MS007848 (gene) Bitter gourd (TR) v1

Overview


Name	MS007848
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	60S ribosomal protein L37a
Location	scaffold13: 1787187 .. 1787940 (+)
RNA-Seq Expression	MS007848
Synteny	MS007848

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAAAGAGAACTAAGAAGGCTGGCATTGTTGGCAAGTACGGTATGTGCTTCTTTCATACATATTACTACTATACGATTGAGAGAATTTGGTTGAAGATTTTCATAGTGGAGAATATCCCGATGATTGCACTGAGAAGGATAAAGAGATATTTATTAATTTATTCCAAATTTGCATTAGTTCTCATATATCATTGAGCCATTTTCTAGTATGTTTGCTGAAAACCCCCATCCCAGCCTCCACCTTCAGAAGAAAAAAATTGTTCTCTTTCTGTTAAAACTTTATCCTGACTCTTGTTCCCTTCTTATCATTATTATAAACATGTTAAATTGCTTTCTTGATTACAGGCACTCGATATGGTGCTAGTTTGAGGAAACAAATCAAGAAGATGGAAGTAAGTCAGCACAGCAAGTACTTCTGCGAGTTTTGCGGAAAGGTATTCTAATTTTTAAATGAATTTCTTTGCATTTTTCGTGACTGAAGGTCATTTGAATCTGGGAATTTGAAATATTTGAACAATATACGTATCCTTTCAGTATGCCGTAAAGAGGAAGGCGGTCGGAATATGGGGCTGCAAAGATTGTGGTAAAGTGAAAGCAGGAGGCGCTTACACCTTGAAGTAAGGACATCTGAATTTCTCTCGATTTTCTTTTCTGTCATCAAGTTTTCCTCAATGTTTTAATTTCATTATGCAGTACTGCAAGTGCCGTCACTGTGAGGAGTACCATAAGAAGGTTGAGGGAGCAGACAGAGAGC

mRNA sequence

ACAAAGAGAACTAAGAAGGCTGGCATTGTTGGCAAGTACGGCACTCGATATGGTGCTAGTTTGAGGAAACAAATCAAGAAGATGGAAGTAAGTCAGCACAGCAAGTACTTCTGCGAGTTTTGCGGAAAGTATGCCGTAAAGAGGAAGGCGGTCGGAATATGGGGCTGCAAAGATTGTGGTAAAGTGAAAGCAGGAGGCGCTTACACCTTGAATACTGCAAGTGCCGTCACTGTGAGGAGTACCATAAGAAGGTTGAGGGAGCAGACAGAGAGC

Coding sequence (CDS)

ACAAAGAGAACTAAGAAGGCTGGCATTGTTGGCAAGTACGGCACTCGATATGGTGCTAGTTTGAGGAAACAAATCAAGAAGATGGAAGTAAGTCAGCACAGCAAGTACTTCTGCGAGTTTTGCGGAAAGTATGCCGTAAAGAGGAAGGCGGTCGGAATATGGGGCTGCAAAGATTGTGGTAAAGTGAAAGCAGGAGGCGCTTACACCTTGAATACTGCAAGTGCCGTCACTGTGAGGAGTACCATAAGAAGGTTGAGGGAGCAGACAGAGAGC

Protein sequence

TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

Homology

[Close]

BLAST of MS007848 vs. NCBI nr
Match: RXI00911.1 (hypothetical protein DVH24_001145 [Malus domestica] >TQD91193.1 hypothetical protein C1H46_023207 [Malus baccata])

HSP 1 Score: 183.3 bits (464), Expect = 9.1e-43
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 60
          TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG
Sbjct: 7  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 66

Query: 61 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 92
          KVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 67 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 97

[Close]

BLAST of MS007848 vs. NCBI nr
Match: KDP45992.1 (hypothetical protein JCGZ_11895 [Jatropha curcas])

HSP 1 Score: 183.3 bits (464), Expect = 9.1e-43
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1   TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 60
           TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG
Sbjct: 34  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 93

Query: 61  KVKAGGAYTLNTASAVTVRSTIRRLREQTES 92
           KVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 94  KVKAGGAYTLNTASAVTVRSTIRRLREQTES 124

[Close]

BLAST of MS007848 vs. NCBI nr
Match: KDO57018.1 (hypothetical protein CISIN_1g044880mg, partial [Citrus sinensis] >PSR91674.1 60S ribosomal protein L37a-1, partial [Actinidia chinensis var. chinensis] >GFA18535.1 60S ribosomal protein L37a [Tanacetum cinerariifolium] >PSR93499.1 60S ribosomal protein L37a-1, partial [Actinidia chinensis var. chinensis] >PSS09675.1 60S ribosomal protein L37a-1, partial [Actinidia chinensis var. chinensis])

HSP 1 Score: 183.3 bits (464), Expect = 9.1e-43
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 60
          TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG
Sbjct: 1  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 60

Query: 61 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 92
          KVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 61 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 91

[Close]

BLAST of MS007848 vs. NCBI nr
Match: KAB2622800.1 (hypothetical protein D8674_024982 [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 183.3 bits (464), Expect = 9.1e-43
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1   TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 60
           TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG
Sbjct: 34  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 93

Query: 61  KVKAGGAYTLNTASAVTVRSTIRRLREQTES 92
           KVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 94  KVKAGGAYTLNTASAVTVRSTIRRLREQTES 124

[Close]

BLAST of MS007848 vs. NCBI nr
Match: KAF4354867.1 (hypothetical protein G4B88_030933 [Cannabis sativa])

HSP 1 Score: 183.3 bits (464), Expect = 9.1e-43
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1   TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 60
           TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG
Sbjct: 16  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 75

Query: 61  KVKAGGAYTLNTASAVTVRSTIRRLREQTES 92
           KVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 76  KVKAGGAYTLNTASAVTVRSTIRRLREQTES 106

[Close]

BLAST of MS007848 vs. ExPASy Swiss-Prot
Match: Q9XHE4 (60S ribosomal protein L37a OS=Gossypium hirsutum OX=3635 GN=RPL37A PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.0e-44
Identity = 90/91 (98.90%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 1  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 60
          TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCK CG
Sbjct: 2  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKACG 61

Query: 61 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 92
          KVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 62 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of MS007848 vs. ExPASy Swiss-Prot
Match: P0DKK1 (60S ribosomal protein L37a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0679700 PE=1 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.3e-44
Identity = 88/91 (96.70%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 60
          TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK+AVKRKAVGIWGCKDCG
Sbjct: 2  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCG 61

Query: 61 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 92
          KVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Sbjct: 62 KVKAGGAYTMNTASAVTVRSTIRRLREQTEA 92

[Close]

BLAST of MS007848 vs. ExPASy Swiss-Prot
Match: P0DKK2 (60S ribosomal protein L37a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0557000 PE=1 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.3e-44
Identity = 88/91 (96.70%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 60
          TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK+AVKRKAVGIWGCKDCG
Sbjct: 2  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCG 61

Query: 61 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 92
          KVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Sbjct: 62 KVKAGGAYTMNTASAVTVRSTIRRLREQTEA 92

[Close]

BLAST of MS007848 vs. ExPASy Swiss-Prot
Match: Q9ZRS8 (60S ribosomal protein L37a OS=Pseudotsuga menziesii OX=3357 GN=RPL37A PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.1e-43
Identity = 87/90 (96.67%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 60
          TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSK+FCEFCGK+AVKRKAVGIWGCKDCG
Sbjct: 2  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKFAVKRKAVGIWGCKDCG 61

Query: 61 KVKAGGAYTLNTASAVTVRSTIRRLREQTE 91
          KVKAGGAYTLNT SAVTVRSTIRRLREQTE
Sbjct: 62 KVKAGGAYTLNTPSAVTVRSTIRRLREQTE 91

[Close]

BLAST of MS007848 vs. ExPASy Swiss-Prot
Match: Q9SRK6 (Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL37AB PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 2.5e-43
Identity = 86/91 (94.51%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 1  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 60
          TKRTKKA IVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGKY+VKRK VGIWGCKDCG
Sbjct: 2  TKRTKKARIVGKYGTRYGASLRKQIKKMEVSQHNKYFCEFCGKYSVKRKVVGIWGCKDCG 61

Query: 61 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 92
          KVKAGGAYT+NTASAVTVRSTIRRLREQTES
Sbjct: 62 KVKAGGAYTMNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of MS007848 vs. ExPASy TrEMBL
Match: A0A1U7XSD1 (60S ribosomal protein L37a OS=Nicotiana sylvestris OX=4096 GN=LOC104239566 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 4.4e-43
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 60
          TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG
Sbjct: 2  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 61

Query: 61 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 92
          KVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 62 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of MS007848 vs. ExPASy TrEMBL
Match: A0A6J1ICH2 (60S ribosomal protein L37a OS=Cucurbita maxima OX=3661 GN=LOC111471808 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 4.4e-43
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 60
          TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG
Sbjct: 2  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 61

Query: 61 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 92
          KVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 62 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of MS007848 vs. ExPASy TrEMBL
Match: K4CND1 (Uncharacterized protein OS=Solanum lycopersicum OX=4081 GN=101251802 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 4.4e-43
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 60
          TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG
Sbjct: 2  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 61

Query: 61 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 92
          KVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 62 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of MS007848 vs. ExPASy TrEMBL
Match: A0A1U8LTA9 (60S ribosomal protein L37a OS=Gossypium hirsutum OX=3635 GN=LOC107929672 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 4.4e-43
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 60
          TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG
Sbjct: 2  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 61

Query: 61 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 92
          KVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 62 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of MS007848 vs. ExPASy TrEMBL
Match: A0A1U8IV94 (60S ribosomal protein L37a isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107900799 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 4.4e-43
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1   TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 60
           TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG
Sbjct: 19  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 78

Query: 61  KVKAGGAYTLNTASAVTVRSTIRRLREQTES 92
           KVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 79  KVKAGGAYTLNTASAVTVRSTIRRLREQTES 109

[Close]

BLAST of MS007848 vs. TAIR 10
Match: AT3G10950.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 175.6 bits (444), Expect = 1.8e-44
Identity = 86/91 (94.51%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 1  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 60
          TKRTKKA IVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGKY+VKRK VGIWGCKDCG
Sbjct: 2  TKRTKKARIVGKYGTRYGASLRKQIKKMEVSQHNKYFCEFCGKYSVKRKVVGIWGCKDCG 61

Query: 61 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 92
          KVKAGGAYT+NTASAVTVRSTIRRLREQTES
Sbjct: 62 KVKAGGAYTMNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of MS007848 vs. TAIR 10
Match: AT3G60245.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 172.9 bits (437), Expect = 1.1e-43
Identity = 84/89 (94.38%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 2  KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGK 61
          KRTKK GIVGKYGTRYGAS+RKQIKKMEVSQHSKYFCEFCGKY VKRKAVGIWGCKDCGK
Sbjct: 3  KRTKKVGIVGKYGTRYGASIRKQIKKMEVSQHSKYFCEFCGKYGVKRKAVGIWGCKDCGK 62

Query: 62 VKAGGAYTLNTASAVTVRSTIRRLREQTE 91
          VKAGGAYT+NTASAVTVRSTIRRLREQ E
Sbjct: 63 VKAGGAYTMNTASAVTVRSTIRRLREQIE 91

The following BLAST results are available for this feature:

BLAST of MS007848 vs. NCBI nr


Match Name	E-value	Identity	Description
RXI00911.1	9.1e-43	100.00	hypothetical protein DVH24_001145 [Malus domestica] >TQD91193.1 hypothetical pro...	[more]
KDP45992.1	9.1e-43	100.00	hypothetical protein JCGZ_11895 [Jatropha curcas]	[more]
KDO57018.1	9.1e-43	100.00	hypothetical protein CISIN_1g044880mg, partial [Citrus sinensis] >PSR91674.1 60S...	[more]
KAB2622800.1	9.1e-43	100.00	hypothetical protein D8674_024982 [Pyrus ussuriensis x Pyrus communis]	[more]
KAF4354867.1	9.1e-43	100.00	hypothetical protein G4B88_030933 [Cannabis sativa]	[more]

BLAST of MS007848 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XHE4	1.0e-44	98.90	60S ribosomal protein L37a OS=Gossypium hirsutum OX=3635 GN=RPL37A PE=3 SV=1	[more]
P0DKK1	1.3e-44	96.70	60S ribosomal protein L37a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g06...	[more]
P0DKK2	1.3e-44	96.70	60S ribosomal protein L37a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g05...	[more]
Q9ZRS8	1.1e-43	96.67	60S ribosomal protein L37a OS=Pseudotsuga menziesii OX=3357 GN=RPL37A PE=3 SV=1	[more]
Q9SRK6	2.5e-43	94.51	Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL37AB...	[more]

BLAST of MS007848 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1U7XSD1	4.4e-43	100.00	60S ribosomal protein L37a OS=Nicotiana sylvestris OX=4096 GN=LOC104239566 PE=3 ...	[more]
A0A6J1ICH2	4.4e-43	100.00	60S ribosomal protein L37a OS=Cucurbita maxima OX=3661 GN=LOC111471808 PE=3 SV=1	[more]
K4CND1	4.4e-43	100.00	Uncharacterized protein OS=Solanum lycopersicum OX=4081 GN=101251802 PE=3 SV=1	[more]
A0A1U8LTA9	4.4e-43	100.00	60S ribosomal protein L37a OS=Gossypium hirsutum OX=3635 GN=LOC107929672 PE=3 SV...	[more]
A0A1U8IV94	4.4e-43	100.00	60S ribosomal protein L37a isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107900...	[more]

BLAST of MS007848 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10950.1	1.8e-44	94.51	Zinc-binding ribosomal protein family protein	[more]
AT3G60245.1	1.1e-43	94.38	Zinc-binding ribosomal protein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 82..91
None	No IPR available	PANTHER	PTHR48132:SF2	60S RIBOSOMAL PROTEIN L37A-2	coord: 1..91
None	No IPR available	PANTHER	PTHR48132	ZGC:171772	coord: 1..91
IPR002674	Ribosomal protein L37ae	PFAM	PF01780	Ribosomal_L37ae	coord: 3..87 e-value: 1.7E-39 score: 133.7
IPR002674	Ribosomal protein L37ae	TIGRFAM	TIGR00280	TIGR00280	coord: 2..90 e-value: 8.3E-34 score: 113.8
IPR002674	Ribosomal protein L37ae	HAMAP	MF_00327	Ribosomal_L37Ae	coord: 3..71 score: 19.305292
IPR011331	Ribosomal protein L37ae/L37e	GENE3D	2.20.25.30		coord: 1..91 e-value: 4.0E-44 score: 150.6
IPR011332	Zinc-binding ribosomal protein	SUPERFAMILY	57829	Zn-binding ribosomal proteins	coord: 9..81

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS007848.1	MS007848.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome