MS007786 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTGAACATAACAAATGTTTTGGAAAGTCATCAGCAGCTCACCGTTCACTGCAAATCCAAGAACGACGATCTCGGATTCCATCAGCTGCCTTCTCTGATCAGCTACGCCTTCGATTTCCAACCGAACATCTTGAGTTCGATACTGTTCTTCTGCAGCTTCCAGTGGCCTGGCTCCTTTCACTACTTTGAGATCTACAACCAAAAGAGAGACCAAGATGTTTGCAACTTTTGTTTGTGGATTGTGGGCGAAAAGGGTCTCTGTTTGCACAACAGCAGAACCCTCAAGTACGATATTTGCTATACATGGCCATCC GTGAACATAACAAATGTTTTGGAAAGTCATCAGCAGCTCACCGTTCACTGCAAATCCAAGAACGACGATCTCGGATTCCATCAGCTGCCTTCTCTGATCAGCTACGCCTTCGATTTCCAACCGAACATCTTGAGTTCGATACTGTTCTTCTGCAGCTTCCAGTGGCCTGGCTCCTTTCACTACTTTGAGATCTACAACCAAAAGAGAGACCAAGATGTTTGCAACTTTTGTTTGTGGATTGTGGGCGAAAAGGGTCTCTGTTTGCACAACAGCAGAACCCTCAAGTACGATATTTGCTATACATGGCCATCC GTGAACATAACAAATGTTTTGGAAAGTCATCAGCAGCTCACCGTTCACTGCAAATCCAAGAACGACGATCTCGGATTCCATCAGCTGCCTTCTCTGATCAGCTACGCCTTCGATTTCCAACCGAACATCTTGAGTTCGATACTGTTCTTCTGCAGCTTCCAGTGGCCTGGCTCCTTTCACTACTTTGAGATCTACAACCAAAAGAGAGACCAAGATGTTTGCAACTTTTGTTTGTGGATTGTGGGCGAAAAGGGTCTCTGTTTGCACAACAGCAGAACCCTCAAGTACGATATTTGCTATACATGGCCATCC VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDVCNFCLWIVGEKGLCLHNSRTLKYDICYTWPS Homology
BLAST of MS007786 vs. NCBI nr
Match: XP_022138779.1 (S-protein homolog 5 [Momordica charantia]) HSP 1 Score: 209.5 bits (532), Expect = 1.4e-50 Identity = 90/104 (86.54%), Postives = 98/104 (94.23%), Query Frame = 0
BLAST of MS007786 vs. NCBI nr
Match: XP_008465559.1 (PREDICTED: pumilio homolog 15-like, partial [Cucumis melo]) HSP 1 Score: 141.0 bits (354), Expect = 5.9e-30 Identity = 62/103 (60.19%), Postives = 74/103 (71.84%), Query Frame = 0
BLAST of MS007786 vs. NCBI nr
Match: KGN61530.1 (hypothetical protein Csa_006387 [Cucumis sativus]) HSP 1 Score: 139.0 bits (349), Expect = 2.3e-29 Identity = 63/105 (60.00%), Postives = 76/105 (72.38%), Query Frame = 0
BLAST of MS007786 vs. NCBI nr
Match: XP_008460739.1 (PREDICTED: uncharacterized protein LOC103499501 [Cucumis melo]) HSP 1 Score: 134.0 bits (336), Expect = 7.2e-28 Identity = 59/106 (55.66%), Postives = 70/106 (66.04%), Query Frame = 0
BLAST of MS007786 vs. NCBI nr
Match: CAB4292513.1 (unnamed protein product [Prunus armeniaca]) HSP 1 Score: 131.3 bits (329), Expect = 4.7e-27 Identity = 57/102 (55.88%), Postives = 71/102 (69.61%), Query Frame = 0
BLAST of MS007786 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 4.4e-20 Identity = 47/102 (46.08%), Postives = 60/102 (58.82%), Query Frame = 0
BLAST of MS007786 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 1.7e-16 Identity = 42/107 (39.25%), Postives = 53/107 (49.53%), Query Frame = 0
BLAST of MS007786 vs. ExPASy Swiss-Prot
Match: F4JZG1 (S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 1.7e-16 Identity = 43/107 (40.19%), Postives = 60/107 (56.07%), Query Frame = 0
BLAST of MS007786 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.5e-15 Identity = 40/106 (37.74%), Postives = 58/106 (54.72%), Query Frame = 0
BLAST of MS007786 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 4.3e-15 Identity = 35/102 (34.31%), Postives = 53/102 (51.96%), Query Frame = 0
BLAST of MS007786 vs. ExPASy TrEMBL
Match: A0A6J1CB24 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111009858 PE=3 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 6.6e-51 Identity = 90/104 (86.54%), Postives = 98/104 (94.23%), Query Frame = 0
BLAST of MS007786 vs. ExPASy TrEMBL
Match: A0A1S3CP53 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103503190 PE=3 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 2.9e-30 Identity = 62/103 (60.19%), Postives = 74/103 (71.84%), Query Frame = 0
BLAST of MS007786 vs. ExPASy TrEMBL
Match: A0A0A0LI28 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_2G162130 PE=3 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 1.1e-29 Identity = 63/105 (60.00%), Postives = 76/105 (72.38%), Query Frame = 0
BLAST of MS007786 vs. ExPASy TrEMBL
Match: A0A1S3CDK4 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103499501 PE=3 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 3.5e-28 Identity = 59/106 (55.66%), Postives = 70/106 (66.04%), Query Frame = 0
BLAST of MS007786 vs. ExPASy TrEMBL
Match: A0A6J5VW08 (S-protein homolog OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS941 PE=3 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 2.3e-27 Identity = 57/102 (55.88%), Postives = 71/102 (69.61%), Query Frame = 0
BLAST of MS007786 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 98.6 bits (244), Expect = 3.1e-21 Identity = 47/102 (46.08%), Postives = 60/102 (58.82%), Query Frame = 0
BLAST of MS007786 vs. TAIR 10
Match: AT3G16970.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 92.4 bits (228), Expect = 2.3e-19 Identity = 42/108 (38.89%), Postives = 59/108 (54.63%), Query Frame = 0
BLAST of MS007786 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 86.7 bits (213), Expect = 1.2e-17 Identity = 42/107 (39.25%), Postives = 53/107 (49.53%), Query Frame = 0
BLAST of MS007786 vs. TAIR 10
Match: AT5G12070.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 86.7 bits (213), Expect = 1.2e-17 Identity = 43/107 (40.19%), Postives = 60/107 (56.07%), Query Frame = 0
BLAST of MS007786 vs. TAIR 10
Match: AT3G17080.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 85.5 bits (210), Expect = 2.8e-17 Identity = 41/106 (38.68%), Postives = 55/106 (51.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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