MS007281 (gene) Bitter gourd (TR) v1

Overview


Name	MS007281
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	TPR_REGION domain-containing protein
Location	scaffold25: 1980145 .. 1983082 (-)
RNA-Seq Expression	MS007281
Synteny	MS007281

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGAAATTTCCAGTCTCAAACCCGCCATTTCCATGCCCCGCTCGCTTCCTACGTCTTTCACCGCGCCTTCTTTGCCGAATTCCATCATTACTCATGAAGCTTTCCTCTCTCCGAACTCGCTTCCGATGAGAATTAAGCTTAATCGCATCCCGATATCGTCATTGTCTAGAAGGTTGTTCGTTCCTTCAGTCTCTGGAATCTGGGACGCCTTAACTGGGGGAAACAACCCCCGCGACGCTGTTGCTGCAATTCGGCGCGGAATGCTTCTCTTCAGGCAGGTTTGTTCTAATCAACTCGCGTAAAATTGCTTCGATTAGAATCGAGTATCGGGTTGAATTCGTGGAGTTTTTGTTGTTTTTAGGGCGATGTTTCGGGATCTTTGGCAGAATTTGATAAGGCAATTGAGTTGGATCCTCGTCAAAAGGCATGTAGGTTCCTGCAAGTTTACTATGATGTTAGTCATATGGTTCGATTATTAAAATTGATTTCATGAGCTTAATTATCAGCCAGTTTGTTTATATCAAGTTCTGAATAATAAAAAAGTGACAACATTCAAATTTGTACAGAGATATCTTGCTTTAGAGTGCAAGTTATAGGAATTAGAATAAGTGATTTATTTTTAATTCTTAGCAGTGTATATGCGTTACTTTGTTTAATCAACTCAGATTTGGTATGTTTGTTATCAGATCTTTGGCAAAGAGGGCTTTCACTGTACTACCTTGATAGGTACCAATCTGCTCCATTTCTGCTAAATTTATGATAGGAGGAAATCCAGAAGAGAAGAAGAAACGAATTTGACTAATCATCATCTCGAAATCGTTAAAGTTGAGAATCACAGTAGAATCTGCTAAGTTCATCATTAGCATGAATAAAGTTTGTTAGGTAAATTAAGATTGAGATTTTGAATAGTTGTAGTAGGAATCTCTTTTTAGATTTGAAGAGGGAGCTGAGCAGTTCCGACTAGATGTTGCCCAGAATCCAAATGACACAGAGGAGTCTATATGGTGCTTTCTTTGTGAAGCTCAATTATATGGAGTTGATGAATCAAGAAGGCGGTTTCTTGAGGTAAGTTAAAATTTGAATAACTTTCATGAAAAGTTGACGAAGTATTTATGGGAATGATTAAAGCAGTAATGAAATATTACCATGTGATTTACAAAGTGAATCAAATACATGGAAGTGTGCTAGGAGGAAAATACTGGAGAATATTATAACAGCACTTGAGTGAGTTTGAGATGATTTTTGAGGGTTTGTGTTTTTAAGCGAAAACACTTTTGGATGAAGCATAATTAAGTGCTTTCTCCACTTTTAGAATCTTCAAAATTAGTCTTGGCTATATTATCAAATACCATGAAAATTTAAAAATGTGCTTTTAGTCTGCTAAAAATACTTTTCACCATCTTGATAGCACACTCGTCATTAGGTTCAAATCCCATGATGGCCACCTACCTTATGAATTAATTCCTATGTGTTTCTCAGTATCAAATGTTGTTGGGTCAGACAGCTGTCCCCTGAAATTAGTTGAGGTGTGCATAAGTTGGCCTGGACACTCACGGATATCAAAAAAATATATATATATGTCATCCTTAATCATGTTTGGAATTTATATTGTTCAGCATGTTTAATTTACCGTTTCAAATAATGCAATTTAATCCTATATTTTAGTATTCCTAATCTATTACGTCCGGTGGTTATGGATAATGCAACATGAATGTTCTTACAACTAATATATGAATGCAGGTAGGTAGAGATTCACGACCAGTCATGCGGGAAGCTTACGACATGTTTAAAGATGGTGGTCATCCAGAGAAAGTATGGAACCTCTCTTTATTTTCCTCTATCTTCAATTCTCCTTTTCAGTCATTTTGTCATTACAAGTTTAATTGGGCTTCTTACTTTCTCAACATTTGTATGTAGATTTTCAATGCCATTGCTGAATTAACCATCTCTAAATTACCTTTTCAGTGAACTATTTTGCTGCGTGTGTTGTTTAATTTCCTAAAATATGATCTGACTGAAGAGTTGTTTTTTACTTCATAGCTTGTTGCTGCCTTCTCAAGTGGCCGTGAGAATGAATATTTTTATGCTTCTCTATATGCTGGGCTCTATCACGAATCAGAGGTTTGGTTATAAGACTTGAAACTTTTTGCTTATTTGCTAATCTATCCCTGCAAACTATTATTTTGTAATCTGTGTGAAAAATAAAATAATAGCCTGATGCAATATTCTTGTCCTTTTTTCTGGCACACATCATCTTGCAATCGAATCAAAATCATATTAGTTTCTTTTAACTGTGTTATGCTCCTGGCTTATCCCACTAATCTCTAGGGAGATTTCGCCCCCGAAAACCAGCTTCACAAGGATTTAAGTCATTAAATTATCAACTTAGAAATCTGGAAGATATCTTCAAGCATCCCAAGTCCCTGCACTAGGTACTTTCAAGATGATCAAAACTATATTTGCTGAAGTTCATCTTAGAAACCGCCATTACTGAAAATTTTAATCAAATAAAAGTTCGACTTCTTTTGGACGAGCCTGATGACACAAAAATAATCCAATCAGGAAAACACACTCTTCAATTTCAATCCCTATGATTTTTATCGATAAATCAAACTGTGTTCCATGAGGAAATGAGATGACATAGACATGAAACGTTGCAATATGTCCTCTGTAGAACAACAAGAAATGTGATTTCCTGGCATTACTTTTTCCTCTTTTACAGAAAGATCTGGATGCAGCCAAACAACATATAGTTGCAGCCTGCCAGTGTCCTTATGGACAAAGGTTTGAATCCATCAAAACATAAACTCCAAAGGAATCCATGATTCTGTATAATAAGTTCAATTAAAAGGAAATGCCTCCCTTTTCAGGTCTGATGATTACATGGCTGCTCTTGCCAAAGTTCACTGCCTCTGTCGAAACTGGAGTTTTAGT

