MS007684 (gene) Bitter gourd (TR) v1

Overview


Name	MS007684
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	transcription factor bHLH92
Location	scaffold13: 466271 .. 467343 (+)
RNA-Seq Expression	MS007684
Synteny	MS007684

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGACGGCTTTCCGGTGGAATTCTGGCAGAGCGATGCCTTTTGGCTCGATGCCGATCTCGCTCCGGTGGCCCGAACAAGTGCTTTTGACCCGTACTCGACCCGAACCAATGCCAGGTTCGGGCAAGATAACAATCTCGCCACCCCTGCAGCCGTTGTCGGTGACAATTCTCGGAACATCAACAAGAGGATGATCGAATTCTGGAGAAAGAAGTGGCTTGAAAAAAATAAAGCAGCAGCTGCAGGAGAAGATCTAGAGAGGGAGAAGAATTATAGGCATATGTTGAATGAAAGGTTGAGGAGGGATAAACAAAGAAAGAGCTACCTTGAGCTGCACTCCATGCTCCCAAAAAAAACTAAGGTTCGCTTAAGAAAACTTTTTTTTTTTTCGGTATATGGACTACTGTTCTCGTAGTCAATTACGTAATGTACTAATGTTGTAATTTTCCTCATTGTTTTTTGCAGAACGATAAGAATTCGATCGTTCAAATGGCGGCGAGTACAATACAAGAGCTTAAAACATTAGAGGCAATTTTAGAGGGGAGAAATTTAGAGTTGGAGATGGCATTAGCGGCACGGAAGAGAGAGAAAGAAAATGGGACGACGACGACGATTAGGGTAGCGTTGGCGAACCCTTCGTCGGGGATCAACTCGATGCTTGCCATTCTCAACGTTCTCAAAACCGTCGGAGTAAACGTGAAAGTCATTAGCGCTAATTTCTTCGACGCTGAGTTTTCAGCACAATTAGACATTGATCACACCCAAGTAAGAATCTTCTCCCTCAAGATCAGCGGAGTTAGAAAAGCAAATTAAAGAGAAAACTTTATAATCTTAATTTTTTTTTTTTCTAATTTAAGATTGAAGATGTAGAATTTAGAGTCAGTTTCATATGGTGAGAATGGAAAAGAAAAATATGAAGAAATTTTGTTGTTTGATTGATTGTAGATGATGGGAGCTGCCGAAGTGGAAAGAGTGGTGCAGCTGACGCTAACCGAAGCAGAGAGGAAATTTCAAGGGCAGTGCCAGGAAAGAACAAAATTCATAAAACAAAGTTATTTTAATTTTAATAAT

mRNA sequence

ATGGACGACGGCTTTCCGGTGGAATTCTGGCAGAGCGATGCCTTTTGGCTCGATGCCGATCTCGCTCCGGTGGCCCGAACAAGTGCTTTTGACCCGTACTCGACCCGAACCAATGCCAGGTTCGGGCAAGATAACAATCTCGCCACCCCTGCAGCCGTTGTCGGTGACAATTCTCGGAACATCAACAAGAGGATGATCGAATTCTGGAGAAAGAAGTGGCTTGAAAAAAATAAAGCAGCAGCTGCAGGAGAAGATCTAGAGAGGGAGAAGAATTATAGGCATATGTTGAATGAAAGGTTGAGGAGGGATAAACAAAGAAAGAGCTACCTTGAGCTGCACTCCATGCTCCCAAAAAAAACTAAGAACGATAAGAATTCGATCGTTCAAATGGCGGCGAGTACAATACAAGAGCTTAAAACATTAGAGGCAATTTTAGAGGGGAGAAATTTAGAGTTGGAGATGGCATTAGCGGCACGGAAGAGAGAGAAAGAAAATGGGACGACGACGACGATTAGGGTAGCGTTGGCGAACCCTTCGTCGGGGATCAACTCGATGCTTGCCATTCTCAACGTTCTCAAAACCGTCGGAGTAAACGTGAAAGTCATTAGCGCTAATTTCTTCGACGCTGAGTTTTCAGCACAATTAGACATTGATCACACCCAAATGATGGGAGCTGCCGAAGTGGAAAGAGTGGTGCAGCTGACGCTAACCGAAGCAGAGAGGAAATTTCAAGGGCAGTGCCAGGAAAGAACAAAATTCATAAAACAAAGTTATTTTAATTTTAATAAT

Coding sequence (CDS)

ATGGACGACGGCTTTCCGGTGGAATTCTGGCAGAGCGATGCCTTTTGGCTCGATGCCGATCTCGCTCCGGTGGCCCGAACAAGTGCTTTTGACCCGTACTCGACCCGAACCAATGCCAGGTTCGGGCAAGATAACAATCTCGCCACCCCTGCAGCCGTTGTCGGTGACAATTCTCGGAACATCAACAAGAGGATGATCGAATTCTGGAGAAAGAAGTGGCTTGAAAAAAATAAAGCAGCAGCTGCAGGAGAAGATCTAGAGAGGGAGAAGAATTATAGGCATATGTTGAATGAAAGGTTGAGGAGGGATAAACAAAGAAAGAGCTACCTTGAGCTGCACTCCATGCTCCCAAAAAAAACTAAGAACGATAAGAATTCGATCGTTCAAATGGCGGCGAGTACAATACAAGAGCTTAAAACATTAGAGGCAATTTTAGAGGGGAGAAATTTAGAGTTGGAGATGGCATTAGCGGCACGGAAGAGAGAGAAAGAAAATGGGACGACGACGACGATTAGGGTAGCGTTGGCGAACCCTTCGTCGGGGATCAACTCGATGCTTGCCATTCTCAACGTTCTCAAAACCGTCGGAGTAAACGTGAAAGTCATTAGCGCTAATTTCTTCGACGCTGAGTTTTCAGCACAATTAGACATTGATCACACCCAAATGATGGGAGCTGCCGAAGTGGAAAGAGTGGTGCAGCTGACGCTAACCGAAGCAGAGAGGAAATTTCAAGGGCAGTGCCAGGAAAGAACAAAATTCATAAAACAAAGTTATTTTAATTTTAATAAT

Protein sequence

MDDGFPVEFWQSDAFWLDADLAPVARTSAFDPYSTRTNARFGQDNNLATPAAVVGDNSRNINKRMIEFWRKKWLEKNKAAAAGEDLEREKNYRHMLNERLRRDKQRKSYLELHSMLPKKTKNDKNSIVQMAASTIQELKTLEAILEGRNLELEMALAARKREKENGTTTTIRVALANPSSGINSMLAILNVLKTVGVNVKVISANFFDAEFSAQLDIDHTQMMGAAEVERVVQLTLTEAERKFQGQCQERTKFIKQSYFNFNN

Homology

[Close]

BLAST of MS007684 vs. NCBI nr
Match: XP_022138697.1 (transcription factor bHLH92 [Momordica charantia])

HSP 1 Score: 488.4 bits (1256), Expect = 3.8e-134
Identity = 255/263 (96.96%), Postives = 260/263 (98.86%), Query Frame = 0


Query: 1   MDDGFPVEFWQSDAFWLDADLAPVARTSAFDPYSTRTNARFGQDNNLATPAAVVGDNSRN 60
           MDDGFPVEFWQSDAFWLDADLAPVARTSAFDPYSTRTNARFGQDNNLAT AA+VGDNSRN
Sbjct: 1   MDDGFPVEFWQSDAFWLDADLAPVARTSAFDPYSTRTNARFGQDNNLATAAAIVGDNSRN 60

Query: 61  INKRMIEFWRKKWLEKNKAAAAGEDLEREKNYRHMLNERLRRDKQRKSYLELHSMLPKKT 120
           INKRMIEFWRKKW EKNKAAAAGEDLEREKNYRHMLNERLRR+KQRKSYLELHSMLPKKT
Sbjct: 61  INKRMIEFWRKKWHEKNKAAAAGEDLEREKNYRHMLNERLRREKQRKSYLELHSMLPKKT 120

Query: 121 KNDKNSIVQMAASTIQELKTLEAILEGRNLELEMALAARKREKENGTTTTIRVALANPSS 180
           KNDKNSIVQMAASTIQELKTLEAILE R+LELE+ALAARKREKENGTTTTIRVALANPSS
Sbjct: 121 KNDKNSIVQMAASTIQELKTLEAILERRDLELEIALAARKREKENGTTTTIRVALANPSS 180

Query: 181 GINSMLAILNVLKTVGVNVKVISANFFDAEFSAQLDIDHTQMMGAAEVERVVQLTLTEAE 240
           GINSMLAILNVLKTVGVNVKVI+ANFFDAEFSAQLDIDHTQMMGAAEVERVVQLTLTEAE
Sbjct: 181 GINSMLAILNVLKTVGVNVKVINANFFDAEFSAQLDIDHTQMMGAAEVERVVQLTLTEAE 240

Query: 241 RKFQGQCQERTKFIKQSYFNFNN 264
           RKFQGQCQERTKFIKQSYFNFNN
Sbjct: 241 RKFQGQCQERTKFIKQSYFNFNN 263

[Close]

BLAST of MS007684 vs. NCBI nr
Match: XP_038875776.1 (transcription factor bHLH92 [Benincasa hispida])

HSP 1 Score: 301.6 bits (771), Expect = 6.6e-78
Identity = 169/279 (60.57%), Postives = 202/279 (72.40%), Query Frame = 0


Query: 1   MDDGFPVEFWQSDAFWLDADL---------APVARTSAFDPYSTRTNARFGQDNNLATPA 60
           MDD F VE+W +D FWLDA +         AP  + SAF PY TR     GQ+NN  T A
Sbjct: 1   MDDSFSVEYWHNDFFWLDAPISVPVPASTSAPARQISAFVPYLTRPATGLGQENNPTTSA 60

Query: 61  AVV-------GDNSRNINKRMIEFWRKKWLEKNKAAAAGEDLEREKNYRHMLNERLRRDK 120
           A           NSRN+NKRM+E+WRK W EK +  + G D EREK +RHMLNER+RR+K
Sbjct: 61  AAATVTTTSSSYNSRNVNKRMVEYWRKHWHEKKEPTSLG-DFEREKCHRHMLNERMRREK 120

Query: 121 QRKSYLELHSMLPKKTKNDKNSIVQMAASTIQELKTLEAILEGRNLELEMALAARKREKE 180
           Q++SYL LHSMLPK TKNDKNSI+Q A  TIQE+K LE  L+ RNLELEMA+A +K+EKE
Sbjct: 121 QKQSYLALHSMLPKNTKNDKNSIIQSATRTIQEMKALEKTLKRRNLELEMAIARKKKEKE 180

Query: 181 NGTTTTIRVALANPSSGINSMLAILNVLKTVGVNVKVISANFFDAEFSAQLDIDHTQMMG 240
            GTT  I VAL+NPS GINSMLA+LN LKTVGVN K I A FF+++FSAQL ID    MG
Sbjct: 181 KGTTPIINVALSNPSCGINSMLAVLNFLKTVGVNSKAIHATFFNSQFSAQLAID--THMG 240

Query: 241 AAEVERVVQLTLTEAERKFQGQCQERTKFIKQSYFNFNN 264
           AAEVER +Q+TL EAERKFQ QC+E +K IK+++FNFNN
Sbjct: 241 AAEVERALQVTLDEAERKFQRQCKEGSKEIKETHFNFNN 276

[Close]

BLAST of MS007684 vs. NCBI nr
Match: XP_023000539.1 (transcription factor bHLH92-like [Cucurbita maxima])

HSP 1 Score: 271.9 bits (694), Expect = 5.6e-69
Identity = 156/260 (60.00%), Postives = 193/260 (74.23%), Query Frame = 0


Query: 1   MDDGFPVEFWQSDAFWLD-----ADLAPVARTSAFDPYSTRTNARFGQDNNLATPAAVVG 60
           MDDGFPVEFW +D +WLD     +D AP  + SAF PY  +     GQ NN      +  
Sbjct: 1   MDDGFPVEFWHTDLYWLDTPISVSDPAP-GQISAFVPYLPQPAIGSGQKNN-----PIAA 60

Query: 61  DNSRNINKRMIEFWRKKWLEKNKAAAAGEDLEREKNYRHMLNERLRRDKQRKSYLELHSM 120
             S NI+KR+I++WRKKW EK K A  G DLEREK+++HMLNER+RR+K R+SY ELHSM
Sbjct: 61  TYSENIHKRVIKYWRKKWQEKKKPAEMG-DLEREKSHQHMLNERMRREKHRRSYSELHSM 120

Query: 121 LPKKTKNDKNSIVQMAASTIQELKTLEAILEGRNLELEMALAARKREKENGTTTTIRVAL 180
           LP KTKNDKNSIVQMAA TI+ELK  E +L+ RN+ELEMAL+A+KR++E G TT IRVA+
Sbjct: 121 LPSKTKNDKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKG-TTPIRVAV 180

Query: 181 ANPSSGINSMLAILNVLKTVGVNVKVISANFFDAEFSAQLDIDHTQMMGAAEVERVVQLT 240
           ANPSSGINSML +LN+LKTVGVN K I A F D++FS  + I+    M AAEVER +Q+T
Sbjct: 181 ANPSSGINSMLGVLNLLKTVGVNAKAIHATFLDSQFSTHIAIE--SHMRAAEVERALQMT 240

Query: 241 LTEAERKFQGQCQERTKFIK 256
           L+EAERKFQ QC+E +  +K
Sbjct: 241 LSEAERKFQRQCEEGSHDVK 250

[Close]

BLAST of MS007684 vs. NCBI nr
Match: XP_022930317.1 (transcription factor bHLH92-like [Cucurbita moschata])

HSP 1 Score: 268.5 bits (685), Expect = 6.2e-68
Identity = 153/255 (60.00%), Postives = 187/255 (73.33%), Query Frame = 0


Query: 1   MDDGFPVEFWQSDAFWLD-----ADLAPVARTSAFDPYSTRTNARFGQDNNLATPAAVVG 60
           MDDGFPVEFW +D  WLD     +D AP  + SAF PY  +      Q NN  T   ++ 
Sbjct: 1   MDDGFPVEFWHTDLHWLDPPIPVSDPAP-GQISAFVPYLPQPTIGSRQKNNPITATTIIA 60

Query: 61  DNSRNINKRMIEFWRKKWLEKNKAAAAGEDLEREKNYRHMLNERLRRDKQRKSYLELHSM 120
             S N++KR+IE+WRK+W EK K A  G DLERE+++RHMLNER+RR+K R+SY ELHSM
Sbjct: 61  TYSENVHKRVIEYWRKQWQEKKKPAEMG-DLERERSHRHMLNERMRREKHRRSYSELHSM 120

Query: 121 LPKKTKNDKNSIVQMAASTIQELKTLEAILEGRNLELEMALAARKREKENGTTTTIRVAL 180
           LP KTKNDKNSIVQMAA TI+ELK  E +L+ RN+ELEMAL+A+KR++E G TT IRVA+
Sbjct: 121 LPSKTKNDKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKG-TTPIRVAV 180

Query: 181 ANPSSGINSMLAILNVLKTVGVNVKVISANFFDAEFSAQLDIDHTQMMGAAEVERVVQLT 240
           ANPSSGINSML +LN+LKTVGVN K I A F D+ FS  + ID    M AAEVER +Q+T
Sbjct: 181 ANPSSGINSMLGVLNLLKTVGVNAKAIHATFLDSRFSTHIAID--SHMRAAEVERALQMT 240

Query: 241 LTEAERKFQGQCQER 251
           L+EAERK Q Q + R
Sbjct: 241 LSEAERKLQRQMRGR 250

[Close]

BLAST of MS007684 vs. NCBI nr
Match: KAG6593858.1 (Transcription factor basic helix-loop-helix 92, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 268.5 bits (685), Expect = 6.2e-68
Identity = 153/255 (60.00%), Postives = 187/255 (73.33%), Query Frame = 0


Query: 1   MDDGFPVEFWQSDAFWLD-----ADLAPVARTSAFDPYSTRTNARFGQDNNLATPAAVVG 60
           MDDGFPVEFW +D +WLD      D AP  + SAF PY  +      Q NN  T   +  
Sbjct: 1   MDDGFPVEFWHTDLYWLDPPIPVPDPAP-GQISAFIPYLPQPTIGSRQKNNPITATTITA 60

Query: 61  DNSRNINKRMIEFWRKKWLEKNKAAAAGEDLEREKNYRHMLNERLRRDKQRKSYLELHSM 120
             S N++KR+IE+WRK+W EK K A  G DLERE+++RHMLNER+RR+K R+SY ELHSM
Sbjct: 61  TYSENVHKRVIEYWRKQWQEKKKPAEMG-DLERERSHRHMLNERMRREKHRRSYSELHSM 120

Query: 121 LPKKTKNDKNSIVQMAASTIQELKTLEAILEGRNLELEMALAARKREKENGTTTTIRVAL 180
           LP KTKNDKNSIVQMAA TI+ELK  E +L+ RN+ELEMAL+A+KR++E G TT IRVA+
Sbjct: 121 LPSKTKNDKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKG-TTPIRVAV 180

Query: 181 ANPSSGINSMLAILNVLKTVGVNVKVISANFFDAEFSAQLDIDHTQMMGAAEVERVVQLT 240
           ANPSSGINSML +LN+LKTVGVN K I A F D+ FS  + ID    M AAEVER +Q+T
Sbjct: 181 ANPSSGINSMLGVLNLLKTVGVNAKAIHATFLDSRFSTHIAID--SHMRAAEVERELQMT 240

Query: 241 LTEAERKFQGQCQER 251
           ++EAERKFQ Q + R
Sbjct: 241 VSEAERKFQRQMRGR 250

[Close]

BLAST of MS007684 vs. ExPASy Swiss-Prot
Match: Q9FIX5 (Transcription factor bHLH92 OS=Arabidopsis thaliana OX=3702 GN=BHLH92 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 6.1e-26
Identity = 84/200 (42.00%), Postives = 117/200 (58.50%), Query Frame = 0


Query: 43  QDNNLATPAAVVGDNSRNINKRMIEFWRKKWLEKNKAAAAGEDLEREKNYRHMLNERLRR 102
           +D  L   +  +  +  N+ KRM+   RK W EK    A     E+E++ RHML ER RR
Sbjct: 43  KDTELRMMSPKISSSKVNVKKRMVNLLRKNWEEKKNTVAP----EKERSRRHMLKERTRR 102

Query: 103 DKQRKSYLELHSMLPKKTKNDKNSIVQMAASTIQELKTLEAILEGRNLELEMALAARKRE 162
           +KQ++SYL LHS+LP  TKNDKNSIV+ A   I +L+ L+  L  R   +E   A  K  
Sbjct: 103 EKQKQSYLALHSLLPFATKNDKNSIVEKAVDEIAKLQRLKKELVRRIKVIEEKSA--KDG 162

Query: 163 KENGTTTTIRVALANPSSGINSMLAILNVLKTVGVNVKVISANFFDAEFSAQLDIDHTQM 222
            +  + T +RV L  P SG++SML  L+ LK++G  +K + ANF   EFSA + I+ TQ+
Sbjct: 163 HDEMSETKVRVNLKEPLSGLDSMLEALHYLKSMGTKLKTVHANFSPQEFSATMTIE-TQI 222

Query: 223 MGAAEVERVVQLTLTEAERK 243
            G  EVE+ V+  L E E K
Sbjct: 223 RG-EEVEKRVERRLQETEWK 234

[Close]

BLAST of MS007684 vs. ExPASy Swiss-Prot
Match: Q75KV9 (Transcription factor BHLH148 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH148 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 5.7e-16
Identity = 72/239 (30.13%), Postives = 114/239 (47.70%), Query Frame = 0


Query: 22  APVARTSAFDPYSTRTNARFGQDNNLATPAAVVGDNSRNINKRMI--------------- 81
           A  AR SAF  Y    +A           A  V     NI++R++               
Sbjct: 47  AAEARQSAFQEYGGAVHA------GAPAAAGAVTTGGTNIHRRVMDVLGRMGGGGGGGEK 106

Query: 82  ----EFWRKKWLEKNKAAAAGEDLEREKNYRHMLNERLRRDKQRKSYLELHSMLPKKTKN 141
               E   ++ + + +    G D+E  + +RHM+ ER RR+K  +SY +L++M+  ++K 
Sbjct: 107 GEGEEMEEEEEVPQRRRRGQGADVESSRGFRHMMRERQRREKLSQSYADLYAMVSSRSKG 166

Query: 142 DKNSIVQMAASTIQELKTLEAILEGRNLELEMALAARKREKENGTTTTIRVALANPSSGI 201
           DKNSIVQ AA  I ELK     L+ RN EL+  +       E     T++  +  PSS I
Sbjct: 167 DKNSIVQSAAIYIHELKVARDQLQRRNEELKAQIMG---HDEQQPCVTVQFEVDEPSSSI 226

Query: 202 NSMLAILNVLKTVGVNVKVISANFFDAEFSAQLDIDHTQMMGAAEVERVVQLTLTEAER 242
           +SM+A L  LK + V  + I ++        +++++ T  + A EVE+ V+  L E ER
Sbjct: 227 DSMIAALRRLKGMSVKARGIRSSMSGNRLWTEMNVETT--IAACEVEKAVEEALKEVER 274

[Close]

BLAST of MS007684 vs. ExPASy TrEMBL
Match: A0A6J1CBV8 (transcription factor bHLH92 OS=Momordica charantia OX=3673 GN=LOC111009795 PE=4 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 1.9e-134
Identity = 255/263 (96.96%), Postives = 260/263 (98.86%), Query Frame = 0


Query: 1   MDDGFPVEFWQSDAFWLDADLAPVARTSAFDPYSTRTNARFGQDNNLATPAAVVGDNSRN 60
           MDDGFPVEFWQSDAFWLDADLAPVARTSAFDPYSTRTNARFGQDNNLAT AA+VGDNSRN
Sbjct: 1   MDDGFPVEFWQSDAFWLDADLAPVARTSAFDPYSTRTNARFGQDNNLATAAAIVGDNSRN 60

Query: 61  INKRMIEFWRKKWLEKNKAAAAGEDLEREKNYRHMLNERLRRDKQRKSYLELHSMLPKKT 120
           INKRMIEFWRKKW EKNKAAAAGEDLEREKNYRHMLNERLRR+KQRKSYLELHSMLPKKT
Sbjct: 61  INKRMIEFWRKKWHEKNKAAAAGEDLEREKNYRHMLNERLRREKQRKSYLELHSMLPKKT 120

Query: 121 KNDKNSIVQMAASTIQELKTLEAILEGRNLELEMALAARKREKENGTTTTIRVALANPSS 180
           KNDKNSIVQMAASTIQELKTLEAILE R+LELE+ALAARKREKENGTTTTIRVALANPSS
Sbjct: 121 KNDKNSIVQMAASTIQELKTLEAILERRDLELEIALAARKREKENGTTTTIRVALANPSS 180

Query: 181 GINSMLAILNVLKTVGVNVKVISANFFDAEFSAQLDIDHTQMMGAAEVERVVQLTLTEAE 240
           GINSMLAILNVLKTVGVNVKVI+ANFFDAEFSAQLDIDHTQMMGAAEVERVVQLTLTEAE
Sbjct: 181 GINSMLAILNVLKTVGVNVKVINANFFDAEFSAQLDIDHTQMMGAAEVERVVQLTLTEAE 240

Query: 241 RKFQGQCQERTKFIKQSYFNFNN 264
           RKFQGQCQERTKFIKQSYFNFNN
Sbjct: 241 RKFQGQCQERTKFIKQSYFNFNN 263

[Close]

BLAST of MS007684 vs. ExPASy TrEMBL
Match: A0A6J1KK97 (transcription factor bHLH92-like OS=Cucurbita maxima OX=3661 GN=LOC111494781 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 2.7e-69
Identity = 156/260 (60.00%), Postives = 193/260 (74.23%), Query Frame = 0


Query: 1   MDDGFPVEFWQSDAFWLD-----ADLAPVARTSAFDPYSTRTNARFGQDNNLATPAAVVG 60
           MDDGFPVEFW +D +WLD     +D AP  + SAF PY  +     GQ NN      +  
Sbjct: 1   MDDGFPVEFWHTDLYWLDTPISVSDPAP-GQISAFVPYLPQPAIGSGQKNN-----PIAA 60

Query: 61  DNSRNINKRMIEFWRKKWLEKNKAAAAGEDLEREKNYRHMLNERLRRDKQRKSYLELHSM 120
             S NI+KR+I++WRKKW EK K A  G DLEREK+++HMLNER+RR+K R+SY ELHSM
Sbjct: 61  TYSENIHKRVIKYWRKKWQEKKKPAEMG-DLEREKSHQHMLNERMRREKHRRSYSELHSM 120

Query: 121 LPKKTKNDKNSIVQMAASTIQELKTLEAILEGRNLELEMALAARKREKENGTTTTIRVAL 180
           LP KTKNDKNSIVQMAA TI+ELK  E +L+ RN+ELEMAL+A+KR++E G TT IRVA+
Sbjct: 121 LPSKTKNDKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKG-TTPIRVAV 180

Query: 181 ANPSSGINSMLAILNVLKTVGVNVKVISANFFDAEFSAQLDIDHTQMMGAAEVERVVQLT 240
           ANPSSGINSML +LN+LKTVGVN K I A F D++FS  + I+    M AAEVER +Q+T
Sbjct: 181 ANPSSGINSMLGVLNLLKTVGVNAKAIHATFLDSQFSTHIAIE--SHMRAAEVERALQMT 240

Query: 241 LTEAERKFQGQCQERTKFIK 256
           L+EAERKFQ QC+E +  +K
Sbjct: 241 LSEAERKFQRQCEEGSHDVK 250

[Close]

BLAST of MS007684 vs. ExPASy TrEMBL
Match: A0A6J1EQ49 (transcription factor bHLH92-like OS=Cucurbita moschata OX=3662 GN=LOC111436803 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 3.0e-68
Identity = 153/255 (60.00%), Postives = 187/255 (73.33%), Query Frame = 0


Query: 1   MDDGFPVEFWQSDAFWLD-----ADLAPVARTSAFDPYSTRTNARFGQDNNLATPAAVVG 60
           MDDGFPVEFW +D  WLD     +D AP  + SAF PY  +      Q NN  T   ++ 
Sbjct: 1   MDDGFPVEFWHTDLHWLDPPIPVSDPAP-GQISAFVPYLPQPTIGSRQKNNPITATTIIA 60

Query: 61  DNSRNINKRMIEFWRKKWLEKNKAAAAGEDLEREKNYRHMLNERLRRDKQRKSYLELHSM 120
             S N++KR+IE+WRK+W EK K A  G DLERE+++RHMLNER+RR+K R+SY ELHSM
Sbjct: 61  TYSENVHKRVIEYWRKQWQEKKKPAEMG-DLERERSHRHMLNERMRREKHRRSYSELHSM 120

Query: 121 LPKKTKNDKNSIVQMAASTIQELKTLEAILEGRNLELEMALAARKREKENGTTTTIRVAL 180
           LP KTKNDKNSIVQMAA TI+ELK  E +L+ RN+ELEMAL+A+KR++E G TT IRVA+
Sbjct: 121 LPSKTKNDKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKG-TTPIRVAV 180

Query: 181 ANPSSGINSMLAILNVLKTVGVNVKVISANFFDAEFSAQLDIDHTQMMGAAEVERVVQLT 240
           ANPSSGINSML +LN+LKTVGVN K I A F D+ FS  + ID    M AAEVER +Q+T
Sbjct: 181 ANPSSGINSMLGVLNLLKTVGVNAKAIHATFLDSRFSTHIAID--SHMRAAEVERALQMT 240

Query: 241 LTEAERKFQGQCQER 251
           L+EAERK Q Q + R
Sbjct: 241 LSEAERKLQRQMRGR 250

[Close]

BLAST of MS007684 vs. ExPASy TrEMBL
Match: A0A5A7UQX2 (Transcription factor bHLH92 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00150 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 1.1e-67
Identity = 160/277 (57.76%), Postives = 190/277 (68.59%), Query Frame = 0


Query: 1   MDDGFPVEFWQSDAFWLDADLA----------PVARTSAFDPY-STRTNARFGQDNN--- 60
           MDD FPVEFW +D FWLDA ++          P  + SAF PY S       GQDNN   
Sbjct: 1   MDDTFPVEFWHNDHFWLDAPISVPLSAPSSPPPATQISAFLPYLSAPPTGLLGQDNNNIA 60

Query: 61  LATPAAVVGDNSRNINKRMIEFWRKKWLEKNKAAAAGEDLEREKNYRHMLNERLRRDKQR 120
             T  A    +SRN+NKRMIE+W K W EK +   +  DLEREK +RHMLNER+RR+KQ+
Sbjct: 61  TTTTTAATSYDSRNVNKRMIEYWTKHWHEKKELPVSAGDLEREKCHRHMLNERMRREKQK 120

Query: 121 KSYLELHSMLPKKTKNDKNSIVQMAASTIQELKTLEAILEGRN--LELEMALAARKREKE 180
           +SYL LHSMLPK TKNDKNSIVQ AA TIQE+K LE  L+ RN  LE+E+A+A +K+EKE
Sbjct: 121 QSYLALHSMLPKNTKNDKNSIVQSAARTIQEMKGLEKTLKRRNSELEMEIAIAMKKKEKE 180

Query: 181 NGTTTTIRVALANPSSGINSMLAILNVLKTVGVNVKVISANFFDAEFSAQLDIDHTQMMG 240
                 I VAL N S GINSML +LNVLKTVGVN K I A FF+++FSAQL ID    MG
Sbjct: 181 K---RIINVALRNTSCGINSMLTVLNVLKTVGVNSKAIHATFFNSQFSAQLAID--THMG 240

Query: 241 AAEVERVVQLTLTEAERKFQGQCQERTKFIKQSYFNF 262
           AAEVER +Q+TL EAERKF+ Q  E +K IK +YF F
Sbjct: 241 AAEVERALQVTLNEAERKFRRQYSEGSKEIKDNYFKF 272

[Close]

BLAST of MS007684 vs. ExPASy TrEMBL
Match: A0A1S3CPU0 (transcription factor bHLH92 OS=Cucumis melo OX=3656 GN=LOC103502857 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 1.1e-67
Identity = 160/277 (57.76%), Postives = 190/277 (68.59%), Query Frame = 0


Query: 1   MDDGFPVEFWQSDAFWLDADLA----------PVARTSAFDPY-STRTNARFGQDNN--- 60
           MDD FPVEFW +D FWLDA ++          P  + SAF PY S       GQDNN   
Sbjct: 1   MDDTFPVEFWHNDHFWLDAPISVPLSAPSSPPPATQISAFLPYLSAPPTGLLGQDNNNIA 60

Query: 61  LATPAAVVGDNSRNINKRMIEFWRKKWLEKNKAAAAGEDLEREKNYRHMLNERLRRDKQR 120
             T  A    +SRN+NKRMIE+W K W EK +   +  DLEREK +RHMLNER+RR+KQ+
Sbjct: 61  TTTTTAATSYDSRNVNKRMIEYWTKHWHEKKELPVSAGDLEREKCHRHMLNERMRREKQK 120

Query: 121 KSYLELHSMLPKKTKNDKNSIVQMAASTIQELKTLEAILEGRN--LELEMALAARKREKE 180
           +SYL LHSMLPK TKNDKNSIVQ AA TIQE+K LE  L+ RN  LE+E+A+A +K+EKE
Sbjct: 121 QSYLALHSMLPKNTKNDKNSIVQSAARTIQEMKGLEKTLKRRNSELEMEIAIAMKKKEKE 180

Query: 181 NGTTTTIRVALANPSSGINSMLAILNVLKTVGVNVKVISANFFDAEFSAQLDIDHTQMMG 240
                 I VAL N S GINSML +LNVLKTVGVN K I A FF+++FSAQL ID    MG
Sbjct: 181 K---RIINVALRNTSCGINSMLTVLNVLKTVGVNSKAIHATFFNSQFSAQLAID--THMG 240

Query: 241 AAEVERVVQLTLTEAERKFQGQCQERTKFIKQSYFNF 262
           AAEVER +Q+TL EAERKF+ Q  E +K IK +YF F
Sbjct: 241 AAEVERALQVTLNEAERKFRRQYSEGSKEIKDNYFKF 272

[Close]

BLAST of MS007684 vs. TAIR 10
Match: AT5G43650.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 119.4 bits (298), Expect = 4.4e-27
Identity = 84/200 (42.00%), Postives = 117/200 (58.50%), Query Frame = 0


Query: 43  QDNNLATPAAVVGDNSRNINKRMIEFWRKKWLEKNKAAAAGEDLEREKNYRHMLNERLRR 102
           +D  L   +  +  +  N+ KRM+   RK W EK    A     E+E++ RHML ER RR
Sbjct: 43  KDTELRMMSPKISSSKVNVKKRMVNLLRKNWEEKKNTVAP----EKERSRRHMLKERTRR 102

Query: 103 DKQRKSYLELHSMLPKKTKNDKNSIVQMAASTIQELKTLEAILEGRNLELEMALAARKRE 162
           +KQ++SYL LHS+LP  TKNDKNSIV+ A   I +L+ L+  L  R   +E   A  K  
Sbjct: 103 EKQKQSYLALHSLLPFATKNDKNSIVEKAVDEIAKLQRLKKELVRRIKVIEEKSA--KDG 162

Query: 163 KENGTTTTIRVALANPSSGINSMLAILNVLKTVGVNVKVISANFFDAEFSAQLDIDHTQM 222
            +  + T +RV L  P SG++SML  L+ LK++G  +K + ANF   EFSA + I+ TQ+
Sbjct: 163 HDEMSETKVRVNLKEPLSGLDSMLEALHYLKSMGTKLKTVHANFSPQEFSATMTIE-TQI 222

Query: 223 MGAAEVERVVQLTLTEAERK 243
            G  EVE+ V+  L E E K
Sbjct: 223 RG-EEVEKRVERRLQETEWK 234

[Close]

BLAST of MS007684 vs. TAIR 10
Match: AT5G56960.1 (basic helix-loop-helix (bHLH) DNA-binding family protein )

HSP 1 Score: 43.1 bits (100), Expect = 4.0e-04
Identity = 30/73 (41.10%), Postives = 45/73 (61.64%), Query Frame = 0


Query: 93  RHMLNERLRRDKQRKSYLELHSMLPKKTKNDKNSIVQMAASTIQELKTLEAILEGRNLEL 152
           +HM++ER RR+K  +S+  L S+LP  TK DK S++ +A   +  L+   + L  RN E+
Sbjct: 289 QHMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSLQGEISKLLERNREV 348

Query: 153 EMALAARKREKEN 166
           E  LA  +RE EN
Sbjct: 349 EAKLAG-EREIEN 360

The following BLAST results are available for this feature:

BLAST of MS007684 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138697.1	3.8e-134	96.96	transcription factor bHLH92 [Momordica charantia]	[more]
XP_038875776.1	6.6e-78	60.57	transcription factor bHLH92 [Benincasa hispida]	[more]
XP_023000539.1	5.6e-69	60.00	transcription factor bHLH92-like [Cucurbita maxima]	[more]
XP_022930317.1	6.2e-68	60.00	transcription factor bHLH92-like [Cucurbita moschata]	[more]
KAG6593858.1	6.2e-68	60.00	Transcription factor basic helix-loop-helix 92, partial [Cucurbita argyrosperma ...	[more]

BLAST of MS007684 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FIX5	6.1e-26	42.00	Transcription factor bHLH92 OS=Arabidopsis thaliana OX=3702 GN=BHLH92 PE=1 SV=1	[more]
Q75KV9	5.7e-16	30.13	Transcription factor BHLH148 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH148...	[more]

BLAST of MS007684 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CBV8	1.9e-134	96.96	transcription factor bHLH92 OS=Momordica charantia OX=3673 GN=LOC111009795 PE=4 ...	[more]
A0A6J1KK97	2.7e-69	60.00	transcription factor bHLH92-like OS=Cucurbita maxima OX=3661 GN=LOC111494781 PE=...	[more]
A0A6J1EQ49	3.0e-68	60.00	transcription factor bHLH92-like OS=Cucurbita moschata OX=3662 GN=LOC111436803 P...	[more]
A0A5A7UQX2	1.1e-67	57.76	Transcription factor bHLH92 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3CPU0	1.1e-67	57.76	transcription factor bHLH92 OS=Cucumis melo OX=3656 GN=LOC103502857 PE=4 SV=1	[more]

BLAST of MS007684 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43650.1	4.4e-27	42.00	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G56960.1	4.0e-04	41.10	basic helix-loop-helix (bHLH) DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 95..144 e-value: 2.9E-4 score: 30.2
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 93..138 e-value: 2.4E-7 score: 30.7
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 89..138 score: 11.572535
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 84..147 e-value: 1.0E-7 score: 33.5
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 86..148
None	No IPR available	PANTHER	PTHR46665:SF6	TRANSCRIPTION FACTOR BHLH92	coord: 1..248
None	No IPR available	CDD	cd11393	bHLH_AtbHLH_like	coord: 94..146 e-value: 9.35478E-10 score: 51.4132
IPR044658	Transcription factor bHLH92/bHLH041-like	PANTHER	PTHR46665	TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED	coord: 1..248

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS007684.1	MS007684.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046983	protein dimerization activity