MS007562 (gene) Bitter gourd (TR) v1

Overview
NameMS007562
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionextra-large guanine nucleotide-binding protein 3-like
Locationscaffold401: 191115 .. 192141 (+)
RNA-Seq ExpressionMS007562
SyntenyMS007562
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGATGGTGGGTTCAGAAAGGCAAGAATGGAGCTGGAAGCACTGTACGAAGGGGTGCCAGACGATTCAGTGAATCTCACTTTTCGACATCTCACAGATGTTAATCTTCAACCCAACTCTTCTTTTGAGAAGAAAAGAAGCAAAATCCCAAGCGATAACGAGAGGCAGAGCACCCCACTGACCAAACTACCAAGCCTGGACTTCAACAGGGCTCTGCAAGCAGCCAGCCAACAGTCCCGCCCTGATGCCAAAATCAGGCTTCATCCCAGTGCGCACCCGAAGCCGGAGGGTGTGGATGTGGTGGACGTGGGTCGTGTGCTGGAGTACAGTGACAGAGGACTCAGTTCCATGTATGAGCATCACAGAGCCACGCCGGGGAGACGCCGCCCTGGGATTCCTCACTCCAATATCTGCACCAACTGCAGCACCTACATTTATATATTCCGACATCGTTGCCTGGTGCTCAAAATCAAATCAAATCAACTCTTCATTTCAAAGCTTAAACACAAGAGCATACAACTAATGTTTAATTTGGCAGGTGTGTGGAAGAGTCTACTGTAGGCAATGCGTGAGAATAGGGATGGGAGAGATGACGGAGGGAAGAAAGTGCATGGAGTGTTTGGGAAGAAAATTCAGCCACAGGTAACCATTTTGAAAAGCAAAAAAATTTAAAGGGATTGAAGAATCAGAATGCATAAATTTTGACATTATATGTACTGTACTATACAGATACATAGCGAAGGCAGGAGATGTGGGGTGCTTCGGTTGGAGGTACCCAAGCGCGGTGAAGCAGGCGGAGCTGAGGTGGGCGGAGAAAGGGCCTCGCCGGAAAGGAGAGAGACCACCGCAGCCGCCGAGAGGGTACAGCGGCATTACCAACTCTATGACCTCTGCAACTCCGTCGAGCCCATGGCCACCCACGCCGTCGCCCACCAGTGTGGATCTTTCCACCATTTACAGCTCTCGTTTCGCCGTTATGTCGTCCCCCCTTTCTTCGCCGGCTCACCGCCACCACATACCATTT

mRNA sequence

ATGGATGATGGTGGGTTCAGAAAGGCAAGAATGGAGCTGGAAGCACTGTACGAAGGGGTGCCAGACGATTCAGTGAATCTCACTTTTCGACATCTCACAGATGTTAATCTTCAACCCAACTCTTCTTTTGAGAAGAAAAGAAGCAAAATCCCAAGCGATAACGAGAGGCAGAGCACCCCACTGACCAAACTACCAAGCCTGGACTTCAACAGGGCTCTGCAAGCAGCCAGCCAACAGTCCCGCCCTGATGCCAAAATCAGGCTTCATCCCAGTGCGCACCCGAAGCCGGAGGGTGTGGATGTGGTGGACGTGGGTCGTGTGCTGGAGTACAGTGACAGAGGACTCAGTTCCATGTATGAGCATCACAGAGCCACGCCGGGGAGACGCCGCCCTGGGATTCCTCACTCCAATATCTGCACCAACTGCAGCACCTACATTTATATATTCCGACATCGTTGCCTGGTGTGTGGAAGAGTCTACTGTAGGCAATGCGTGAGAATAGGGATGGGAGAGATGACGGAGGGAAGAAAGTGCATGGAGTGTTTGGGAAGAAAATTCAGCCACAGATACATAGCGAAGGCAGGAGATGTGGGGTGCTTCGGTTGGAGGTACCCAAGCGCGGTGAAGCAGGCGGAGCTGAGGTGGGCGGAGAAAGGGCCTCGCCGGAAAGGAGAGAGACCACCGCAGCCGCCGAGAGGGTACAGCGGCATTACCAACTCTATGACCTCTGCAACTCCGTCGAGCCCATGGCCACCCACGCCGTCGCCCACCAGTGTGGATCTTTCCACCATTTACAGCTCTCGTTTCGCCGTTATGTCGTCCCCCCTTTCTTCGCCGGCTCACCGCCACCACATACCATTT

Coding sequence (CDS)

ATGGATGATGGTGGGTTCAGAAAGGCAAGAATGGAGCTGGAAGCACTGTACGAAGGGGTGCCAGACGATTCAGTGAATCTCACTTTTCGACATCTCACAGATGTTAATCTTCAACCCAACTCTTCTTTTGAGAAGAAAAGAAGCAAAATCCCAAGCGATAACGAGAGGCAGAGCACCCCACTGACCAAACTACCAAGCCTGGACTTCAACAGGGCTCTGCAAGCAGCCAGCCAACAGTCCCGCCCTGATGCCAAAATCAGGCTTCATCCCAGTGCGCACCCGAAGCCGGAGGGTGTGGATGTGGTGGACGTGGGTCGTGTGCTGGAGTACAGTGACAGAGGACTCAGTTCCATGTATGAGCATCACAGAGCCACGCCGGGGAGACGCCGCCCTGGGATTCCTCACTCCAATATCTGCACCAACTGCAGCACCTACATTTATATATTCCGACATCGTTGCCTGGTGTGTGGAAGAGTCTACTGTAGGCAATGCGTGAGAATAGGGATGGGAGAGATGACGGAGGGAAGAAAGTGCATGGAGTGTTTGGGAAGAAAATTCAGCCACAGATACATAGCGAAGGCAGGAGATGTGGGGTGCTTCGGTTGGAGGTACCCAAGCGCGGTGAAGCAGGCGGAGCTGAGGTGGGCGGAGAAAGGGCCTCGCCGGAAAGGAGAGAGACCACCGCAGCCGCCGAGAGGGTACAGCGGCATTACCAACTCTATGACCTCTGCAACTCCGTCGAGCCCATGGCCACCCACGCCGTCGCCCACCAGTGTGGATCTTTCCACCATTTACAGCTCTCGTTTCGCCGTTATGTCGTCCCCCCTTTCTTCGCCGGCTCACCGCCACCACATACCATTT

Protein sequence

MDDGGFRKARMELEALYEGVPDDSVNLTFRHLTDVNLQPNSSFEKKRSKIPSDNERQSTPLTKLPSLDFNRALQAASQQSRPDAKIRLHPSAHPKPEGVDVVDVGRVLEYSDRGLSSMYEHHRATPGRRRPGIPHSNICTNCSTYIYIFRHRCLVCGRVYCRQCVRIGMGEMTEGRKCMECLGRKFSHRYIAKAGDVGCFGWRYPSAVKQAELRWAEKGPRRKGERPPQPPRGYSGITNSMTSATPSSPWPPTPSPTSVDLSTIYSSRFAVMSSPLSSPAHRHHIPF
Homology
BLAST of MS007562 vs. NCBI nr
Match: XP_022158430.1 (uncharacterized protein LOC111024922 [Momordica charantia])

HSP 1 Score: 587.0 bits (1512), Expect = 8.6e-164
Identity = 284/287 (98.95%), Postives = 285/287 (99.30%), Query Frame = 0

Query: 1   MDDGGFRKARMELEALYEGVPDDSVNLTFRHLTDVNLQPNSSFEKKRSKIPSDNERQSTP 60
           MDDGGFRKARMELEALYEGVPDDSVNLTFRHLTDVNLQPNSSFEKKRSKIPSDNERQSTP
Sbjct: 1   MDDGGFRKARMELEALYEGVPDDSVNLTFRHLTDVNLQPNSSFEKKRSKIPSDNERQSTP 60

Query: 61  LTKLPSLDFNRALQAASQQSRPDAKIRLHPSAHPKPEGVDVVDVGRVLEYSDRGLSSMYE 120
           LTKLPSLDFNRALQAASQQSRPDAKIRLHPSAHPKPEGVD+VDVGRVLEYSDRGLSSMYE
Sbjct: 61  LTKLPSLDFNRALQAASQQSRPDAKIRLHPSAHPKPEGVDLVDVGRVLEYSDRGLSSMYE 120

Query: 121 HHRATPGRRRPGIPHSNICTNCSTYIYIFRHRCLVCGRVYCRQCVRIGMGEMTEGRKCME 180
           HHRATPGRRRPGIPHSNICTNCSTYIYIFRHRCLVCGRVYCRQCVRIGMGEMTEGRKCME
Sbjct: 121 HHRATPGRRRPGIPHSNICTNCSTYIYIFRHRCLVCGRVYCRQCVRIGMGEMTEGRKCME 180

Query: 181 CLGRKFSHRYIAKAGDVGCFGWRYPSAVKQAELRWAEKGPRRKGERPPQPPRGYSGITNS 240
           CLGRKFSHRYIAKAGDVGCFGWRYPSAVKQAELRWAEKGPRRKGERPPQPPRGY GITNS
Sbjct: 181 CLGRKFSHRYIAKAGDVGCFGWRYPSAVKQAELRWAEKGPRRKGERPPQPPRGYGGITNS 240

Query: 241 MTSATPSSPWPPTPSPTSVDLSTIYSSRFAVMSSPLSSPAHRHHIPF 288
           MTSATPSSPWPPT SPTSVDLSTIYSSRFAVMSSPLSSPAHRHHIPF
Sbjct: 241 MTSATPSSPWPPTLSPTSVDLSTIYSSRFAVMSSPLSSPAHRHHIPF 287

BLAST of MS007562 vs. NCBI nr
Match: XP_008457288.1 (PREDICTED: extra-large guanine nucleotide-binding protein 3-like [Cucumis melo] >KAA0059975.1 extra-large guanine nucleotide-binding protein 3-like [Cucumis melo var. makuwa] >TYJ97234.1 extra-large guanine nucleotide-binding protein 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 423.7 bits (1088), Expect = 1.3e-114
Identity = 231/326 (70.86%), Postives = 247/326 (75.77%), Query Frame = 0

Query: 1   MDDGGFRKARMELEALYEGVPDDSVNLTFRHLTDVNLQPNSSFEKKRSK----------I 60
           MDDGGFRKAR+ELEALYEGVPDDSVNLTFRHLTDVNLQPNSSFEK+R+           I
Sbjct: 1   MDDGGFRKARLELEALYEGVPDDSVNLTFRHLTDVNLQPNSSFEKRRANPSIPIPIPIPI 60

Query: 61  PSDNERQSTPLTKLPSLDFNRALQAASQQSRPDAKIRLHPSA------------------ 120
           P DNE  +TPL KLPSLDFNRALQAA+Q SRPDAKI LHPSA                  
Sbjct: 61  PGDNE--TTPLNKLPSLDFNRALQAANQHSRPDAKISLHPSAQVGGSGGPLHATAGDIQS 120

Query: 121 HPKPEGVDVVDVGRVLEYSD--------RGLSSMYEHHRATPGRRRPGIPHSNICTNCST 180
           HPK E   V  +   LEYS          G+ SMY HHRAT   RRPGIPHSNICTNC+T
Sbjct: 121 HPKSEHEHVGGLRPALEYSAAYEEASRISGIGSMYGHHRATARSRRPGIPHSNICTNCTT 180

Query: 181 YIYIFRHRCLVCGRVYCRQCVRIGMGEMTEGRKCMECLGRKFSHRYIAKAGDVGCFGWRY 240
           YIYIFRHRCLVCGRVYCRQCVRIGMGEMTEGRKC+ECLGRKFSHRYI KAGDVGCFGWRY
Sbjct: 181 YIYIFRHRCLVCGRVYCRQCVRIGMGEMTEGRKCIECLGRKFSHRYIGKAGDVGCFGWRY 240

Query: 241 PSAVKQAELRWAEKGPRRKGERPPQPPRGY-SGITNSMTSATPS-SPWPPTPSPTSVDLS 288
            SAVKQAEL+WAEKGPRRKGER     RGY  G+TNS++  +PS SPW PT S  SVD+S
Sbjct: 241 SSAVKQAELKWAEKGPRRKGERALH-SRGYGGGVTNSISMTSPSQSPWAPTTS--SVDVS 300

BLAST of MS007562 vs. NCBI nr
Match: KAE8652483.1 (hypothetical protein Csa_013867 [Cucumis sativus])

HSP 1 Score: 421.8 bits (1083), Expect = 4.8e-114
Identity = 225/324 (69.44%), Postives = 247/324 (76.23%), Query Frame = 0

Query: 1   MDDGGFRKARMELEALYEGVPDDSVNLTFRHLTDVNLQPNSSFEKKRSK--------IPS 60
           MDDGGFRKAR+ELEALYEGVPDDSVNLTFRHLTDVNLQPNSSFEK+R+         IP 
Sbjct: 1   MDDGGFRKARLELEALYEGVPDDSVNLTFRHLTDVNLQPNSSFEKRRANPSIPIPIPIPI 60

Query: 61  DNERQSTPLTKLPSLDFNRALQAASQQSRPDAKIRLHPSA------------------HP 120
             ++++TPL KLPSLDFNRALQAA+Q SRPDAKI LHPSA                  HP
Sbjct: 61  PGDKETTPLNKLPSLDFNRALQAANQHSRPDAKISLHPSAQVDGTGGPLHATAGDIQSHP 120

Query: 121 KPEGVDVVDVGRVLEYSDR--------GLSSMYEHHRATPGRRRPGIPHSNICTNCSTYI 180
           K +   V  +   LEYS          G+ SMY+HHRAT G RRPGIPHSNICTNC+TYI
Sbjct: 121 KSQHEHVGGLRPALEYSAAYEEASRIGGIGSMYDHHRATAGSRRPGIPHSNICTNCTTYI 180

Query: 181 YIFRHRCLVCGRVYCRQCVRIGMGEMTEGRKCMECLGRKFSHRYIAKAGDVGCFGWRYPS 240
           YIFRHRCLVCGRVYCRQCVRIGMGEMTEGRKC++CLGRKFSHRYI KAGDVGCF WRY S
Sbjct: 181 YIFRHRCLVCGRVYCRQCVRIGMGEMTEGRKCIQCLGRKFSHRYIGKAGDVGCFSWRYSS 240

Query: 241 AVKQAELRWAEKGPRRKGERPPQPPRGY-SGITNSMTSATPS-SPWPPTPSPTSVDLSTI 288
           AVKQAEL+WAEKGPRRKGER     RGY  G+TNS++  +PS SPW PT   TSVD+STI
Sbjct: 241 AVKQAELKWAEKGPRRKGERALH-RRGYGGGVTNSISMTSPSQSPWAPT--TTSVDVSTI 300

BLAST of MS007562 vs. NCBI nr
Match: KAG7037043.1 (hypothetical protein SDJN02_00664, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 398.7 bits (1023), Expect = 4.4e-107
Identity = 212/318 (66.67%), Postives = 235/318 (73.90%), Query Frame = 0

Query: 2   DDGGFRKARMELEALYEGVPDDSVNLTFRHLTDVNLQPNSSFEKKRSKIPSDNERQSTPL 61
           D GGFRKARMELEALYEGVPD+SVNLTFRHLTDVN+Q  ++      +IP   + QSTPL
Sbjct: 3   DGGGFRKARMELEALYEGVPDESVNLTFRHLTDVNVQSRAN---PSIQIPIPRDNQSTPL 62

Query: 62  TKLPSLDFNRALQAASQQSRPDAKIRLHPSAH--PKPEGVDVVDVGR------------- 121
           TKLPSLDFNRALQAA+Q SRPDAKI LHPSA       G  +   G              
Sbjct: 63  TKLPSLDFNRALQAANQYSRPDAKISLHPSAQVGGSSSGSPLAPAGHTQSRPTSEHEYMH 122

Query: 122 --------VLEYSD--------RGLSSMYEHHRATPGRRRPGIPHSNICTNCSTYIYIFR 181
                    LEYS          G+ SMY HHRATPGRRRPGIPHSNICTNC+TYIY+FR
Sbjct: 123 AHVGGLRPALEYSAAYEEASRISGMGSMYLHHRATPGRRRPGIPHSNICTNCTTYIYVFR 182

Query: 182 HRCLVCGRVYCRQCVRIGMGEMTEGRKCMECLGRKFSHRYIAKAGDVGCFGWRYPSAVKQ 241
           HRCLVCGRVYCRQCVRIGMGEMTEGRKC+ECLGRKFSHRYI +AGDVGCFGWRY +AVK 
Sbjct: 183 HRCLVCGRVYCRQCVRIGMGEMTEGRKCIECLGRKFSHRYIGEAGDVGCFGWRYSTAVKH 242

Query: 242 AELRWAEKGPRRKGERPPQPPRGYSGITNSMTSATPS-SPWPPTPSPTSVDLSTIYSSRF 288
           AEL+WAEKGPRR+GER P   RG  G+TNSM+  + S SPW   P+ TSVD+S +YSSRF
Sbjct: 243 AELKWAEKGPRRRGERAPL--RGCGGVTNSMSMMSASQSPW--APATTSVDISAVYSSRF 302

BLAST of MS007562 vs. NCBI nr
Match: KAG6607374.1 (hypothetical protein SDJN03_00716, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 393.3 bits (1009), Expect = 1.8e-105
Identity = 211/320 (65.94%), Postives = 234/320 (73.12%), Query Frame = 0

Query: 2   DDGGFRKARMELEALYEGVPDDSVNLTFRHLTDVNLQPNSSFEKKRSKIPSDNERQSTPL 61
           D GGFRKARMELEALYEGVPD+SVNLTFRHLTDVN+Q  ++      +IP   + QSTPL
Sbjct: 3   DGGGFRKARMELEALYEGVPDESVNLTFRHLTDVNVQSRAN---PSIQIPIPRDNQSTPL 62

Query: 62  TKLPSLDFNRALQAASQQSRPDAKIRLHPSAH--PKPEGVDVVDVGR------------- 121
           TKLPSLDFNRALQAA+Q SRPDAKI LHPSA       G  +   G              
Sbjct: 63  TKLPSLDFNRALQAANQYSRPDAKISLHPSAQVGGSSSGSPLAPAGHTQSRPTSEHEYMH 122

Query: 122 --------VLEYSD--------RGLSSMYEHHRATPGRRRPGIPHSNICTNCSTYIYIFR 181
                    LEYS          G+ SMY HHRATPGRRRPGIPHSNICTNC+TYIY+FR
Sbjct: 123 AHVGGLRPALEYSAAYEEASRISGMGSMYLHHRATPGRRRPGIPHSNICTNCTTYIYVFR 182

Query: 182 HRCLVCGRVYCRQCVRIGMGEMTEGRKCMECLGRKFSHRYIAKAGDVGCFGWRYPSAVKQ 241
           HRCLVCGRVYCRQCVRIGMGEMTEGRKC+ECLGRKFSHRYI +AGDVGCFGWRY +AVK 
Sbjct: 183 HRCLVCGRVYCRQCVRIGMGEMTEGRKCIECLGRKFSHRYIGEAGDVGCFGWRYSTAVKH 242

Query: 242 AELRWAEKGPRRKGERPPQP--PRGYSGITNSMTSATPS-SPWPPTPSPTSVDLSTIYSS 288
           AEL+WAEKGPRR+GER P      G  G+TNSM+  + S SPW   P+ TSVD+S +YSS
Sbjct: 243 AELKWAEKGPRRRGERAPLRGCGGGGGGVTNSMSMMSASQSPW--APATTSVDISAVYSS 302

BLAST of MS007562 vs. ExPASy Swiss-Prot
Match: Q9C516 (Extra-large guanine nucleotide-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=XLG3 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 4.5e-06
Identity = 32/108 (29.63%), Postives = 45/108 (41.67%), Query Frame = 0

Query: 122 HRATPGRRRPGIPHSNICTNCSTYIYIFRHRCLVCGRVYCRQCVRIGMGEMTEGRKCMEC 181
           H  T   +R      + C  C    +  +  C+VC   YC  CV   MG M EGRKC+ C
Sbjct: 159 HECTASTKRRKKKKKSECYRCGKAKWENKETCIVCDEKYCGNCVLRAMGSMPEGRKCVSC 218

Query: 182 LGRKFSHRYIAKAGDVGCFGWRYPSAVKQAELRWAEKGPRRKGERPPQ 230
           +G+       +K G       R  S ++  ++  AEK       RP Q
Sbjct: 219 IGQAIDESKRSKLGKHSRVLSRLLSPLEVKQIMKAEKECTANQLRPEQ 266

BLAST of MS007562 vs. ExPASy Swiss-Prot
Match: C6KIE6 (Extra-large guanine nucleotide-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=XLG2 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 4.2e-04
Identity = 20/43 (46.51%), Postives = 23/43 (53.49%), Query Frame = 0

Query: 153 CLVCGRVYCRQCVRIGMGEMTEGRKCMECLGRKFSHRYIAKAG 196
           C+VC   YC  CVR  MG M EGRKC  C+G +      A  G
Sbjct: 229 CIVCDAKYCFNCVRRAMGAMPEGRKCQACIGYRIDESKRASLG 271

BLAST of MS007562 vs. ExPASy TrEMBL
Match: A0A6J1DVT5 (uncharacterized protein LOC111024922 OS=Momordica charantia OX=3673 GN=LOC111024922 PE=4 SV=1)

HSP 1 Score: 587.0 bits (1512), Expect = 4.2e-164
Identity = 284/287 (98.95%), Postives = 285/287 (99.30%), Query Frame = 0

Query: 1   MDDGGFRKARMELEALYEGVPDDSVNLTFRHLTDVNLQPNSSFEKKRSKIPSDNERQSTP 60
           MDDGGFRKARMELEALYEGVPDDSVNLTFRHLTDVNLQPNSSFEKKRSKIPSDNERQSTP
Sbjct: 1   MDDGGFRKARMELEALYEGVPDDSVNLTFRHLTDVNLQPNSSFEKKRSKIPSDNERQSTP 60

Query: 61  LTKLPSLDFNRALQAASQQSRPDAKIRLHPSAHPKPEGVDVVDVGRVLEYSDRGLSSMYE 120
           LTKLPSLDFNRALQAASQQSRPDAKIRLHPSAHPKPEGVD+VDVGRVLEYSDRGLSSMYE
Sbjct: 61  LTKLPSLDFNRALQAASQQSRPDAKIRLHPSAHPKPEGVDLVDVGRVLEYSDRGLSSMYE 120

Query: 121 HHRATPGRRRPGIPHSNICTNCSTYIYIFRHRCLVCGRVYCRQCVRIGMGEMTEGRKCME 180
           HHRATPGRRRPGIPHSNICTNCSTYIYIFRHRCLVCGRVYCRQCVRIGMGEMTEGRKCME
Sbjct: 121 HHRATPGRRRPGIPHSNICTNCSTYIYIFRHRCLVCGRVYCRQCVRIGMGEMTEGRKCME 180

Query: 181 CLGRKFSHRYIAKAGDVGCFGWRYPSAVKQAELRWAEKGPRRKGERPPQPPRGYSGITNS 240
           CLGRKFSHRYIAKAGDVGCFGWRYPSAVKQAELRWAEKGPRRKGERPPQPPRGY GITNS
Sbjct: 181 CLGRKFSHRYIAKAGDVGCFGWRYPSAVKQAELRWAEKGPRRKGERPPQPPRGYGGITNS 240

Query: 241 MTSATPSSPWPPTPSPTSVDLSTIYSSRFAVMSSPLSSPAHRHHIPF 288
           MTSATPSSPWPPT SPTSVDLSTIYSSRFAVMSSPLSSPAHRHHIPF
Sbjct: 241 MTSATPSSPWPPTLSPTSVDLSTIYSSRFAVMSSPLSSPAHRHHIPF 287

BLAST of MS007562 vs. ExPASy TrEMBL
Match: A0A5A7V259 (Extra-large guanine nucleotide-binding protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00240 PE=4 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 6.1e-115
Identity = 231/326 (70.86%), Postives = 247/326 (75.77%), Query Frame = 0

Query: 1   MDDGGFRKARMELEALYEGVPDDSVNLTFRHLTDVNLQPNSSFEKKRSK----------I 60
           MDDGGFRKAR+ELEALYEGVPDDSVNLTFRHLTDVNLQPNSSFEK+R+           I
Sbjct: 1   MDDGGFRKARLELEALYEGVPDDSVNLTFRHLTDVNLQPNSSFEKRRANPSIPIPIPIPI 60

Query: 61  PSDNERQSTPLTKLPSLDFNRALQAASQQSRPDAKIRLHPSA------------------ 120
           P DNE  +TPL KLPSLDFNRALQAA+Q SRPDAKI LHPSA                  
Sbjct: 61  PGDNE--TTPLNKLPSLDFNRALQAANQHSRPDAKISLHPSAQVGGSGGPLHATAGDIQS 120

Query: 121 HPKPEGVDVVDVGRVLEYSD--------RGLSSMYEHHRATPGRRRPGIPHSNICTNCST 180
           HPK E   V  +   LEYS          G+ SMY HHRAT   RRPGIPHSNICTNC+T
Sbjct: 121 HPKSEHEHVGGLRPALEYSAAYEEASRISGIGSMYGHHRATARSRRPGIPHSNICTNCTT 180

Query: 181 YIYIFRHRCLVCGRVYCRQCVRIGMGEMTEGRKCMECLGRKFSHRYIAKAGDVGCFGWRY 240
           YIYIFRHRCLVCGRVYCRQCVRIGMGEMTEGRKC+ECLGRKFSHRYI KAGDVGCFGWRY
Sbjct: 181 YIYIFRHRCLVCGRVYCRQCVRIGMGEMTEGRKCIECLGRKFSHRYIGKAGDVGCFGWRY 240

Query: 241 PSAVKQAELRWAEKGPRRKGERPPQPPRGY-SGITNSMTSATPS-SPWPPTPSPTSVDLS 288
            SAVKQAEL+WAEKGPRRKGER     RGY  G+TNS++  +PS SPW PT S  SVD+S
Sbjct: 241 SSAVKQAELKWAEKGPRRKGERALH-SRGYGGGVTNSISMTSPSQSPWAPTTS--SVDVS 300

BLAST of MS007562 vs. ExPASy TrEMBL
Match: A0A1S3C6F3 (extra-large guanine nucleotide-binding protein 3-like OS=Cucumis melo OX=3656 GN=LOC103497015 PE=4 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 6.1e-115
Identity = 231/326 (70.86%), Postives = 247/326 (75.77%), Query Frame = 0

Query: 1   MDDGGFRKARMELEALYEGVPDDSVNLTFRHLTDVNLQPNSSFEKKRSK----------I 60
           MDDGGFRKAR+ELEALYEGVPDDSVNLTFRHLTDVNLQPNSSFEK+R+           I
Sbjct: 1   MDDGGFRKARLELEALYEGVPDDSVNLTFRHLTDVNLQPNSSFEKRRANPSIPIPIPIPI 60

Query: 61  PSDNERQSTPLTKLPSLDFNRALQAASQQSRPDAKIRLHPSA------------------ 120
           P DNE  +TPL KLPSLDFNRALQAA+Q SRPDAKI LHPSA                  
Sbjct: 61  PGDNE--TTPLNKLPSLDFNRALQAANQHSRPDAKISLHPSAQVGGSGGPLHATAGDIQS 120

Query: 121 HPKPEGVDVVDVGRVLEYSD--------RGLSSMYEHHRATPGRRRPGIPHSNICTNCST 180
           HPK E   V  +   LEYS          G+ SMY HHRAT   RRPGIPHSNICTNC+T
Sbjct: 121 HPKSEHEHVGGLRPALEYSAAYEEASRISGIGSMYGHHRATARSRRPGIPHSNICTNCTT 180

Query: 181 YIYIFRHRCLVCGRVYCRQCVRIGMGEMTEGRKCMECLGRKFSHRYIAKAGDVGCFGWRY 240
           YIYIFRHRCLVCGRVYCRQCVRIGMGEMTEGRKC+ECLGRKFSHRYI KAGDVGCFGWRY
Sbjct: 181 YIYIFRHRCLVCGRVYCRQCVRIGMGEMTEGRKCIECLGRKFSHRYIGKAGDVGCFGWRY 240

Query: 241 PSAVKQAELRWAEKGPRRKGERPPQPPRGY-SGITNSMTSATPS-SPWPPTPSPTSVDLS 288
            SAVKQAEL+WAEKGPRRKGER     RGY  G+TNS++  +PS SPW PT S  SVD+S
Sbjct: 241 SSAVKQAELKWAEKGPRRKGERALH-SRGYGGGVTNSISMTSPSQSPWAPTTS--SVDVS 300

BLAST of MS007562 vs. ExPASy TrEMBL
Match: A0A0A0LPU0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G026000 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.5e-113
Identity = 220/298 (73.83%), Postives = 240/298 (80.54%), Query Frame = 0

Query: 1   MDDGGFRKARMELEALYEGVPDDSVNLTFRHLTDVNLQPNSSFEKKRSK--------IPS 60
           MDDGGFRKAR+ELEALYEGVPDDSVNLTFRHLTDVNLQPNSSFEK+R+         IP 
Sbjct: 1   MDDGGFRKARLELEALYEGVPDDSVNLTFRHLTDVNLQPNSSFEKRRANPSIPIPIPIPI 60

Query: 61  DNERQSTPLTKLPSLDFNRALQAASQQSRPDAKIRLHPSAHPKPEGVDVVDVGRVLEYSD 120
             ++++TPL KLPSLDFNRALQAA+Q SRPDAKI LHPSA     G      G   E   
Sbjct: 61  PGDKETTPLNKLPSLDFNRALQAANQHSRPDAKISLHPSAQCGLRGGKPYHGG---ESRI 120

Query: 121 RGLSSMYEHHRATPGRRRPGIPHSNICTNCSTYIYIFRHRCLVCGRVYCRQCVRIGMGEM 180
            G+ SMY+HHRAT G RRPGIPHSNICTNC+TYIYIFRHRCLVCGRVYCRQCVRIGMGEM
Sbjct: 121 GGIGSMYDHHRATAGSRRPGIPHSNICTNCTTYIYIFRHRCLVCGRVYCRQCVRIGMGEM 180

Query: 181 TEGRKCMECLGRKFSHRYIAKAGDVGCFGWRYPSAVKQAELRWAEKGPRRKGERPPQPPR 240
           TEGRKC++CLGRKFSHRYI KAGDVGCF WRY SAVKQAEL+WAEKGPRRKGER     R
Sbjct: 181 TEGRKCIQCLGRKFSHRYIGKAGDVGCFSWRYSSAVKQAELKWAEKGPRRKGERALH-RR 240

Query: 241 GY-SGITNSMTSATPS-SPWPPTPSPTSVDLSTIYSSRFAVMS-SPLSSPAHRHHIPF 288
           GY  G+TNS++  +PS SPW PT   TSVD+STIYSSRFAVMS S   SP HRHH+PF
Sbjct: 241 GYGGGVTNSISMTSPSQSPWAPT--TTSVDVSTIYSSRFAVMSTSSPHSPVHRHHLPF 292

BLAST of MS007562 vs. ExPASy TrEMBL
Match: A0A6J1GA56 (extra-large guanine nucleotide-binding protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111452347 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 3.4e-105
Identity = 210/322 (65.22%), Postives = 234/322 (72.67%), Query Frame = 0

Query: 2   DDGGFRKARMELEALYEGVPDDSVNLTFRHLTDVNLQPNSSFEKKRSKIPSDNERQSTPL 61
           D GGFRKARMELEALYEGVPD+SVNLTFRHLTDVN+Q  ++      +IP   + QSTPL
Sbjct: 3   DGGGFRKARMELEALYEGVPDESVNLTFRHLTDVNVQSRAN---PSIQIPIPRDNQSTPL 62

Query: 62  TKLPSLDFNRALQAASQQSRPDAKIRLHPSAH--PKPEGVDVVDVGRV------------ 121
           TKLPSLDFNRALQAA+Q SRPDAKI LHPSA       G  +   G +            
Sbjct: 63  TKLPSLDFNRALQAANQYSRPDAKISLHPSAQVGGSSSGSPLAPAGHIQSRPTSEHEYMH 122

Query: 122 ---------LEYSD--------RGLSSMYEHHRATPGRRRPGIPHSNICTNCSTYIYIFR 181
                    LEYS          G+ S Y HHRATPGRRRPGIPHSNICTNC+TYIY+FR
Sbjct: 123 AHVGGLRPALEYSAAYEEASRISGMGSTYLHHRATPGRRRPGIPHSNICTNCTTYIYVFR 182

Query: 182 HRCLVCGRVYCRQCVRIGMGEMTEGRKCMECLGRKFSHRYIAKAGDVGCFGWRYPSAVKQ 241
           HRCLVCGRVYCRQCVRIGMGEMTEGRKC+ECLGRKFSHRYI +AGDVGCFGWRY +AVK 
Sbjct: 183 HRCLVCGRVYCRQCVRIGMGEMTEGRKCIECLGRKFSHRYIGEAGDVGCFGWRYSTAVKH 242

Query: 242 AELRWAEKGPRRKGERPP----QPPRGYSGITNSMTSATPS-SPWPPTPSPTSVDLSTIY 288
           AEL+WAEKGPRR+GER P        G  G+TNSM+  + S SPW   P+ TSVD+S +Y
Sbjct: 243 AELKWAEKGPRRRGERAPLRGCGGGGGGGGVTNSMSMMSASQSPW--APATTSVDISAVY 302

BLAST of MS007562 vs. TAIR 10
Match: AT1G31930.1 (extra-large GTP-binding protein 3 )

HSP 1 Score: 53.5 bits (127), Expect = 3.2e-07
Identity = 32/108 (29.63%), Postives = 45/108 (41.67%), Query Frame = 0

Query: 122 HRATPGRRRPGIPHSNICTNCSTYIYIFRHRCLVCGRVYCRQCVRIGMGEMTEGRKCMEC 181
           H  T   +R      + C  C    +  +  C+VC   YC  CV   MG M EGRKC+ C
Sbjct: 159 HECTASTKRRKKKKKSECYRCGKAKWENKETCIVCDEKYCGNCVLRAMGSMPEGRKCVSC 218

Query: 182 LGRKFSHRYIAKAGDVGCFGWRYPSAVKQAELRWAEKGPRRKGERPPQ 230
           +G+       +K G       R  S ++  ++  AEK       RP Q
Sbjct: 219 IGQAIDESKRSKLGKHSRVLSRLLSPLEVKQIMKAEKECTANQLRPEQ 266

BLAST of MS007562 vs. TAIR 10
Match: AT1G31930.2 (extra-large GTP-binding protein 3 )

HSP 1 Score: 53.5 bits (127), Expect = 3.2e-07
Identity = 32/108 (29.63%), Postives = 45/108 (41.67%), Query Frame = 0

Query: 122 HRATPGRRRPGIPHSNICTNCSTYIYIFRHRCLVCGRVYCRQCVRIGMGEMTEGRKCMEC 181
           H  T   +R      + C  C    +  +  C+VC   YC  CV   MG M EGRKC+ C
Sbjct: 159 HECTASTKRRKKKKKSECYRCGKAKWENKETCIVCDEKYCGNCVLRAMGSMPEGRKCVSC 218

Query: 182 LGRKFSHRYIAKAGDVGCFGWRYPSAVKQAELRWAEKGPRRKGERPPQ 230
           +G+       +K G       R  S ++  ++  AEK       RP Q
Sbjct: 219 IGQAIDESKRSKLGKHSRVLSRLLSPLEVKQIMKAEKECTANQLRPEQ 266

BLAST of MS007562 vs. TAIR 10
Match: AT1G31930.3 (extra-large GTP-binding protein 3 )

HSP 1 Score: 53.5 bits (127), Expect = 3.2e-07
Identity = 32/108 (29.63%), Postives = 45/108 (41.67%), Query Frame = 0

Query: 122 HRATPGRRRPGIPHSNICTNCSTYIYIFRHRCLVCGRVYCRQCVRIGMGEMTEGRKCMEC 181
           H  T   +R      + C  C    +  +  C+VC   YC  CV   MG M EGRKC+ C
Sbjct: 159 HECTASTKRRKKKKKSECYRCGKAKWENKETCIVCDEKYCGNCVLRAMGSMPEGRKCVSC 218

Query: 182 LGRKFSHRYIAKAGDVGCFGWRYPSAVKQAELRWAEKGPRRKGERPPQ 230
           +G+       +K G       R  S ++  ++  AEK       RP Q
Sbjct: 219 IGQAIDESKRSKLGKHSRVLSRLLSPLEVKQIMKAEKECTANQLRPEQ 266

BLAST of MS007562 vs. TAIR 10
Match: AT4G34390.1 (extra-large GTP-binding protein 2 )

HSP 1 Score: 47.0 bits (110), Expect = 3.0e-05
Identity = 20/43 (46.51%), Postives = 23/43 (53.49%), Query Frame = 0

Query: 153 CLVCGRVYCRQCVRIGMGEMTEGRKCMECLGRKFSHRYIAKAG 196
           C+VC   YC  CVR  MG M EGRKC  C+G +      A  G
Sbjct: 229 CIVCDAKYCFNCVRRAMGAMPEGRKCQACIGYRIDESKRASLG 271

BLAST of MS007562 vs. TAIR 10
Match: AT2G23460.1 (extra-large G-protein 1 )

HSP 1 Score: 45.4 bits (106), Expect = 8.7e-05
Identity = 18/31 (58.06%), Postives = 20/31 (64.52%), Query Frame = 0

Query: 153 CLVCGRVYCRQCVRIGMGEMTEGRKCMECLG 184
           CLVC   YC  CV   MG M EGRKC+ C+G
Sbjct: 240 CLVCDAKYCNSCVLRAMGSMPEGRKCVTCIG 270

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022158430.18.6e-16498.95uncharacterized protein LOC111024922 [Momordica charantia][more]
XP_008457288.11.3e-11470.86PREDICTED: extra-large guanine nucleotide-binding protein 3-like [Cucumis melo] ... [more]
KAE8652483.14.8e-11469.44hypothetical protein Csa_013867 [Cucumis sativus][more]
KAG7037043.14.4e-10766.67hypothetical protein SDJN02_00664, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6607374.11.8e-10565.94hypothetical protein SDJN03_00716, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Q9C5164.5e-0629.63Extra-large guanine nucleotide-binding protein 3 OS=Arabidopsis thaliana OX=3702... [more]
C6KIE64.2e-0446.51Extra-large guanine nucleotide-binding protein 2 OS=Arabidopsis thaliana OX=3702... [more]
Match NameE-valueIdentityDescription
A0A6J1DVT54.2e-16498.95uncharacterized protein LOC111024922 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A5A7V2596.1e-11570.86Extra-large guanine nucleotide-binding protein 3-like OS=Cucumis melo var. makuw... [more]
A0A1S3C6F36.1e-11570.86extra-large guanine nucleotide-binding protein 3-like OS=Cucumis melo OX=3656 GN... [more]
A0A0A0LPU01.5e-11373.83Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G026000 PE=4 SV=1[more]
A0A6J1GA563.4e-10565.22extra-large guanine nucleotide-binding protein 3-like OS=Cucurbita moschata OX=3... [more]
Match NameE-valueIdentityDescription
AT1G31930.13.2e-0729.63extra-large GTP-binding protein 3 [more]
AT1G31930.23.2e-0729.63extra-large GTP-binding protein 3 [more]
AT1G31930.33.2e-0729.63extra-large GTP-binding protein 3 [more]
AT4G34390.13.0e-0546.51extra-large GTP-binding protein 2 [more]
AT2G23460.18.7e-0558.06extra-large G-protein 1 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..257
NoneNo IPR availablePANTHERPTHR36486:SF2OS01G0977800 PROTEINcoord: 1..287
NoneNo IPR availablePANTHERPTHR36486OS01G0977800 PROTEINcoord: 1..287
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 136..182

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS007562.1MS007562.1mRNA