mRNA sequence

ATGGCTGAAATTTCCAGTCTCAAACCCGCCATTTCCATGCCCCGCTCGCTTCCTACGTCTTTCACCGCGCCTTCTTTGCCGAATTCCATCATTACTCATGAAGCTTTCCTCTCTCCGAACTCGCTTCCGATGAGAATTAAGCTTAATCGCATCCCGATATCGTCATTGTCTAGAAGGTTGTTCGTTCCTTCAGTCTCTGGAATCTGGGACGCCTTAACTGGGGGAAACAACCCCCGCGACGCTGTTGCTGCAATTCGGCGCGGAATGCTTCTCTTCAGGCAGGGCGATGTTTCGGGATCTTTGGCAGAATTTGATAAGGCAATTGAGTTGGATCCTCGTCAAAAGGCATATCTTTGGCAAAGAGGGCTTTCACTGTACTACCTTGATAGATTTGAAGAGGGAGCTGAGCAGTTCCGACTAGATGTTGCCCAGAATCCAAATGACACAGAGGAGTCTATATGGTGCTTTCTTTGTGAAGCTCAATTATATGGAGTTGATGAATCAAGAAGGCGGTTTCTTGAGGTAGGTAGAGATTCACGACCAGTCATGCGGGAAGCTTACGACATGTTTAAAGATGGTGGTCATCCAGAGAAACTTGTTGCTGCCTTCTCAAGTGGCCGTGAGAATGAATATTTTTATGCTTCTCTATATGCTGGGCTCTATCACGAATCAGAGAAAGATCTGGATGCAGCCAAACAACATATAGTTGCAGCCTGCCAGTGTCCTTATGGACAAAGGTCTGATGATTACATGGCTGCTCTTGCCAAAGTTCACTGCCTCTGTCGAAACTGGAGTTTTAGT

Coding sequence (CDS)

ATGGCTGAAATTTCCAGTCTCAAACCCGCCATTTCCATGCCCCGCTCGCTTCCTACGTCTTTCACCGCGCCTTCTTTGCCGAATTCCATCATTACTCATGAAGCTTTCCTCTCTCCGAACTCGCTTCCGATGAGAATTAAGCTTAATCGCATCCCGATATCGTCATTGTCTAGAAGGTTGTTCGTTCCTTCAGTCTCTGGAATCTGGGACGCCTTAACTGGGGGAAACAACCCCCGCGACGCTGTTGCTGCAATTCGGCGCGGAATGCTTCTCTTCAGGCAGGGCGATGTTTCGGGATCTTTGGCAGAATTTGATAAGGCAATTGAGTTGGATCCTCGTCAAAAGGCATATCTTTGGCAAAGAGGGCTTTCACTGTACTACCTTGATAGATTTGAAGAGGGAGCTGAGCAGTTCCGACTAGATGTTGCCCAGAATCCAAATGACACAGAGGAGTCTATATGGTGCTTTCTTTGTGAAGCTCAATTATATGGAGTTGATGAATCAAGAAGGCGGTTTCTTGAGGTAGGTAGAGATTCACGACCAGTCATGCGGGAAGCTTACGACATGTTTAAAGATGGTGGTCATCCAGAGAAACTTGTTGCTGCCTTCTCAAGTGGCCGTGAGAATGAATATTTTTATGCTTCTCTATATGCTGGGCTCTATCACGAATCAGAGAAAGATCTGGATGCAGCCAAACAACATATAGTTGCAGCCTGCCAGTGTCCTTATGGACAAAGGTCTGATGATTACATGGCTGCTCTTGCCAAAGTTCACTGCCTCTGTCGAAACTGGAGTTTTAGT

Protein sequence

MAEISSLKPAISMPRSLPTSFTAPSLPNSIITHEAFLSPNSLPMRIKLNRIPISSLSRRLFVPSVSGIWDALTGGNNPRDAVAAIRRGMLLFRQGDVSGSLAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDESRRRFLEVGRDSRPVMREAYDMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHESEKDLDAAKQHIVAACQCPYGQRSDDYMAALAKVHCLCRNWSFS

Homology

[Close]

BLAST of MS007281 vs. NCBI nr
Match: XP_022156340.1 (uncharacterized protein LOC111023257 [Momordica charantia])

HSP 1 Score: 539.7 bits (1389), Expect = 1.5e-149
Identity = 266/267 (99.63%), Postives = 266/267 (99.63%), Query Frame = 0


Query: 1   MAEISSLKPAISMPRSLPTSFTAPSLPNSIITHEAFLSPNSLPMRIKLNRIPISSLSRRL 60
           MAEISSLKPAISMPRSLPTSFTAPSLPNSIITHEAFLSPNSLPMRIKLNRIPISSLSRRL
Sbjct: 1   MAEISSLKPAISMPRSLPTSFTAPSLPNSIITHEAFLSPNSLPMRIKLNRIPISSLSRRL 60

Query: 61  FVPSVSGIWDALTGGNNPRDAVAAIRRGMLLFRQGDVSGSLAEFDKAIELDPRQKAYLWQ 120
           FVPSVSGIWDALTGGNNPRDAVAAIRRGMLLFRQGDVSGSLAEFDKAIELDPRQKAYLWQ
Sbjct: 61  FVPSVSGIWDALTGGNNPRDAVAAIRRGMLLFRQGDVSGSLAEFDKAIELDPRQKAYLWQ 120

Query: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDESRRRFLEVGRDSR 180
           RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDESRRRFLEVGRDSR
Sbjct: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDESRRRFLEVGRDSR 180

Query: 181 PVMREAYDMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHESEKDLDAAKQHIVAACQ 240
           PVMREAYDMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHESEKDLDAAKQHIVAACQ
Sbjct: 181 PVMREAYDMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHESEKDLDAAKQHIVAACQ 240

Query: 241 CPYGQRSDDYMAALAKVHCLCRNWSFS 268
            PYGQRSDDYMAALAKVHCLCRNWSFS
Sbjct: 241 SPYGQRSDDYMAALAKVHCLCRNWSFS 267

[Close]

BLAST of MS007281 vs. NCBI nr
Match: XP_022999589.1 (uncharacterized protein LOC111493913 isoform X3 [Cucurbita maxima])

HSP 1 Score: 481.1 bits (1237), Expect = 6.2e-132
Identity = 238/265 (89.81%), Postives = 247/265 (93.21%), Query Frame = 0


Query: 1   MAEISSLKPAISMPRSLPTSFTAPSLPNSIITHEAFLSPNSLPMRIKLNRIPISSLSRRL 60
           MA ISSLKP+ISM RS   SFTAPSLPNS    E   SP+SLPMRIKLN +P  SLSRRL
Sbjct: 1   MAAISSLKPSISMSRSFHISFTAPSLPNSTKPLENLHSPSSLPMRIKLNHVPPLSLSRRL 60

Query: 61  FVPSVSGIWDALTGGNNPRDAVAAIRRGMLLFRQGDVSGSLAEFDKAIELDPRQKAYLWQ 120
           FVPSVSGIWDALTGGNNPRDAVAAIRRGMLLFR+GDVSGSLAEFDKAIELDPRQKAYLWQ
Sbjct: 61  FVPSVSGIWDALTGGNNPRDAVAAIRRGMLLFREGDVSGSLAEFDKAIELDPRQKAYLWQ 120

Query: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDESRRRFLEVGRDSR 180
           RGLSLYYLDRFEEGAEQFRLDVAQNP+DTEESIWCF+CEAQLYGVDE+RRRFLEVGRD R
Sbjct: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPSDTEESIWCFVCEAQLYGVDEARRRFLEVGRDPR 180

Query: 181 PVMREAYDMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHESEKDLDAAKQHIVAACQ 240
           PVMREAY+MFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHE+EK LDAAKQHIVAACQ
Sbjct: 181 PVMREAYNMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHEAEKKLDAAKQHIVAACQ 240

Query: 241 CPYGQRSDDYMAALAKVHCLCRNWS 266
            PYGQRSDDYMAALAKVHCLCRNWS
Sbjct: 241 SPYGQRSDDYMAALAKVHCLCRNWS 265

[Close]

BLAST of MS007281 vs. NCBI nr
Match: XP_022946000.1 (uncharacterized protein LOC111450218 isoform X1 [Cucurbita moschata])

HSP 1 Score: 476.9 bits (1226), Expect = 1.2e-130
Identity = 236/265 (89.06%), Postives = 244/265 (92.08%), Query Frame = 0


Query: 1   MAEISSLKPAISMPRSLPTSFTAPSLPNSIITHEAFLSPNSLPMRIKLNRIPISSLSRRL 60
           MA ISSLKP+ISM RS   SFTAPSLPNSI   E   SP+S PMRIKLN +P  SLSRRL
Sbjct: 1   MAAISSLKPSISMSRSFHISFTAPSLPNSIKPLENLHSPSSFPMRIKLNHVPPLSLSRRL 60

Query: 61  FVPSVSGIWDALTGGNNPRDAVAAIRRGMLLFRQGDVSGSLAEFDKAIELDPRQKAYLWQ 120
           FVPSVSGIWDALTGGNNPRDAV AIRRGMLLFR+GDVSGSLAEFDKAIELDPRQKAYLWQ
Sbjct: 61  FVPSVSGIWDALTGGNNPRDAVTAIRRGMLLFREGDVSGSLAEFDKAIELDPRQKAYLWQ 120

Query: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDESRRRFLEVGRDSR 180
           RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCF+CEAQLYGVDE+RRRFLEVGRD R
Sbjct: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFVCEAQLYGVDEARRRFLEVGRDPR 180

Query: 181 PVMREAYDMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHESEKDLDAAKQHIVAACQ 240
            VMREAY+MFKDGGHPE LVAAFSSGRENEYFYASLYAGLYHE+EK LDAAKQHIVAACQ
Sbjct: 181 SVMREAYNMFKDGGHPENLVAAFSSGRENEYFYASLYAGLYHEAEKKLDAAKQHIVAACQ 240

Query: 241 CPYGQRSDDYMAALAKVHCLCRNWS 266
            PYGQRSDDYMAALAKVHCLCRNWS
Sbjct: 241 SPYGQRSDDYMAALAKVHCLCRNWS 265

[Close]

BLAST of MS007281 vs. NCBI nr
Match: XP_023545315.1 (uncharacterized protein LOC111804759 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 476.1 bits (1224), Expect = 2.0e-130
Identity = 234/265 (88.30%), Postives = 244/265 (92.08%), Query Frame = 0


Query: 1   MAEISSLKPAISMPRSLPTSFTAPSLPNSIITHEAFLSPNSLPMRIKLNRIPISSLSRRL 60
           MA IS+LKP+ISM RS   SFTAPSLPNS    E   SP S PM+IKLN +P  SLSRRL
Sbjct: 1   MAAISNLKPSISMSRSFHISFTAPSLPNSTKPLENLHSPTSFPMKIKLNHVPPLSLSRRL 60

Query: 61  FVPSVSGIWDALTGGNNPRDAVAAIRRGMLLFRQGDVSGSLAEFDKAIELDPRQKAYLWQ 120
           FVPSVSGIWDALTGGNNPRDAV AIRRGMLLFR+GDVSGSLAEFDKAIELDPRQKAYLWQ
Sbjct: 61  FVPSVSGIWDALTGGNNPRDAVTAIRRGMLLFREGDVSGSLAEFDKAIELDPRQKAYLWQ 120

Query: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDESRRRFLEVGRDSR 180
           RGLSLYYLDRF+EGAEQFRLDVAQNPNDTEESIWCF+CEAQLYGVDE+RRRFLEVGRD R
Sbjct: 121 RGLSLYYLDRFDEGAEQFRLDVAQNPNDTEESIWCFVCEAQLYGVDEARRRFLEVGRDPR 180

Query: 181 PVMREAYDMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHESEKDLDAAKQHIVAACQ 240
           PVMREAY+MFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHE+EK LDAAKQHIVAACQ
Sbjct: 181 PVMREAYNMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHEAEKKLDAAKQHIVAACQ 240

Query: 241 CPYGQRSDDYMAALAKVHCLCRNWS 266
            PYGQRSDDYMAALAKVHCLCRNWS
Sbjct: 241 SPYGQRSDDYMAALAKVHCLCRNWS 265

[Close]

BLAST of MS007281 vs. NCBI nr
Match: XP_038889663.1 (uncharacterized protein LOC120079523 [Benincasa hispida])

HSP 1 Score: 474.6 bits (1220), Expect = 5.8e-130
Identity = 235/267 (88.01%), Postives = 244/267 (91.39%), Query Frame = 0


Query: 1   MAEISSLKPAISMPRSLPTSFTAPSLPNSIITHEAFLSPNSLPMRIKLNRIPISSLSRRL 60
           MA ISSLK +IS+  SL   F APS PNS  T E   SP+SLPMRI LN +P  SLSRRL
Sbjct: 1   MAAISSLKSSISISHSLHIPFIAPSFPNSTKTLEISHSPSSLPMRITLNHVPPLSLSRRL 60

Query: 61  FVPSVSGIWDALTGGNNPRDAVAAIRRGMLLFRQGDVSGSLAEFDKAIELDPRQKAYLWQ 120
           FVPSVSGIWDALTGGNNPRDAVAAIRRGMLLFRQGDV GSLAEFDKAIELDPRQKAYLWQ
Sbjct: 61  FVPSVSGIWDALTGGNNPRDAVAAIRRGMLLFRQGDVLGSLAEFDKAIELDPRQKAYLWQ 120

Query: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDESRRRFLEVGRDSR 180
           RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDE+RRRFLEVGRDSR
Sbjct: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDSR 180

Query: 181 PVMREAYDMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHESEKDLDAAKQHIVAACQ 240
           PVMREAY+MFKDGGHPEKL+AAFSSGRENEYFYASLYAGLYHE+EK LDAAKQHIVAACQ
Sbjct: 181 PVMREAYNMFKDGGHPEKLIAAFSSGRENEYFYASLYAGLYHEAEKKLDAAKQHIVAACQ 240

Query: 241 CPYGQRSDDYMAALAKVHCLCRNWSFS 268
            PYGQRSDDYMAAL +VHCLCRNWSFS
Sbjct: 241 SPYGQRSDDYMAALTRVHCLCRNWSFS 267

[Close]

BLAST of MS007281 vs. ExPASy Swiss-Prot
Match: Q1C3L9 (Lipoprotein NlpI OS=Yersinia pestis bv. Antiqua (strain Antiqua) OX=360102 GN=nlpI PE=3 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.5e-05
Identity = 23/75 (30.67%), Postives = 37/75 (49.33%), Query Frame = 0


Query: 88  GMLLFRQGDVSGSLAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPN 147
           G+ L + G+   +   FD  +ELDP        RG++LYY  RF    +  +     +PN
Sbjct: 103 GIYLTQAGNFDAAYEAFDSVLELDPTYNYARLNRGIALYYGGRFPLAQDDLQAFYQDDPN 162

Query: 148 DTEESIWCFLCEAQL 163
           D   S+W +L E ++
Sbjct: 163 DPFRSLWLYLVEREI 177

[Close]

BLAST of MS007281 vs. ExPASy Swiss-Prot
Match: Q7CKI5 (Lipoprotein NlpI OS=Yersinia pestis OX=632 GN=nlpI PE=3 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.5e-05
Identity = 23/75 (30.67%), Postives = 37/75 (49.33%), Query Frame = 0


Query: 88  GMLLFRQGDVSGSLAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPN 147
           G+ L + G+   +   FD  +ELDP        RG++LYY  RF    +  +     +PN
Sbjct: 103 GIYLTQAGNFDAAYEAFDSVLELDPTYNYARLNRGIALYYGGRFPLAQDDLQAFYQDDPN 162

Query: 148 DTEESIWCFLCEAQL 163
           D   S+W +L E ++
Sbjct: 163 DPFRSLWLYLVEREI 177

[Close]

BLAST of MS007281 vs. ExPASy Swiss-Prot
Match: Q1CM50 (Lipoprotein NlpI OS=Yersinia pestis bv. Antiqua (strain Nepal516) OX=377628 GN=nlpI PE=3 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.5e-05
Identity = 23/75 (30.67%), Postives = 37/75 (49.33%), Query Frame = 0


Query: 88  GMLLFRQGDVSGSLAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPN 147
           G+ L + G+   +   FD  +ELDP        RG++LYY  RF    +  +     +PN
Sbjct: 103 GIYLTQAGNFDAAYEAFDSVLELDPTYNYARLNRGIALYYGGRFPLAQDDLQAFYQDDPN 162

Query: 148 DTEESIWCFLCEAQL 163
           D   S+W +L E ++
Sbjct: 163 DPFRSLWLYLVEREI 177

[Close]

BLAST of MS007281 vs. ExPASy TrEMBL
Match: A0A6J1DQ08 (uncharacterized protein LOC111023257 OS=Momordica charantia OX=3673 GN=LOC111023257 PE=4 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 7.1e-150
Identity = 266/267 (99.63%), Postives = 266/267 (99.63%), Query Frame = 0


Query: 1   MAEISSLKPAISMPRSLPTSFTAPSLPNSIITHEAFLSPNSLPMRIKLNRIPISSLSRRL 60
           MAEISSLKPAISMPRSLPTSFTAPSLPNSIITHEAFLSPNSLPMRIKLNRIPISSLSRRL
Sbjct: 1   MAEISSLKPAISMPRSLPTSFTAPSLPNSIITHEAFLSPNSLPMRIKLNRIPISSLSRRL 60

Query: 61  FVPSVSGIWDALTGGNNPRDAVAAIRRGMLLFRQGDVSGSLAEFDKAIELDPRQKAYLWQ 120
           FVPSVSGIWDALTGGNNPRDAVAAIRRGMLLFRQGDVSGSLAEFDKAIELDPRQKAYLWQ
Sbjct: 61  FVPSVSGIWDALTGGNNPRDAVAAIRRGMLLFRQGDVSGSLAEFDKAIELDPRQKAYLWQ 120

Query: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDESRRRFLEVGRDSR 180
           RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDESRRRFLEVGRDSR
Sbjct: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDESRRRFLEVGRDSR 180

Query: 181 PVMREAYDMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHESEKDLDAAKQHIVAACQ 240
           PVMREAYDMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHESEKDLDAAKQHIVAACQ
Sbjct: 181 PVMREAYDMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHESEKDLDAAKQHIVAACQ 240

Query: 241 CPYGQRSDDYMAALAKVHCLCRNWSFS 268
            PYGQRSDDYMAALAKVHCLCRNWSFS
Sbjct: 241 SPYGQRSDDYMAALAKVHCLCRNWSFS 267

[Close]

BLAST of MS007281 vs. ExPASy TrEMBL
Match: A0A6J1KHI1 (uncharacterized protein LOC111493913 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111493913 PE=4 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 3.0e-132
Identity = 238/265 (89.81%), Postives = 247/265 (93.21%), Query Frame = 0


Query: 1   MAEISSLKPAISMPRSLPTSFTAPSLPNSIITHEAFLSPNSLPMRIKLNRIPISSLSRRL 60
           MA ISSLKP+ISM RS   SFTAPSLPNS    E   SP+SLPMRIKLN +P  SLSRRL
Sbjct: 1   MAAISSLKPSISMSRSFHISFTAPSLPNSTKPLENLHSPSSLPMRIKLNHVPPLSLSRRL 60

Query: 61  FVPSVSGIWDALTGGNNPRDAVAAIRRGMLLFRQGDVSGSLAEFDKAIELDPRQKAYLWQ 120
           FVPSVSGIWDALTGGNNPRDAVAAIRRGMLLFR+GDVSGSLAEFDKAIELDPRQKAYLWQ
Sbjct: 61  FVPSVSGIWDALTGGNNPRDAVAAIRRGMLLFREGDVSGSLAEFDKAIELDPRQKAYLWQ 120

Query: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDESRRRFLEVGRDSR 180
           RGLSLYYLDRFEEGAEQFRLDVAQNP+DTEESIWCF+CEAQLYGVDE+RRRFLEVGRD R
Sbjct: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPSDTEESIWCFVCEAQLYGVDEARRRFLEVGRDPR 180

Query: 181 PVMREAYDMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHESEKDLDAAKQHIVAACQ 240
           PVMREAY+MFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHE+EK LDAAKQHIVAACQ
Sbjct: 181 PVMREAYNMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHEAEKKLDAAKQHIVAACQ 240

Query: 241 CPYGQRSDDYMAALAKVHCLCRNWS 266
            PYGQRSDDYMAALAKVHCLCRNWS
Sbjct: 241 SPYGQRSDDYMAALAKVHCLCRNWS 265

[Close]

BLAST of MS007281 vs. ExPASy TrEMBL
Match: A0A6J1G2K4 (uncharacterized protein LOC111450218 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450218 PE=4 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 5.7e-131
Identity = 236/265 (89.06%), Postives = 244/265 (92.08%), Query Frame = 0


Query: 1   MAEISSLKPAISMPRSLPTSFTAPSLPNSIITHEAFLSPNSLPMRIKLNRIPISSLSRRL 60
           MA ISSLKP+ISM RS   SFTAPSLPNSI   E   SP+S PMRIKLN +P  SLSRRL
Sbjct: 1   MAAISSLKPSISMSRSFHISFTAPSLPNSIKPLENLHSPSSFPMRIKLNHVPPLSLSRRL 60

Query: 61  FVPSVSGIWDALTGGNNPRDAVAAIRRGMLLFRQGDVSGSLAEFDKAIELDPRQKAYLWQ 120
           FVPSVSGIWDALTGGNNPRDAV AIRRGMLLFR+GDVSGSLAEFDKAIELDPRQKAYLWQ
Sbjct: 61  FVPSVSGIWDALTGGNNPRDAVTAIRRGMLLFREGDVSGSLAEFDKAIELDPRQKAYLWQ 120

Query: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDESRRRFLEVGRDSR 180
           RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCF+CEAQLYGVDE+RRRFLEVGRD R
Sbjct: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFVCEAQLYGVDEARRRFLEVGRDPR 180

Query: 181 PVMREAYDMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHESEKDLDAAKQHIVAACQ 240
            VMREAY+MFKDGGHPE LVAAFSSGRENEYFYASLYAGLYHE+EK LDAAKQHIVAACQ
Sbjct: 181 SVMREAYNMFKDGGHPENLVAAFSSGRENEYFYASLYAGLYHEAEKKLDAAKQHIVAACQ 240

Query: 241 CPYGQRSDDYMAALAKVHCLCRNWS 266
            PYGQRSDDYMAALAKVHCLCRNWS
Sbjct: 241 SPYGQRSDDYMAALAKVHCLCRNWS 265

[Close]

BLAST of MS007281 vs. ExPASy TrEMBL
Match: A0A0A0LGH0 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G032740 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 2.6e-128
Identity = 234/267 (87.64%), Postives = 242/267 (90.64%), Query Frame = 0


Query: 1   MAEISSLKPAISMPRSLPTSFTAPSLPNSIITHEAFLSPNSLPMRIKLNRIPISSLSRRL 60
           MA  SSLK +IS+  SL  SFTAPS  NS  T E F SP+SLPMRI LN +P  SLSRRL
Sbjct: 1   MATSSSLKSSISVSHSLHKSFTAPSFTNSTKTIEVFHSPSSLPMRITLNHVPPLSLSRRL 60

Query: 61  FVPSVSGIWDALTGGNNPRDAVAAIRRGMLLFRQGDVSGSLAEFDKAIELDPRQKAYLWQ 120
           FVPSVSGIWDALTGGNNPRDAVAAIRRGMLLFRQGDV GSLAEFDKAIELDPRQKAYLWQ
Sbjct: 61  FVPSVSGIWDALTGGNNPRDAVAAIRRGMLLFRQGDVLGSLAEFDKAIELDPRQKAYLWQ 120

Query: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDESRRRFLEVGRDSR 180
           RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDE+RRRFLEVGRD R
Sbjct: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPR 180

Query: 181 PVMREAYDMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHESEKDLDAAKQHIVAACQ 240
           PVMREAY+MFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHE+EK +DAAKQ IVAACQ
Sbjct: 181 PVMREAYNMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHEAEKKVDAAKQDIVAACQ 240

Query: 241 CPYGQRSDDYMAALAKVHCLCRNWSFS 268
             Y QRSDDYMAALAKVHCLCRNWSFS
Sbjct: 241 STYAQRSDDYMAALAKVHCLCRNWSFS 267

[Close]

BLAST of MS007281 vs. ExPASy TrEMBL
Match: A0A5D3BC02 (TPR_REGION domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001400 PE=4 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 1.9e-126
Identity = 232/267 (86.89%), Postives = 241/267 (90.26%), Query Frame = 0


Query: 1   MAEISSLKPAISMPRSLPTSFTAPSLPNSIITHEAFLSPNSLPMRIKLNRIPISSLSRRL 60
           MA  S LK +IS+  SL  SFTAPS  NS  T E F SP SLP+RI LN +P  SLSRRL
Sbjct: 1   MATNSILKSSISISHSLHNSFTAPSFANSSKTIENFHSPTSLPIRITLNHVPPLSLSRRL 60

Query: 61  FVPSVSGIWDALTGGNNPRDAVAAIRRGMLLFRQGDVSGSLAEFDKAIELDPRQKAYLWQ 120
           FVPSVSGIWDALTGGNNPRDAVAAIRRGMLLFRQGDV GSLAEFDKAIELDPRQKAYLWQ
Sbjct: 61  FVPSVSGIWDALTGGNNPRDAVAAIRRGMLLFRQGDVLGSLAEFDKAIELDPRQKAYLWQ 120

Query: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDESRRRFLEVGRDSR 180
           RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDE+RRRFLEVGRD R
Sbjct: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPR 180

Query: 181 PVMREAYDMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHESEKDLDAAKQHIVAACQ 240
           PVMREAY+MFK+GGHPEKLVAAFSSGRENEYFYASLYAGLYHE+EK +DAAKQHIVAACQ
Sbjct: 181 PVMREAYNMFKNGGHPEKLVAAFSSGRENEYFYASLYAGLYHEAEKKVDAAKQHIVAACQ 240

Query: 241 CPYGQRSDDYMAALAKVHCLCRNWSFS 268
             YGQRSDDYMAALAKVHCL RNWSFS
Sbjct: 241 STYGQRSDDYMAALAKVHCLRRNWSFS 267

[Close]

BLAST of MS007281 vs. TAIR 10
Match: AT3G05625.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 360.5 bits (924), Expect = 1.1e-99
Identity = 180/261 (68.97%), Postives = 213/261 (81.61%), Query Frame = 0


Query: 7   LKPAISMPRSLPTSFTAPSLPNSIITHEAFLSPNSLPMRIKLNRIPISSLSRRLFVPSVS 66
           + P I   R++P  FTA       I+    LSP       + +R P  +LSRRLF+PSVS
Sbjct: 7   VNPIIYPSRTIPRRFTA-------ISPFKTLSP-------QFSRHPPHALSRRLFLPSVS 66

Query: 67  GIWDALTGG--NNPRDAVAAIRRGMLLFRQGDVSGSLAEFDKAIELDPRQKAYLWQRGLS 126
            IWDA+TGG  +NPR+A+AA+RRGM LFRQGDV+GS+AEFD+AI LDPRQKAYLWQRGLS
Sbjct: 67  SIWDAITGGGDSNPREAIAAVRRGMQLFRQGDVAGSVAEFDRAIILDPRQKAYLWQRGLS 126

Query: 127 LYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDESRRRFLEVGRDSRPVMR 186
           LYY+DRFEEGAEQFR+DVAQNPNDTEESIWCF+CEA+L+GVD +R +FLEVGRDSRPVMR
Sbjct: 127 LYYVDRFEEGAEQFRIDVAQNPNDTEESIWCFICEARLHGVDVARTQFLEVGRDSRPVMR 186

Query: 187 EAYDMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHESEKDLDAAKQHIVAACQCPYG 246
           EAY++FK+GG PEKLV  FSSG+ +EYFYASLYAGLY+E+E   + AK H+ AAC  PYG
Sbjct: 187 EAYNLFKNGGDPEKLVNDFSSGQASEYFYASLYAGLYYEAEGKSENAKFHLTAACGSPYG 246

Query: 247 QRSDDYMAALAKVHCLCRNWS 266
           QRSDDYMA+LAKVHCLCRNWS
Sbjct: 247 QRSDDYMASLAKVHCLCRNWS 253

The following BLAST results are available for this feature:

BLAST of MS007281 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156340.1	1.5e-149	99.63	uncharacterized protein LOC111023257 [Momordica charantia]	[more]
XP_022999589.1	6.2e-132	89.81	uncharacterized protein LOC111493913 isoform X3 [Cucurbita maxima]	[more]
XP_022946000.1	1.2e-130	89.06	uncharacterized protein LOC111450218 isoform X1 [Cucurbita moschata]	[more]
XP_023545315.1	2.0e-130	88.30	uncharacterized protein LOC111804759 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_038889663.1	5.8e-130	88.01	uncharacterized protein LOC120079523 [Benincasa hispida]	[more]

BLAST of MS007281 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1C3L9	3.5e-05	30.67	Lipoprotein NlpI OS=Yersinia pestis bv. Antiqua (strain Antiqua) OX=360102 GN=nl...	[more]
Q7CKI5	3.5e-05	30.67	Lipoprotein NlpI OS=Yersinia pestis OX=632 GN=nlpI PE=3 SV=1	[more]
Q1CM50	3.5e-05	30.67	Lipoprotein NlpI OS=Yersinia pestis bv. Antiqua (strain Nepal516) OX=377628 GN=n...	[more]

BLAST of MS007281 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DQ08	7.1e-150	99.63	uncharacterized protein LOC111023257 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1KHI1	3.0e-132	89.81	uncharacterized protein LOC111493913 isoform X3 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1G2K4	5.7e-131	89.06	uncharacterized protein LOC111450218 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A0A0LGH0	2.6e-128	87.64	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G032740 ...	[more]
A0A5D3BC02	1.9e-126	86.89	TPR_REGION domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of MS007281 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05625.1	1.1e-99	68.97	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 75..258 e-value: 2.7E-24 score: 88.2
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 77..233
None	No IPR available	PANTHER	PTHR47908	FAMILY NOT NAMED	coord: 34..266
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 81..114 score: 10.2959

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS007281.1	MS007281.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding