MS007706 (gene) Bitter gourd (TR) v1

Overview


Name	MS007706
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	RING-H2 finger protein ATL16
Location	scaffold13: 615700 .. 616599 (-)
RNA-Seq Expression	MS007706
Synteny	MS007706

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGAAACCCTCATCTCCCCGTCGGCCGGTCCAGTTCATTCATCTAATTCCCCTGTTTCCAGTTTTCCGATCATCGCCGTCGCCGTCATCGGGATCTGCGCCACCGCGTTTTTGCTCGTGGGTTATTACATCTTCGTCATCAAGTGCTGTCTCAACTGGCAACGAATCGAAATCCTCCGCCGCTTCTCTCTGTCCCACCGCCGGGAAGAGGCTCTGATTCTCCGGCCGCCGGTGGAGCCACGTGGGCTGGACCCGTCGGAGATCCGATTGATCCCACTGGTTAATTACAAAAAACCCGCCGGCGAGTGCGCCGTTTGTCTGAGCGAATTTCAGCCGGAGGAGCAGCTGAGAAAAATTCCGATCTGCAGCCATCTATTTCACATTGATTGTATCGATATCTGGCTTCAGAATAATTCTAATTGCCCACTCTGTAGAACAAGAATCTCGACCCAAAATTGGCCAATTCCGGCCGATGAAACGACTCAAACTCCATCCCCTCGTCCAAATTCCGGCCGCCCCATCGCTACCACGGACGAGAATTTTGTTGTGATTGAATTGGGTCACAGTCACAACCGGCAGCATCCTCCGCCGTTGAGCTCCGGCGAGCCACCGGAATCGGGAAGAAAGTTTAAGAAGATTACGAGTATGGGGGATGAGTGTATCGACATGAGAGAGAAGGATGAGGAATTTTCAGTGCAACCCATCAGAAGGTCGTTTTCGATGGATTCTTCCGGCGACCGGCAGCTGTATATGGCGGTGCAGGCGGCGGTGCGGCAGAACAGGGGAGCATGTGAGAATGGGGTTGAGGGTTGCAGTAGCAGAGTACGGATATCTTTCTTTTCTTTTGGTAATGGTAGAGGATCAAGAAATTCAGTTTTACCCATTCATTTTCAAGTT

mRNA sequence

ATGGCCGAAACCCTCATCTCCCCGTCGGCCGGTCCAGTTCATTCATCTAATTCCCCTGTTTCCAGTTTTCCGATCATCGCCGTCGCCGTCATCGGGATCTGCGCCACCGCGTTTTTGCTCGTGGGTTATTACATCTTCGTCATCAAGTGCTGTCTCAACTGGCAACGAATCGAAATCCTCCGCCGCTTCTCTCTGTCCCACCGCCGGGAAGAGGCTCTGATTCTCCGGCCGCCGGTGGAGCCACGTGGGCTGGACCCGTCGGAGATCCGATTGATCCCACTGGTTAATTACAAAAAACCCGCCGGCGAGTGCGCCGTTTGTCTGAGCGAATTTCAGCCGGAGGAGCAGCTGAGAAAAATTCCGATCTGCAGCCATCTATTTCACATTGATTGTATCGATATCTGGCTTCAGAATAATTCTAATTGCCCACTCTGTAGAACAAGAATCTCGACCCAAAATTGGCCAATTCCGGCCGATGAAACGACTCAAACTCCATCCCCTCGTCCAAATTCCGGCCGCCCCATCGCTACCACGGACGAGAATTTTGTTGTGATTGAATTGGGTCACAGTCACAACCGGCAGCATCCTCCGCCGTTGAGCTCCGGCGAGCCACCGGAATCGGGAAGAAAGTTTAAGAAGATTACGAGTATGGGGGATGAGTGTATCGACATGAGAGAGAAGGATGAGGAATTTTCAGTGCAACCCATCAGAAGGTCGTTTTCGATGGATTCTTCCGGCGACCGGCAGCTGTATATGGCGGTGCAGGCGGCGGTGCGGCAGAACAGGGGAGCATGTGAGAATGGGGTTGAGGGTTGCAGTAGCAGAGTACGGATATCTTTCTTTTCTTTTGGTAATGGTAGAGGATCAAGAAATTCAGTTTTACCCATTCATTTTCAAGTT

Coding sequence (CDS)

ATGGCCGAAACCCTCATCTCCCCGTCGGCCGGTCCAGTTCATTCATCTAATTCCCCTGTTTCCAGTTTTCCGATCATCGCCGTCGCCGTCATCGGGATCTGCGCCACCGCGTTTTTGCTCGTGGGTTATTACATCTTCGTCATCAAGTGCTGTCTCAACTGGCAACGAATCGAAATCCTCCGCCGCTTCTCTCTGTCCCACCGCCGGGAAGAGGCTCTGATTCTCCGGCCGCCGGTGGAGCCACGTGGGCTGGACCCGTCGGAGATCCGATTGATCCCACTGGTTAATTACAAAAAACCCGCCGGCGAGTGCGCCGTTTGTCTGAGCGAATTTCAGCCGGAGGAGCAGCTGAGAAAAATTCCGATCTGCAGCCATCTATTTCACATTGATTGTATCGATATCTGGCTTCAGAATAATTCTAATTGCCCACTCTGTAGAACAAGAATCTCGACCCAAAATTGGCCAATTCCGGCCGATGAAACGACTCAAACTCCATCCCCTCGTCCAAATTCCGGCCGCCCCATCGCTACCACGGACGAGAATTTTGTTGTGATTGAATTGGGTCACAGTCACAACCGGCAGCATCCTCCGCCGTTGAGCTCCGGCGAGCCACCGGAATCGGGAAGAAAGTTTAAGAAGATTACGAGTATGGGGGATGAGTGTATCGACATGAGAGAGAAGGATGAGGAATTTTCAGTGCAACCCATCAGAAGGTCGTTTTCGATGGATTCTTCCGGCGACCGGCAGCTGTATATGGCGGTGCAGGCGGCGGTGCGGCAGAACAGGGGAGCATGTGAGAATGGGGTTGAGGGTTGCAGTAGCAGAGTACGGATATCTTTCTTTTCTTTTGGTAATGGTAGAGGATCAAGAAATTCAGTTTTACCCATTCATTTTCAAGTT

Protein sequence

MAETLISPSAGPVHSSNSPVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILRRFSLSHRREEALILRPPVEPRGLDPSEIRLIPLVNYKKPAGECAVCLSEFQPEEQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTRISTQNWPIPADETTQTPSPRPNSGRPIATTDENFVVIELGHSHNRQHPPPLSSGEPPESGRKFKKITSMGDECIDMREKDEEFSVQPIRRSFSMDSSGDRQLYMAVQAAVRQNRGACENGVEGCSSRVRISFFSFGNGRGSRNSVLPIHFQV

Homology

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BLAST of MS007706 vs. NCBI nr
Match: XP_038875603.1 (RING-H2 finger protein ATL16-like [Benincasa hispida])

HSP 1 Score: 453.0 bits (1164), Expect = 2.0e-123
Identity = 241/310 (77.74%), Postives = 259/310 (83.55%), Query Frame = 0


Query: 1   MAETLISPSAGPVHSSNSPVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEIL 60
           MA+TLISPS  P+HSSN PVSSFPIIAVAVIGICATAFLLV YY+FVIKCCLNWQRIEIL
Sbjct: 1   MAQTLISPSTSPLHSSN-PVSSFPIIAVAVIGICATAFLLVTYYVFVIKCCLNWQRIEIL 60

Query: 61  RRFSLSHRREEALILRPPVEPRGLDPSEIRLIPLVNYKKP------AGECAVCLSEFQPE 120
           RRFSLS RREE LILR P EPRGLDPS I+ IPL++YKKP       GECAVCL+EFQ E
Sbjct: 61  RRFSLSRRREETLILRQPAEPRGLDPSTIQSIPLISYKKPINETTSGGECAVCLTEFQTE 120

Query: 121 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTRISTQNWPIPADETTQTPSPRP---NS 180
           EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRT IS QNW IP D   Q PSP+    N+
Sbjct: 121 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAQNWLIPTD---QAPSPQDLGLNT 180

Query: 181 GRPIATTDENFVVIELGHSHNRQHPPPLSSGEPPESGRKFKKITSMGDECIDMREKDEEF 240
           G  I+  DENFVVIELG + +R+  P L S E  ESGRKFKK+TSMGDECIDMREKDEEF
Sbjct: 181 GSHISVADENFVVIELGRNLDRRRHPALGSSEAAESGRKFKKVTSMGDECIDMREKDEEF 240

Query: 241 SVQPIRRSFSMDSSGDRQLYMAVQAAVRQNRGACENG--VEGCSSRVRISFFSFGNGRGS 300
            VQPIRRSFSMDSSGDRQLYMAVQAAVR+ +G  ENG  VEGCSSRVR SFFSFG+GRGS
Sbjct: 241 IVQPIRRSFSMDSSGDRQLYMAVQAAVRE-KGDGENGVEVEGCSSRVRRSFFSFGSGRGS 300

[Close]

BLAST of MS007706 vs. NCBI nr
Match: XP_008460634.1 (PREDICTED: RING-H2 finger protein ATL16 [Cucumis melo] >KAA0065677.1 RING-H2 finger protein ATL16 [Cucumis melo var. makuwa] >TYK08225.1 RING-H2 finger protein ATL16 [Cucumis melo var. makuwa])

HSP 1 Score: 445.3 bits (1144), Expect = 4.2e-121
Identity = 235/307 (76.55%), Postives = 254/307 (82.74%), Query Frame = 0


Query: 1   MAETLISPSAGPVHSSNSPVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEIL 60
           MA+ LISPS  P+HSSN PVSSFPIIAVAVIGICATAFLLV YYIFVIKCCLNWQRIEIL
Sbjct: 1   MAQPLISPSTSPLHSSN-PVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEIL 60

Query: 61  RRFSLSHRREEALILRPPVEPRGLDPSEIRLIPLVNYKKP------AGECAVCLSEFQPE 120
           RRFSLS RRE+ LILR   EPRGLDPS I+ IPL+NYKKP       GECAVCL+EFQ E
Sbjct: 61  RRFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTE 120

Query: 121 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTRISTQNWPIPADETTQTPSPRPNSGRP 180
           EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRT IS QNW IP D+         N+G P
Sbjct: 121 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIP 180

Query: 181 IATTDENFVVIELGHSHNRQHPPPLSSGEPPESGRKFKKITSMGDECIDMREKDEEFSVQ 240
           I+  DENFVVIELG + +R+ PP L SGE  +S RKFKK+TSMGDECI+MREKDEEF VQ
Sbjct: 181 ISAGDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQ 240

Query: 241 PIRRSFSMDSSGDRQLYMAVQAAVRQNRGACENG--VEGCSSRVRISFFSFGNGRGSRNS 300
           PIRRSFSMDSSGDRQLYMAVQAAVR+  G  ENG  VEGCSSRV+ SFFSFG+GRGSRN+
Sbjct: 241 PIRRSFSMDSSGDRQLYMAVQAAVREKSGG-ENGVEVEGCSSRVKRSFFSFGSGRGSRNA 300

[Close]

BLAST of MS007706 vs. NCBI nr
Match: XP_004142260.1 (RING-H2 finger protein ATL16 [Cucumis sativus])

HSP 1 Score: 439.1 bits (1128), Expect = 3.0e-119
Identity = 237/311 (76.21%), Postives = 255/311 (81.99%), Query Frame = 0


Query: 1   MAETLISPSAGPVHSSNSPVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEIL 60
           MA+ LISPS  P+HSSN PVSSFPIIAVAVIGICATAFLLV YYIFVIKCCLNWQRIEIL
Sbjct: 1   MAQPLISPSTTPLHSSN-PVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEIL 60

Query: 61  RRFSLSHRREEALILRPPVEPRGLDPSEIRLIPLVNYKKP-------AGECAVCLSEFQP 120
           RRFSLS RRE+ LILR   EPRGLDPS I+ IPL+NYKKP        GECAVCL+EFQ 
Sbjct: 61  RRFSLSRRREQTLILRQQAEPRGLDPSTIQSIPLINYKKPINETTTTGGECAVCLTEFQT 120

Query: 121 EEQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTRISTQNWPIPADETTQTPSPRP---N 180
           EEQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRT IS QNW IP   T Q PS R    N
Sbjct: 121 EEQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIP---TNQAPSARDLALN 180

Query: 181 SGRPIATTDENFVVIELGHSHNRQHPPPLSSGEPPESGRKFKKITSMGDECIDMREKDEE 240
           +  PI+  DENFVVIELG + +R  PP L SGE  +S RKFKK+TSMGDECI+MREKDEE
Sbjct: 181 TSIPISAGDENFVVIELGGNLDRCRPPELVSGEVAKSERKFKKVTSMGDECINMREKDEE 240

Query: 241 FSVQPIRRSFSMDSSGDRQLYMAVQAAVRQNRGACENG--VEGCSSRVRISFFSFGNGRG 300
           F VQPIRRSFSMDSSGDRQLYMAVQAAVR+  G  E+G  VEGCSSRV+ SFFSFG+GRG
Sbjct: 241 FIVQPIRRSFSMDSSGDRQLYMAVQAAVREKSGG-ESGVEVEGCSSRVKRSFFSFGSGRG 300

[Close]

BLAST of MS007706 vs. NCBI nr
Match: XP_023548943.1 (RING-H2 finger protein ATL16-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 428.3 bits (1100), Expect = 5.4e-116
Identity = 233/312 (74.68%), Postives = 250/312 (80.13%), Query Frame = 0


Query: 1   MAETLISPSAGPVHSSNSPVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEIL 60
           M + LISPSA P+HSS + VSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEIL
Sbjct: 1   MEKPLISPSATPLHSSTA-VSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEIL 60

Query: 61  RRFSLSHRREEALILRPPVEPRGLDPSEIRLIPLVNYKKP------AGECAVCLSEFQPE 120
           RRFSLS RREE LILR PVEPRGLDPS I+ IPL+NYKKP       GECAVCL+EFQPE
Sbjct: 61  RRFSLSRRREETLILRQPVEPRGLDPSTIQSIPLINYKKPIKETTSGGECAVCLTEFQPE 120

Query: 121 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTRISTQNWPIPADETTQTPSPRP---NS 180
           EQLRKIPICSHLFHIDCIDIWLQNN NCPLCRT IS QNW IP D   Q+PSPR    NS
Sbjct: 121 EQLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPVD---QSPSPRDLPLNS 180

Query: 181 GRPIA--TTDENFVVIELGHSHNRQHPPPLSSGEPPESGRKFKKITSMGDECIDMREKDE 240
           G  +A  T D NFVVIELG + +R+ PPP            F K+TSMGDECIDMREKD+
Sbjct: 181 GSSVAATTADMNFVVIELGRNPDRRRPPP------------FGKVTSMGDECIDMREKDK 240

Query: 241 EFSVQPIRRSFSMDSSGDRQLYMAVQAAVRQNRGACENGV--EGCSSRVRISFFSFGNGR 300
           EF VQPIRRSFSMDSSGDRQLYMAVQAAVRQ+ G  E+ V  EGCS+RVR SFFSFG+GR
Sbjct: 241 EFLVQPIRRSFSMDSSGDRQLYMAVQAAVRQSGGGGESRVEAEGCSNRVRRSFFSFGSGR 296

[Close]

BLAST of MS007706 vs. NCBI nr
Match: XP_022958779.1 (RING-H2 finger protein ATL16-like [Cucurbita moschata])

HSP 1 Score: 424.5 bits (1090), Expect = 7.7e-115
Identity = 233/312 (74.68%), Postives = 250/312 (80.13%), Query Frame = 0


Query: 1   MAETLISPSAGPVHSSNSPVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEIL 60
           M + LISPSA P HSS + VSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEIL
Sbjct: 1   MEKPLISPSATPPHSSTA-VSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEIL 60

Query: 61  RRFSLSHRREEALILRPPVEPRGLDPSEIRLIPLVNYKKP------AGECAVCLSEFQPE 120
           RRFSLS RREE LILR PVEPRGLDPS I+ IPL+NYKKP       GECAVCL+EFQPE
Sbjct: 61  RRFSLSRRREETLILRQPVEPRGLDPSTIQSIPLINYKKPIKETSSGGECAVCLTEFQPE 120

Query: 121 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTRISTQNWPIPADETTQTPSPRP---NS 180
           EQLRKIPICSHLFHIDCIDIWLQNN NCPLCRT IS QNW IP D   Q PSPR    NS
Sbjct: 121 EQLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPID---QAPSPRDLPLNS 180

Query: 181 GRPIA--TTDENFVVIELGHSHNRQHPPPLSSGEPPESGRKFKKITSMGDECIDMREKDE 240
           G  +A  T+DENFVVIELG + +R+ PPP            F K+TSMGDECIDMREKD+
Sbjct: 181 GSSVAATTSDENFVVIELGRNPDRRRPPP------------FGKVTSMGDECIDMREKDK 240

Query: 241 EFSVQPIRRSFSMDSSGDRQLYMAVQAAVRQNRGACENGV--EGCSSRVRISFFSFGNGR 300
           EF VQPIRRSFSMDSSGDRQLYMAVQAAV+Q+ G  E+ V  EGCS+RVR SFFSFG+GR
Sbjct: 241 EFLVQPIRRSFSMDSSGDRQLYMAVQAAVQQSGGG-ESRVEAEGCSNRVRRSFFSFGSGR 295

[Close]

BLAST of MS007706 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 9.3e-71
Identity = 173/360 (48.06%), Postives = 212/360 (58.89%), Query Frame = 0


Query: 8   PSAGPV-HSSNSPVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILRRFSLS 67
           P   P+ H ++S  +SFPI+AVAVIGI ATAFLLV YY+FVIKCCLNW RI+IL RFSLS
Sbjct: 18  PPPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSLS 77

Query: 68  HRR----EEALILRPPVEPRGLDPSEIRLIPLVNYK-------------------KPAGE 127
            RR    +  ++  P +  RGLD S IR IP+  +K                   K + E
Sbjct: 78  RRRRNDQDPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQE 137

Query: 128 CAVCLSEFQPEEQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTRISTQNWPIPADETTQ 187
           C+VCLSEFQ EE+LR IP CSHLFHIDCID+WLQNN+NCPLCRTR+S      P D  + 
Sbjct: 138 CSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDT-SFPPDRVS- 197

Query: 188 TPSPRPNSGRPIATTDENFVVIELGHS---------HNR--------------------- 247
            PS  P +   +   +  +VVIELG S         H R                     
Sbjct: 198 APSTSPEN-LVMLRGENEYVVIELGSSIGSDRDSPRHGRLLTGQERSNSGYLLNENTQNS 257

Query: 248 --QHPPPLSSGEPPESGRKFKKITSMGDECIDMRE-KDEEF-SVQPIRRSFSMDSSGDRQ 300
               P  L  G  P   RK  K+TSMGDECID+R  KDE+F S+QPIRRS SMDSS DRQ
Sbjct: 258 ISPSPKKLDRGGLPRKFRKLHKMTSMGDECIDIRRGKDEQFGSIQPIRRSISMDSSADRQ 317

[Close]

BLAST of MS007706 vs. ExPASy Swiss-Prot
Match: P93823 (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 3.9e-61
Identity = 156/348 (44.83%), Postives = 200/348 (57.47%), Query Frame = 0


Query: 16  SNSPVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILRRFSLSHRREEALIL 75
           ++S  ++FPI+A+AVIGI ATAFLLV YYIFVIKCCLNW +I+I RR   S  +   +I 
Sbjct: 34  TSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSSDQNPLMIY 93

Query: 76  RPPVEPRGLDPSEIRLIPLVNYK------------KPAGECAVCLSEFQPEEQLRKIPIC 135
            P    RGLD S IR IP+  +K            K + EC+VCL+EFQ +E+LR IP C
Sbjct: 94  SPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNC 153

Query: 136 SHLFHIDCIDIWLQNNSNCPLCRTRISTQNWPIPADETTQTPSPRPNSGRP--------- 195
            H+FHIDCIDIWLQ N+NCPLCRT +S +      D  +   SPR NS            
Sbjct: 154 CHVFHIDCIDIWLQGNANCPLCRTSVSCEA-SFTLDLISAPSSPRENSPHSRNRNLEPGL 213

Query: 196 IATTDENFVVIELGHSH----------------NRQHPPPLSSGEPPES----------- 255
           +   D++FVVIELG S+                 R     +S+G  P+S           
Sbjct: 214 VLGGDDDFVVIELGASNGNNRESVRNIDFLTEQERVTSNEVSTGNSPKSVSPLPIKFGNR 273

Query: 256 -----GRKFKKITSMGDECIDMREKDEEF-SVQPIRRSFSMDSSGDRQLYMAVQAAV-RQ 300
                 RKF K+TSMGDECID R KD  F  +QPIRRS SMDSS DRQLY+AVQ  + R+
Sbjct: 274 GMYKKERKFHKVTSMGDECIDTRGKDGHFGEIQPIRRSISMDSSVDRQLYLAVQEEISRR 333

[Close]

BLAST of MS007706 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 102.1 bits (253), Expect = 1.2e-20
Identity = 86/260 (33.08%), Postives = 118/260 (45.38%), Query Frame = 0


Query: 17  NSPVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILRRFSLSHRREEALILR 76
           +S  S F  + +A+IGI A+AF+LV YY  + K C         RR   S     A I R
Sbjct: 50  DSSSSDFSPLLIALIGILASAFILVSYYTLISKYC--------HRRRHNSSSTSAAAINR 109

Query: 77  ----------------PPVEPR---------GLDPSEIRLIPLVNYKKPAG-----ECAV 136
                               P          GLD S I+ I +  Y+K  G     +C+V
Sbjct: 110 ISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSV 169

Query: 137 CLSEFQPEEQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTRISTQNWPIPADETTQTPS 196
           CLSEFQ  E LR +P C+H FH+ CID WL+++SNCPLCR  I T +     D T Q   
Sbjct: 170 CLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLTNQQIV 229

Query: 197 PRPNSGRPIATTDENFVVIELGHSHNRQHPPPLSSGEPPESGRKFKKITSMGDECIDMRE 247
              NS   I+T D++ VV+ L   ++R     ++ G  P+             E  D R+
Sbjct: 230 TENNS---ISTGDDSVVVVNLDLENSRSRNETVNEGSTPKP-----------PEMQDSRD 280

[Close]

BLAST of MS007706 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.0e-20
Identity = 77/256 (30.08%), Postives = 116/256 (45.31%), Query Frame = 0


Query: 16  SNSPVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILRRFSLSHRREE--AL 75
           S+S  SSF  + +A+IGI  +A +LV YY  + K C    +       +L+H  E   + 
Sbjct: 47  SSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSS 106

Query: 76  ILRPPVEPRGLDPSEIRLIPLVNYKKPAG-----ECAVCLSEFQPEEQLRKIPICSHLFH 135
             R      GL+ S I+ I +  YK   G     +C+VCLSEF+  E LR +P C+H FH
Sbjct: 107 TQRISTNGDGLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFH 166

Query: 136 IDCIDIWLQNNSNCPLCRTRISTQNWPIPADETTQTPSPRPNSGRPIATTDENFVVIELG 195
           + CID WL+++SNCPLCR  ++  N                    P A+  +N  V+   
Sbjct: 167 LPCIDTWLKSHSNCPLCRAFVTGVN-------------------NPTASVGQNVSVVVAN 226

Query: 196 HSHNRQHPPPLS------SGEPPESGRKFKKITSMGDECIDMREKDEEFSVQ-------- 245
            S++      +S      +G   ++G  F  +  + D  I  R  D    +Q        
Sbjct: 227 QSNSAHQTGSVSEINLNLAGYESQTG-DFDSVVVIEDLEIGSRNSDARSELQLPEERRET 282

[Close]

BLAST of MS007706 vs. ExPASy Swiss-Prot
Match: Q7XLY8 (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 91.3 bits (225), Expect = 2.0e-17
Identity = 85/281 (30.25%), Postives = 121/281 (43.06%), Query Frame = 0


Query: 1   MAETLISPSAGPVHSSNSPVSSFPIIAVAVIGICATAFLLVGYYIFVIKCC--LNWQRIE 60
           +A T    S+GPV         F  + +A+IG+ A+AFLLV YY F+ K C  ++  R  
Sbjct: 42  VAGTSADDSSGPV---------FSPLVIAIIGVLASAFLLVSYYTFISKYCGTVSSLRGR 101

Query: 61  IL-----------------RRFSLSHRREEALILRPPVEPRGLDPSEIRLIPLVNYKKPA 120
           +                  R      R  E+  + P   P GLD + I  I +  Y++  
Sbjct: 102 VFGSSSGGAAYGGGAGSGGRHGHGQSRSHESWNVSP---PSGLDETLINKITVCKYRRGD 161

Query: 121 G-----ECAVCLSEFQPEEQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTRISTQNWPI 180
           G     +C+VCL EF   E LR +P CSH FH  CID WL+++SNCPLCR  I+      
Sbjct: 162 GFVHTTDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRANITF----- 221

Query: 181 PADETTQTPSPRPNSGRPIATTDENF--VVIELGHSHN--RQHPPPLSSGEPPESGRKFK 240
               T    SP P    P  T  +N   VV+ +    N   +    +S     +     K
Sbjct: 222 ---VTVGLASPEPEGCAPGETGGDNTHEVVVVMDGLENLCEEQQEAVSRASTADDDHDAK 281

Query: 241 KITSMGDECIDMREKDEEFSVQPIRRSFSMDSSGDRQLYMA 254
            +    +E     E  EE S  P R + S D   D ++ +A
Sbjct: 282 DVAEGMEEANGAAEIREEGS-PPKRGASSFDLHRDNRMCIA 301

[Close]

BLAST of MS007706 vs. ExPASy TrEMBL
Match: A0A5A7VEZ8 (RING-H2 finger protein ATL16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00490 PE=4 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 2.1e-121
Identity = 235/307 (76.55%), Postives = 254/307 (82.74%), Query Frame = 0


Query: 1   MAETLISPSAGPVHSSNSPVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEIL 60
           MA+ LISPS  P+HSSN PVSSFPIIAVAVIGICATAFLLV YYIFVIKCCLNWQRIEIL
Sbjct: 1   MAQPLISPSTSPLHSSN-PVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEIL 60

Query: 61  RRFSLSHRREEALILRPPVEPRGLDPSEIRLIPLVNYKKP------AGECAVCLSEFQPE 120
           RRFSLS RRE+ LILR   EPRGLDPS I+ IPL+NYKKP       GECAVCL+EFQ E
Sbjct: 61  RRFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTE 120

Query: 121 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTRISTQNWPIPADETTQTPSPRPNSGRP 180
           EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRT IS QNW IP D+         N+G P
Sbjct: 121 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIP 180

Query: 181 IATTDENFVVIELGHSHNRQHPPPLSSGEPPESGRKFKKITSMGDECIDMREKDEEFSVQ 240
           I+  DENFVVIELG + +R+ PP L SGE  +S RKFKK+TSMGDECI+MREKDEEF VQ
Sbjct: 181 ISAGDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQ 240

Query: 241 PIRRSFSMDSSGDRQLYMAVQAAVRQNRGACENG--VEGCSSRVRISFFSFGNGRGSRNS 300
           PIRRSFSMDSSGDRQLYMAVQAAVR+  G  ENG  VEGCSSRV+ SFFSFG+GRGSRN+
Sbjct: 241 PIRRSFSMDSSGDRQLYMAVQAAVREKSGG-ENGVEVEGCSSRVKRSFFSFGSGRGSRNA 300

[Close]

BLAST of MS007706 vs. ExPASy TrEMBL
Match: A0A1S3CD01 (RING-H2 finger protein ATL16 OS=Cucumis melo OX=3656 GN=LOC103499411 PE=4 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 2.1e-121
Identity = 235/307 (76.55%), Postives = 254/307 (82.74%), Query Frame = 0


Query: 1   MAETLISPSAGPVHSSNSPVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEIL 60
           MA+ LISPS  P+HSSN PVSSFPIIAVAVIGICATAFLLV YYIFVIKCCLNWQRIEIL
Sbjct: 1   MAQPLISPSTSPLHSSN-PVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEIL 60

Query: 61  RRFSLSHRREEALILRPPVEPRGLDPSEIRLIPLVNYKKP------AGECAVCLSEFQPE 120
           RRFSLS RRE+ LILR   EPRGLDPS I+ IPL+NYKKP       GECAVCL+EFQ E
Sbjct: 61  RRFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTE 120

Query: 121 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTRISTQNWPIPADETTQTPSPRPNSGRP 180
           EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRT IS QNW IP D+         N+G P
Sbjct: 121 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIP 180

Query: 181 IATTDENFVVIELGHSHNRQHPPPLSSGEPPESGRKFKKITSMGDECIDMREKDEEFSVQ 240
           I+  DENFVVIELG + +R+ PP L SGE  +S RKFKK+TSMGDECI+MREKDEEF VQ
Sbjct: 181 ISAGDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQ 240

Query: 241 PIRRSFSMDSSGDRQLYMAVQAAVRQNRGACENG--VEGCSSRVRISFFSFGNGRGSRNS 300
           PIRRSFSMDSSGDRQLYMAVQAAVR+  G  ENG  VEGCSSRV+ SFFSFG+GRGSRN+
Sbjct: 241 PIRRSFSMDSSGDRQLYMAVQAAVREKSGG-ENGVEVEGCSSRVKRSFFSFGSGRGSRNA 300

[Close]

BLAST of MS007706 vs. ExPASy TrEMBL
Match: A0A0A0LNP5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G178720 PE=4 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 1.5e-119
Identity = 237/311 (76.21%), Postives = 255/311 (81.99%), Query Frame = 0


Query: 1   MAETLISPSAGPVHSSNSPVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEIL 60
           MA+ LISPS  P+HSSN PVSSFPIIAVAVIGICATAFLLV YYIFVIKCCLNWQRIEIL
Sbjct: 1   MAQPLISPSTTPLHSSN-PVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEIL 60

Query: 61  RRFSLSHRREEALILRPPVEPRGLDPSEIRLIPLVNYKKP-------AGECAVCLSEFQP 120
           RRFSLS RRE+ LILR   EPRGLDPS I+ IPL+NYKKP        GECAVCL+EFQ 
Sbjct: 61  RRFSLSRRREQTLILRQQAEPRGLDPSTIQSIPLINYKKPINETTTTGGECAVCLTEFQT 120

Query: 121 EEQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTRISTQNWPIPADETTQTPSPRP---N 180
           EEQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRT IS QNW IP   T Q PS R    N
Sbjct: 121 EEQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIP---TNQAPSARDLALN 180

Query: 181 SGRPIATTDENFVVIELGHSHNRQHPPPLSSGEPPESGRKFKKITSMGDECIDMREKDEE 240
           +  PI+  DENFVVIELG + +R  PP L SGE  +S RKFKK+TSMGDECI+MREKDEE
Sbjct: 181 TSIPISAGDENFVVIELGGNLDRCRPPELVSGEVAKSERKFKKVTSMGDECINMREKDEE 240

Query: 241 FSVQPIRRSFSMDSSGDRQLYMAVQAAVRQNRGACENG--VEGCSSRVRISFFSFGNGRG 300
           F VQPIRRSFSMDSSGDRQLYMAVQAAVR+  G  E+G  VEGCSSRV+ SFFSFG+GRG
Sbjct: 241 FIVQPIRRSFSMDSSGDRQLYMAVQAAVREKSGG-ESGVEVEGCSSRVKRSFFSFGSGRG 300

[Close]

BLAST of MS007706 vs. ExPASy TrEMBL
Match: A0A6J1H640 (RING-H2 finger protein ATL16-like OS=Cucurbita moschata OX=3662 GN=LOC111459948 PE=4 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 3.7e-115
Identity = 233/312 (74.68%), Postives = 250/312 (80.13%), Query Frame = 0


Query: 1   MAETLISPSAGPVHSSNSPVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEIL 60
           M + LISPSA P HSS + VSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEIL
Sbjct: 1   MEKPLISPSATPPHSSTA-VSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEIL 60

Query: 61  RRFSLSHRREEALILRPPVEPRGLDPSEIRLIPLVNYKKP------AGECAVCLSEFQPE 120
           RRFSLS RREE LILR PVEPRGLDPS I+ IPL+NYKKP       GECAVCL+EFQPE
Sbjct: 61  RRFSLSRRREETLILRQPVEPRGLDPSTIQSIPLINYKKPIKETSSGGECAVCLTEFQPE 120

Query: 121 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTRISTQNWPIPADETTQTPSPRP---NS 180
           EQLRKIPICSHLFHIDCIDIWLQNN NCPLCRT IS QNW IP D   Q PSPR    NS
Sbjct: 121 EQLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPID---QAPSPRDLPLNS 180

Query: 181 GRPIA--TTDENFVVIELGHSHNRQHPPPLSSGEPPESGRKFKKITSMGDECIDMREKDE 240
           G  +A  T+DENFVVIELG + +R+ PPP            F K+TSMGDECIDMREKD+
Sbjct: 181 GSSVAATTSDENFVVIELGRNPDRRRPPP------------FGKVTSMGDECIDMREKDK 240

Query: 241 EFSVQPIRRSFSMDSSGDRQLYMAVQAAVRQNRGACENGV--EGCSSRVRISFFSFGNGR 300
           EF VQPIRRSFSMDSSGDRQLYMAVQAAV+Q+ G  E+ V  EGCS+RVR SFFSFG+GR
Sbjct: 241 EFLVQPIRRSFSMDSSGDRQLYMAVQAAVQQSGGG-ESRVEAEGCSNRVRRSFFSFGSGR 295

[Close]

BLAST of MS007706 vs. ExPASy TrEMBL
Match: A0A6J1L4L0 (RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111499094 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.4e-114
Identity = 231/312 (74.04%), Postives = 248/312 (79.49%), Query Frame = 0


Query: 1   MAETLISPSAGPVHSSNSPVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEIL 60
           M + LISPSA P+HSS S VSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEIL
Sbjct: 1   MEKPLISPSATPLHSSTS-VSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEIL 60

Query: 61  RRFSLSHRREEALILRPPVEPRGLDPSEIRLIPLVNYKKP------AGECAVCLSEFQPE 120
           RRFSLS RREE LILR P +PRGLDPS I+ IPL+NYKKP       GECAVCL+EF+PE
Sbjct: 61  RRFSLSRRREETLILRQPADPRGLDPSTIQSIPLINYKKPIKETASGGECAVCLTEFRPE 120

Query: 121 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTRISTQNWPIPADETTQTPSPRP---NS 180
           EQLRKIPICSHLFHIDCIDIWLQNN NCPLCRT IS QNW IP D   Q PSPR    NS
Sbjct: 121 EQLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPVD---QAPSPRDLALNS 180

Query: 181 GRPI--ATTDENFVVIELGHSHNRQHPPPLSSGEPPESGRKFKKITSMGDECIDMREKDE 240
           G  +   T DENFVVIELG + +R+ PPP            F K+TSMGDECIDMREKD+
Sbjct: 181 GSSVDATTADENFVVIELGRNPDRRRPPP------------FGKVTSMGDECIDMREKDK 240

Query: 241 EFSVQPIRRSFSMDSSGDRQLYMAVQAAVRQNRGACENGV--EGCSSRVRISFFSFGNGR 300
           EF VQPIRRSFSMDSSGDRQLYMAVQAAVRQ+ G  E+ V  EGCS+RVR SFFSFG+GR
Sbjct: 241 EFLVQPIRRSFSMDSSGDRQLYMAVQAAVRQSGGG-ESRVEAEGCSNRVRRSFFSFGSGR 295

[Close]

BLAST of MS007706 vs. TAIR 10
Match: AT5G43420.1 (RING/U-box superfamily protein )

HSP 1 Score: 268.5 bits (685), Expect = 6.6e-72
Identity = 173/360 (48.06%), Postives = 212/360 (58.89%), Query Frame = 0


Query: 8   PSAGPV-HSSNSPVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILRRFSLS 67
           P   P+ H ++S  +SFPI+AVAVIGI ATAFLLV YY+FVIKCCLNW RI+IL RFSLS
Sbjct: 18  PPPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSLS 77

Query: 68  HRR----EEALILRPPVEPRGLDPSEIRLIPLVNYK-------------------KPAGE 127
            RR    +  ++  P +  RGLD S IR IP+  +K                   K + E
Sbjct: 78  RRRRNDQDPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQE 137

Query: 128 CAVCLSEFQPEEQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTRISTQNWPIPADETTQ 187
           C+VCLSEFQ EE+LR IP CSHLFHIDCID+WLQNN+NCPLCRTR+S      P D  + 
Sbjct: 138 CSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDT-SFPPDRVS- 197

Query: 188 TPSPRPNSGRPIATTDENFVVIELGHS---------HNR--------------------- 247
            PS  P +   +   +  +VVIELG S         H R                     
Sbjct: 198 APSTSPEN-LVMLRGENEYVVIELGSSIGSDRDSPRHGRLLTGQERSNSGYLLNENTQNS 257

Query: 248 --QHPPPLSSGEPPESGRKFKKITSMGDECIDMRE-KDEEF-SVQPIRRSFSMDSSGDRQ 300
               P  L  G  P   RK  K+TSMGDECID+R  KDE+F S+QPIRRS SMDSS DRQ
Sbjct: 258 ISPSPKKLDRGGLPRKFRKLHKMTSMGDECIDIRRGKDEQFGSIQPIRRSISMDSSADRQ 317

[Close]

BLAST of MS007706 vs. TAIR 10
Match: AT1G04360.1 (RING/U-box superfamily protein )

HSP 1 Score: 236.5 bits (602), Expect = 2.8e-62
Identity = 156/348 (44.83%), Postives = 200/348 (57.47%), Query Frame = 0


Query: 16  SNSPVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILRRFSLSHRREEALIL 75
           ++S  ++FPI+A+AVIGI ATAFLLV YYIFVIKCCLNW +I+I RR   S  +   +I 
Sbjct: 34  TSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSSDQNPLMIY 93

Query: 76  RPPVEPRGLDPSEIRLIPLVNYK------------KPAGECAVCLSEFQPEEQLRKIPIC 135
            P    RGLD S IR IP+  +K            K + EC+VCL+EFQ +E+LR IP C
Sbjct: 94  SPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNC 153

Query: 136 SHLFHIDCIDIWLQNNSNCPLCRTRISTQNWPIPADETTQTPSPRPNSGRP--------- 195
            H+FHIDCIDIWLQ N+NCPLCRT +S +      D  +   SPR NS            
Sbjct: 154 CHVFHIDCIDIWLQGNANCPLCRTSVSCEA-SFTLDLISAPSSPRENSPHSRNRNLEPGL 213

Query: 196 IATTDENFVVIELGHSH----------------NRQHPPPLSSGEPPES----------- 255
           +   D++FVVIELG S+                 R     +S+G  P+S           
Sbjct: 214 VLGGDDDFVVIELGASNGNNRESVRNIDFLTEQERVTSNEVSTGNSPKSVSPLPIKFGNR 273

Query: 256 -----GRKFKKITSMGDECIDMREKDEEF-SVQPIRRSFSMDSSGDRQLYMAVQAAV-RQ 300
                 RKF K+TSMGDECID R KD  F  +QPIRRS SMDSS DRQLY+AVQ  + R+
Sbjct: 274 GMYKKERKFHKVTSMGDECIDTRGKDGHFGEIQPIRRSISMDSSVDRQLYLAVQEEISRR 333

[Close]

BLAST of MS007706 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 102.1 bits (253), Expect = 8.2e-22
Identity = 86/260 (33.08%), Postives = 118/260 (45.38%), Query Frame = 0


Query: 17  NSPVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILRRFSLSHRREEALILR 76
           +S  S F  + +A+IGI A+AF+LV YY  + K C         RR   S     A I R
Sbjct: 50  DSSSSDFSPLLIALIGILASAFILVSYYTLISKYC--------HRRRHNSSSTSAAAINR 109

Query: 77  ----------------PPVEPR---------GLDPSEIRLIPLVNYKKPAG-----ECAV 136
                               P          GLD S I+ I +  Y+K  G     +C+V
Sbjct: 110 ISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSV 169

Query: 137 CLSEFQPEEQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTRISTQNWPIPADETTQTPS 196
           CLSEFQ  E LR +P C+H FH+ CID WL+++SNCPLCR  I T +     D T Q   
Sbjct: 170 CLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLTNQQIV 229

Query: 197 PRPNSGRPIATTDENFVVIELGHSHNRQHPPPLSSGEPPESGRKFKKITSMGDECIDMRE 247
              NS   I+T D++ VV+ L   ++R     ++ G  P+             E  D R+
Sbjct: 230 TENNS---ISTGDDSVVVVNLDLENSRSRNETVNEGSTPKP-----------PEMQDSRD 280

[Close]

BLAST of MS007706 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 101.3 bits (251), Expect = 1.4e-21
Identity = 77/256 (30.08%), Postives = 116/256 (45.31%), Query Frame = 0


Query: 16  SNSPVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILRRFSLSHRREE--AL 75
           S+S  SSF  + +A+IGI  +A +LV YY  + K C    +       +L+H  E   + 
Sbjct: 47  SSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSS 106

Query: 76  ILRPPVEPRGLDPSEIRLIPLVNYKKPAG-----ECAVCLSEFQPEEQLRKIPICSHLFH 135
             R      GL+ S I+ I +  YK   G     +C+VCLSEF+  E LR +P C+H FH
Sbjct: 107 TQRISTNGDGLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFH 166

Query: 136 IDCIDIWLQNNSNCPLCRTRISTQNWPIPADETTQTPSPRPNSGRPIATTDENFVVIELG 195
           + CID WL+++SNCPLCR  ++  N                    P A+  +N  V+   
Sbjct: 167 LPCIDTWLKSHSNCPLCRAFVTGVN-------------------NPTASVGQNVSVVVAN 226

Query: 196 HSHNRQHPPPLS------SGEPPESGRKFKKITSMGDECIDMREKDEEFSVQ-------- 245
            S++      +S      +G   ++G  F  +  + D  I  R  D    +Q        
Sbjct: 227 QSNSAHQTGSVSEINLNLAGYESQTG-DFDSVVVIEDLEIGSRNSDARSELQLPEERRET 282

[Close]

BLAST of MS007706 vs. TAIR 10
Match: AT1G23980.1 (RING/U-box superfamily protein )

HSP 1 Score: 85.1 bits (209), Expect = 1.0e-16
Identity = 58/148 (39.19%), Postives = 82/148 (55.41%), Query Frame = 0


Query: 7   SPSAGPVHSSNSPVSSFPIIAVAVI-GICATAFLLVGYYIFVIKCCLNWQRIEILR--RF 66
           S S+   ++  SP+  F I+ ++VI  IC+   LLV YY+   +  L+    E  +   F
Sbjct: 39  SSSSSGGNNRISPIILFIIVLLSVIFFICSILHLLVRYYLKKKRSNLSSSPNESNQNPEF 98

Query: 67  SLSHRREEALILRPPVEPRGLDPSEIRLIPLVNYKKPAG-----ECAVCLSEFQPEEQLR 126
           S S   +  L     +   GLD + I  +P+  YK+  G     +CAVCL EF  +++LR
Sbjct: 99  SDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLR 158

Query: 127 KIPICSHLFHIDCIDIWLQNNSNCPLCR 147
            +P CSH FHIDCID WL +NS CPLCR
Sbjct: 159 LLPNCSHAFHIDCIDTWLLSNSTCPLCR 186

The following BLAST results are available for this feature:

BLAST of MS007706 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875603.1	2.0e-123	77.74	RING-H2 finger protein ATL16-like [Benincasa hispida]	[more]
XP_008460634.1	4.2e-121	76.55	PREDICTED: RING-H2 finger protein ATL16 [Cucumis melo] >KAA0065677.1 RING-H2 fin...	[more]
XP_004142260.1	3.0e-119	76.21	RING-H2 finger protein ATL16 [Cucumis sativus]	[more]
XP_023548943.1	5.4e-116	74.68	RING-H2 finger protein ATL16-like [Cucurbita pepo subsp. pepo]	[more]
XP_022958779.1	7.7e-115	74.68	RING-H2 finger protein ATL16-like [Cucurbita moschata]	[more]

BLAST of MS007706 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSW9	9.3e-71	48.06	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1	[more]
P93823	3.9e-61	44.83	RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1	[more]
Q9SRQ8	1.2e-20	33.08	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]
Q9LF64	2.0e-20	30.08	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q7XLY8	2.0e-17	30.25	E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=3994...	[more]

BLAST of MS007706 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VEZ8	2.1e-121	76.55	RING-H2 finger protein ATL16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3CD01	2.1e-121	76.55	RING-H2 finger protein ATL16 OS=Cucumis melo OX=3656 GN=LOC103499411 PE=4 SV=1	[more]
A0A0A0LNP5	1.5e-119	76.21	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G178720 P...	[more]
A0A6J1H640	3.7e-115	74.68	RING-H2 finger protein ATL16-like OS=Cucurbita moschata OX=3662 GN=LOC111459948 ...	[more]
A0A6J1L4L0	1.4e-114	74.04	RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111499094 PE...	[more]

BLAST of MS007706 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43420.1	6.6e-72	48.06	RING/U-box superfamily protein	[more]
AT1G04360.1	2.8e-62	44.83	RING/U-box superfamily protein	[more]
AT3G03550.1	8.2e-22	33.08	RING/U-box superfamily protein	[more]
AT5G17600.1	1.4e-21	30.08	RING/U-box superfamily protein	[more]
AT1G23980.1	1.0e-16	39.19	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 104..145 e-value: 1.1E-5 score: 34.9
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 103..146 e-value: 2.2E-12 score: 47.1
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 104..146 score: 12.282736
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 78..152 e-value: 2.9E-19 score: 70.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..210
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..176
None	No IPR available	PANTHER	PTHR46913:SF1	RING-H2 FINGER PROTEIN ATL16	coord: 13..299
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 103..146 e-value: 2.95193E-16 score: 69.2529
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 103..157
IPR044600	RING-H2 finger protein ATL1/ATL16	PANTHER	PTHR46913	RING-H2 FINGER PROTEIN ATL16	coord: 13..299

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS007706.1	MS007706.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0016740	transferase activity