  K+ Y ++  
Sbjct: 61  VFYLLTGHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNL 120

Query: 121 FISLIWYIYT 131
           F+++ W IY+
Sbjct: 121 FLTIFWMIYS 130

[Close]

BLAST of MS007919 vs. TAIR 10
Match: AT1G62880.1 (Cornichon family protein )

HSP 1 Score: 125.9 bits (315), Expect = 2.4e-29
Identity = 65/134 (48.51%), Postives = 89/134 (66.42%), Query Frame = 0


Query: 1   MGDLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFC 60
           MG+++ W+ +  ILI LL ++ YQ I L DLE DYIN +DS SRIN VVL E + Q   C
Sbjct: 1   MGEVWTWIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLC 60

Query: 61  FVHLLARHWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQRFVKMVYFIILS 120
             +L+  HWFM L+ +P L +N  LY RK+HL DVTEI+N + WEKK+R  K+ Y I+  
Sbjct: 61  VFYLVTGHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTL 120

Query: 121 FISLIWYIYTDTCD 135
           F+++ W IY+   D
Sbjct: 121 FLTIFWLIYSTLDD 134

[Close]

BLAST of MS007919 vs. TAIR 10
Match: AT4G12090.1 (Cornichon family protein )

HSP 1 Score: 120.9 bits (302), Expect = 7.8e-28
Identity = 63/130 (48.46%), Postives = 89/130 (68.46%), Query Frame = 0


Query: 1   MGDLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFC 60
           MGDL  W+ +   L  L++I+ YQ  CL DLE D IN +D +SRINR+VL EF  Q + C
Sbjct: 1   MGDLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLC 60

Query: 61  FVHLLARHWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQRFVKMVYFIILS 120
             ++L  HWFM ++SLP L +NIRLY+++EHLADVTE+YN   WE+K+R  K+ +  +  
Sbjct: 61  LYYILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIALSI 120

Query: 121 FISLIWYIYT 131
           FI+  W I++
Sbjct: 121 FITTYWLIHS 130

[Close]

BLAST of MS007919 vs. TAIR 10
Match: AT1G12340.1 (Cornichon family protein )

HSP 1 Score: 119.8 bits (299), Expect = 1.7e-27
Identity = 55/105 (52.38%), Postives = 74/105 (70.48%), Query Frame = 0


Query: 26  ICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFCFVHLLARHWFMFLVSLPCLCFNIRL 85
           +CL DLE DYIN +DS SRIN VVL EF+ Q V C  +LL  HWFM L+ LP L +N  L
Sbjct: 18  VCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFHL 77

Query: 86  YVRKEHLADVTEIYNQIGWEKKQRFVKMVYFIILSFISLIWYIYT 131
           Y +++HL DVTEI+N + WEKK+R  K+ Y ++  F+++ W IY+
Sbjct: 78  YSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYS 122

[Close]

BLAST of MS007919 vs. TAIR 10
Match: AT3G12180.1 (Cornichon family protein )

HSP 1 Score: 102.4 bits (254), Expect = 2.9e-22
Identity = 51/124 (41.13%), Postives = 84/124 (67.74%), Query Frame = 0


Query: 3   DLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFCFV 62
           DLF W+ + F+ + L+  + YQ ICL DLE+DY+N F++++RINR+V+ EF+ Q   C +
Sbjct: 4   DLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLL 63

Query: 63  HLLARHWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQRFVKMVYFIILSFI 122
            LL  HW  FLV++P   ++  LY  + +L DVTE++  I +EKK R+ K+ +++ L FI
Sbjct: 64  FLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFL-FI 123

Query: 123 SLIW 127
            +++
Sbjct: 124 MVVF 126

The following BLAST results are available for this feature:

BLAST of MS007919 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152825.1	3.5e-62	99.22	protein cornichon homolog 4-like isoform X1 [Momordica charantia] >XP_022152831....	[more]
XP_022152838.1	2.9e-53	96.49	protein cornichon homolog 4-like isoform X2 [Momordica charantia] >XP_022152841....	[more]
XP_008460127.1	1.5e-52	83.59	PREDICTED: protein cornichon homolog 4-like isoform X1 [Cucumis melo]	[more]
XP_008460129.1	1.6e-51	82.81	PREDICTED: protein cornichon homolog 4-like isoform X2 [Cucumis melo]	[more]
XP_023916255.1	5.2e-34	59.23	protein cornichon homolog 4-like [Quercus suber] >XP_023916256.1 protein cornich...	[more]

BLAST of MS007919 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84W04	1.1e-31	51.54	Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV...	[more]
Q8GWT5	3.4e-28	48.51	Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV...	[more]
Q9SZ74	1.1e-26	48.46	Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV...	[more]
Q3EDD7	2.4e-26	52.38	Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g1234...	[more]
Q9C7D7	4.0e-21	41.13	Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV...	[more]

BLAST of MS007919 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DF23	1.7e-62	99.22	protein cornichon homolog 4-like isoform X1 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1DFZ1	1.4e-53	96.49	protein cornichon homolog 4-like isoform X2 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A1S3CBU0	7.1e-53	83.59	protein cornichon homolog 4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499...	[more]
A0A1S3CD35	7.8e-52	82.81	protein cornichon homolog 4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499...	[more]
A0A6P9EIV6	4.3e-34	60.94	protein cornichon homolog 4-like OS=Juglans regia OX=51240 GN=LOC108987615 PE=3 ...	[more]

BLAST of MS007919 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12390.1	8.0e-33	51.54	Cornichon family protein	[more]
AT1G62880.1	2.4e-29	48.51	Cornichon family protein	[more]
AT4G12090.1	7.8e-28	48.46	Cornichon family protein	[more]
AT1G12340.1	1.7e-27	52.38	Cornichon family protein	[more]
AT3G12180.1	2.9e-22	41.13	Cornichon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003377	Cornichon	SMART	SM01398	Cornichon_2	coord: 4..125 e-value: 3.1E-46 score: 169.6
IPR003377	Cornichon	PFAM	PF03311	Cornichon	coord: 5..124 e-value: 9.1E-35 score: 119.6
None	No IPR available	PANTHER	PTHR12290:SF22	CORNICHON FAMILY PROTEIN	coord: 1..130
None	No IPR available	PANTHER	PTHR12290	CORNICHON-RELATED	coord: 1..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS007919.1	MS007919.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport