MS007810 (gene) Bitter gourd (TR) v1

Overview


Name	MS007810
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	high mobility group B protein 15-like
Location	scaffold13: 1461937 .. 1464584 (+)
RNA-Seq Expression	MS007810
Synteny	MS007810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGAAGAGGAAAGGACAGAGGCAGGCTGGGGTAGTAGGAAGGAGTTGACAATGGCATCGACTTCTTTTCCTGGCGGGAAGCCATTGCCAGTGATTGAAACTTCTTCTAACTGTGTTCTGTACCCACCGCCACAAGCGACGTATGAGGATATCATAGGCAATCCCAAGATCTTCATGACATCCCTGGAAAAGCTCCATTCTATCATGGGAACCAAGTTCATGTAATTTTCTCAAACATCGGATACTGCTTTAAGTAGATAGAAGCCTGATTCTGTCTCATATTTCTGGTCTTGACATGAAAGTAAAATCTGCTTTTTATCGTGTGAAAGATTTTTCTGTATTTATTACGTTGCCTTTTAGGTGCAATTAGATTCTGTTTTTCACTTTTACGTCCCCAAACTGCAGGATCCCCATTATTGGAGGTAAAGAACTAGACCTGCATCGGCTTTTTGTGGAGGTCACATCTCGTGGTGGCATTGAGAAGGTAAAATGCTATGAATCTTGTGAATCAATGTTTTGACCTTGGAGTTGAGAATTTTTCTTTATAACTTTACAAGGCAAATTGAAGATGGTTATCTGAGCCTACTGTTTCATTACATGTTTTGGTTTCTTAAATGGAAAAAGTGCCTGGATTTCTCTGGCATGATAAATATTCCCACCTAATGAGTTCCTCTTTTGGGTTGATTATATTATTAAAGCGTCGATGAAGTGAAAATCGAGTGCTGTGCCAAAAAGCCTCAATGGTGATTGGTCTTTGGACCCATAGTGGTTTCTTGCTTGCCCATTGGCGGAGGTAGGATAGGATTTGGAGCCTATATCCACAATGCCGCGAGAAATGTCATACATTCTTGCTCCAAATTGGAGAGATATATAGCTCCTTAAGTTATCGTTTGGGCTTCATTTACAATGACATTGTGTTGTGCTATTGCATTTTTGCCATAGTTTTTGCTTCTATGATGTTCCTTCTCCAGGGTTGATGGGTAAAAGTTGAAACGTTCTAGTAACATTGGAAACACACCGTTTGTTTCGAAATCATATAATCATGTGACATGTTCGTGTAACAATCTGTATTTAACAGGTTATAAGGGAGAGAAGATGGAAAGAAGTAACATCGGTTTTCAACTTTCCTTCAACTGCAACGAATGCATCTTTTGTTCTGAGGAAGTATTATCTTTCTTTGCTTCATCATTTCGAGCAGATTCACTTCTTCAAAGCTGTGGGATGGACGCCAATGATTTCTGGCAAGTGTCAATAGAGTGCCTTTTTTTATTTCTTTGTAGAAATCCATATCCTGACATTGATTTTCTAACATAACAACCTTTCAGATTCTCCTCAGTGCCCGAGCCCAGCGCCGATCCCTACGCAAGGGACGCCCTCTATGTGGCCACCATCAGATAATCAGGCAGCCATGTCCCAGCAACCGCGGACTTCCACTACCGAACTTCCAGCAGGTGCATTCTATGGTCTTTTAGAAATAGGCACAGAAAATAAATCAAAACAATACTTTGGTGTGCCTCGACACCTGCTTTACGATTGTGATTTCTGTCTGTGCTTGCTTTGTATTTCAATGATGCTCGGGTTCTCTTGTTGAATGTTGAAGCTGTGAACAGCTTCTGATCAATAATTAGATAGTACTTTTCTCCCTACAGTTGCACCAAGTTCGGCGTCAGCAGCAGGGTTTCCGGTGATTGGAGTCATTGATGGAAAATTTGATAGCGGGTATCTTGTTACTGTTACCATAGGATCGGAGAAGCTAAAAGGCGTGCTTTATCAGTCTCCTCCCGAGCAACCTGCTCAGCAACAAGTATTGCAGCCTGATGGTGTTTTTGCCAAAGATGGTGCTACCTCCATGGCACCAAATGCTCATCGCCGTCGTCGTAGGAAGAAATCCGAGATAAAACGAAGGGATCCTGCTCATCCAAAGCCGAACAGAAGCGGCTACAACTTTTTCTTTGCTGAGCAGCACGCTAGACTCAAACCATTATACCCAGGGAAGGACAGAGAGATAAGTAGAATGATTGGTGAGCTTTGGAATAAGCTTAATGAGTCAGACAGAACAGTAAGGACTGCAATACTCTTATACTTTTAAGGATCAGTCTCATCTTCAGTAGTACCCGGTGTCTGATAATCATCTTCACTTGCAGGTTTATCAAGAGAAAGCCATGAAGGATAAAGAAAGATATCGAATCGAGATGGAGGATTACCGAGAGAAGCTGAGGACGGGCCAGGTCATCAGTGATGCCGTGCCATTACAACAGCGTCTTCCTGAGCCAGACCTGAACATGGTCTATGCTGACAAAAATGAAGAAACTGAGGGTGGCGAATCTCCTCAAACCCCGGATCATGATACTAGTTACGTCGAAGGTGACTCCGGAGAATATAAAACTGAGGAGAAGGAGGAGGATGAGGAAGAGGATTCGGAAGAAGATGCATCTCCACAAGGGGTTGGCAATGTAGATGTTAACGTTTTGGTCGAGGAGGAAGACGGCGGCGAGACGAGAGCTGCAGAAGAGGATGTTAGAAAAGAGAGTAGTACAGTGGTGGTCGGCGACGAGAAAGAAGTTTTCACCAGAGATTCGTTAATGGAGGAGGCAAAGGAAGAACCAGAACCACCACCACCACCAACAACAGCCATTAGAGAAGAT

mRNA sequence

ATGGTAGAAGAGGAAAGGACAGAGGCAGGCTGGGGTAGTAGGAAGGAGTTGACAATGGCATCGACTTCTTTTCCTGGCGGGAAGCCATTGCCAGTGATTGAAACTTCTTCTAACTGTGTTCTGTACCCACCGCCACAAGCGACGTATGAGGATATCATAGGCAATCCCAAGATCTTCATGACATCCCTGGAAAAGCTCCATTCTATCATGGGAACCAAGTTCATGATCCCCATTATTGGAGGTAAAGAACTAGACCTGCATCGGCTTTTTGTGGAGGTCACATCTCGTGGTGGCATTGAGAAGGTTATAAGGGAGAGAAGATGGAAAGAAGTAACATCGGTTTTCAACTTTCCTTCAACTGCAACGAATGCATCTTTTGTTCTGAGGAAGTATTATCTTTCTTTGCTTCATCATTTCGAGCAGATTCACTTCTTCAAAGCTGTGGGATGGACGCCAATGATTTCTGGCAAGTATTCTCCTCAGTGCCCGAGCCCAGCGCCGATCCCTACGCAAGGGACGCCCTCTATGTGGCCACCATCAGATAATCAGGCAGCCATGTCCCAGCAACCGCGGACTTCCACTACCGAACTTCCAGCAGTTGCACCAAGTTCGGCGTCAGCAGCAGGGTTTCCGGTGATTGGAGTCATTGATGGAAAATTTGATAGCGGGTATCTTGTTACTGTTACCATAGGATCGGAGAAGCTAAAAGGCGTGCTTTATCAGTCTCCTCCCGAGCAACCTGCTCAGCAACAAGTATTGCAGCCTGATGGTGTTTTTGCCAAAGATGGTGCTACCTCCATGGCACCAAATGCTCATCGCCGTCGTCGTAGGAAGAAATCCGAGATAAAACGAAGGGATCCTGCTCATCCAAAGCCGAACAGAAGCGGCTACAACTTTTTCTTTGCTGAGCAGCACGCTAGACTCAAACCATTATACCCAGGGAAGGACAGAGAGATAAGTAGAATGATTGGTGAGCTTTGGAATAAGCTTAATGAGTCAGACAGAACAGTTTATCAAGAGAAAGCCATGAAGGATAAAGAAAGATATCGAATCGAGATGGAGGATTACCGAGAGAAGCTGAGGACGGGCCAGGTCATCAGTGATGCCGTGCCATTACAACAGCGTCTTCCTGAGCCAGACCTGAACATGGTCTATGCTGACAAAAATGAAGAAACTGAGGGTGGCGAATCTCCTCAAACCCCGGATCATGATACTAGTTACGTCGAAGGTGACTCCGGAGAATATAAAACTGAGGAGAAGGAGGAGGATGAGGAAGAGGATTCGGAAGAAGATGCATCTCCACAAGGGGTTGGCAATGTAGATGTTAACGTTTTGGTCGAGGAGGAAGACGGCGGCGAGACGAGAGCTGCAGAAGAGGATGTTAGAAAAGAGAGTAGTACAGTGGTGGTCGGCGACGAGAAAGAAGTTTTCACCAGAGATTCGTTAATGGAGGAGGCAAAGGAAGAACCAGAACCACCACCACCACCAACAACAGCCATTAGAGAAGAT

Coding sequence (CDS)

ATGGTAGAAGAGGAAAGGACAGAGGCAGGCTGGGGTAGTAGGAAGGAGTTGACAATGGCATCGACTTCTTTTCCTGGCGGGAAGCCATTGCCAGTGATTGAAACTTCTTCTAACTGTGTTCTGTACCCACCGCCACAAGCGACGTATGAGGATATCATAGGCAATCCCAAGATCTTCATGACATCCCTGGAAAAGCTCCATTCTATCATGGGAACCAAGTTCATGATCCCCATTATTGGAGGTAAAGAACTAGACCTGCATCGGCTTTTTGTGGAGGTCACATCTCGTGGTGGCATTGAGAAGGTTATAAGGGAGAGAAGATGGAAAGAAGTAACATCGGTTTTCAACTTTCCTTCAACTGCAACGAATGCATCTTTTGTTCTGAGGAAGTATTATCTTTCTTTGCTTCATCATTTCGAGCAGATTCACTTCTTCAAAGCTGTGGGATGGACGCCAATGATTTCTGGCAAGTATTCTCCTCAGTGCCCGAGCCCAGCGCCGATCCCTACGCAAGGGACGCCCTCTATGTGGCCACCATCAGATAATCAGGCAGCCATGTCCCAGCAACCGCGGACTTCCACTACCGAACTTCCAGCAGTTGCACCAAGTTCGGCGTCAGCAGCAGGGTTTCCGGTGATTGGAGTCATTGATGGAAAATTTGATAGCGGGTATCTTGTTACTGTTACCATAGGATCGGAGAAGCTAAAAGGCGTGCTTTATCAGTCTCCTCCCGAGCAACCTGCTCAGCAACAAGTATTGCAGCCTGATGGTGTTTTTGCCAAAGATGGTGCTACCTCCATGGCACCAAATGCTCATCGCCGTCGTCGTAGGAAGAAATCCGAGATAAAACGAAGGGATCCTGCTCATCCAAAGCCGAACAGAAGCGGCTACAACTTTTTCTTTGCTGAGCAGCACGCTAGACTCAAACCATTATACCCAGGGAAGGACAGAGAGATAAGTAGAATGATTGGTGAGCTTTGGAATAAGCTTAATGAGTCAGACAGAACAGTTTATCAAGAGAAAGCCATGAAGGATAAAGAAAGATATCGAATCGAGATGGAGGATTACCGAGAGAAGCTGAGGACGGGCCAGGTCATCAGTGATGCCGTGCCATTACAACAGCGTCTTCCTGAGCCAGACCTGAACATGGTCTATGCTGACAAAAATGAAGAAACTGAGGGTGGCGAATCTCCTCAAACCCCGGATCATGATACTAGTTACGTCGAAGGTGACTCCGGAGAATATAAAACTGAGGAGAAGGAGGAGGATGAGGAAGAGGATTCGGAAGAAGATGCATCTCCACAAGGGGTTGGCAATGTAGATGTTAACGTTTTGGTCGAGGAGGAAGACGGCGGCGAGACGAGAGCTGCAGAAGAGGATGTTAGAAAAGAGAGTAGTACAGTGGTGGTCGGCGACGAGAAAGAAGTTTTCACCAGAGATTCGTTAATGGAGGAGGCAAAGGAAGAACCAGAACCACCACCACCACCAACAACAGCCATTAGAGAAGAT

Protein sequence

MVEEERTEAGWGSRKELTMASTSFPGGKPLPVIETSSNCVLYPPPQATYEDIIGNPKIFMTSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMISGKYSPQCPSPAPIPTQGTPSMWPPSDNQAAMSQQPRTSTTELPAVAPSSASAAGFPVIGVIDGKFDSGYLVTVTIGSEKLKGVLYQSPPEQPAQQQVLQPDGVFAKDGATSMAPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGELWNKLNESDRTVYQEKAMKDKERYRIEMEDYREKLRTGQVISDAVPLQQRLPEPDLNMVYADKNEETEGGESPQTPDHDTSYVEGDSGEYKTEEKEEDEEEDSEEDASPQGVGNVDVNVLVEEEDGGETRAAEEDVRKESSTVVVGDEKEVFTRDSLMEEAKEEPEPPPPPTTAIRED

Homology

[Close]

BLAST of MS007810 vs. NCBI nr
Match: XP_022138724.1 (high mobility group B protein 15 isoform X2 [Momordica charantia])

HSP 1 Score: 958.7 bits (2477), Expect = 1.9e-275
Identity = 498/504 (98.81%), Postives = 498/504 (98.81%), Query Frame = 0


Query: 1   MVEEERTEAGWGSRKELTMASTSFPGGKPLPVIETSSNCVLYPPPQATYEDIIGNPKIFM 60
           MVEEERTEAGWGSRKELTMASTSFPGGKPLPVIETSSNCVLYPPPQATYEDIIGNPKIFM
Sbjct: 1   MVEEERTEAGWGSRKELTMASTSFPGGKPLPVIETSSNCVLYPPPQATYEDIIGNPKIFM 60

Query: 61  TSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120
           TSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST
Sbjct: 61  TSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120

Query: 121 ATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMISGKYSPQCPSPAPIPTQGTPSMWPPS 180
           ATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMIS   SPQCPSPAPIPTQGTPSMWPPS
Sbjct: 121 ATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMISD--SPQCPSPAPIPTQGTPSMWPPS 180

Query: 181 DNQAAMSQQPRTSTTELPAVAPSSASAAGFPVIGVIDGKFDSGYLVTVTIGSEKLKGVLY 240
           DNQAAMSQQPRTSTTELPAVAPSSASAAGFPVIGVIDGKFDSGYLVTVTIGSEKLKGVLY
Sbjct: 181 DNQAAMSQQPRTSTTELPAVAPSSASAAGFPVIGVIDGKFDSGYLVTVTIGSEKLKGVLY 240

Query: 241 QSPPEQPAQQQVLQPDGVFAKDGATSMAPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFF 300
           QSPPEQPAQQQVLQPDGVFAKDGATSMAPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFF
Sbjct: 241 QSPPEQPAQQQVLQPDGVFAKDGATSMAPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFF 300

Query: 301 FAEQHARLKPLYPGKDREISRMIGELWNKLNESDRTVYQEKAMKDKERYRIEMEDYREKL 360
           FAEQHARLKPLYPGKDREISRMIGELWNKLNESDRTVYQEKAMKDKERYRIEMEDYREKL
Sbjct: 301 FAEQHARLKPLYPGKDREISRMIGELWNKLNESDRTVYQEKAMKDKERYRIEMEDYREKL 360

Query: 361 RTGQVISDAVPLQQRLPEPDLNMVYADKNEETEGGESPQTPDHDTSYVEGDSGEYKTEEK 420
           RTGQVISDAVPLQQRLPEPDLNMVYADKNEETEGGESPQTPDHDTSYVEGDSGEYKTEEK
Sbjct: 361 RTGQVISDAVPLQQRLPEPDLNMVYADKNEETEGGESPQTPDHDTSYVEGDSGEYKTEEK 420

Query: 421 EEDEEEDSEEDASPQGVGNVDVNVLVEEEDGGETRAAEEDVRKESSTVVVGDEKEVFTRD 480
           EEDEEEDSEEDASPQ VGNVDVNVLVEEE GGETRAAEEDVRKESSTVVVGDEKEVFTRD
Sbjct: 421 EEDEEEDSEEDASPQRVGNVDVNVLVEEEGGGETRAAEEDVRKESSTVVVGDEKEVFTRD 480

Query: 481 SLMEEAKEEPE-PPPPPTTAIRED 504
           SLMEEAKEEPE PPPPPTTAIRED
Sbjct: 481 SLMEEAKEEPEPPPPPPTTAIRED 502

[Close]

BLAST of MS007810 vs. NCBI nr
Match: XP_022138716.1 (high mobility group B protein 15 isoform X1 [Momordica charantia] >XP_022138718.1 high mobility group B protein 15 isoform X1 [Momordica charantia] >XP_022138719.1 high mobility group B protein 15 isoform X1 [Momordica charantia] >XP_022138720.1 high mobility group B protein 15 isoform X1 [Momordica charantia] >XP_022138721.1 high mobility group B protein 15 isoform X1 [Momordica charantia] >XP_022138722.1 high mobility group B protein 15 isoform X1 [Momordica charantia] >XP_022138723.1 high mobility group B protein 15 isoform X1 [Momordica charantia])

HSP 1 Score: 951.8 bits (2459), Expect = 2.3e-273
Identity = 498/511 (97.46%), Postives = 498/511 (97.46%), Query Frame = 0


Query: 1   MVEEERTEAGWGSRKELTMASTSFPGGKPLPVIETSSNCVLYPPPQATYEDIIGNPKIFM 60
           MVEEERTEAGWGSRKELTMASTSFPGGKPLPVIETSSNCVLYPPPQATYEDIIGNPKIFM
Sbjct: 1   MVEEERTEAGWGSRKELTMASTSFPGGKPLPVIETSSNCVLYPPPQATYEDIIGNPKIFM 60

Query: 61  TSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120
           TSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST
Sbjct: 61  TSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120

Query: 121 ATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMISGKYSPQCPSPAPIPTQGTPSMWPPS 180
           ATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMIS   SPQCPSPAPIPTQGTPSMWPPS
Sbjct: 121 ATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMISD--SPQCPSPAPIPTQGTPSMWPPS 180

Query: 181 DNQAAMSQQPRTSTTELPA-------VAPSSASAAGFPVIGVIDGKFDSGYLVTVTIGSE 240
           DNQAAMSQQPRTSTTELPA       VAPSSASAAGFPVIGVIDGKFDSGYLVTVTIGSE
Sbjct: 181 DNQAAMSQQPRTSTTELPADSTFLPTVAPSSASAAGFPVIGVIDGKFDSGYLVTVTIGSE 240

Query: 241 KLKGVLYQSPPEQPAQQQVLQPDGVFAKDGATSMAPNAHRRRRRKKSEIKRRDPAHPKPN 300
           KLKGVLYQSPPEQPAQQQVLQPDGVFAKDGATSMAPNAHRRRRRKKSEIKRRDPAHPKPN
Sbjct: 241 KLKGVLYQSPPEQPAQQQVLQPDGVFAKDGATSMAPNAHRRRRRKKSEIKRRDPAHPKPN 300

Query: 301 RSGYNFFFAEQHARLKPLYPGKDREISRMIGELWNKLNESDRTVYQEKAMKDKERYRIEM 360
           RSGYNFFFAEQHARLKPLYPGKDREISRMIGELWNKLNESDRTVYQEKAMKDKERYRIEM
Sbjct: 301 RSGYNFFFAEQHARLKPLYPGKDREISRMIGELWNKLNESDRTVYQEKAMKDKERYRIEM 360

Query: 361 EDYREKLRTGQVISDAVPLQQRLPEPDLNMVYADKNEETEGGESPQTPDHDTSYVEGDSG 420
           EDYREKLRTGQVISDAVPLQQRLPEPDLNMVYADKNEETEGGESPQTPDHDTSYVEGDSG
Sbjct: 361 EDYREKLRTGQVISDAVPLQQRLPEPDLNMVYADKNEETEGGESPQTPDHDTSYVEGDSG 420

Query: 421 EYKTEEKEEDEEEDSEEDASPQGVGNVDVNVLVEEEDGGETRAAEEDVRKESSTVVVGDE 480
           EYKTEEKEEDEEEDSEEDASPQ VGNVDVNVLVEEE GGETRAAEEDVRKESSTVVVGDE
Sbjct: 421 EYKTEEKEEDEEEDSEEDASPQRVGNVDVNVLVEEEGGGETRAAEEDVRKESSTVVVGDE 480

Query: 481 KEVFTRDSLMEEAKEEPE-PPPPPTTAIRED 504
           KEVFTRDSLMEEAKEEPE PPPPPTTAIRED
Sbjct: 481 KEVFTRDSLMEEAKEEPEPPPPPPTTAIRED 509

[Close]

BLAST of MS007810 vs. NCBI nr
Match: XP_038876011.1 (LOW QUALITY PROTEIN: high mobility group B protein 15-like [Benincasa hispida])

HSP 1 Score: 780.4 bits (2014), Expect = 9.3e-222
Identity = 423/511 (82.78%), Postives = 452/511 (88.45%), Query Frame = 0


Query: 1   MVEEERTEAGWGSRKELTMASTSFPGGKPLPVIETSSNCVLYPPPQATYEDIIGNPKIFM 60
           M+EEERTEA WG RKELTMASTSF GGK LP IE SSNCV YPPPQ TY+DI+ NPKIFM
Sbjct: 72  MIEEERTEASWGIRKELTMASTSFAGGKQLPAIEVSSNCVPYPPPQTTYDDIVANPKIFM 131

Query: 61  TSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120
           TSLEKLHS+MGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST
Sbjct: 132 TSLEKLHSVMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 191

Query: 121 ATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMISGKYSPQCPSPAPIPTQGTPSMWPPS 180
           ATNASFVLRKYYLSLLHHFEQI+FFKAVGWTP IS   S  CPS A IPTQ   SM PPS
Sbjct: 192 ATNASFVLRKYYLSLLHHFEQIYFFKAVGWTPQISD--SSTCPSAATIPTQAMTSMLPPS 251

Query: 181 DNQAAMSQQPRTSTTELPAVAPSSAS-AAGFPVIGVIDGKFDSGYLVTVTIGSEKLKGVL 240
           +NQAA SQQPR++ TELPAVAPSS S A GFPVIGVIDGKFDSGYLVTVT+G+EKLKGVL
Sbjct: 252 ENQAA-SQQPRSTATELPAVAPSSTSPAGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVL 311

Query: 241 YQSPPEQPAQQQVLQPDGVFAKDGATSMAPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNF 300
           YQ+P EQP++QQVLQ  G FAKD ATS  PNAHRRRRRKKSEIKRRDPAHPKPNRSGYNF
Sbjct: 312 YQAPSEQPSEQQVLQSVGAFAKDVATSTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNF 371

Query: 301 FFAEQHARLKPLYPGKDREISRMIGELWNKLNESDRTVYQEKAMKDKERYRIEMEDYREK 360
           FFAEQHARLKPLYPGKDREISRMIG+LWNKL ES+RTVYQEKAMKDKERYR+EMEDYREK
Sbjct: 372 FFAEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRVEMEDYREK 431

Query: 361 LRTGQVISDAVPLQQRLPEPDLNMVYADKNEETEGGESPQTPDHDTSYVEGDSGEYKTEE 420
           LRTGQ+ISDAVPLQQRLPEPDLNMVYADKNEETEGGES QTPD+DTSYVEGDSGEYKTEE
Sbjct: 432 LRTGQIISDAVPLQQRLPEPDLNMVYADKNEETEGGES-QTPDNDTSYVEGDSGEYKTEE 491

Query: 421 KEEDEE------EDSEEDASPQGVGNVDVNVLVEEEDGGETRAAEED-VRKESSTVVVGD 480
           KEE+EE      EDSEEDASPQG+GNVDVN+L EEE   ET+ AEED VRKESS  +V D
Sbjct: 492 KEEEEEEEEEDSEDSEEDASPQGIGNVDVNILAEEEQ-CETKTAEEDAVRKESS--MVRD 551

Query: 481 EKEVFTRDSLMEEAKEEPEPPPPPTTAIRED 504
           +KEV+  DS+M E + + E  P PTT+IRED
Sbjct: 552 DKEVYAGDSVMMEVEAKTE--PEPTTSIRED 573

[Close]

BLAST of MS007810 vs. NCBI nr
Match: XP_011649091.1 (high mobility group B protein 15 isoform X2 [Cucumis sativus])

HSP 1 Score: 772.3 bits (1993), Expect = 2.5e-219
Identity = 421/516 (81.59%), Postives = 447/516 (86.63%), Query Frame = 0


Query: 1   MVEEERTEAGWGSRKELTMASTSFPGGKPLPVIETSSNCVLYPPPQATYEDIIGNPKIFM 60
           M+EEERTEAGWGSRKELTMASTSF GGK LPVIE +SNCV YPPPQ TYEDII N KIFM
Sbjct: 69  MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFM 128

Query: 61  TSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120
           T+LEKLHS+MGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST
Sbjct: 129 TALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 188

Query: 121 ATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMISGKYSPQCPSPAPIPTQGTPSMWPPS 180
           ATNASFVLRKYY+SLLHHFEQI+FFKAVGWTP+ S   S  CPS + IPTQG  SM PPS
Sbjct: 189 ATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSD--SSPCPSASAIPTQGVTSMLPPS 248

Query: 181 DNQAAMSQQPRTSTTELPAVAPSSAS-AAGFPVIGVIDGKFDSGYLVTVTIGSEKLKGVL 240
           DNQAA S QP+++ TELPAV+PSS S   GFPVIGVIDGKFDSGYLVTVT+G+EKLKGVL
Sbjct: 249 DNQAA-SHQPQSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVL 308

Query: 241 YQSPPEQPAQQQVLQPDGVFAKDGATSMAPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNF 300
           YQ+ PEQP+Q QVLQP G FAKDG+T   PNAHRRRRRKKSEIKRRDPAHPKPNRSGYNF
Sbjct: 309 YQA-PEQPSQPQVLQPVGAFAKDGSTPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNF 368

Query: 301 FFAEQHARLKPLYPGKDREISRMIGELWNKLNESDRTVYQEKAMKDKERYRIEMEDYREK 360
           FFAEQHARLKPLYPGKDREISRMIG+LWNKL ES+RTVYQEKAMKDKERYRIEM DYREK
Sbjct: 369 FFAEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREK 428

Query: 361 LRTGQVISDAVPLQQRLPEPDLNMVYADKNEETEGGESPQTPDHDTSYVEGDSGEYKTEE 420
           LRTGQ+ISDAVPLQQRLPEPDLNMVY DKNEETEGGES QTPDHDTSYVEGDSGEYKTEE
Sbjct: 429 LRTGQIISDAVPLQQRLPEPDLNMVYGDKNEETEGGES-QTPDHDTSYVEGDSGEYKTEE 488

Query: 421 K-------EEDEEEDSEEDASPQGVGNVDVNVLVEEEDGGETRAAEEDVRKESSTVVVGD 480
           K       EEDEE+DSEEDASPQG+GNVDVN+LVEEE         E+VRKESST  VGD
Sbjct: 489 KEEDEEDDEEDEEDDSEEDASPQGIGNVDVNILVEEEQCETRTTGVENVRKESST--VGD 548

Query: 481 EKEVFTRDSLM--EEAKEEPEP---PPPPTTAIRED 504
           +KEV   DS+M   EAKE PEP    P    AIRED
Sbjct: 549 KKEVLAGDSVMVEVEAKEVPEPTTAEPTTAAAIRED 577

[Close]

BLAST of MS007810 vs. NCBI nr
Match: XP_004139006.2 (high mobility group B protein 15 isoform X5 [Cucumis sativus] >XP_011649099.1 high mobility group B protein 15 isoform X5 [Cucumis sativus] >XP_031737002.1 high mobility group B protein 15 isoform X5 [Cucumis sativus] >XP_031737003.1 high mobility group B protein 15 isoform X5 [Cucumis sativus] >XP_031737004.1 high mobility group B protein 15 isoform X5 [Cucumis sativus] >XP_031737005.1 high mobility group B protein 15 isoform X5 [Cucumis sativus] >XP_031737006.1 high mobility group B protein 15 isoform X5 [Cucumis sativus] >XP_031737007.1 high mobility group B protein 15 isoform X5 [Cucumis sativus] >KGN61472.1 hypothetical protein Csa_006764 [Cucumis sativus])

HSP 1 Score: 772.3 bits (1993), Expect = 2.5e-219
Identity = 421/516 (81.59%), Postives = 447/516 (86.63%), Query Frame = 0


Query: 1   MVEEERTEAGWGSRKELTMASTSFPGGKPLPVIETSSNCVLYPPPQATYEDIIGNPKIFM 60
           M+EEERTEAGWGSRKELTMASTSF GGK LPVIE +SNCV YPPPQ TYEDII N KIFM
Sbjct: 1   MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFM 60

Query: 61  TSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120
           T+LEKLHS+MGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST
Sbjct: 61  TALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120

Query: 121 ATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMISGKYSPQCPSPAPIPTQGTPSMWPPS 180
           ATNASFVLRKYY+SLLHHFEQI+FFKAVGWTP+ S   S  CPS + IPTQG  SM PPS
Sbjct: 121 ATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSD--SSPCPSASAIPTQGVTSMLPPS 180

Query: 181 DNQAAMSQQPRTSTTELPAVAPSSAS-AAGFPVIGVIDGKFDSGYLVTVTIGSEKLKGVL 240
           DNQAA S QP+++ TELPAV+PSS S   GFPVIGVIDGKFDSGYLVTVT+G+EKLKGVL
Sbjct: 181 DNQAA-SHQPQSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVL 240

Query: 241 YQSPPEQPAQQQVLQPDGVFAKDGATSMAPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNF 300
           YQ+ PEQP+Q QVLQP G FAKDG+T   PNAHRRRRRKKSEIKRRDPAHPKPNRSGYNF
Sbjct: 241 YQA-PEQPSQPQVLQPVGAFAKDGSTPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNF 300

Query: 301 FFAEQHARLKPLYPGKDREISRMIGELWNKLNESDRTVYQEKAMKDKERYRIEMEDYREK 360
           FFAEQHARLKPLYPGKDREISRMIG+LWNKL ES+RTVYQEKAMKDKERYRIEM DYREK
Sbjct: 301 FFAEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREK 360

Query: 361 LRTGQVISDAVPLQQRLPEPDLNMVYADKNEETEGGESPQTPDHDTSYVEGDSGEYKTEE 420
           LRTGQ+ISDAVPLQQRLPEPDLNMVY DKNEETEGGES QTPDHDTSYVEGDSGEYKTEE
Sbjct: 361 LRTGQIISDAVPLQQRLPEPDLNMVYGDKNEETEGGES-QTPDHDTSYVEGDSGEYKTEE 420

Query: 421 K-------EEDEEEDSEEDASPQGVGNVDVNVLVEEEDGGETRAAEEDVRKESSTVVVGD 480
           K       EEDEE+DSEEDASPQG+GNVDVN+LVEEE         E+VRKESST  VGD
Sbjct: 421 KEEDEEDDEEDEEDDSEEDASPQGIGNVDVNILVEEEQCETRTTGVENVRKESST--VGD 480

Query: 481 EKEVFTRDSLM--EEAKEEPEP---PPPPTTAIRED 504
           +KEV   DS+M   EAKE PEP    P    AIRED
Sbjct: 481 KKEVLAGDSVMVEVEAKEVPEPTTAEPTTAAAIRED 509

[Close]

BLAST of MS007810 vs. ExPASy Swiss-Prot
Match: Q9MAT6 (High mobility group B protein 15 OS=Arabidopsis thaliana OX=3702 GN=HMGB15 PE=2 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 9.4e-108
Identity = 239/440 (54.32%), Postives = 297/440 (67.50%), Query Frame = 0


Query: 45  PQATYEDIIGNPKIFMTSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIR 104
           P+ATYE ++ +P++FMTSLE+LHS++GTKFM+PIIGG++LDLH+LFVEVTSRGGI K++ 
Sbjct: 21  PEATYEAVVADPRLFMTSLERLHSLLGTKFMVPIIGGRDLDLHKLFVEVTSRGGINKILN 80

Query: 105 ERRWKEVTSVFNFPSTATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMISGKYSPQCPS 164
           ERRWKEVT+ F FP TATNAS+VLRKYY SLL+++EQI+FF++ G  P      S Q PS
Sbjct: 81  ERRWKEVTATFVFPPTATNASYVLRKYYFSLLNNYEQIYFFRSNGQIP----PDSMQSPS 140

Query: 165 PAPIPTQGTPSMWPPSDNQA-AMSQQPRTSTTELPAVAPSSASAAGFPVIGVIDGKFDSG 224
             P   QG  ++ P  + QA   + QP+ +T E         S AG  V+GVIDGKF+SG
Sbjct: 141 ARPCFIQG--AIRPSQELQALTFTPQPKINTAEF-----LGGSLAGSNVVGVIDGKFESG 200

Query: 225 YLVTVTIGSEKLKGVLYQSPPEQPAQQQV-LQPDGVFAKDGATSMAPN------AHRRRR 284
           YLVTVTIGSE+LKGVLYQ  P+     Q   Q  GV       S  P         RRRR
Sbjct: 201 YLVTVTIGSEQLKGVLYQLLPQNTVSYQTPQQSHGVLPNTLNISANPQGVAGGVTKRRRR 260

Query: 285 RKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGELWNKLNESDRT 344
           RKKSEIKRRDP HPKPNRSGYNFFFAEQHARLKPL+PGKDR+ISRMIGELWNKLNE ++ 
Sbjct: 261 RKKSEIKRRDPDHPKPNRSGYNFFFAEQHARLKPLHPGKDRDISRMIGELWNKLNEDEKL 320

Query: 345 VYQEKAMKDKERYRIEMEDYREKLRTGQVISDAVPLQQRLPEPDLNMVYADKNEETEGGE 404
           +YQ KAM+DKERYR EMEDYREK + GQ+IS+AVPLQQRLPE +++M  AD   + E  E
Sbjct: 321 IYQGKAMEDKERYRTEMEDYREKKKNGQLISNAVPLQQRLPEQNVDMAEADLPID-EVEE 380

Query: 405 SPQTPDHDTSYVEGDSGEYKTEEKEEDEEEDSEEDASPQGVGNVDVNVLVEEEDGGETRA 464
             +  D   S  E +  + ++ E + + EE S   + P    N    V+  +E  G    
Sbjct: 381 DDEEGDSSGSSGESEPHDDQSIETDPELEEPSLNPSGPNLNPNPTEIVVAPKEKNG---- 440

Query: 465 AEEDVRKESSTVVVGDEKEV 477
              DV  E+S +   DE  V
Sbjct: 441 ---DVVMETSPLKKADEPTV 441

[Close]

BLAST of MS007810 vs. ExPASy Swiss-Prot
Match: Q9SGS2 (High mobility group B protein 9 OS=Arabidopsis thaliana OX=3702 GN=HMGB9 PE=1 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.5e-68
Identity = 152/322 (47.20%), Postives = 196/322 (60.87%), Query Frame = 0


Query: 42  YPPPQATYEDIIGNPKIFMTSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEK 101
           YP P A +E ++ +  +F  +L + HSIM TKFMIP+IGGKELDLH L+VEVT RGG EK
Sbjct: 27  YPEPLALHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYVEVTRRGGYEK 86

Query: 102 VIRERRWKEVTSVFNFPSTATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMISGKYSPQ 161
           V+ E++W+EV  VF F +T T+ASFVLRK+YL+LL H+EQ+H F A G            
Sbjct: 87  VVVEKKWREVGGVFRFSATTTSASFVLRKHYLNLLFHYEQVHLFTARG------------ 146

Query: 162 CPSPAPIPT-QGTPSMWPPSDNQAAMSQQPRTSTTELPAVAPSSASAAGFPVIGVIDGKF 221
            P   PI T    PS    S   A +   P   +       P S  ++ F  IG I+GKF
Sbjct: 147 -PLLHPIATFHANPS---TSKEMALVEYTP--PSIRYHNTHPPSQGSSSFTAIGTIEGKF 206

Query: 222 DSGYLVTVTIGSEKLKGVLYQSPPEQPAQQQVLQPDGVFAKDGATSMAPNAHRRRRRKKS 281
           D GYLV V +GSE L GVLY S    P+      P  V        +     RRR  K+ 
Sbjct: 207 DCGYLVKVKLGSEILNGVLYHSAQPGPSS----SPTAVLNNAVVPYVETGRRRRRLGKRR 266

Query: 282 EIKRR-DPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGELWNKLNESDRTVYQ 341
             +RR DP +PKPNRSGYNFFFAE+H +LK LYP K+RE +++IGE W+ L+  +R VYQ
Sbjct: 267 RSRRREDPNYPKPNRSGYNFFFAEKHCKLKSLYPNKEREFTKLIGESWSNLSTEERMVYQ 326

Query: 342 EKAMKDKERYRIEMEDYREKLR 362
           +  +KDKERY+ E+ +YRE LR
Sbjct: 327 DIGLKDKERYQRELNEYRETLR 326

[Close]

BLAST of MS007810 vs. ExPASy Swiss-Prot
Match: Q9LTT3 (High mobility group B protein 10 OS=Arabidopsis thaliana OX=3702 GN=HMGB10 PE=1 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.5e-60
Identity = 130/321 (40.50%), Postives = 184/321 (57.32%), Query Frame = 0


Query: 47  ATYEDIIGNPKIFMTSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRER 106
           A Y+D++ N  +F   L     +      +P +GG  LDLHRLF+EVTSRGGIE+V+++R
Sbjct: 34  AKYDDLVRNSALFWEKLRAFLGLTSKTLKVPTVGGNTLDLHRLFIEVTSRGGIERVVKDR 93

Query: 107 RWKEVTSVFNFPSTATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMISGKYSPQCPSPA 166
           +WKEV   F+FP+T T+ASFVLRKYYL  L   E +++ +    +   + +      + +
Sbjct: 94  KWKEVIGAFSFPTTITSASFVLRKYYLKFLFQLEHVYYLEKPVSSLQSTDEALKSLANES 153

Query: 167 PIPTQGTPSMWPPSDNQAAMSQQPRTSTTELPAVAPSSASAAGFPVIGVIDGKFDSGYLV 226
           P P +G                +P+                 G+ V G IDGKFDSGYLV
Sbjct: 154 PNPEEGI--------------DEPQ----------------VGYEVQGFIDGKFDSGYLV 213

Query: 227 TVTIGSEKLKGVLYQSPPEQPAQQQVLQPDGVFAKDGATSMAPNAHRRRRRKKSEIKRRD 286
           T+ +GS++LKGVLY  P      QQ ++           S    + +RR RKKS++   D
Sbjct: 214 TMKLGSQELKGVLYHIPQTPSQSQQTME---------TPSAIVQSSQRRHRKKSKLAVVD 273

Query: 287 PAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGELWNKLNESDRTVYQEKAMKDK 346
              PK +RSGYNFFFAEQ+ARLKP Y G++R I++ IG +W+ L ES++ VYQ+K +KD 
Sbjct: 274 TQKPKCHRSGYNFFFAEQYARLKPEYHGQERSITKKIGHMWSNLTESEKQVYQDKGVKDV 315

Query: 347 ERYRIEMEDYREKLRTGQVIS 368
           ERYRIEM +Y+    +G   S
Sbjct: 334 ERYRIEMLEYKSSHESGATAS 315

[Close]

BLAST of MS007810 vs. ExPASy Swiss-Prot
Match: Q9LG02 (Putative high mobility group B protein 11 OS=Arabidopsis thaliana OX=3702 GN=HMGB11 PE=1 SV=2)

HSP 1 Score: 192.6 bits (488), Expect = 1.1e-47
Identity = 118/315 (37.46%), Postives = 166/315 (52.70%), Query Frame = 0


Query: 49  YEDIIGNPKIFMTSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRW 108
           Y+DI+ NP++F   L   H     KF IPI+GGK LDLHRLF EVTSRGG+EKVI++RR 
Sbjct: 30  YQDIVRNPELFWEMLRDFHESSDKKFKIPIVGGKSLDLHRLFNEVTSRGGLEKVIKDRRC 89

Query: 109 KEVTSVFNFPSTATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMISGKYSPQCPSPAPI 168
           KEV   FNF +T TN++FVLRK YL +L  FE +++F+                   AP+
Sbjct: 90  KEVIDAFNFKTTITNSAFVLRKSYLKMLFEFEHLYYFQ-------------------APL 149

Query: 169 PTQGTPSMWPPSDNQAAMSQQPRTSTTELPAVAPSSASAAGFPVIGVIDGKFDSGYLVTV 228
            T      W        + ++      +   + P      G  + G+IDGKF+SGYL++ 
Sbjct: 150 ST-----FWEKEKALKLLIEKSANRDKDSQELKP------GTVITGIIDGKFESGYLIST 209

Query: 229 TIGSEKLKGVLYQSPPEQPAQQQVLQPDGVFAKDGATSMAPNAHRRRRRKKSEIKRRDP- 288
            +GSEKLKG+LY   PE                            +R +KK++  + D  
Sbjct: 210 KVGSEKLKGMLYHISPE---------------------------TKRGKKKAKSSQGDSH 269

Query: 289 AHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGELWNKLNESDRTVYQEKAMKDKE 348
             PK  R+GYNFF AEQ  R+K    G+     +  G +W  L+ESDR VY EK+ +D +
Sbjct: 270 KPPKRQRTGYNFFVAEQSVRIKAENAGQKVSSPKNFGNMWTNLSESDRKVYYEKSREDGK 287

Query: 349 RYRIEMEDYREKLRT 363
           RY++E+  YR  + +
Sbjct: 330 RYKMEILQYRSLMES 287

[Close]

BLAST of MS007810 vs. ExPASy Swiss-Prot
Match: Q68CP9 (AT-rich interactive domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ARID2 PE=1 SV=2)

HSP 1 Score: 87.0 bits (214), Expect = 6.4e-16
Identity = 39/88 (44.32%), Postives = 56/88 (63.64%), Query Frame = 0


Query: 59  FMTSLEKLHSIMGTKF-MIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNF 118
           F+  L + H   G+ F  IP +GGKELDLH L+  VT+ GG  KV  + +W E+   FNF
Sbjct: 19  FLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNF 78

Query: 119 PSTATNASFVLRKYYLSLLHHFEQIHFF 146
           P + +NA+F L++YYL  L  +E++H F
Sbjct: 79  PRSCSNAAFALKQYYLRYLEKYEKVHHF 106

[Close]

BLAST of MS007810 vs. ExPASy TrEMBL
Match: A0A6J1CAX2 (high mobility group B protein 15 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009817 PE=4 SV=1)

HSP 1 Score: 958.7 bits (2477), Expect = 9.3e-276
Identity = 498/504 (98.81%), Postives = 498/504 (98.81%), Query Frame = 0


Query: 1   MVEEERTEAGWGSRKELTMASTSFPGGKPLPVIETSSNCVLYPPPQATYEDIIGNPKIFM 60
           MVEEERTEAGWGSRKELTMASTSFPGGKPLPVIETSSNCVLYPPPQATYEDIIGNPKIFM
Sbjct: 1   MVEEERTEAGWGSRKELTMASTSFPGGKPLPVIETSSNCVLYPPPQATYEDIIGNPKIFM 60

Query: 61  TSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120
           TSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST
Sbjct: 61  TSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120

Query: 121 ATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMISGKYSPQCPSPAPIPTQGTPSMWPPS 180
           ATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMIS   SPQCPSPAPIPTQGTPSMWPPS
Sbjct: 121 ATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMISD--SPQCPSPAPIPTQGTPSMWPPS 180

Query: 181 DNQAAMSQQPRTSTTELPAVAPSSASAAGFPVIGVIDGKFDSGYLVTVTIGSEKLKGVLY 240
           DNQAAMSQQPRTSTTELPAVAPSSASAAGFPVIGVIDGKFDSGYLVTVTIGSEKLKGVLY
Sbjct: 181 DNQAAMSQQPRTSTTELPAVAPSSASAAGFPVIGVIDGKFDSGYLVTVTIGSEKLKGVLY 240

Query: 241 QSPPEQPAQQQVLQPDGVFAKDGATSMAPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFF 300
           QSPPEQPAQQQVLQPDGVFAKDGATSMAPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFF
Sbjct: 241 QSPPEQPAQQQVLQPDGVFAKDGATSMAPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFF 300

Query: 301 FAEQHARLKPLYPGKDREISRMIGELWNKLNESDRTVYQEKAMKDKERYRIEMEDYREKL 360
           FAEQHARLKPLYPGKDREISRMIGELWNKLNESDRTVYQEKAMKDKERYRIEMEDYREKL
Sbjct: 301 FAEQHARLKPLYPGKDREISRMIGELWNKLNESDRTVYQEKAMKDKERYRIEMEDYREKL 360

Query: 361 RTGQVISDAVPLQQRLPEPDLNMVYADKNEETEGGESPQTPDHDTSYVEGDSGEYKTEEK 420
           RTGQVISDAVPLQQRLPEPDLNMVYADKNEETEGGESPQTPDHDTSYVEGDSGEYKTEEK
Sbjct: 361 RTGQVISDAVPLQQRLPEPDLNMVYADKNEETEGGESPQTPDHDTSYVEGDSGEYKTEEK 420

Query: 421 EEDEEEDSEEDASPQGVGNVDVNVLVEEEDGGETRAAEEDVRKESSTVVVGDEKEVFTRD 480
           EEDEEEDSEEDASPQ VGNVDVNVLVEEE GGETRAAEEDVRKESSTVVVGDEKEVFTRD
Sbjct: 421 EEDEEEDSEEDASPQRVGNVDVNVLVEEEGGGETRAAEEDVRKESSTVVVGDEKEVFTRD 480

Query: 481 SLMEEAKEEPE-PPPPPTTAIRED 504
           SLMEEAKEEPE PPPPPTTAIRED
Sbjct: 481 SLMEEAKEEPEPPPPPPTTAIRED 502

[Close]

BLAST of MS007810 vs. ExPASy TrEMBL
Match: A0A6J1CAI2 (high mobility group B protein 15 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009817 PE=4 SV=1)

HSP 1 Score: 951.8 bits (2459), Expect = 1.1e-273
Identity = 498/511 (97.46%), Postives = 498/511 (97.46%), Query Frame = 0


Query: 1   MVEEERTEAGWGSRKELTMASTSFPGGKPLPVIETSSNCVLYPPPQATYEDIIGNPKIFM 60
           MVEEERTEAGWGSRKELTMASTSFPGGKPLPVIETSSNCVLYPPPQATYEDIIGNPKIFM
Sbjct: 1   MVEEERTEAGWGSRKELTMASTSFPGGKPLPVIETSSNCVLYPPPQATYEDIIGNPKIFM 60

Query: 61  TSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120
           TSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST
Sbjct: 61  TSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120

Query: 121 ATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMISGKYSPQCPSPAPIPTQGTPSMWPPS 180
           ATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMIS   SPQCPSPAPIPTQGTPSMWPPS
Sbjct: 121 ATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMISD--SPQCPSPAPIPTQGTPSMWPPS 180

Query: 181 DNQAAMSQQPRTSTTELPA-------VAPSSASAAGFPVIGVIDGKFDSGYLVTVTIGSE 240
           DNQAAMSQQPRTSTTELPA       VAPSSASAAGFPVIGVIDGKFDSGYLVTVTIGSE
Sbjct: 181 DNQAAMSQQPRTSTTELPADSTFLPTVAPSSASAAGFPVIGVIDGKFDSGYLVTVTIGSE 240

Query: 241 KLKGVLYQSPPEQPAQQQVLQPDGVFAKDGATSMAPNAHRRRRRKKSEIKRRDPAHPKPN 300
           KLKGVLYQSPPEQPAQQQVLQPDGVFAKDGATSMAPNAHRRRRRKKSEIKRRDPAHPKPN
Sbjct: 241 KLKGVLYQSPPEQPAQQQVLQPDGVFAKDGATSMAPNAHRRRRRKKSEIKRRDPAHPKPN 300

Query: 301 RSGYNFFFAEQHARLKPLYPGKDREISRMIGELWNKLNESDRTVYQEKAMKDKERYRIEM 360
           RSGYNFFFAEQHARLKPLYPGKDREISRMIGELWNKLNESDRTVYQEKAMKDKERYRIEM
Sbjct: 301 RSGYNFFFAEQHARLKPLYPGKDREISRMIGELWNKLNESDRTVYQEKAMKDKERYRIEM 360

Query: 361 EDYREKLRTGQVISDAVPLQQRLPEPDLNMVYADKNEETEGGESPQTPDHDTSYVEGDSG 420
           EDYREKLRTGQVISDAVPLQQRLPEPDLNMVYADKNEETEGGESPQTPDHDTSYVEGDSG
Sbjct: 361 EDYREKLRTGQVISDAVPLQQRLPEPDLNMVYADKNEETEGGESPQTPDHDTSYVEGDSG 420

Query: 421 EYKTEEKEEDEEEDSEEDASPQGVGNVDVNVLVEEEDGGETRAAEEDVRKESSTVVVGDE 480
           EYKTEEKEEDEEEDSEEDASPQ VGNVDVNVLVEEE GGETRAAEEDVRKESSTVVVGDE
Sbjct: 421 EYKTEEKEEDEEEDSEEDASPQRVGNVDVNVLVEEEGGGETRAAEEDVRKESSTVVVGDE 480

Query: 481 KEVFTRDSLMEEAKEEPE-PPPPPTTAIRED 504
           KEVFTRDSLMEEAKEEPE PPPPPTTAIRED
Sbjct: 481 KEVFTRDSLMEEAKEEPEPPPPPPTTAIRED 509

[Close]

BLAST of MS007810 vs. ExPASy TrEMBL
Match: A0A0A0LL59 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G138760 PE=4 SV=1)

HSP 1 Score: 772.3 bits (1993), Expect = 1.2e-219
Identity = 421/516 (81.59%), Postives = 447/516 (86.63%), Query Frame = 0


Query: 1   MVEEERTEAGWGSRKELTMASTSFPGGKPLPVIETSSNCVLYPPPQATYEDIIGNPKIFM 60
           M+EEERTEAGWGSRKELTMASTSF GGK LPVIE +SNCV YPPPQ TYEDII N KIFM
Sbjct: 1   MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFM 60

Query: 61  TSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120
           T+LEKLHS+MGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST
Sbjct: 61  TALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120

Query: 121 ATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMISGKYSPQCPSPAPIPTQGTPSMWPPS 180
           ATNASFVLRKYY+SLLHHFEQI+FFKAVGWTP+ S   S  CPS + IPTQG  SM PPS
Sbjct: 121 ATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSD--SSPCPSASAIPTQGVTSMLPPS 180

Query: 181 DNQAAMSQQPRTSTTELPAVAPSSAS-AAGFPVIGVIDGKFDSGYLVTVTIGSEKLKGVL 240
           DNQAA S QP+++ TELPAV+PSS S   GFPVIGVIDGKFDSGYLVTVT+G+EKLKGVL
Sbjct: 181 DNQAA-SHQPQSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVL 240

Query: 241 YQSPPEQPAQQQVLQPDGVFAKDGATSMAPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNF 300
           YQ+ PEQP+Q QVLQP G FAKDG+T   PNAHRRRRRKKSEIKRRDPAHPKPNRSGYNF
Sbjct: 241 YQA-PEQPSQPQVLQPVGAFAKDGSTPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNF 300

Query: 301 FFAEQHARLKPLYPGKDREISRMIGELWNKLNESDRTVYQEKAMKDKERYRIEMEDYREK 360
           FFAEQHARLKPLYPGKDREISRMIG+LWNKL ES+RTVYQEKAMKDKERYRIEM DYREK
Sbjct: 301 FFAEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREK 360

Query: 361 LRTGQVISDAVPLQQRLPEPDLNMVYADKNEETEGGESPQTPDHDTSYVEGDSGEYKTEE 420
           LRTGQ+ISDAVPLQQRLPEPDLNMVY DKNEETEGGES QTPDHDTSYVEGDSGEYKTEE
Sbjct: 361 LRTGQIISDAVPLQQRLPEPDLNMVYGDKNEETEGGES-QTPDHDTSYVEGDSGEYKTEE 420

Query: 421 K-------EEDEEEDSEEDASPQGVGNVDVNVLVEEEDGGETRAAEEDVRKESSTVVVGD 480
           K       EEDEE+DSEEDASPQG+GNVDVN+LVEEE         E+VRKESST  VGD
Sbjct: 421 KEEDEEDDEEDEEDDSEEDASPQGIGNVDVNILVEEEQCETRTTGVENVRKESST--VGD 480

Query: 481 EKEVFTRDSLM--EEAKEEPEP---PPPPTTAIRED 504
           +KEV   DS+M   EAKE PEP    P    AIRED
Sbjct: 481 KKEVLAGDSVMVEVEAKEVPEPTTAEPTTAAAIRED 509

[Close]

BLAST of MS007810 vs. ExPASy TrEMBL
Match: A0A5A7SQV2 (High mobility group B protein 15 isoform X5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold275G001100 PE=4 SV=1)

HSP 1 Score: 741.1 bits (1912), Expect = 3.0e-210
Identity = 408/496 (82.26%), Postives = 432/496 (87.10%), Query Frame = 0


Query: 19  MASTSFPGGKPLPVIETSSNCVLYPPPQATYEDIIGNPKIFMTSLEKLHSIMGTKFMIPI 78
           MASTSF GGK LPVIE +SNCV YPPPQ TYEDII N KIFMT+LEKLHS+MGTKFMIPI
Sbjct: 1   MASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFMTALEKLHSLMGTKFMIPI 60

Query: 79  IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYLSLLHH 138
           IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYY+SLLHH
Sbjct: 61  IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYISLLHH 120

Query: 139 FEQIHFFKAVGWTPMISGKYSPQCPSPAPIPTQGTPSMWPPSDNQAAMSQQPRTSTTELP 198
           FEQI+FFKAVGWTP+ S   S  CPS + IPTQG  SM PPSDNQAA S QPR+  TELP
Sbjct: 121 FEQIYFFKAVGWTPVTSD--SSPCPSASAIPTQGVTSMLPPSDNQAA-SHQPRSIATELP 180

Query: 199 AVAPSSAS-AAGFPVIGVIDGKFDSGYLVTVTIGSEKLKGVLYQSPPEQPAQQQVLQPDG 258
           AV+ SS S A GFPVIGVIDGKFDSGYLVTVT+G+EKLKGVLYQ+ PEQP+Q QVLQP G
Sbjct: 181 AVSLSSTSPAGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQA-PEQPSQPQVLQPVG 240

Query: 259 VFAKDGATSMAPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDR 318
            FAKDG+T   PNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDR
Sbjct: 241 AFAKDGSTPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDR 300

Query: 319 EISRMIGELWNKLNESDRTVYQEKAMKDKERYRIEMEDYREKLRTGQVISDAVPLQQRLP 378
           EISRMIG+LWNKL ES+RTVYQEKAMKDKERYRIEM DYREKLRTGQ+ISDAVPLQQRLP
Sbjct: 301 EISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTGQIISDAVPLQQRLP 360

Query: 379 EPDLNMVYADKNEETEGGESPQTPDHDTSYVEGDSGEYKTEEKEED--------EEEDSE 438
           EPDLNMVY DKNEETEGGES QTPDHDTSYVEGDSGEYKTEEK+ED        EE+DSE
Sbjct: 361 EPDLNMVYGDKNEETEGGES-QTPDHDTSYVEGDSGEYKTEEKDEDEEDDEEDEEEDDSE 420

Query: 439 EDASPQGVGNVDVNVLVEEEDGGETRAAEEDVRKESSTVVVGDEKEVFTRDSLM--EEAK 498
           EDASPQG+GNVDVN+LVEEE   ETR   E+VRKESST  VGD+KEV   DS+M   EAK
Sbjct: 421 EDASPQGIGNVDVNILVEEEQ-CETRTGVENVRKESST--VGDKKEVLAGDSVMVEVEAK 480

Query: 499 EEPEPPPPPTTAIRED 504
           EEPE   P T AIRED
Sbjct: 481 EEPE---PTTAAIRED 485

[Close]

BLAST of MS007810 vs. ExPASy TrEMBL
Match: A0A6J1KXI8 (high mobility group B protein 15-like OS=Cucurbita maxima OX=3661 GN=LOC111499106 PE=4 SV=1)

HSP 1 Score: 713.4 bits (1840), Expect = 6.8e-202
Identity = 394/491 (80.24%), Postives = 422/491 (85.95%), Query Frame = 0


Query: 19  MASTSFPGGKPLPVIETSSNCVLYPPPQATYEDIIGNPKIFMTSLEKLHSIMGTKFMIPI 78
           MASTSF G K LPVIE +S+C+ YPPPQ TYEDI+ NP IFM SLEKLHS+MGTKFMIPI
Sbjct: 1   MASTSFAGRKQLPVIEATSSCIPYPPPQTTYEDIVANPNIFMASLEKLHSVMGTKFMIPI 60

Query: 79  IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYLSLLHH 138
           IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYLSLLHH
Sbjct: 61  IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYLSLLHH 120

Query: 139 FEQIHFFKAVGWTPMISGKYSPQCPSPAPIPTQGTPSMWPPSDNQAAMSQQPRTSTTELP 198
           FEQI+FFKAVGWTP+IS   S  CPS A IPTQGT SM PPSDNQAA SQ PR++ TELP
Sbjct: 121 FEQIYFFKAVGWTPIISD--SSLCPSAATIPTQGTASMLPPSDNQAA-SQPPRSTATELP 180

Query: 199 AVAPSSAS-AAGFPVIGVIDGKFDSGYLVTVTIGSEKLKGVLYQSPPEQPAQQQVLQPDG 258
           AVAP S S A GFPVIGVIDGKFDSGYL+TVT+G+EKLKGVLYQ+  EQP      QP G
Sbjct: 181 AVAPGSTSPAGGFPVIGVIDGKFDSGYLITVTVGTEKLKGVLYQASSEQPT-----QPVG 240

Query: 259 VFAKDGATSMAPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDR 318
           VFAKDG     PNAH+ RRRKK EIKRRDP HPKPNRSGYNFFFAEQHARLKPL+PGKDR
Sbjct: 241 VFAKDG----TPNAHQHRRRKKYEIKRRDPGHPKPNRSGYNFFFAEQHARLKPLHPGKDR 300

Query: 319 EISRMIGELWNKLNESDRTVYQEKAMKDKERYRIEMEDYREKLRTGQVISDAVPLQQRLP 378
           EISRMIG+LWNKL ES+R VYQEKAMKDKERYR+EMEDYREKLRTGQVISDAVPLQQRLP
Sbjct: 301 EISRMIGDLWNKLKESERIVYQEKAMKDKERYRVEMEDYREKLRTGQVISDAVPLQQRLP 360

Query: 379 EPDLNMVYADKNEETEGGESPQTPDHDTSYVEGDSGEYKTEEKEED---EEEDSEEDASP 438
           EPDLNMVYADKNEETE GESPQTPD+DTSYVEG+SGEYK E KEED   EEEDSEEDASP
Sbjct: 361 EPDLNMVYADKNEETEDGESPQTPDNDTSYVEGNSGEYKMEVKEEDEEEEEEDSEEDASP 420

Query: 439 QGVGNVDVNVLVEEEDGGETRAAEEDVRKESSTVVVGDEKEVFTRDSLMEE--AKEEPEP 498
           +G+G VDVN LVEEE   +T  AEEDVRKESST  VGD+KEV+  +S+M E  AKEEPE 
Sbjct: 421 KGIGIVDVNALVEEEQ-CKTGTAEEDVRKESST--VGDDKEVYAGESVMMEVDAKEEPE- 472

Query: 499 PPPPTTAIRED 504
              PTT IRE+
Sbjct: 481 ---PTTDIREN 472

[Close]

BLAST of MS007810 vs. TAIR 10
Match: AT1G04880.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain )

HSP 1 Score: 392.1 bits (1006), Expect = 6.7e-109
Identity = 239/440 (54.32%), Postives = 297/440 (67.50%), Query Frame = 0


Query: 45  PQATYEDIIGNPKIFMTSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIR 104
           P+ATYE ++ +P++FMTSLE+LHS++GTKFM+PIIGG++LDLH+LFVEVTSRGGI K++ 
Sbjct: 21  PEATYEAVVADPRLFMTSLERLHSLLGTKFMVPIIGGRDLDLHKLFVEVTSRGGINKILN 80

Query: 105 ERRWKEVTSVFNFPSTATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMISGKYSPQCPS 164
           ERRWKEVT+ F FP TATNAS+VLRKYY SLL+++EQI+FF++ G  P      S Q PS
Sbjct: 81  ERRWKEVTATFVFPPTATNASYVLRKYYFSLLNNYEQIYFFRSNGQIP----PDSMQSPS 140

Query: 165 PAPIPTQGTPSMWPPSDNQA-AMSQQPRTSTTELPAVAPSSASAAGFPVIGVIDGKFDSG 224
             P   QG  ++ P  + QA   + QP+ +T E         S AG  V+GVIDGKF+SG
Sbjct: 141 ARPCFIQG--AIRPSQELQALTFTPQPKINTAEF-----LGGSLAGSNVVGVIDGKFESG 200

Query: 225 YLVTVTIGSEKLKGVLYQSPPEQPAQQQV-LQPDGVFAKDGATSMAPN------AHRRRR 284
           YLVTVTIGSE+LKGVLYQ  P+     Q   Q  GV       S  P         RRRR
Sbjct: 201 YLVTVTIGSEQLKGVLYQLLPQNTVSYQTPQQSHGVLPNTLNISANPQGVAGGVTKRRRR 260

Query: 285 RKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGELWNKLNESDRT 344
           RKKSEIKRRDP HPKPNRSGYNFFFAEQHARLKPL+PGKDR+ISRMIGELWNKLNE ++ 
Sbjct: 261 RKKSEIKRRDPDHPKPNRSGYNFFFAEQHARLKPLHPGKDRDISRMIGELWNKLNEDEKL 320

Query: 345 VYQEKAMKDKERYRIEMEDYREKLRTGQVISDAVPLQQRLPEPDLNMVYADKNEETEGGE 404
           +YQ KAM+DKERYR EMEDYREK + GQ+IS+AVPLQQRLPE +++M  AD   + E  E
Sbjct: 321 IYQGKAMEDKERYRTEMEDYREKKKNGQLISNAVPLQQRLPEQNVDMAEADLPID-EVEE 380

Query: 405 SPQTPDHDTSYVEGDSGEYKTEEKEEDEEEDSEEDASPQGVGNVDVNVLVEEEDGGETRA 464
             +  D   S  E +  + ++ E + + EE S   + P    N    V+  +E  G    
Sbjct: 381 DDEEGDSSGSSGESEPHDDQSIETDPELEEPSLNPSGPNLNPNPTEIVVAPKEKNG---- 440

Query: 465 AEEDVRKESSTVVVGDEKEV 477
              DV  E+S +   DE  V
Sbjct: 441 ---DVVMETSPLKKADEPTV 441

[Close]

BLAST of MS007810 vs. TAIR 10
Match: AT1G76110.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain )

HSP 1 Score: 261.9 bits (668), Expect = 1.0e-69
Identity = 152/322 (47.20%), Postives = 196/322 (60.87%), Query Frame = 0


Query: 42  YPPPQATYEDIIGNPKIFMTSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEK 101
           YP P A +E ++ +  +F  +L + HSIM TKFMIP+IGGKELDLH L+VEVT RGG EK
Sbjct: 27  YPEPLALHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYVEVTRRGGYEK 86

Query: 102 VIRERRWKEVTSVFNFPSTATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMISGKYSPQ 161
           V+ E++W+EV  VF F +T T+ASFVLRK+YL+LL H+EQ+H F A G            
Sbjct: 87  VVVEKKWREVGGVFRFSATTTSASFVLRKHYLNLLFHYEQVHLFTARG------------ 146

Query: 162 CPSPAPIPT-QGTPSMWPPSDNQAAMSQQPRTSTTELPAVAPSSASAAGFPVIGVIDGKF 221
            P   PI T    PS    S   A +   P   +       P S  ++ F  IG I+GKF
Sbjct: 147 -PLLHPIATFHANPS---TSKEMALVEYTP--PSIRYHNTHPPSQGSSSFTAIGTIEGKF 206

Query: 222 DSGYLVTVTIGSEKLKGVLYQSPPEQPAQQQVLQPDGVFAKDGATSMAPNAHRRRRRKKS 281
           D GYLV V +GSE L GVLY S    P+      P  V        +     RRR  K+ 
Sbjct: 207 DCGYLVKVKLGSEILNGVLYHSAQPGPSS----SPTAVLNNAVVPYVETGRRRRRLGKRR 266

Query: 282 EIKRR-DPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGELWNKLNESDRTVYQ 341
             +RR DP +PKPNRSGYNFFFAE+H +LK LYP K+RE +++IGE W+ L+  +R VYQ
Sbjct: 267 RSRRREDPNYPKPNRSGYNFFFAEKHCKLKSLYPNKEREFTKLIGESWSNLSTEERMVYQ 326

Query: 342 EKAMKDKERYRIEMEDYREKLR 362
           +  +KDKERY+ E+ +YRE LR
Sbjct: 327 DIGLKDKERYQRELNEYRETLR 326

[Close]

BLAST of MS007810 vs. TAIR 10
Match: AT3G13350.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain )

HSP 1 Score: 234.6 bits (597), Expect = 1.8e-61
Identity = 130/321 (40.50%), Postives = 184/321 (57.32%), Query Frame = 0


Query: 47  ATYEDIIGNPKIFMTSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRER 106
           A Y+D++ N  +F   L     +      +P +GG  LDLHRLF+EVTSRGGIE+V+++R
Sbjct: 34  AKYDDLVRNSALFWEKLRAFLGLTSKTLKVPTVGGNTLDLHRLFIEVTSRGGIERVVKDR 93

Query: 107 RWKEVTSVFNFPSTATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMISGKYSPQCPSPA 166
           +WKEV   F+FP+T T+ASFVLRKYYL  L   E +++ +    +   + +      + +
Sbjct: 94  KWKEVIGAFSFPTTITSASFVLRKYYLKFLFQLEHVYYLEKPVSSLQSTDEALKSLANES 153

Query: 167 PIPTQGTPSMWPPSDNQAAMSQQPRTSTTELPAVAPSSASAAGFPVIGVIDGKFDSGYLV 226
           P P +G                +P+                 G+ V G IDGKFDSGYLV
Sbjct: 154 PNPEEGI--------------DEPQ----------------VGYEVQGFIDGKFDSGYLV 213

Query: 227 TVTIGSEKLKGVLYQSPPEQPAQQQVLQPDGVFAKDGATSMAPNAHRRRRRKKSEIKRRD 286
           T+ +GS++LKGVLY  P      QQ ++           S    + +RR RKKS++   D
Sbjct: 214 TMKLGSQELKGVLYHIPQTPSQSQQTME---------TPSAIVQSSQRRHRKKSKLAVVD 273

Query: 287 PAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGELWNKLNESDRTVYQEKAMKDK 346
              PK +RSGYNFFFAEQ+ARLKP Y G++R I++ IG +W+ L ES++ VYQ+K +KD 
Sbjct: 274 TQKPKCHRSGYNFFFAEQYARLKPEYHGQERSITKKIGHMWSNLTESEKQVYQDKGVKDV 315

Query: 347 ERYRIEMEDYREKLRTGQVIS 368
           ERYRIEM +Y+    +G   S
Sbjct: 334 ERYRIEMLEYKSSHESGATAS 315

[Close]

BLAST of MS007810 vs. TAIR 10
Match: AT1G55650.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain )

HSP 1 Score: 192.6 bits (488), Expect = 7.7e-49
Identity = 118/315 (37.46%), Postives = 166/315 (52.70%), Query Frame = 0


Query: 49  YEDIIGNPKIFMTSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRW 108
           Y+DI+ NP++F   L   H     KF IPI+GGK LDLHRLF EVTSRGG+EKVI++RR 
Sbjct: 30  YQDIVRNPELFWEMLRDFHESSDKKFKIPIVGGKSLDLHRLFNEVTSRGGLEKVIKDRRC 89

Query: 109 KEVTSVFNFPSTATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMISGKYSPQCPSPAPI 168
           KEV   FNF +T TN++FVLRK YL +L  FE +++F+                   AP+
Sbjct: 90  KEVIDAFNFKTTITNSAFVLRKSYLKMLFEFEHLYYFQ-------------------APL 149

Query: 169 PTQGTPSMWPPSDNQAAMSQQPRTSTTELPAVAPSSASAAGFPVIGVIDGKFDSGYLVTV 228
            T      W        + ++      +   + P      G  + G+IDGKF+SGYL++ 
Sbjct: 150 ST-----FWEKEKALKLLIEKSANRDKDSQELKP------GTVITGIIDGKFESGYLIST 209

Query: 229 TIGSEKLKGVLYQSPPEQPAQQQVLQPDGVFAKDGATSMAPNAHRRRRRKKSEIKRRDP- 288
            +GSEKLKG+LY   PE                            +R +KK++  + D  
Sbjct: 210 KVGSEKLKGMLYHISPE---------------------------TKRGKKKAKSSQGDSH 269

Query: 289 AHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGELWNKLNESDRTVYQEKAMKDKE 348
             PK  R+GYNFF AEQ  R+K    G+     +  G +W  L+ESDR VY EK+ +D +
Sbjct: 270 KPPKRQRTGYNFFVAEQSVRIKAENAGQKVSSPKNFGNMWTNLSESDRKVYYEKSREDGK 287

Query: 349 RYRIEMEDYREKLRT 363
           RY++E+  YR  + +
Sbjct: 330 RYKMEILQYRSLMES 287

[Close]

BLAST of MS007810 vs. TAIR 10
Match: AT3G28730.1 (high mobility group )

HSP 1 Score: 55.8 bits (133), Expect = 1.1e-07
Identity = 27/82 (32.93%), Postives = 49/82 (59.76%), Query Frame = 0


Query: 277 RKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPG-KDREISRMIGELWNKLNESDR 336
           ++K   K++DP  PK   SG+ FF   +   +K  +PG    E+ +++G+ W +++  D+
Sbjct: 549 KRKKPKKKKDPNAPKRAMSGFMFFSQMERDNIKKEHPGIAFGEVGKVLGDKWRQMSADDK 608

Query: 337 TVYQEKAMKDKERYRIEMEDYR 358
             Y+ KA  DK+RY+ E+ DY+
Sbjct: 609 EPYEAKAQVDKQRYKDEISDYK 630

The following BLAST results are available for this feature:

BLAST of MS007810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138724.1	1.9e-275	98.81	high mobility group B protein 15 isoform X2 [Momordica charantia]	[more]
XP_022138716.1	2.3e-273	97.46	high mobility group B protein 15 isoform X1 [Momordica charantia] >XP_022138718....	[more]
XP_038876011.1	9.3e-222	82.78	LOW QUALITY PROTEIN: high mobility group B protein 15-like [Benincasa hispida]	[more]
XP_011649091.1	2.5e-219	81.59	high mobility group B protein 15 isoform X2 [Cucumis sativus]	[more]
XP_004139006.2	2.5e-219	81.59	high mobility group B protein 15 isoform X5 [Cucumis sativus] >XP_011649099.1 hi...	[more]

BLAST of MS007810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MAT6	9.4e-108	54.32	High mobility group B protein 15 OS=Arabidopsis thaliana OX=3702 GN=HMGB15 PE=2 ...	[more]
Q9SGS2	1.5e-68	47.20	High mobility group B protein 9 OS=Arabidopsis thaliana OX=3702 GN=HMGB9 PE=1 SV...	[more]
Q9LTT3	2.5e-60	40.50	High mobility group B protein 10 OS=Arabidopsis thaliana OX=3702 GN=HMGB10 PE=1 ...	[more]
Q9LG02	1.1e-47	37.46	Putative high mobility group B protein 11 OS=Arabidopsis thaliana OX=3702 GN=HMG...	[more]
Q68CP9	6.4e-16	44.32	AT-rich interactive domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ARID2...	[more]

BLAST of MS007810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CAX2	9.3e-276	98.81	high mobility group B protein 15 isoform X2 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1CAI2	1.1e-273	97.46	high mobility group B protein 15 isoform X1 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A0A0LL59	1.2e-219	81.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G138760 PE=4 SV=1	[more]
A0A5A7SQV2	3.0e-210	82.26	High mobility group B protein 15 isoform X5 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1KXI8	6.8e-202	80.24	high mobility group B protein 15-like OS=Cucurbita maxima OX=3661 GN=LOC11149910...	[more]

BLAST of MS007810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04880.1	6.7e-109	54.32	HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain	[more]
AT1G76110.1	1.0e-69	47.20	HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain	[more]
AT3G13350.1	1.8e-61	40.50	HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain	[more]
AT1G55650.1	7.7e-49	37.46	HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain	[more]
AT3G28730.1	1.1e-07	32.93	high mobility group	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 339..359
None	No IPR available	SMART	SM01014	ARID_2	coord: 50..140 e-value: 6.9E-30 score: 115.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 416..432
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..197
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 270..284
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 448..491
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 390..503
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..197
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 261..297
None	No IPR available	PANTHER	PTHR46691	HIGH MOBILITY GROUP B PROTEIN 9	coord: 7..429
None	No IPR available	PANTHER	PTHR46691:SF3	HIGH MOBILITY GROUP B PROTEIN 15	coord: 7..429
None	No IPR available	CDD	cd01390	HMGB-UBF_HMG-box	coord: 290..354 e-value: 1.97619E-20 score: 83.0609
None	No IPR available	CDD	cd16872	ARID_HMGB9-like	coord: 55..140 e-value: 5.35263E-51 score: 166.671
IPR001606	ARID DNA-binding domain	SMART	SM00501	bright_3	coord: 54..145 e-value: 1.8E-30 score: 117.3
IPR001606	ARID DNA-binding domain	PFAM	PF01388	ARID	coord: 58..140 e-value: 2.0E-17 score: 63.6
IPR001606	ARID DNA-binding domain	PROSITE	PS51011	ARID	coord: 53..144 score: 26.086555
IPR009071	High mobility group box domain	SMART	SM00398	hmgende2	coord: 289..358 e-value: 1.0E-18 score: 78.2
IPR009071	High mobility group box domain	PFAM	PF00505	HMG_box	coord: 290..357 e-value: 5.6E-14 score: 52.3
IPR009071	High mobility group box domain	PROSITE	PS50118	HMG_BOX_2	coord: 290..357 score: 15.325739
IPR036431	ARID DNA-binding domain superfamily	GENE3D	1.10.150.60		coord: 49..147 e-value: 4.4E-27 score: 96.1
IPR036431	ARID DNA-binding domain superfamily	SUPERFAMILY	46774	ARID-like	coord: 54..154
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 274..369 e-value: 1.3E-20 score: 75.5
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 283..362

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS007810.1	MS007810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding