MS007851 (gene) Bitter gourd (TR) v1

Overview


Name	MS007851
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Location	scaffold13: 1800086 .. 1800541 (-)
RNA-Seq Expression	MS007851
Synteny	MS007851

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAAAGAAAAGGAGATGCAAGAATTCTAATAATCTCCGGGGTGATCTTCCTCTGCATTATCTCCGGCGGTCTCCTCCTCGGCCTCTACCTTTATCTCCCGCAATCGGAATCCACCGATTGGTATCCGATCGTCGGGATCGTACTCGTCGCTACTCCTTGGATCTTCTGGCTTCTTGTTTATTTGTATCATTGCTTCAAACCCGCTGCTCAGCCTCAGCCTCAGCCTCCTCGATTCAATGCCTTCAATTCCTCTACCAATCGGGCGCCGCCCGCTGCCAATCCATCGGGGGCAGAATCTCCAAATTGTGATTCTCCCGGCGGCGGGAAGCGTCGGGTGCATTTCGGAACAACCAGGGAAGAGGGTATGGATTCAAATACCAATGGAGGAAACAATCATGAAAAGTGCCCTAGGGAAAGTGAATTGCCATTAAGTCCCTCCATCTCGTCTTCG

mRNA sequence

ATGGAAGAAAGAAAAGGAGATGCAAGAATTCTAATAATCTCCGGGGTGATCTTCCTCTGCATTATCTCCGGCGGTCTCCTCCTCGGCCTCTACCTTTATCTCCCGCAATCGGAATCCACCGATTGGTATCCGATCGTCGGGATCGTACTCGTCGCTACTCCTTGGATCTTCTGGCTTCTTGTTTATTTGTATCATTGCTTCAAACCCGCTGCTCAGCCTCAGCCTCAGCCTCCTCGATTCAATGCCTTCAATTCCTCTACCAATCGGGCGCCGCCCGCTGCCAATCCATCGGGGGCAGAATCTCCAAATTGTGATTCTCCCGGCGGCGGGAAGCGTCGGGTGCATTTCGGAACAACCAGGGAAGAGGGTATGGATTCAAATACCAATGGAGGAAACAATCATGAAAAGTGCCCTAGGGAAAGTGAATTGCCATTAAGTCCCTCCATCTCGTCTTCG

Coding sequence (CDS)

ATGGAAGAAAGAAAAGGAGATGCAAGAATTCTAATAATCTCCGGGGTGATCTTCCTCTGCATTATCTCCGGCGGTCTCCTCCTCGGCCTCTACCTTTATCTCCCGCAATCGGAATCCACCGATTGGTATCCGATCGTCGGGATCGTACTCGTCGCTACTCCTTGGATCTTCTGGCTTCTTGTTTATTTGTATCATTGCTTCAAACCCGCTGCTCAGCCTCAGCCTCAGCCTCCTCGATTCAATGCCTTCAATTCCTCTACCAATCGGGCGCCGCCCGCTGCCAATCCATCGGGGGCAGAATCTCCAAATTGTGATTCTCCCGGCGGCGGGAAGCGTCGGGTGCATTTCGGAACAACCAGGGAAGAGGGTATGGATTCAAATACCAATGGAGGAAACAATCATGAAAAGTGCCCTAGGGAAAGTGAATTGCCATTAAGTCCCTCCATCTCGTCTTCG

Protein sequence

MEERKGDARILIISGVIFLCIISGGLLLGLYLYLPQSESTDWYPIVGIVLVATPWIFWLLVYLYHCFKPAAQPQPQPPRFNAFNSSTNRAPPAANPSGAESPNCDSPGGGKRRVHFGTTREEGMDSNTNGGNNHEKCPRESELPLSPSISSS

Homology

[Close]

BLAST of MS007851 vs. NCBI nr
Match: XP_022155761.1 (uncharacterized protein LOC111022806 [Momordica charantia])

HSP 1 Score: 300.4 bits (768), Expect = 8.5e-78
Identity = 150/152 (98.68%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 1   MEERKGDARILIISGVIFLCIISGGLLLGLYLYLPQSESTDWYPIVGIVLVATPWIFWLL 60
           MEERKGDARILIISGVIFLCIISGGLLLGLYLYLPQSESTDWYPIVGIVLVATPWIFWLL
Sbjct: 5   MEERKGDARILIISGVIFLCIISGGLLLGLYLYLPQSESTDWYPIVGIVLVATPWIFWLL 64

Query: 61  VYLYHCFKPAAQPQPQPPRFNAFNSSTNRAPPAANPSGAESPNCDSPGGGKRRVHFGTTR 120
           VYLYHCFKPAA  QPQPPRFNAFNSSTNRAPPAANPSGAESPNCDSPGGGKRRVHFGTTR
Sbjct: 65  VYLYHCFKPAA--QPQPPRFNAFNSSTNRAPPAANPSGAESPNCDSPGGGKRRVHFGTTR 124

Query: 121 EEGMDSNTNGGNNHEKCPRESELPLSPSISSS 153
           EEGMDSNTNGGNNHEKCPRESELPLSPSISSS
Sbjct: 125 EEGMDSNTNGGNNHEKCPRESELPLSPSISSS 154

[Close]

BLAST of MS007851 vs. NCBI nr
Match: XP_023000624.1 (uncharacterized protein LOC111494867 [Cucurbita maxima])

HSP 1 Score: 152.9 bits (385), Expect = 2.2e-33
Identity = 85/163 (52.15%), Postives = 109/163 (66.87%), Query Frame = 0


Query: 1   MEERKGDARILIISGVIFLCIISGGLLLGLYLYLPQSESTDWYPIVGIVLVATPWIFWLL 60
           MEERKGDA ILIISG++FLC+++GGLLL LYL++P+SES DWY +VGI+LV+TPWIFW L
Sbjct: 1   MEERKGDATILIISGLMFLCVVAGGLLLCLYLFVPESESQDWYSVVGIILVSTPWIFWFL 60

Query: 61  VYLYHCFKPAAQPQPQPPRFNAFNSSTNRAPPAANPSG--------AESPNCDSPGGGKR 120
           VYLYHC KP    + Q       +SS+NR P AAN SG         ESP+CD+PG GKR
Sbjct: 61  VYLYHCLKPI---RLQSNAALKHSSSSNRPPSAANNSGGIVANLPQVESPDCDTPGDGKR 120

Query: 121 RVHFGTTREEGMDSNTNGGNNHEKCPRE----SELPLSPSISS 152
           RVHFG    +G +      ++H+   +E         SP++SS
Sbjct: 121 RVHFGAVVVKGNNPQGGKKSSHDSSSKELRSNESGATSPTLSS 160

[Close]

BLAST of MS007851 vs. NCBI nr
Match: KAG7026101.1 (hypothetical protein SDJN02_12600, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 151.4 bits (381), Expect = 6.4e-33
Identity = 79/148 (53.38%), Postives = 102/148 (68.92%), Query Frame = 0


Query: 1   MEERKGDARILIISGVIFLCIISGGLLLGLYLYLPQSESTDWYPIVGIVLVATPWIFWLL 60
           MEERKGDARILIISG++FLC+++GG LL LYL++P+SES DWY +VGI+LV+TPW+FW L
Sbjct: 1   MEERKGDARILIISGLMFLCVVAGGFLLCLYLFVPESESQDWYSVVGIILVSTPWMFWFL 60

Query: 61  VYLYHCFKPAAQPQPQPPRFNAFNSSTNRAPPAANPSG--------AESPNCDSPGGGKR 120
           VYLYHC KP    + Q     + +SS+NR P AAN  G         ESP+CD+PG GKR
Sbjct: 61  VYLYHCLKPI---RVQSNAALSHSSSSNRPPSAANKGGGIVANLPQVESPDCDTPGDGKR 120

Query: 121 RVHFGTTREEGMDSNTNGGNNHEKCPRE 141
           RVHFG    +G        ++H+   +E
Sbjct: 121 RVHFGAVVVKGNKPQGGKKSSHDSGSKE 145

[Close]

BLAST of MS007851 vs. NCBI nr
Match: XP_038875814.1 (uncharacterized protein LOC120068181 [Benincasa hispida])

HSP 1 Score: 141.7 bits (356), Expect = 5.1e-30
Identity = 86/170 (50.59%), Postives = 110/170 (64.71%), Query Frame = 0


Query: 1   MEERKGDARILIISGVIFLCIISGGLLLGLYLYLPQSESTDWYPIVGIVLVATPWIFWLL 60
           MEERKGDARI IISG+IFLCIISGG+LL LYL+LP+S++ DWYPIVGIVLV+TPWIFWL 
Sbjct: 1   MEERKGDARIFIISGLIFLCIISGGILLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLS 60

Query: 61  VYLYHCFKPAAQPQPQPPRFNAF----NSSTNRAPPAANPSGAESP------NCDSPGGG 120
           +Y YHC KP         + NAF    N+S ++   AAN +   +         +SPG G
Sbjct: 61  IYFYHCLKPT------KVQLNAFGPNNNNSHSKKTEAANYNDGGATIEGNLGEVESPGEG 120

Query: 121 KRRVHFGTT----REEGMDSNTNGGNNHEK----CPRESELPLSPSISSS 153
           KRRVHFG      ++  +D N +  +  ++     PRE+E+PL  S SSS
Sbjct: 121 KRRVHFGAVVVMEKQPQLDRNYSHESQSKQPTTMSPRETEVPLRSSTSSS 164

[Close]

BLAST of MS007851 vs. NCBI nr
Match: XP_004138999.1 (uncharacterized protein LOC101203715 [Cucumis sativus] >KAE8651759.1 hypothetical protein Csa_006785 [Cucumis sativus])

HSP 1 Score: 141.7 bits (356), Expect = 5.1e-30
Identity = 83/161 (51.55%), Postives = 105/161 (65.22%), Query Frame = 0


Query: 1   MEERKGDARILIISGVIFLCIISGGLLLGLYLYLPQSESTDWYPIVGIVLVATPWIFWLL 60
           MEERKGDARI+IISG+IFLCII GG LL LYL+LP+S+++DWYP +GIVLV+TPWIFWL 
Sbjct: 15  MEERKGDARIVIISGLIFLCIILGGFLLCLYLFLPESQTSDWYPTIGIVLVSTPWIFWLS 74

Query: 61  VYLYHCFKPAAQPQPQPPRFNAFNSSTNRAPPAANPS---GAESPNCD-SPGGGKRRVHF 120
           VY+YHC KP  +    P   N+ NSS+ +   + N     G +    D +PGGGKR+VHF
Sbjct: 75  VYIYHCLKP-TKVLLNPFGSNSINSSSKKTEASKNNEDDVGEDDVGDDETPGGGKRKVHF 134

Query: 121 GTTREEGMDSNTNGGNNHEK-----CPRESELPLSPSISSS 153
           G           +  ++H K      PRE E+PL  S SSS
Sbjct: 135 GAVFVMEKQPTLDRNSSHSKQSTSTSPREPEMPLRLSTSSS 174

[Close]

BLAST of MS007851 vs. ExPASy TrEMBL
Match: A0A6J1DSP4 (uncharacterized protein LOC111022806 OS=Momordica charantia OX=3673 GN=LOC111022806 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 4.1e-78
Identity = 150/152 (98.68%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 1   MEERKGDARILIISGVIFLCIISGGLLLGLYLYLPQSESTDWYPIVGIVLVATPWIFWLL 60
           MEERKGDARILIISGVIFLCIISGGLLLGLYLYLPQSESTDWYPIVGIVLVATPWIFWLL
Sbjct: 5   MEERKGDARILIISGVIFLCIISGGLLLGLYLYLPQSESTDWYPIVGIVLVATPWIFWLL 64

Query: 61  VYLYHCFKPAAQPQPQPPRFNAFNSSTNRAPPAANPSGAESPNCDSPGGGKRRVHFGTTR 120
           VYLYHCFKPAA  QPQPPRFNAFNSSTNRAPPAANPSGAESPNCDSPGGGKRRVHFGTTR
Sbjct: 65  VYLYHCFKPAA--QPQPPRFNAFNSSTNRAPPAANPSGAESPNCDSPGGGKRRVHFGTTR 124

Query: 121 EEGMDSNTNGGNNHEKCPRESELPLSPSISSS 153
           EEGMDSNTNGGNNHEKCPRESELPLSPSISSS
Sbjct: 125 EEGMDSNTNGGNNHEKCPRESELPLSPSISSS 154

[Close]

BLAST of MS007851 vs. ExPASy TrEMBL
Match: A0A6J1KKI3 (uncharacterized protein LOC111494867 OS=Cucurbita maxima OX=3661 GN=LOC111494867 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 1.1e-33
Identity = 85/163 (52.15%), Postives = 109/163 (66.87%), Query Frame = 0


Query: 1   MEERKGDARILIISGVIFLCIISGGLLLGLYLYLPQSESTDWYPIVGIVLVATPWIFWLL 60
           MEERKGDA ILIISG++FLC+++GGLLL LYL++P+SES DWY +VGI+LV+TPWIFW L
Sbjct: 1   MEERKGDATILIISGLMFLCVVAGGLLLCLYLFVPESESQDWYSVVGIILVSTPWIFWFL 60

Query: 61  VYLYHCFKPAAQPQPQPPRFNAFNSSTNRAPPAANPSG--------AESPNCDSPGGGKR 120
           VYLYHC KP    + Q       +SS+NR P AAN SG         ESP+CD+PG GKR
Sbjct: 61  VYLYHCLKPI---RLQSNAALKHSSSSNRPPSAANNSGGIVANLPQVESPDCDTPGDGKR 120

Query: 121 RVHFGTTREEGMDSNTNGGNNHEKCPRE----SELPLSPSISS 152
           RVHFG    +G +      ++H+   +E         SP++SS
Sbjct: 121 RVHFGAVVVKGNNPQGGKKSSHDSSSKELRSNESGATSPTLSS 160

[Close]

BLAST of MS007851 vs. ExPASy TrEMBL
Match: A0A0A0LN77 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G120380 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.5e-30
Identity = 83/161 (51.55%), Postives = 105/161 (65.22%), Query Frame = 0


Query: 1   MEERKGDARILIISGVIFLCIISGGLLLGLYLYLPQSESTDWYPIVGIVLVATPWIFWLL 60
           MEERKGDARI+IISG+IFLCII GG LL LYL+LP+S+++DWYP +GIVLV+TPWIFWL 
Sbjct: 1   MEERKGDARIVIISGLIFLCIILGGFLLCLYLFLPESQTSDWYPTIGIVLVSTPWIFWLS 60

Query: 61  VYLYHCFKPAAQPQPQPPRFNAFNSSTNRAPPAANPS---GAESPNCD-SPGGGKRRVHF 120
           VY+YHC KP  +    P   N+ NSS+ +   + N     G +    D +PGGGKR+VHF
Sbjct: 61  VYIYHCLKP-TKVLLNPFGSNSINSSSKKTEASKNNEDDVGEDDVGDDETPGGGKRKVHF 120

Query: 121 GTTREEGMDSNTNGGNNHEK-----CPRESELPLSPSISSS 153
           G           +  ++H K      PRE E+PL  S SSS
Sbjct: 121 GAVFVMEKQPTLDRNSSHSKQSTSTSPREPEMPLRLSTSSS 160

[Close]

BLAST of MS007851 vs. ExPASy TrEMBL
Match: W9QN73 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_016947 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 4.3e-27
Identity = 73/164 (44.51%), Postives = 97/164 (59.15%), Query Frame = 0


Query: 1   MEERKGDARILIISGVIFLCIISGGLLLGLYLYLPQSESTDWYPIVGIVLVATPWIFWLL 60
           ME+RKGD R+ I+SG  F CI+SGG+ LGLY++LP+++S+ WYPI G++LV+ PW FW  
Sbjct: 1   MEQRKGDVRVYIVSGFFFSCIVSGGVFLGLYMFLPETQSSAWYPIAGMILVSVPWAFWFF 60

Query: 61  VYLYHCFKPAAQPQPQPPRFNAFNSS--TNRAPPAANPSGAESPNCDSP-GGGKRRVHFG 120
            +LY CFK    P   PP+F+       T    P  NP  +ESPN +SP GGG+RRV FG
Sbjct: 61  TFLYRCFK----PDHPPPQFDGSTRDPLTANGSPMTNPMASESPNGESPGGGGERRVQFG 120

Query: 121 TT-----REEG-------MDSNTNGGNNHEKCPRESELPLSPSI 150
                  + EG        D +    N    C RES++PL  SI
Sbjct: 121 PAVVLGGQGEGHAGAATTRDHHEQEANEASNCSRESKMPLRLSI 160

[Close]

BLAST of MS007851 vs. ExPASy TrEMBL
Match: W9R5B5 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_023849 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 2.4e-25
Identity = 79/174 (45.40%), Postives = 102/174 (58.62%), Query Frame = 0


Query: 1   MEERKGDARILIISGVIFLCIISGGLLLGLYLYLPQSESTDWYPIVGIVLVATPWIFWLL 60
           M++R+GD R+ IISG  F CI+SGG+ LGLY++LP++ S+ WYPI G++LV+ PW FW  
Sbjct: 1   MDQREGDVRVYIISGFFFSCIVSGGVFLGLYMFLPETLSSAWYPIAGMILVSVPWAFWFF 60

Query: 61  VYLYHCFKPAAQPQPQ---PPRFNAFNSST------NRAPPAA---NPSGAESPNCDSPG 120
            +LY CFKP   P PQ     RF+   SST      N +P AA   N   +ESPN +SPG
Sbjct: 61  TFLYRCFKP-DHPPPQFDSSARFSKGGSSTRDPSTANGSPIAATATNAMASESPNGESPG 120

Query: 121 GG-KRRVHFGTT-----REEG-------MDSNTNGGNNHEKCPRESELPLSPSI 150
           GG +RRV FG       + EG        D +    N    C RESE+PL  SI
Sbjct: 121 GGSERRVQFGPVVVLGGQGEGHAGAATTRDHHEQEANEASNCSRESEMPLRLSI 173

[Close]

BLAST of MS007851 vs. TAIR 10
Match: AT5G17590.1 (Putative membrane lipoprotein )

HSP 1 Score: 69.3 bits (168), Expect = 3.0e-12
Identity = 53/149 (35.57%), Postives = 76/149 (51.01%), Query Frame = 0


Query: 1   MEERKGDARILIISGVIFLCIISGGLLLGLYLYLPQSESTDWYPIVGIVLVATPWIFWLL 60
           M++RKGD RI II+ +   CI+ GG+LLGLYL   +S+    +   G+V V  PW+FW L
Sbjct: 1   MDQRKGDPRIYIITVLFLSCILIGGVLLGLYLV--RSDPNPLFLQAGMVFVGVPWLFWFL 60

Query: 61  VYLYHC-FKPAAQPQPQPPRFNAFNSST--------NRAPPAANPSGAESPNCDSPGGGK 120
            Y+Y C  KP      Q   FN+ + ++        N+AP     +   +P  +SP  G+
Sbjct: 61  AYVYSCVLKPCVIFVSQSTIFNSKSVTSFDPEKGDPNKAPETVTTTSDPAPR-NSPREGE 120

Query: 121 RRVHFGTT----REEG---MDSNTNGGNN 134
           + V FG       EEG    D N +  NN
Sbjct: 121 KHVQFGNVVVLGDEEGGKEEDHNESSSNN 146

The following BLAST results are available for this feature:

BLAST of MS007851 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155761.1	8.5e-78	98.68	uncharacterized protein LOC111022806 [Momordica charantia]	[more]
XP_023000624.1	2.2e-33	52.15	uncharacterized protein LOC111494867 [Cucurbita maxima]	[more]
KAG7026101.1	6.4e-33	53.38	hypothetical protein SDJN02_12600, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_038875814.1	5.1e-30	50.59	uncharacterized protein LOC120068181 [Benincasa hispida]	[more]
XP_004138999.1	5.1e-30	51.55	uncharacterized protein LOC101203715 [Cucumis sativus] >KAE8651759.1 hypothetica...	[more]

BLAST of MS007851 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS007851 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DSP4	4.1e-78	98.68	uncharacterized protein LOC111022806 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1KKI3	1.1e-33	52.15	uncharacterized protein LOC111494867 OS=Cucurbita maxima OX=3661 GN=LOC111494867...	[more]
A0A0A0LN77	2.5e-30	51.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G120380 PE=4 SV=1	[more]
W9QN73	4.3e-27	44.51	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_016947 PE=4 SV=1	[more]
W9R5B5	2.4e-25	45.40	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_023849 PE=4 SV=1	[more]

BLAST of MS007851 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17590.1	3.0e-12	35.57	Putative membrane lipoprotein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..152
None	No IPR available	PANTHER	PTHR34964	MEMBRANE LIPOPROTEIN-RELATED	coord: 1..135
None	No IPR available	PANTHER	PTHR34964:SF1	MEMBRANE LIPOPROTEIN-RELATED	coord: 1..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS007851.1	MS007851.1	mRNA