MS007865 (gene) Bitter gourd (TR) v1

Overview


Name	MS007865
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	10 kDa chaperonin 1, chloroplastic-like
Location	scaffold13: 1913131 .. 1916300 (+)
RNA-Seq Expression	MS007865
Synteny	MS007865

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCTACTTTCTTCACTCTGAAGCCTTTCATAAGCAAAATCGATGCACCCACTTCGTGGAATCAGAGATTACAGAGTAATTGCTCATCTTCTTCCCTCAGCTCTCCTCCAATCTCAGTTTCTTCTTTCTTTCGTCGTTGATTTTTTGTTCTGGGCAGGCACTCGGAGAACTTCCCTTAGAGTCTGTGCAGTGGCGAAGAAATTGGAACCCGCCAAGGTCTGAAACCCTATTACCCTTTATTGGGTTTTCGGTTAAGTTTTGAGTTGAAATCTTGCCGATTCTGGTTTCGTTCTAAGATTCATTGTCTGTTTTGAGTTGAGGGGGGCAGAGATTATGATTTATGAGTTGTGGGTTTGTACTTGTGGATTGCAGGTTGTTCCTCAAGGTGATAGAGTCCTCATTCGGCTGGAGGAGCTTCCTGATGTATGAATTTTTAACATCCATGGCTGTCGTTTTCTTCAATCATTTTACTTTTGTGTTCTTAAGTGATATATTGTTAAAATTCTTAACAGGCTGAGTAGAAATTGAATTTTTAAGTTGCCTTTTGGAAACTATTTTGTTTTTGAAAATTAAGATTATGAACATTATTTCTCTATGTGCGTTTCTTCTTGTCTTGTAGTTTTAAAAACTTGGTTTTGTTTTTGAAATTTGGCTAAGAATTCTGATGTATTTTTAAGAAAGAGAACAACATACCGTAGATATTGTGGGGAAGTCAGTGTAATTTTTAAAAACTGAAACTAAAAATGAAATTCTTGTCAAACTGGAGCTGATCTTCCACCATATGTTTTGTATCATGACTTAAACAACCAGTACTAGAGTCGCTTTTCGGCCATATGAAAAAAGTAAAGAAACTCTGGGGAAATGGGTTTGGTGGCCACCTTCTCTAAGAGGTTGAAATCCTACAAGTTTATTCATGACCAAATGTTTTAGGGTTAATGGTTATTCCACGAGATTATTTAAGGTGCACGTAAGTTGGTCCAGGCATTCACGAGCATTAAGAAAAAAAAAACTTAACTTATTTTACCTTCAAATAACCGAACTTTGATTTGTAAGTCTGTTTGACATGAATTTACACAGTTATTTGTATCACAACTTGAACTTTGACATTTTATTCTCTTCATTGGAATTTCATATTGCTAAGGAATTGAAAATCTAGATAGTTCTACCTTTCAATCTCGTATTGTATTGTATTCTATTACAATCTTCAATGATTGAGTAAATTGATCATGAGCAGCAGTTAGGAAGTTAACTTTTATAATAAGAATGTTTCTTCTCAAACTTCAACATCTGAGTCCATTGAAGGGTTTATTCTACTCAATAACCAGGTATCGAGTTTTTTGGCACTATGATAAATGAATTTCTAGGTCACAGGCACTTTTTTATCCACTGCAACAAGGATGTTCTAATATATGGTTGCATTTTGAGCTTGCATTGATGTCTAAGTTAGTTGCACCAAATTGAGTCTATGAGAAAGAGAAACGGTGATTATTACAGTTAAGGCACCGCTTCTTGGGGATAGAAATTTGGAAATTAGATCAATTGGAGATGCTAAATATGTTTGGGAGACTTTAGAACTTCGTAGATTGATTTTAATTGCTAGTATAAGTTTATGTAGCATGCTTTCAAGTAATAAAAATTTAGTGACCACTGAAGAAAATAGTATGTATGAATGACAATGCTAATCACTTGAATTTTAGGTACTGAAATTATACTAATTTATCAGCATTCCACATTGTCGTGCAGTCTGGAACTGACTCTTCAATCAAATTTTTTGTCACAGAAATCAGCAGGCGGAGTTTTGTTACCCAAGTCAGCTGTTAAATTCGAGCGTTATCTTTTGGGAGAAGTAAGTGAAATTCCTTCCTTCTCCAAATCTGCTAAGATGGAAAGCAAAACAAAACTGCGGCAGTCCCTTTGTGTTTCTTTACTCTGCTGCTAGTGCTGACTTTTCATCGTTTTTCAGATCCTCTCTACAGGTGGCGATGCTGATGCTGGGGAATTGGAGAAGGGAAAGAAGGTTAGGATTCAACTTCCTGTTTAGCTTCTTGTTTTTCTACTGTTGGTGTTGAAAACTACAACATTTCTCCAAGGATTCTTAATTTTTCTTTAAAAAATGTTTGCCTGTACCTTTTTATTAAGAGGAGAATAATTTTATTGTGTTGCAGGTTCTTTTCTCAGACATGAGTGCGTATGAGGTAAGCCACATTAACTTGAAGATTACTTGTTCATTTCAGCAGTTATTCTTCAGAATTTTCACAGTATTTTATGATTTTCCATCTGAACAAGTAGTTATCATAGCATGTTCAGCTTAATGAAATACATAGACAAAATTGAAACTTAATTATAGAAACAAGAAATTGACACAAACATCAGTAGGTAAAAAAAAAAAATAAAAAAAAAATAATAAAGCTTGTGGGATTCAAAATAAATGAAGCCCACTTATACTAGGTTCGATTGGTCCAACCTGACCCCGACCAGACCAGCCACTAAAACTGTTAGGATCCCAAATACACTAAACACAAGATAACCATATTGCAATATCAAAGAGAAATTACCATATCAATAACTTTTCGAGAGTACTGTCTCTCCCTCAAGAACTCTCCAAAGTTCCTCACCAGAAAATACTTCTCAAGATGCCCTACTATCCCTATTTATAACAAACTGACCCCTGACTAATTATCATAATATCCTTAACTACAATACTAATACTATCCCCATATTCCCAAACTAACCCTAATAGGACTCACAAAAACACAGATGAAAACAACCAGACTACACATTAGGGTTAACCACAAGAGAAGACCTCAAGCGATTTTGGTGCAATTGGGGGTTAGATCCAAGGTTCTCCATAGATCCAATGCTCAAACTCGAACGCCCTACCTCAGAAGAAGTTATTTGACATGGCCAGAACAATGCAGTTGACAGTTTTATATCGTTTGATATATGATAGAGACTGAAAAAGAAAAGGTAGTTTGACCATGCATTCGACAGTTACGAGGGTGGTGACTATATTGAATAATTCCTCGGACATCATTTAAGTTCGGCAGCATTTTGTTCTGTCCATTGATGTTGAATATGGATGGTTTTCTTTATTTCACAGGTGGATTTAGGTACAGATGCAAAGCATGTCTTCTGCAAAGCAAGTGATTTGCTGGCTGTAGTTGAG

mRNA sequence

ATGGCGTCTACTTTCTTCACTCTGAAGCCTTTCATAAGCAAAATCGATGCACCCACTTCGTGGAATCAGAGATTACAGAGCACTCGGAGAACTTCCCTTAGAGTCTGTGCAGTGGCGAAGAAATTGGAACCCGCCAAGGTTGTTCCTCAAGGTGATAGAGTCCTCATTCGGCTGGAGGAGCTTCCTGATAAATCAGCAGGCGGAGTTTTGTTACCCAAGTCAGCTGTTAAATTCGAGCGTTATCTTTTGGGAGAAGTAAGTGAAATTCCTTCCTTCTCCAAATCTGCTAAGATGGAAAGCAAAACAAAACTGCGGCAGTCCCTTTGTGTGGATTTAGGTACAGATGCAAAGCATGTCTTCTGCAAAGCAAGTGATTTGCTGGCTGTAGTTGAG

Coding sequence (CDS)

ATGGCGTCTACTTTCTTCACTCTGAAGCCTTTCATAAGCAAAATCGATGCACCCACTTCGTGGAATCAGAGATTACAGAGCACTCGGAGAACTTCCCTTAGAGTCTGTGCAGTGGCGAAGAAATTGGAACCCGCCAAGGTTGTTCCTCAAGGTGATAGAGTCCTCATTCGGCTGGAGGAGCTTCCTGATAAATCAGCAGGCGGAGTTTTGTTACCCAAGTCAGCTGTTAAATTCGAGCGTTATCTTTTGGGAGAAGTAAGTGAAATTCCTTCCTTCTCCAAATCTGCTAAGATGGAAAGCAAAACAAAACTGCGGCAGTCCCTTTGTGTGGATTTAGGTACAGATGCAAAGCATGTCTTCTGCAAAGCAAGTGATTTGCTGGCTGTAGTTGAG

Protein sequence

MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMESKTKLRQSLCVDLGTDAKHVFCKASDLLAVVE

Homology

[Close]

BLAST of MS007865 vs. NCBI nr
Match: XP_022155782.1 (10 kDa chaperonin 1, chloroplastic-like [Momordica charantia])

HSP 1 Score: 205.7 bits (522), Expect = 2.5e-49
Identity = 109/135 (80.74%), Postives = 117/135 (86.67%), Query Frame = 0


Query: 1   MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEE 60
           MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEE
Sbjct: 1   MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEE 60

Query: 61  LPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMESKTKL----RQSLCVDLGTDA 120
           LPDKSAGGVLLPKSAVKFERYLLGE+    + + + ++E   K+      +  VDLGTDA
Sbjct: 61  LPDKSAGGVLLPKSAVKFERYLLGEILSTGADADAGELEKGKKVLFSDMSAYEVDLGTDA 120

Query: 121 KHVFCKASDLLAVVE 132
           KHVFCKASDLLAVVE
Sbjct: 121 KHVFCKASDLLAVVE 135

[Close]

BLAST of MS007865 vs. NCBI nr
Match: XP_038906447.1 (10 kDa chaperonin 1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 179.1 bits (453), Expect = 2.5e-41
Identity = 97/133 (72.93%), Postives = 106/133 (79.70%), Query Frame = 0


Query: 1   MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEE 60
           MAS F T+KPF++KIDAPT  NQRL STRRTSL+VCAVAKKLEP KVVPQGDRVLIRLEE
Sbjct: 1   MASMFLTVKPFVNKIDAPTFSNQRLHSTRRTSLKVCAVAKKLEPTKVVPQGDRVLIRLEE 60

Query: 61  LPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMESKTKLR--QSLCVDLGTDAKH 120
           LP+KSAGGVLLPKSAVKFERYLLGE+    + +       K       +  VDLGTDAKH
Sbjct: 61  LPEKSAGGVLLPKSAVKFERYLLGEILSAGADAGELGKGKKVLFSDISAYEVDLGTDAKH 120

Query: 121 VFCKASDLLAVVE 132
           VFCKASDLLAVVE
Sbjct: 121 VFCKASDLLAVVE 133

[Close]

BLAST of MS007865 vs. NCBI nr
Match: XP_023006781.1 (10 kDa chaperonin 1, chloroplastic-like [Cucurbita maxima] >XP_023006782.1 10 kDa chaperonin 1, chloroplastic-like [Cucurbita maxima] >XP_023549322.1 10 kDa chaperonin 1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 177.9 bits (450), Expect = 5.5e-41
Identity = 95/133 (71.43%), Postives = 107/133 (80.45%), Query Frame = 0


Query: 1   MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEE 60
           MAS F T+KPF++KID PT  N+R+QSTRRTSL+VCAV+KKLEPAKVVPQGDRVLIRLEE
Sbjct: 1   MASMFLTVKPFVNKIDVPTLSNRRIQSTRRTSLKVCAVSKKLEPAKVVPQGDRVLIRLEE 60

Query: 61  LPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMESKTKLR--QSLCVDLGTDAKH 120
           LP+KSAGGVLLPKSAVKFERYLLGE+    + +       K       +  VDLGTDAKH
Sbjct: 61  LPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGKKVLFSDISAYEVDLGTDAKH 120

Query: 121 VFCKASDLLAVVE 132
           VFCKASDLLAVVE
Sbjct: 121 VFCKASDLLAVVE 133

[Close]

BLAST of MS007865 vs. NCBI nr
Match: XP_022958987.1 (10 kDa chaperonin 1, chloroplastic-like [Cucurbita moschata] >XP_022958988.1 10 kDa chaperonin 1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 174.9 bits (442), Expect = 4.7e-40
Identity = 94/133 (70.68%), Postives = 106/133 (79.70%), Query Frame = 0


Query: 1   MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEE 60
           MAS F T+KPF++KID  T  N+R+QSTRRTSL+VCAV+KKLEPAKVVPQGDRVLIRLEE
Sbjct: 1   MASMFLTVKPFVNKIDVSTLSNRRIQSTRRTSLKVCAVSKKLEPAKVVPQGDRVLIRLEE 60

Query: 61  LPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMESKTKLR--QSLCVDLGTDAKH 120
           LP+KSAGGVLLPKSAVKFERYLLGE+    + +       K       +  VDLGTDAKH
Sbjct: 61  LPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGKKVLFSDISAYEVDLGTDAKH 120

Query: 121 VFCKASDLLAVVE 132
           VFCKASDLLAVVE
Sbjct: 121 VFCKASDLLAVVE 133

[Close]

BLAST of MS007865 vs. NCBI nr
Match: KAG6574824.1 (10 kDa chaperonin 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013401.1 10 kDa chaperonin 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 173.7 bits (439), Expect = 1.0e-39
Identity = 93/133 (69.92%), Postives = 106/133 (79.70%), Query Frame = 0


Query: 1   MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEE 60
           MAS F T+KP+++KID PT  N+R+QSTRRTSL+VCAV+KKLE AKVVPQGDRVLIRLEE
Sbjct: 1   MASMFLTVKPYVNKIDVPTLSNRRIQSTRRTSLKVCAVSKKLESAKVVPQGDRVLIRLEE 60

Query: 61  LPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMESKTKLR--QSLCVDLGTDAKH 120
           LP+KSAGGVLLPKSAVKFERYLLGE+    + +       K       +  VDLGTDAKH
Sbjct: 61  LPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGKKVLFSDISAYEVDLGTDAKH 120

Query: 121 VFCKASDLLAVVE 132
           VFCKASDLLAVVE
Sbjct: 121 VFCKASDLLAVVE 133

[Close]

BLAST of MS007865 vs. ExPASy Swiss-Prot
Match: Q9M1C2 (10 kDa chaperonin 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CPN10-1 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 3.8e-29
Identity = 79/138 (57.25%), Postives = 92/138 (66.67%), Query Frame = 0


Query: 1   MASTFFTL-KPFIS---KIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLI 60
           MAS+F T+ KPF+S   K +APT   Q L   RR S R+ AV+ K EPAKVVPQ DRVL+
Sbjct: 1   MASSFITVPKPFLSFPIKTNAPTLPQQTLLGIRRNSFRINAVSTKWEPAKVVPQADRVLV 60

Query: 61  RLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMESKTKLRQSLC--VDLGT 120
           RLE LP+KS+GGVLLPKSAVKFERYL GEV  + S     +   K          VD GT
Sbjct: 61  RLEVLPEKSSGGVLLPKSAVKFERYLTGEVVSVGSEVGEVEPGKKVLFSDMSAYEVDFGT 120

Query: 121 -DAKHVFCKASDLLAVVE 132
            DAKH FCK SDLLA+V+
Sbjct: 121 EDAKHCFCKESDLLAIVQ 138

[Close]

BLAST of MS007865 vs. ExPASy Swiss-Prot
Match: O80504 (10 kDa chaperonin 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CPN10-2 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.6e-27
Identity = 73/139 (52.52%), Postives = 88/139 (63.31%), Query Frame = 0


Query: 1   MASTFFTLKP-----FISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVL 60
           MASTF    P     F  K   P++ N  L  +RR  LR+ A++ K EP KVVPQ DRVL
Sbjct: 1   MASTFVCSLPNPFFAFPVKATTPSTANHTLLGSRRGCLRIKAISTKWEPTKVVPQADRVL 60

Query: 61  IRLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMESKTKLRQSLC---VDL 120
           +RLE+LP KS+GGVLLPK+AVKFERYL GE+  + S         K  L   +    VDL
Sbjct: 61  VRLEDLPIKSSGGVLLPKAAVKFERYLTGEIISVGSEVGQQVGPGKRVLFSDVSAYEVDL 120

Query: 121 GTDAKHVFCKASDLLAVVE 132
           GTDA+H FCK SDLLA+VE
Sbjct: 121 GTDARHCFCKESDLLALVE 139

[Close]

BLAST of MS007865 vs. ExPASy TrEMBL
Match: A0A6J1DQA5 (10 kDa chaperonin 1, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111022821 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.2e-49
Identity = 109/135 (80.74%), Postives = 117/135 (86.67%), Query Frame = 0


Query: 1   MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEE 60
           MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEE
Sbjct: 1   MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEE 60

Query: 61  LPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMESKTKL----RQSLCVDLGTDA 120
           LPDKSAGGVLLPKSAVKFERYLLGE+    + + + ++E   K+      +  VDLGTDA
Sbjct: 61  LPDKSAGGVLLPKSAVKFERYLLGEILSTGADADAGELEKGKKVLFSDMSAYEVDLGTDA 120

Query: 121 KHVFCKASDLLAVVE 132
           KHVFCKASDLLAVVE
Sbjct: 121 KHVFCKASDLLAVVE 135

[Close]

BLAST of MS007865 vs. ExPASy TrEMBL
Match: A0A6J1KWR7 (10 kDa chaperonin 1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111499414 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.7e-41
Identity = 95/133 (71.43%), Postives = 107/133 (80.45%), Query Frame = 0


Query: 1   MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEE 60
           MAS F T+KPF++KID PT  N+R+QSTRRTSL+VCAV+KKLEPAKVVPQGDRVLIRLEE
Sbjct: 1   MASMFLTVKPFVNKIDVPTLSNRRIQSTRRTSLKVCAVSKKLEPAKVVPQGDRVLIRLEE 60

Query: 61  LPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMESKTKLR--QSLCVDLGTDAKH 120
           LP+KSAGGVLLPKSAVKFERYLLGE+    + +       K       +  VDLGTDAKH
Sbjct: 61  LPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGKKVLFSDISAYEVDLGTDAKH 120

Query: 121 VFCKASDLLAVVE 132
           VFCKASDLLAVVE
Sbjct: 121 VFCKASDLLAVVE 133

[Close]

BLAST of MS007865 vs. ExPASy TrEMBL
Match: A0A6J1H3B8 (10 kDa chaperonin 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111460114 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 2.3e-40
Identity = 94/133 (70.68%), Postives = 106/133 (79.70%), Query Frame = 0


Query: 1   MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEE 60
           MAS F T+KPF++KID  T  N+R+QSTRRTSL+VCAV+KKLEPAKVVPQGDRVLIRLEE
Sbjct: 1   MASMFLTVKPFVNKIDVSTLSNRRIQSTRRTSLKVCAVSKKLEPAKVVPQGDRVLIRLEE 60

Query: 61  LPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMESKTKLR--QSLCVDLGTDAKH 120
           LP+KSAGGVLLPKSAVKFERYLLGE+    + +       K       +  VDLGTDAKH
Sbjct: 61  LPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGKKVLFSDISAYEVDLGTDAKH 120

Query: 121 VFCKASDLLAVVE 132
           VFCKASDLLAVVE
Sbjct: 121 VFCKASDLLAVVE 133

[Close]

BLAST of MS007865 vs. ExPASy TrEMBL
Match: A0A5D3DLT2 (Chloroplast chaperonin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00930 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.1e-39
Identity = 93/133 (69.92%), Postives = 103/133 (77.44%), Query Frame = 0


Query: 1   MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEE 60
           MAS F T+KPF++K + PT  NQRL STRR SL+VCAV KKLEPAKVVPQGDRVLIRLEE
Sbjct: 1   MASMFLTVKPFVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEE 60

Query: 61  LPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMESKTKLR--QSLCVDLGTDAKH 120
           LP+KSAGGVLLPKSAVKFERYLLGE+    + +       K       +  VDLGTDAKH
Sbjct: 61  LPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDLGQGKKVLFSDISAYEVDLGTDAKH 120

Query: 121 VFCKASDLLAVVE 132
           VFCKASDLLAVVE
Sbjct: 121 VFCKASDLLAVVE 133

[Close]

BLAST of MS007865 vs. ExPASy TrEMBL
Match: A0A0A0KET7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G080390 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.1e-39
Identity = 93/133 (69.92%), Postives = 103/133 (77.44%), Query Frame = 0


Query: 1   MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEE 60
           MAS F T+KPF++K + PT  NQRL STRR SL+VCAV KKLEPAKVVPQGDRVLIRLEE
Sbjct: 1   MASMFLTVKPFVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEE 60

Query: 61  LPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMESKTKLR--QSLCVDLGTDAKH 120
           LP+KSAGGVLLPKSAVKFERYLLGE+    + +       K       +  VDLGTDAKH
Sbjct: 61  LPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDLGQGKKVLFSDISAYEVDLGTDAKH 120

Query: 121 VFCKASDLLAVVE 132
           VFCKASDLLAVVE
Sbjct: 121 VFCKASDLLAVVE 133

[Close]

BLAST of MS007865 vs. TAIR 10
Match: AT3G60210.1 (GroES-like family protein )

HSP 1 Score: 129.0 bits (323), Expect = 2.7e-30
Identity = 79/138 (57.25%), Postives = 92/138 (66.67%), Query Frame = 0


Query: 1   MASTFFTL-KPFIS---KIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLI 60
           MAS+F T+ KPF+S   K +APT   Q L   RR S R+ AV+ K EPAKVVPQ DRVL+
Sbjct: 1   MASSFITVPKPFLSFPIKTNAPTLPQQTLLGIRRNSFRINAVSTKWEPAKVVPQADRVLV 60

Query: 61  RLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMESKTKLRQSLC--VDLGT 120
           RLE LP+KS+GGVLLPKSAVKFERYL GEV  + S     +   K          VD GT
Sbjct: 61  RLEVLPEKSSGGVLLPKSAVKFERYLTGEVVSVGSEVGEVEPGKKVLFSDMSAYEVDFGT 120

Query: 121 -DAKHVFCKASDLLAVVE 132
            DAKH FCK SDLLA+V+
Sbjct: 121 EDAKHCFCKESDLLAIVQ 138

[Close]

BLAST of MS007865 vs. TAIR 10
Match: AT2G44650.1 (chloroplast chaperonin 10 )

HSP 1 Score: 122.5 bits (306), Expect = 2.6e-28
Identity = 73/139 (52.52%), Postives = 88/139 (63.31%), Query Frame = 0


Query: 1   MASTFFTLKP-----FISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVL 60
           MASTF    P     F  K   P++ N  L  +RR  LR+ A++ K EP KVVPQ DRVL
Sbjct: 1   MASTFVCSLPNPFFAFPVKATTPSTANHTLLGSRRGCLRIKAISTKWEPTKVVPQADRVL 60

Query: 61  IRLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMESKTKLRQSLC---VDL 120
           +RLE+LP KS+GGVLLPK+AVKFERYL GE+  + S         K  L   +    VDL
Sbjct: 61  VRLEDLPIKSSGGVLLPKAAVKFERYLTGEIISVGSEVGQQVGPGKRVLFSDVSAYEVDL 120

Query: 121 GTDAKHVFCKASDLLAVVE 132
           GTDA+H FCK SDLLA+VE
Sbjct: 121 GTDARHCFCKESDLLALVE 139

The following BLAST results are available for this feature:

BLAST of MS007865 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155782.1	2.5e-49	80.74	10 kDa chaperonin 1, chloroplastic-like [Momordica charantia]	[more]
XP_038906447.1	2.5e-41	72.93	10 kDa chaperonin 1, chloroplastic-like [Benincasa hispida]	[more]
XP_023006781.1	5.5e-41	71.43	10 kDa chaperonin 1, chloroplastic-like [Cucurbita maxima] >XP_023006782.1 10 kD...	[more]
XP_022958987.1	4.7e-40	70.68	10 kDa chaperonin 1, chloroplastic-like [Cucurbita moschata] >XP_022958988.1 10 ...	[more]
KAG6574824.1	1.0e-39	69.92	10 kDa chaperonin 1, chloroplastic, partial [Cucurbita argyrosperma subsp. soror...	[more]

BLAST of MS007865 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1C2	3.8e-29	57.25	10 kDa chaperonin 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CPN10-1 PE...	[more]
O80504	3.6e-27	52.52	10 kDa chaperonin 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CPN10-2 PE...	[more]

BLAST of MS007865 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DQA5	1.2e-49	80.74	10 kDa chaperonin 1, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1KWR7	2.7e-41	71.43	10 kDa chaperonin 1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111499...	[more]
A0A6J1H3B8	2.3e-40	70.68	10 kDa chaperonin 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A5D3DLT2	1.1e-39	69.92	Chloroplast chaperonin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A0A0KET7	1.1e-39	69.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G080390 PE=4 SV=1	[more]

BLAST of MS007865 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60210.1	2.7e-30	57.25	GroES-like family protein	[more]
AT2G44650.1	2.6e-28	52.52	chloroplast chaperonin 10	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020818	GroES chaperonin family	SMART	SM00883	Cpn10_2	coord: 46..130 e-value: 7.0E-4 score: 7.3
IPR020818	GroES chaperonin family	PFAM	PF00166	Cpn10	coord: 46..130 e-value: 6.0E-7 score: 29.4
IPR020818	GroES chaperonin family	PANTHER	PTHR10772	10 KDA HEAT SHOCK PROTEIN	coord: 23..130
IPR020818	GroES chaperonin family	CDD	cd00320	cpn10	coord: 46..130 e-value: 2.67442E-11 score: 54.0503
IPR037124	GroES chaperonin superfamily	GENE3D	2.30.33.40	GroES chaperonin	coord: 42..114 e-value: 2.4E-5 score: 26.1
None	No IPR available	PANTHER	PTHR10772:SF13	10 KDA CHAPERONIN 1, CHLOROPLASTIC-RELATED	coord: 23..130
IPR011032	GroES-like superfamily	SUPERFAMILY	50129	GroES-like	coord: 46..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS007865.1	MS007865.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity