MS007280 (gene) Bitter gourd (TR) v1

Overview


Name	MS007280
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	CST complex subunit TEN1-like
Location	scaffold25: 1965233 .. 1966554 (-)
RNA-Seq Expression	MS007280
Synteny	MS007280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCGTCTGCAATAAAATCAGGGGCATTAGTTCCATTAAAAGATCTGAAGCCATCTTCTGAGTTCTTCAAGGATGGAGCCTCACTTAGAGTTACTGGAAAGTAAAATTTACCTATATGGAAAACCTCCTTATGCTTTCTACCACTTTTTTCATGGGCCCAAAATTTGGGCTTAAACTTGATAATGAATTGGACTTGATTAATGCATTTGTTCTCCTGTTAGGTTTTGCTATAGTTTGTCTTGAATTTCTGTCTGTTTAAAATTTGGGCAGCCTTTGATTTCCTTAGCAATGAAATGATCCAGTTACATTTTCTCCTTAGGATAGGATGTTCACTATTTTCTTAAAACTAAAAACCACCAATAAACTATTTAACTGCAGCCTATTAATAATTTCCTTGCAGATAAATTTATAATACAAAAAAAAAAACCGTAAAATTGGATTTGATATGTATCCGAGTTGATCTAAAGTAATGACCCACTATGGGTAGCATAATAAATTTGCATATCCTTCGGATTGATGTTTGTATCATTATTCAATGTTGAATTCCACTGGCTGTTTCAAGCTTATCTGATGTCGAAGGGACAAATTTCCTTGGCTATTTAAAATATTCACTTTCTAATATGCATTTTTCCAGAAACGAGATATTTAAAATCTTTAGCAAAAGCCATGTATACCTACCATTTAATCAATCTGGGTTCAACAATGAAACATAATCTGATAGTGCAACATCATATTCATCTCTCACTCGATGTGACAACAGATTATCTGTTGATGACCTTTTAATAATGGAAGATGATCTTATTGTTAAAATAGTTTCTGATGTATATGCAATAATTCTTTTAATTTATTGCTATGATGTAGATGGCTGAAATACTATAATCTTTTAAATGCTTTTCCTTTATTTTTCCTTTGACGATGAAGATAATTACCATCTGTTCTTCAAGGCAGACTAGTGGAGTATTCTGTAGAGACAGCCATGGCCGTAATCGTTGATGGAAATGTTAACTTGAAGATCGACACCCAGCATCTGAGAGAACTTAGCTTTCGCATTGGCTCTATATATCAATTTATTGGTGAACTACTTGTTCAATCAGATAATGAGGTGAAATACCATTTTATGACTCTCTTTCTCTCTCTCTCTGTCTCATGTTCACACACAAAAGTATGGACGGGCAGAGTCTTAATGGTCCTGCATTTTCAGGCAACTCTGCAGGCACGTGTAGGCAGGAATGTTGACGGCATTGACCTCAACCTTTATCATCAGTCCCTGCAGCTGTTAAGACAATTTCAGGCTGATCACTTCAACAAGAGGACAAAT

mRNA sequence

ATGGCATCGTCTGCAATAAAATCAGGGGCATTAGTTCCATTAAAAGATCTGAAGCCATCTTCTGAGTTCTTCAAGGATGGAGCCTCACTTAGAGTTACTGGAAAACTAGTGGAGTATTCTGTAGAGACAGCCATGGCCGTAATCGTTGATGGAAATGTTAACTTGAAGATCGACACCCAGCATCTGAGAGAACTTAGCTTTCGCATTGGCTCTATATATCAATTTATTGGTGAACTACTTGTTCAATCAGATAATGAGGCAACTCTGCAGGCACGTGTAGGCAGGAATGTTGACGGCATTGACCTCAACCTTTATCATCAGTCCCTGCAGCTGTTAAGACAATTTCAGGCTGATCACTTCAACAAGAGGACAAAT

Coding sequence (CDS)

ATGGCATCGTCTGCAATAAAATCAGGGGCATTAGTTCCATTAAAAGATCTGAAGCCATCTTCTGAGTTCTTCAAGGATGGAGCCTCACTTAGAGTTACTGGAAAACTAGTGGAGTATTCTGTAGAGACAGCCATGGCCGTAATCGTTGATGGAAATGTTAACTTGAAGATCGACACCCAGCATCTGAGAGAACTTAGCTTTCGCATTGGCTCTATATATCAATTTATTGGTGAACTACTTGTTCAATCAGATAATGAGGCAACTCTGCAGGCACGTGTAGGCAGGAATGTTGACGGCATTGACCTCAACCTTTATCATCAGTCCCTGCAGCTGTTAAGACAATTTCAGGCTGATCACTTCAACAAGAGGACAAAT

Protein sequence

MASSAIKSGALVPLKDLKPSSEFFKDGASLRVTGKLVEYSVETAMAVIVDGNVNLKIDTQHLRELSFRIGSIYQFIGELLVQSDNEATLQARVGRNVDGIDLNLYHQSLQLLRQFQADHFNKRTN

Homology

[Close]

BLAST of MS007280 vs. NCBI nr
Match: XP_022156372.1 (CST complex subunit TEN1 isoform X1 [Momordica charantia] >XP_022156373.1 CST complex subunit TEN1 isoform X1 [Momordica charantia])

HSP 1 Score: 243.0 bits (619), Expect = 1.3e-60
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MASSAIKSGALVPLKDLKPSSEFFKDGASLRVTGKLVEYSVETAMAVIVDGNVNLKIDTQ 60
           MASSAIKSGALVPLKDLKPSSEFFKDGASLRVTGKLVEYSVETAMAVIVDGNVNLKIDTQ
Sbjct: 1   MASSAIKSGALVPLKDLKPSSEFFKDGASLRVTGKLVEYSVETAMAVIVDGNVNLKIDTQ 60

Query: 61  HLRELSFRIGSIYQFIGELLVQSDNEATLQARVGRNVDGIDLNLYHQSLQLLRQFQADHF 120
           HLRELSFRIGSIYQFIGELLVQSDNEATLQARVGRNVDGIDLNLYHQSLQLLRQFQADHF
Sbjct: 61  HLRELSFRIGSIYQFIGELLVQSDNEATLQARVGRNVDGIDLNLYHQSLQLLRQFQADHF 120

Query: 121 NKRTN 126
           NKRTN
Sbjct: 121 NKRTN 125

[Close]

BLAST of MS007280 vs. NCBI nr
Match: XP_023536947.1 (CST complex subunit TEN1-like [Cucurbita pepo subsp. pepo] >XP_023536948.1 CST complex subunit TEN1-like [Cucurbita pepo subsp. pepo] >XP_023536949.1 CST complex subunit TEN1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 230.3 bits (586), Expect = 8.9e-57
Identity = 117/125 (93.60%), Postives = 123/125 (98.40%), Query Frame = 0


Query: 1   MASSAIKSGALVPLKDLKPSSEFFKDGASLRVTGKLVEYSVETAMAVIVDGNVNLKIDTQ 60
           MAS+AIKSGALV LKDLKPSSEFFKDGASLRVTGKLVEYSVETA+A+IVDGNV+LKIDTQ
Sbjct: 1   MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDTQ 60

Query: 61  HLRELSFRIGSIYQFIGELLVQSDNEATLQARVGRNVDGIDLNLYHQSLQLLRQFQADHF 120
           HLREL+FRIGSIYQFIGELLVQSDNEATLQARVGRNVDGIDLNLYHQSLQLL+QFQADH 
Sbjct: 61  HLRELTFRIGSIYQFIGELLVQSDNEATLQARVGRNVDGIDLNLYHQSLQLLKQFQADHL 120

Query: 121 NKRTN 126
           NKRTN
Sbjct: 121 NKRTN 125

[Close]

BLAST of MS007280 vs. NCBI nr
Match: XP_022966009.1 (CST complex subunit TEN1-like [Cucurbita maxima] >XP_022966010.1 CST complex subunit TEN1-like [Cucurbita maxima])

HSP 1 Score: 228.8 bits (582), Expect = 2.6e-56
Identity = 116/125 (92.80%), Postives = 123/125 (98.40%), Query Frame = 0


Query: 1   MASSAIKSGALVPLKDLKPSSEFFKDGASLRVTGKLVEYSVETAMAVIVDGNVNLKIDTQ 60
           MAS+AIKSGALV LKDLKPSSEFFKDGASLRVTGKLVEYSVETA+A+IVDGNV+LKIDTQ
Sbjct: 1   MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDTQ 60

Query: 61  HLRELSFRIGSIYQFIGELLVQSDNEATLQARVGRNVDGIDLNLYHQSLQLLRQFQADHF 120
           HLREL+FRIGSIYQFIGELLVQS+NEATLQARVGRNVDGIDLNLYHQSLQLL+QFQADH 
Sbjct: 61  HLRELTFRIGSIYQFIGELLVQSENEATLQARVGRNVDGIDLNLYHQSLQLLKQFQADHL 120

Query: 121 NKRTN 126
           NKRTN
Sbjct: 121 NKRTN 125

[Close]

BLAST of MS007280 vs. NCBI nr
Match: XP_022937765.1 (CST complex subunit TEN1 [Cucurbita moschata] >XP_022937766.1 CST complex subunit TEN1 [Cucurbita moschata] >KAG6586238.1 CST complex subunit TEN1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 227.3 bits (578), Expect = 7.6e-56
Identity = 115/125 (92.00%), Postives = 123/125 (98.40%), Query Frame = 0


Query: 1   MASSAIKSGALVPLKDLKPSSEFFKDGASLRVTGKLVEYSVETAMAVIVDGNVNLKIDTQ 60
           MAS+AIKSGALV LKDLKPSSEFFKDGASLRVTGKLVEYSVETA+A+IVDGNV+LKIDT+
Sbjct: 1   MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDTR 60

Query: 61  HLRELSFRIGSIYQFIGELLVQSDNEATLQARVGRNVDGIDLNLYHQSLQLLRQFQADHF 120
           HLREL+FRIGSIYQFIGELLVQS+NEATLQARVGRNVDGIDLNLYHQSLQLL+QFQADH 
Sbjct: 61  HLRELTFRIGSIYQFIGELLVQSENEATLQARVGRNVDGIDLNLYHQSLQLLKQFQADHL 120

Query: 121 NKRTN 126
           NKRTN
Sbjct: 121 NKRTN 125

[Close]

BLAST of MS007280 vs. NCBI nr
Match: XP_038889106.1 (CST complex subunit TEN1 isoform X2 [Benincasa hispida] >XP_038889107.1 CST complex subunit TEN1 isoform X2 [Benincasa hispida] >XP_038889108.1 CST complex subunit TEN1 isoform X2 [Benincasa hispida])

HSP 1 Score: 226.1 bits (575), Expect = 1.7e-55
Identity = 118/126 (93.65%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 1   MASSAIKSGALVPLKDL-KPSSEFFKDGASLRVTGKLVEYSVETAMAVIVDGNVNLKIDT 60
           MAS+AIKSGALV LKDL KPSSEFFKDGASLRVTGKLVEYSVETA+A+IVDGNVNLKIDT
Sbjct: 1   MASAAIKSGALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDT 60

Query: 61  QHLRELSFRIGSIYQFIGELLVQSDNEATLQARVGRNVDGIDLNLYHQSLQLLRQFQADH 120
           QHLRELS RIGSIYQFIGELLVQSDNEATL+ARVGRNVDGIDLNLYHQSLQLLRQFQADH
Sbjct: 61  QHLRELSIRIGSIYQFIGELLVQSDNEATLRARVGRNVDGIDLNLYHQSLQLLRQFQADH 120

Query: 121 FNKRTN 126
            NKRTN
Sbjct: 121 LNKRTN 126

[Close]

BLAST of MS007280 vs. ExPASy Swiss-Prot
Match: Q6NME7 (CST complex subunit TEN1 OS=Arabidopsis thaliana OX=3702 GN=TEN1 PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.2e-32
Identity = 73/122 (59.84%), Postives = 95/122 (77.87%), Query Frame = 0


Query: 1   MASSAIKSGALVPLKDLKPSSEFFKDGASLRVTGKLVEYSVETAMAVIVDGNVNLKIDTQ 60
           MA S I+ G  + L++L PSS F+K+G SLRVT  L  YSVETA+ VI DG  +LKI+TQ
Sbjct: 1   MAKSQIEPGVPITLQELYPSSLFYKEGVSLRVTAMLRGYSVETAIGVIEDGGRSLKINTQ 60

Query: 61  HLRELSFRIGSIYQFIGEL-LVQSDNEATLQARVGRNVDGIDLNLYHQSLQLLRQFQADH 120
           ++R++SFR+GSIYQFIGEL + Q +NEA LQAR GRNVDGID+NLY ++++LLRQF  + 
Sbjct: 61  NIRDVSFRVGSIYQFIGELHIEQPNNEAILQARTGRNVDGIDMNLYRKTIELLRQFLKEE 120

Query: 121 FN 122
            N
Sbjct: 121 DN 122

[Close]

BLAST of MS007280 vs. ExPASy TrEMBL
Match: A0A6J1DRX0 (CST complex subunit TEN1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023280 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 6.4e-61
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MASSAIKSGALVPLKDLKPSSEFFKDGASLRVTGKLVEYSVETAMAVIVDGNVNLKIDTQ 60
           MASSAIKSGALVPLKDLKPSSEFFKDGASLRVTGKLVEYSVETAMAVIVDGNVNLKIDTQ
Sbjct: 1   MASSAIKSGALVPLKDLKPSSEFFKDGASLRVTGKLVEYSVETAMAVIVDGNVNLKIDTQ 60

Query: 61  HLRELSFRIGSIYQFIGELLVQSDNEATLQARVGRNVDGIDLNLYHQSLQLLRQFQADHF 120
           HLRELSFRIGSIYQFIGELLVQSDNEATLQARVGRNVDGIDLNLYHQSLQLLRQFQADHF
Sbjct: 61  HLRELSFRIGSIYQFIGELLVQSDNEATLQARVGRNVDGIDLNLYHQSLQLLRQFQADHF 120

Query: 121 NKRTN 126
           NKRTN
Sbjct: 121 NKRTN 125

[Close]

BLAST of MS007280 vs. ExPASy TrEMBL
Match: A0A6J1HSH0 (CST complex subunit TEN1-like OS=Cucurbita maxima OX=3661 GN=LOC111465725 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.3e-56
Identity = 116/125 (92.80%), Postives = 123/125 (98.40%), Query Frame = 0


Query: 1   MASSAIKSGALVPLKDLKPSSEFFKDGASLRVTGKLVEYSVETAMAVIVDGNVNLKIDTQ 60
           MAS+AIKSGALV LKDLKPSSEFFKDGASLRVTGKLVEYSVETA+A+IVDGNV+LKIDTQ
Sbjct: 1   MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDTQ 60

Query: 61  HLRELSFRIGSIYQFIGELLVQSDNEATLQARVGRNVDGIDLNLYHQSLQLLRQFQADHF 120
           HLREL+FRIGSIYQFIGELLVQS+NEATLQARVGRNVDGIDLNLYHQSLQLL+QFQADH 
Sbjct: 61  HLRELTFRIGSIYQFIGELLVQSENEATLQARVGRNVDGIDLNLYHQSLQLLKQFQADHL 120

Query: 121 NKRTN 126
           NKRTN
Sbjct: 121 NKRTN 125

[Close]

BLAST of MS007280 vs. ExPASy TrEMBL
Match: A0A6J1FHR1 (CST complex subunit TEN1 OS=Cucurbita moschata OX=3662 GN=LOC111444067 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.7e-56
Identity = 115/125 (92.00%), Postives = 123/125 (98.40%), Query Frame = 0


Query: 1   MASSAIKSGALVPLKDLKPSSEFFKDGASLRVTGKLVEYSVETAMAVIVDGNVNLKIDTQ 60
           MAS+AIKSGALV LKDLKPSSEFFKDGASLRVTGKLVEYSVETA+A+IVDGNV+LKIDT+
Sbjct: 1   MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDTR 60

Query: 61  HLRELSFRIGSIYQFIGELLVQSDNEATLQARVGRNVDGIDLNLYHQSLQLLRQFQADHF 120
           HLREL+FRIGSIYQFIGELLVQS+NEATLQARVGRNVDGIDLNLYHQSLQLL+QFQADH 
Sbjct: 61  HLRELTFRIGSIYQFIGELLVQSENEATLQARVGRNVDGIDLNLYHQSLQLLKQFQADHL 120

Query: 121 NKRTN 126
           NKRTN
Sbjct: 121 NKRTN 125

[Close]

BLAST of MS007280 vs. ExPASy TrEMBL
Match: A0A1S3BY71 (CST complex subunit TEN1 OS=Cucumis melo OX=3656 GN=LOC103494489 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.1e-55
Identity = 118/126 (93.65%), Postives = 120/126 (95.24%), Query Frame = 0


Query: 1   MASSAIKSGALVPLKDL-KPSSEFFKDGASLRVTGKLVEYSVETAMAVIVDGNVNLKIDT 60
           MA SAIKSGALV LKDL KPSSEFFKDGASLRVTGKLVEYSVETA+A+IVDGNVNLKIDT
Sbjct: 1   MALSAIKSGALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDT 60

Query: 61  QHLRELSFRIGSIYQFIGELLVQSDNEATLQARVGRNVDGIDLNLYHQSLQLLRQFQADH 120
           QHLRELS RIGSIYQFIGELLVQSDNEA LQARVGRNVDGIDLNLYHQSLQLLRQFQADH
Sbjct: 61  QHLRELSIRIGSIYQFIGELLVQSDNEAILQARVGRNVDGIDLNLYHQSLQLLRQFQADH 120

Query: 121 FNKRTN 126
            NKRTN
Sbjct: 121 LNKRTN 126

[Close]

BLAST of MS007280 vs. ExPASy TrEMBL
Match: A0A0A0LFY0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G032760 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 3.8e-53
Identity = 115/126 (91.27%), Postives = 118/126 (93.65%), Query Frame = 0


Query: 1   MASSAIKSGALVPLKDL-KPSSEFFKDGASLRVTGKLVEYSVETAMAVIVDGNVNLKIDT 60
           MA SAIKSGALV LKDL  PSSEFFKDGASLRVTGKLVEYSVETA+A+IVDGNVNLKIDT
Sbjct: 1   MALSAIKSGALVSLKDLMHPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDT 60

Query: 61  QHLRELSFRIGSIYQFIGELLVQSDNEATLQARVGRNVDGIDLNLYHQSLQLLRQFQADH 120
           QHL ELS RIGSIYQFIGELLVQSDNEA L+ARVGRNVDGIDLNLYHQSLQLLRQFQADH
Sbjct: 61  QHLIELSIRIGSIYQFIGELLVQSDNEAILKARVGRNVDGIDLNLYHQSLQLLRQFQADH 120

Query: 121 FNKRTN 126
            NKRTN
Sbjct: 121 LNKRTN 126

[Close]

BLAST of MS007280 vs. TAIR 10
Match: AT1G56260.1 (unknown protein; Has 32 Blast hits to 32 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 140.6 bits (353), Expect = 8.7e-34
Identity = 73/122 (59.84%), Postives = 95/122 (77.87%), Query Frame = 0


Query: 1   MASSAIKSGALVPLKDLKPSSEFFKDGASLRVTGKLVEYSVETAMAVIVDGNVNLKIDTQ 60
           MA S I+ G  + L++L PSS F+K+G SLRVT  L  YSVETA+ VI DG  +LKI+TQ
Sbjct: 1   MAKSQIEPGVPITLQELYPSSLFYKEGVSLRVTAMLRGYSVETAIGVIEDGGRSLKINTQ 60

Query: 61  HLRELSFRIGSIYQFIGEL-LVQSDNEATLQARVGRNVDGIDLNLYHQSLQLLRQFQADH 120
           ++R++SFR+GSIYQFIGEL + Q +NEA LQAR GRNVDGID+NLY ++++LLRQF  + 
Sbjct: 61  NIRDVSFRVGSIYQFIGELHIEQPNNEAILQARTGRNVDGIDMNLYRKTIELLRQFLKEE 120

Query: 121 FN 122
            N
Sbjct: 121 DN 122

The following BLAST results are available for this feature:

BLAST of MS007280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156372.1	1.3e-60	100.00	CST complex subunit TEN1 isoform X1 [Momordica charantia] >XP_022156373.1 CST co...	[more]
XP_023536947.1	8.9e-57	93.60	CST complex subunit TEN1-like [Cucurbita pepo subsp. pepo] >XP_023536948.1 CST c...	[more]
XP_022966009.1	2.6e-56	92.80	CST complex subunit TEN1-like [Cucurbita maxima] >XP_022966010.1 CST complex sub...	[more]
XP_022937765.1	7.6e-56	92.00	CST complex subunit TEN1 [Cucurbita moschata] >XP_022937766.1 CST complex subuni...	[more]
XP_038889106.1	1.7e-55	93.65	CST complex subunit TEN1 isoform X2 [Benincasa hispida] >XP_038889107.1 CST comp...	[more]

BLAST of MS007280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NME7	1.2e-32	59.84	CST complex subunit TEN1 OS=Arabidopsis thaliana OX=3702 GN=TEN1 PE=1 SV=1	[more]

BLAST of MS007280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DRX0	6.4e-61	100.00	CST complex subunit TEN1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC1110232...	[more]
A0A6J1HSH0	1.3e-56	92.80	CST complex subunit TEN1-like OS=Cucurbita maxima OX=3661 GN=LOC111465725 PE=4 S...	[more]
A0A6J1FHR1	3.7e-56	92.00	CST complex subunit TEN1 OS=Cucurbita moschata OX=3662 GN=LOC111444067 PE=4 SV=1	[more]
A0A1S3BY71	3.1e-55	93.65	CST complex subunit TEN1 OS=Cucumis melo OX=3656 GN=LOC103494489 PE=4 SV=1	[more]
A0A0A0LFY0	3.8e-53	91.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G032760 PE=4 SV=1	[more]

BLAST of MS007280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G56260.1	8.7e-34	59.84	unknown protein; Has 32 Blast hits to 32 proteins in 16 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029146	CST complex subunit Ten1, animal and plant type	PFAM	PF15490	Ten1_2	coord: 6..118 e-value: 4.2E-32 score: 110.3
None	No IPR available	GENE3D	2.40.50.140		coord: 7..121 e-value: 2.8E-33 score: 116.3
None	No IPR available	PANTHER	PTHR33905	CST COMPLEX SUBUNIT TEN1	coord: 1..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS007280.1	MS007280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:1990879	CST complex
molecular_function	GO:0003697	single-stranded DNA binding