MS007260 (gene) Bitter gourd (TR) v1

Overview


Name	MS007260
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	transcription termination factor MTERF4, chloroplastic
Location	scaffold25: 1815355 .. 1816923 (+)
RNA-Seq Expression	MS007260
Synteny	MS007260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAAGACGGCATGCTGGTGTGGTAAAACCTAATTTTTCCATCATAGTACCTAAGATGCCTACTCTTAAATGTTGTAAGTTCACATTTACTACCACATCAATTTTCCAAACGCCTTCTAACCGTGATAGAAGAAGGGGTTTGATTACCCGGCTCCAATACTCTGATGGTGATAGAAGAACAGTATCCAAATCACTGCATTCAACTATTACATCAAAGCCATCCAGCACTAGAGTGGGTAGAAAAGAAGGAAGTGCTTCATCATTATACAGTCACCCTAGCTTGGTGGAGATGAAGAATGTGAGGTTGGAAAATCGTGCAAAGGTTTACGAGTTCTTATGTGGAATTGGTATTGTTCCTGATGAACTTGATGGTTTGGAGCTTCCTGTAACAGTTGATGTTATGAAGGAACGAGTTGATTTTCTTCTCAAATTGGGACTTACAATTGAAGATATAAATAACTACCCACTTGTTCTTGGCTGCAGTGTTAAGAAAAATATGATACCAGTGCTTGATTATCTTGGTAAATTGGGTGTTAGGAAATCTACTTTCACCGAGTTCTTAAGGAGGTATCCACAAGTCCTCCATGCTAGTGTTGTTGTTGACCTTGCTCCAGTAGTTAAGTATCTTCAGGGCATGGATATTAAGCCAAATGATATCCCACGCGTTCTTGAGAGATATCCAGAAGTACTGGGCTTCAAGCTTGAGGGAACCATGAGCACTTCAGTGGCATACTTGGTAGGAATTGGAGTGGCAAGAAGAGAAATTGGAGGGGTTTTGACCAAATACCCTGACATTTTAGGAATGAGGGTTGCTCGTGTAATCAAGCCTTTTGTTGAATATCTCGAAAGTTTGGGCATTCCGAGATTAGCAGTGGCTAGGTTAATAGAGAAGCGACCACACATTCTGGGTTTTGGATTAGAAAAAAAGGTCAAACCCAATATCCAAATGCTCTTGAAGTTTAATGTAAGAGAAGAATACCTTTCTTCTATAGTAGCACAGTATGCCGAGATCATAGGAATGGACCTTGAAACTAAGCTTCTAAGTCAAAGGAATTTACTGAAATCGATAATTGAATTGGATGATGATAATTTTGGCACTATTATCGAAAAGATGCCACAAATTGTTAGCCTTAGCAGTTCAGCTGTAATCAACCATGTGGATTTCTTAAAGAGTTGTGGGTTTTCCTTGGTGCAAGTAAAGAACATGGTTATAGGTTGCCCCCAATTGCTTGCTTTGAATCTTGACATAATGAAACACAGCTTCCAGTTCTTCCAAATGGAGATGGGAAGGCCTCTTGATGACTTGGTCACTTTTCCTGCATTCTTTACTTATGGTTTGGAGTCCACAATAAAGCCCAGACATAGGAAGGTTGTGCAGAAGGGAATTAGCTGCTCTCTTTCATGGCTCCTCAATTGCTCTGATGAAAAGTTTGCGGAAAGGATGACCTATGACACCATTGATATGGAGGAGATGGAAACTGCACCAACATTCGATATGAATTCTCTTATACAACCCCGGAATGATGATTCAGATTCCGACTATGAAGAGGACAGTGAAGAGGAGACT

mRNA sequence

ATGATAAGACGGCATGCTGGTGTGGTAAAACCTAATTTTTCCATCATAGTACCTAAGATGCCTACTCTTAAATGTTGTAAGTTCACATTTACTACCACATCAATTTTCCAAACGCCTTCTAACCGTGATAGAAGAAGGGGTTTGATTACCCGGCTCCAATACTCTGATGGTGATAGAAGAACAGTATCCAAATCACTGCATTCAACTATTACATCAAAGCCATCCAGCACTAGAGTGGGTAGAAAAGAAGGAAGTGCTTCATCATTATACAGTCACCCTAGCTTGGTGGAGATGAAGAATGTGAGGTTGGAAAATCGTGCAAAGGTTTACGAGTTCTTATGTGGAATTGGTATTGTTCCTGATGAACTTGATGGTTTGGAGCTTCCTGTAACAGTTGATGTTATGAAGGAACGAGTTGATTTTCTTCTCAAATTGGGACTTACAATTGAAGATATAAATAACTACCCACTTGTTCTTGGCTGCAGTGTTAAGAAAAATATGATACCAGTGCTTGATTATCTTGGTAAATTGGGTGTTAGGAAATCTACTTTCACCGAGTTCTTAAGGAGGTATCCACAAGTCCTCCATGCTAGTGTTGTTGTTGACCTTGCTCCAGTAGTTAAGTATCTTCAGGGCATGGATATTAAGCCAAATGATATCCCACGCGTTCTTGAGAGATATCCAGAAGTACTGGGCTTCAAGCTTGAGGGAACCATGAGCACTTCAGTGGCATACTTGGTAGGAATTGGAGTGGCAAGAAGAGAAATTGGAGGGGTTTTGACCAAATACCCTGACATTTTAGGAATGAGGGTTGCTCGTGTAATCAAGCCTTTTGTTGAATATCTCGAAAGTTTGGGCATTCCGAGATTAGCAGTGGCTAGGTTAATAGAGAAGCGACCACACATTCTGGGTTTTGGATTAGAAAAAAAGGTCAAACCCAATATCCAAATGCTCTTGAAGTTTAATGTAAGAGAAGAATACCTTTCTTCTATAGTAGCACAGTATGCCGAGATCATAGGAATGGACCTTGAAACTAAGCTTCTAAGTCAAAGGAATTTACTGAAATCGATAATTGAATTGGATGATGATAATTTTGGCACTATTATCGAAAAGATGCCACAAATTGTTAGCCTTAGCAGTTCAGCTGTAATCAACCATGTGGATTTCTTAAAGAGTTGTGGGTTTTCCTTGGTGCAAGTAAAGAACATGGTTATAGGTTGCCCCCAATTGCTTGCTTTGAATCTTGACATAATGAAACACAGCTTCCAGTTCTTCCAAATGGAGATGGGAAGGCCTCTTGATGACTTGGTCACTTTTCCTGCATTCTTTACTTATGGTTTGGAGTCCACAATAAAGCCCAGACATAGGAAGGTTGTGCAGAAGGGAATTAGCTGCTCTCTTTCATGGCTCCTCAATTGCTCTGATGAAAAGTTTGCGGAAAGGATGACCTATGACACCATTGATATGGAGGAGATGGAAACTGCACCAACATTCGATATGAATTCTCTTATACAACCCCGGAATGATGATTCAGATTCCGACTATGAAGAGGACAGTGAAGAGGAGACT

Coding sequence (CDS)

ATGATAAGACGGCATGCTGGTGTGGTAAAACCTAATTTTTCCATCATAGTACCTAAGATGCCTACTCTTAAATGTTGTAAGTTCACATTTACTACCACATCAATTTTCCAAACGCCTTCTAACCGTGATAGAAGAAGGGGTTTGATTACCCGGCTCCAATACTCTGATGGTGATAGAAGAACAGTATCCAAATCACTGCATTCAACTATTACATCAAAGCCATCCAGCACTAGAGTGGGTAGAAAAGAAGGAAGTGCTTCATCATTATACAGTCACCCTAGCTTGGTGGAGATGAAGAATGTGAGGTTGGAAAATCGTGCAAAGGTTTACGAGTTCTTATGTGGAATTGGTATTGTTCCTGATGAACTTGATGGTTTGGAGCTTCCTGTAACAGTTGATGTTATGAAGGAACGAGTTGATTTTCTTCTCAAATTGGGACTTACAATTGAAGATATAAATAACTACCCACTTGTTCTTGGCTGCAGTGTTAAGAAAAATATGATACCAGTGCTTGATTATCTTGGTAAATTGGGTGTTAGGAAATCTACTTTCACCGAGTTCTTAAGGAGGTATCCACAAGTCCTCCATGCTAGTGTTGTTGTTGACCTTGCTCCAGTAGTTAAGTATCTTCAGGGCATGGATATTAAGCCAAATGATATCCCACGCGTTCTTGAGAGATATCCAGAAGTACTGGGCTTCAAGCTTGAGGGAACCATGAGCACTTCAGTGGCATACTTGGTAGGAATTGGAGTGGCAAGAAGAGAAATTGGAGGGGTTTTGACCAAATACCCTGACATTTTAGGAATGAGGGTTGCTCGTGTAATCAAGCCTTTTGTTGAATATCTCGAAAGTTTGGGCATTCCGAGATTAGCAGTGGCTAGGTTAATAGAGAAGCGACCACACATTCTGGGTTTTGGATTAGAAAAAAAGGTCAAACCCAATATCCAAATGCTCTTGAAGTTTAATGTAAGAGAAGAATACCTTTCTTCTATAGTAGCACAGTATGCCGAGATCATAGGAATGGACCTTGAAACTAAGCTTCTAAGTCAAAGGAATTTACTGAAATCGATAATTGAATTGGATGATGATAATTTTGGCACTATTATCGAAAAGATGCCACAAATTGTTAGCCTTAGCAGTTCAGCTGTAATCAACCATGTGGATTTCTTAAAGAGTTGTGGGTTTTCCTTGGTGCAAGTAAAGAACATGGTTATAGGTTGCCCCCAATTGCTTGCTTTGAATCTTGACATAATGAAACACAGCTTCCAGTTCTTCCAAATGGAGATGGGAAGGCCTCTTGATGACTTGGTCACTTTTCCTGCATTCTTTACTTATGGTTTGGAGTCCACAATAAAGCCCAGACATAGGAAGGTTGTGCAGAAGGGAATTAGCTGCTCTCTTTCATGGCTCCTCAATTGCTCTGATGAAAAGTTTGCGGAAAGGATGACCTATGACACCATTGATATGGAGGAGATGGAAACTGCACCAACATTCGATATGAATTCTCTTATACAACCCCGGAATGATGATTCAGATTCCGACTATGAAGAGGACAGTGAAGAGGAGACT

Protein sequence

MIRRHAGVVKPNFSIIVPKMPTLKCCKFTFTTTSIFQTPSNRDRRRGLITRLQYSDGDRRTVSKSLHSTITSKPSSTRVGRKEGSASSLYSHPSLVEMKNVRLENRAKVYEFLCGIGIVPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLRRYPQVLHASVVVDLAPVVKYLQGMDIKPNDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPDILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRPHILGFGLEKKVKPNIQMLLKFNVREEYLSSIVAQYAEIIGMDLETKLLSQRNLLKSIIELDDDNFGTIIEKMPQIVSLSSSAVINHVDFLKSCGFSLVQVKNMVIGCPQLLALNLDIMKHSFQFFQMEMGRPLDDLVTFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFAERMTYDTIDMEEMETAPTFDMNSLIQPRNDDSDSDYEEDSEEET

Homology

[Close]

BLAST of MS007260 vs. NCBI nr
Match: XP_022156431.1 (transcription termination factor MTERF4, chloroplastic [Momordica charantia])

HSP 1 Score: 1015.0 bits (2623), Expect = 2.3e-292
Identity = 519/523 (99.24%), Postives = 521/523 (99.62%), Query Frame = 0


Query: 1   MIRRHAGVVKPNFSIIVPKMPTLKCCKFTFTTTSIFQTPSNRDRRRGLITRLQYSDGDRR 60
           MIRRHAGVVKPNFSIIVPKMPTLKCCKFTFTTTSIFQTPSNRDRRRGLITRLQYSDGDRR
Sbjct: 2   MIRRHAGVVKPNFSIIVPKMPTLKCCKFTFTTTSIFQTPSNRDRRRGLITRLQYSDGDRR 61

Query: 61  TVSKSLHSTITSKPSSTRVGRKEGSASSLYSHPSLVEMKNVRLENRAKVYEFLCGIGIVP 120
           TVSKSLHSTITSKPSSTRVGRKEGSASSLYSHPSLVEMKNVRLENRAKVYEFLCGIGIVP
Sbjct: 62  TVSKSLHSTITSKPSSTRVGRKEGSASSLYSHPSLVEMKNVRLENRAKVYEFLCGIGIVP 121

Query: 121 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 180
           DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR
Sbjct: 122 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 181

Query: 181 KSTFTEFLRRYPQVLHASVVVDLAPVVKYLQGMDIKPNDIPRVLERYPEVLGFKLEGTMS 240
           KSTFTEFLRRYPQVLHASVVVDLAPVVKYLQGMDIKPNDIP VLERYPEVLGFKLEGTMS
Sbjct: 182 KSTFTEFLRRYPQVLHASVVVDLAPVVKYLQGMDIKPNDIPHVLERYPEVLGFKLEGTMS 241

Query: 241 TSVAYLVGIGVARREIGGVLTKYPDILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 300
           TSVAYLVGIGVAR+EIGGVLTKYPDILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP
Sbjct: 242 TSVAYLVGIGVARKEIGGVLTKYPDILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 301

Query: 301 HILGFGLEKKVKPNIQMLLKFNVREEYLSSIVAQYAEIIGMDLETKLLSQRNLLKSIIEL 360
           HILGFGLEKKVKPNIQMLLKFNVREEYLSSIVAQYAEIIGMDLETKLLSQRNLLKSIIEL
Sbjct: 302 HILGFGLEKKVKPNIQMLLKFNVREEYLSSIVAQYAEIIGMDLETKLLSQRNLLKSIIEL 361

Query: 361 DDDNFGTIIEKMPQIVSLSSSAVINHVDFLKSCGFSLVQVKNMVIGCPQLLALNLDIMKH 420
           DDDNFGTII KMPQIVSLSSSAVINHVDFLKSCGFSLVQVKNMVIGCPQLLALNLDIMKH
Sbjct: 362 DDDNFGTIIGKMPQIVSLSSSAVINHVDFLKSCGFSLVQVKNMVIGCPQLLALNLDIMKH 421

Query: 421 SFQFFQMEMGRPLDDLVTFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFAE 480
           SFQFFQMEMGRPLDDLVTFPAFFTYGLESTIKPRHRKVVQKGI+CSLSWLLNCSDEKFAE
Sbjct: 422 SFQFFQMEMGRPLDDLVTFPAFFTYGLESTIKPRHRKVVQKGITCSLSWLLNCSDEKFAE 481

Query: 481 RMTYDTIDMEEMETAPTFDMNSLIQPRNDDSDSDYEEDSEEET 524
           RMTYDTIDMEEMETAPTFDMNSLIQPRNDDSDSDYEEDSEEET
Sbjct: 482 RMTYDTIDMEEMETAPTFDMNSLIQPRNDDSDSDYEEDSEEET 524

[Close]

BLAST of MS007260 vs. NCBI nr
Match: XP_023538106.1 (transcription termination factor MTERF4, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023538107.1 transcription termination factor MTERF4, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 928.7 bits (2399), Expect = 2.2e-266
Identity = 476/523 (91.01%), Postives = 498/523 (95.22%), Query Frame = 0


Query: 1   MIRRHAGVVKPNFSIIVPKMPTLKCCKFTFTTTSIFQTPSNRDRRRGLITRLQYSDGDRR 60
           MIR H GVVKPNFSI++ +MPTLKC KF F TTS FQT  N ++RRGLIT+LQYS GDRR
Sbjct: 2   MIRGHTGVVKPNFSIMLLEMPTLKCQKFKFITTSTFQTSPNHEKRRGLITKLQYSRGDRR 61

Query: 61  TVSKSLHSTITSKPSSTRVGRKEGSASSLYSHPSLVEMKNVRLENRAKVYEFLCGIGIVP 120
           TVSKSLHSTITSKP S++V RKEGSASSLYS PSLVEMKNVR ENRAKVYEFL GIGIVP
Sbjct: 62  TVSKSLHSTITSKPYSSKVSRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIVP 121

Query: 121 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 180
           DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNM+PVLDYLGKLGVR
Sbjct: 122 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVR 181

Query: 181 KSTFTEFLRRYPQVLHASVVVDLAPVVKYLQGMDIKPNDIPRVLERYPEVLGFKLEGTMS 240
           KSTFTEFLRRYPQVLH+SVVVDL PVVKYLQGMDIKP+DIPRVLERYPEVLGFKLEGTMS
Sbjct: 182 KSTFTEFLRRYPQVLHSSVVVDLGPVVKYLQGMDIKPSDIPRVLERYPEVLGFKLEGTMS 241

Query: 241 TSVAYLVGIGVARREIGGVLTKYPDILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 300
           TSVAYLVGIGVARREIGGVLTKYP+ILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP
Sbjct: 242 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 301

Query: 301 HILGFGLEKKVKPNIQMLLKFNVREEYLSSIVAQYAEIIGMDLETKLLSQRNLLKSIIEL 360
           HILGFGLEK+VKPNIQ+LL+FNVRE YLSSIVAQYAEIIGMDLETKL SQRNLLKSIIEL
Sbjct: 302 HILGFGLEKRVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL 361

Query: 361 DDDNFGTIIEKMPQIVSLSSSAVINHVDFLKSCGFSLVQVKNMVIGCPQLLALNLDIMKH 420
           D+DNFGTIIEKMPQ+VSLSSSAV +HVDFLKSCGFSL QVKNMVIGCPQLLALNLDIMKH
Sbjct: 362 DNDNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMKH 421

Query: 421 SFQFFQMEMGRPLDDLVTFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFAE 480
           SFQFFQ EMGRPLDDLV FPAFFTYGLESTIKPRHRKVVQKG++CSLSWLLNCSDEKFAE
Sbjct: 422 SFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFAE 481

Query: 481 RMTYDTIDMEEMETAPTFDMNSLIQPRNDDSDSDYEEDSEEET 524
           RMTYDTIDMEEMETAPTFDM+SL QPR D+SDSDYEEDSEEET
Sbjct: 482 RMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEET 524

[Close]

BLAST of MS007260 vs. NCBI nr
Match: KAG7021053.1 (Transcription termination factor MTERF4, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 926.0 bits (2392), Expect = 1.4e-265
Identity = 474/523 (90.63%), Postives = 499/523 (95.41%), Query Frame = 0


Query: 1   MIRRHAGVVKPNFSIIVPKMPTLKCCKFTFTTTSIFQTPSNRDRRRGLITRLQYSDGDRR 60
           MIR H GV+KPNFSI++ +MPTLKC KF F TTS FQT  N ++RRGLIT+LQYS GDRR
Sbjct: 15  MIRGHTGVLKPNFSIMLLEMPTLKCHKFKFGTTSTFQTSPNHEKRRGLITKLQYSRGDRR 74

Query: 61  TVSKSLHSTITSKPSSTRVGRKEGSASSLYSHPSLVEMKNVRLENRAKVYEFLCGIGIVP 120
           TVSKSLHSTITSKP S++VGRKEGSASSLYS PSLVEMKNVR ENRAKVYEFL GIGIVP
Sbjct: 75  TVSKSLHSTITSKPYSSKVGRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIVP 134

Query: 121 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 180
           DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNM+PVLDYLGKLGVR
Sbjct: 135 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVR 194

Query: 181 KSTFTEFLRRYPQVLHASVVVDLAPVVKYLQGMDIKPNDIPRVLERYPEVLGFKLEGTMS 240
           KSTFTEFLRRYPQVLH+SVVVDL PVVKYLQGMDIKP+DIPRVLERYPEVLGFKLEGTMS
Sbjct: 195 KSTFTEFLRRYPQVLHSSVVVDLGPVVKYLQGMDIKPSDIPRVLERYPEVLGFKLEGTMS 254

Query: 241 TSVAYLVGIGVARREIGGVLTKYPDILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 300
           TSVAYLVGIGVARREIGGVLTKYP+ILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP
Sbjct: 255 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 314

Query: 301 HILGFGLEKKVKPNIQMLLKFNVREEYLSSIVAQYAEIIGMDLETKLLSQRNLLKSIIEL 360
           HILGFGLEK+VKPNIQ+LL+FNVRE YLSSIVAQYAEIIGMDLETKL SQRNLLKSIIEL
Sbjct: 315 HILGFGLEKRVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL 374

Query: 361 DDDNFGTIIEKMPQIVSLSSSAVINHVDFLKSCGFSLVQVKNMVIGCPQLLALNLDIMKH 420
           D++NFGTIIEKMPQ+VSLSSSAV +HVDFLKSCGFSL QVKNMVIGCPQLLALNLDIMKH
Sbjct: 375 DNNNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMKH 434

Query: 421 SFQFFQMEMGRPLDDLVTFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFAE 480
           SFQFF+ EMGRPLDDLV FPAFFTYGLESTIKPRHRKVVQKG++CSLSWLLNCSDEKFAE
Sbjct: 435 SFQFFRKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFAE 494

Query: 481 RMTYDTIDMEEMETAPTFDMNSLIQPRNDDSDSDYEEDSEEET 524
           RMTYDTIDMEEMETAPTFDM+SL QPR D+SDSDYEEDSEEET
Sbjct: 495 RMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEET 537

[Close]

BLAST of MS007260 vs. NCBI nr
Match: KAG6586221.1 (Transcription termination factor MTERF4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 925.2 bits (2390), Expect = 2.4e-265
Identity = 474/523 (90.63%), Postives = 499/523 (95.41%), Query Frame = 0


Query: 1   MIRRHAGVVKPNFSIIVPKMPTLKCCKFTFTTTSIFQTPSNRDRRRGLITRLQYSDGDRR 60
           MIR H GV+KPNFSI++ +MPTLKC KF F TTS FQT  N ++RRGLIT+LQYS GDRR
Sbjct: 2   MIRGHTGVLKPNFSIMLLEMPTLKCHKFKFGTTSTFQTSPNHEKRRGLITKLQYSRGDRR 61

Query: 61  TVSKSLHSTITSKPSSTRVGRKEGSASSLYSHPSLVEMKNVRLENRAKVYEFLCGIGIVP 120
           TVSKSLHSTITSKP S++VGRKEGSASSLYS PSLVEMKNVR ENRAKVYEFL GIGIVP
Sbjct: 62  TVSKSLHSTITSKPYSSKVGRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIVP 121

Query: 121 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 180
           DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNM+PVLDYLGKLGVR
Sbjct: 122 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVR 181

Query: 181 KSTFTEFLRRYPQVLHASVVVDLAPVVKYLQGMDIKPNDIPRVLERYPEVLGFKLEGTMS 240
           KSTFTEFLRRYPQVLH+SVVVDL PVVKYLQGMDIKP+DIPRVLERYPEVLGFKLEGTMS
Sbjct: 182 KSTFTEFLRRYPQVLHSSVVVDLGPVVKYLQGMDIKPSDIPRVLERYPEVLGFKLEGTMS 241

Query: 241 TSVAYLVGIGVARREIGGVLTKYPDILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 300
           TSVAYLVGIGVARREIGGVLTKYP+ILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP
Sbjct: 242 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 301

Query: 301 HILGFGLEKKVKPNIQMLLKFNVREEYLSSIVAQYAEIIGMDLETKLLSQRNLLKSIIEL 360
           HILGFGLEK+VKPNIQ+LL+FNVRE YLSSIVAQYAEIIGMDLETKL SQRNLLKSIIEL
Sbjct: 302 HILGFGLEKRVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL 361

Query: 361 DDDNFGTIIEKMPQIVSLSSSAVINHVDFLKSCGFSLVQVKNMVIGCPQLLALNLDIMKH 420
           D++NFGTIIEKMPQ+VSLSSSAV +HVDFLKSCGFSL QVKNMVIGCPQLLALNLDIMKH
Sbjct: 362 DNNNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMKH 421

Query: 421 SFQFFQMEMGRPLDDLVTFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFAE 480
           SFQFF+ EMGRPLDDLV FPAFFTYGLESTIKPRHRKVVQKG++CSLSWLLNCSDEKFAE
Sbjct: 422 SFQFFRKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGMTCSLSWLLNCSDEKFAE 481

Query: 481 RMTYDTIDMEEMETAPTFDMNSLIQPRNDDSDSDYEEDSEEET 524
           RMTYDTIDMEEMETAPTFDM+SL QPR D+SDSDYEEDSEEET
Sbjct: 482 RMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEET 524

[Close]

BLAST of MS007260 vs. NCBI nr
Match: XP_022938209.1 (transcription termination factor MTERF4, chloroplastic [Cucurbita moschata] >XP_022938210.1 transcription termination factor MTERF4, chloroplastic [Cucurbita moschata] >XP_022938211.1 transcription termination factor MTERF4, chloroplastic [Cucurbita moschata])

HSP 1 Score: 924.9 bits (2389), Expect = 3.2e-265
Identity = 475/523 (90.82%), Postives = 497/523 (95.03%), Query Frame = 0


Query: 1   MIRRHAGVVKPNFSIIVPKMPTLKCCKFTFTTTSIFQTPSNRDRRRGLITRLQYSDGDRR 60
           MIR H GVVKPNFSI++ +MPTLKC KF F TTS FQT  N ++RRGLIT+LQYS GD R
Sbjct: 2   MIRGHTGVVKPNFSIMLLEMPTLKCHKFKFDTTSTFQTSPNHEKRRGLITKLQYSRGDWR 61

Query: 61  TVSKSLHSTITSKPSSTRVGRKEGSASSLYSHPSLVEMKNVRLENRAKVYEFLCGIGIVP 120
           TVSKSLHSTITSKP S++VGRKEGSASSLYS PSLVEMKNVR ENRAKVYEFL GIGIVP
Sbjct: 62  TVSKSLHSTITSKPYSSKVGRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIVP 121

Query: 121 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 180
           DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNM+PVLDYLGKLGVR
Sbjct: 122 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVR 181

Query: 181 KSTFTEFLRRYPQVLHASVVVDLAPVVKYLQGMDIKPNDIPRVLERYPEVLGFKLEGTMS 240
           KSTFTEFLRRYPQVLH+SVVVDL PVVKYLQGMDIKP+DIPRVLERYPEVLGFKLEGTMS
Sbjct: 182 KSTFTEFLRRYPQVLHSSVVVDLGPVVKYLQGMDIKPSDIPRVLERYPEVLGFKLEGTMS 241

Query: 241 TSVAYLVGIGVARREIGGVLTKYPDILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 300
           TSVAYLVGIGVARREIGGVLTKYP+ILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP
Sbjct: 242 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 301

Query: 301 HILGFGLEKKVKPNIQMLLKFNVREEYLSSIVAQYAEIIGMDLETKLLSQRNLLKSIIEL 360
           HILGFGLEK+VKPNIQ+LL+FNVRE YLSSIVAQYAEIIGMDLETKL SQRNLLKSIIEL
Sbjct: 302 HILGFGLEKRVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL 361

Query: 361 DDDNFGTIIEKMPQIVSLSSSAVINHVDFLKSCGFSLVQVKNMVIGCPQLLALNLDIMKH 420
           D+DNFGTIIEKMPQ+VSLSSSAV +HVD LKSCGFSL QVKNMVIGCPQLLALNLDIMKH
Sbjct: 362 DNDNFGTIIEKMPQVVSLSSSAVNSHVDCLKSCGFSLQQVKNMVIGCPQLLALNLDIMKH 421

Query: 421 SFQFFQMEMGRPLDDLVTFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFAE 480
           SFQFFQ EMGRPLDDLV FPAFFTYGLESTIKPRHRKVVQKG++CSLSWLLNCSDEKFAE
Sbjct: 422 SFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFAE 481

Query: 481 RMTYDTIDMEEMETAPTFDMNSLIQPRNDDSDSDYEEDSEEET 524
           RMTYDTIDMEEMETAPTFDM+SL QPR D+SDSDYEEDSEEET
Sbjct: 482 RMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEET 524

[Close]

BLAST of MS007260 vs. ExPASy Swiss-Prot
Match: Q9ZT96 (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 672.5 bits (1734), Expect = 3.7e-192
Identity = 354/534 (66.29%), Postives = 425/534 (79.59%), Query Frame = 0


Query: 2   IRRHAGVVKPNFSIIVPKMPTLKCCKFTFTTTSIFQTPSNRDRR--RGLITRLQYSDGDR 61
           IR   G  KP F ++  + P+    +    + S +    N  +R   G+   +Q +  +R
Sbjct: 3   IRFCNGFTKPGFLLVHFEPPSFFAVRSRSLSDSTYGNLCNHKKRPGTGIGLTVQCAIANR 62

Query: 62  RTVSKSLHS--TITSKPSSTRVGR-------KEGSASSLYSHPSLVEMKNVRLENRAKVY 121
           R  S+SL S     S  SS+  GR       K   + SLYS PSL++M   +  NRAKVY
Sbjct: 63  RFSSRSLDSPRRERSSRSSSSSGRDRDRDKDKGRDSKSLYSRPSLLDMNKEKAANRAKVY 122

Query: 122 EFLCGIGIVPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPV 181
           EFL GIGIVPDELDGLELPVT DVMKERV+FL KLGLTIEDINNYPLVLGCSVKKNM+PV
Sbjct: 123 EFLRGIGIVPDELDGLELPVTADVMKERVEFLHKLGLTIEDINNYPLVLGCSVKKNMVPV 182

Query: 182 LDYLGKLGVRKSTFTEFLRRYPQVLHASVVVDLAPVVKYLQGMDIKPNDIPRVLERYPEV 241
           LDYLGKLGVRKSTFTEFLRRYPQVLH+SVV+DLAPVVKYLQG+DIKP+D+PRVLERYPEV
Sbjct: 183 LDYLGKLGVRKSTFTEFLRRYPQVLHSSVVIDLAPVVKYLQGLDIKPSDVPRVLERYPEV 242

Query: 242 LGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPDILGMRVARVIKPFVEYLESLGIPRL 301
           LGFKLEGTMSTSVAYLVGIGVARREIGG+LT+YP+ILGMRVAR+IKP VEYLE LGIPRL
Sbjct: 243 LGFKLEGTMSTSVAYLVGIGVARREIGGILTRYPEILGMRVARIIKPLVEYLEVLGIPRL 302

Query: 302 AVARLIEKRPHILGFGLEKKVKPNIQMLLKFNVREEYLSSIVAQYAEIIGMDLETKLLSQ 361
           A ARLIEKRPHILGF L+  VKPN+Q+L  FNVRE  L SI+AQY EIIG+DL+ KL +Q
Sbjct: 303 AAARLIEKRPHILGFELDDTVKPNVQILQDFNVRETSLPSIIAQYPEIIGIDLKPKLDTQ 362

Query: 362 RNLLKSIIELDDDNFGTIIEKMPQIVSLSSSAVINHVDFLKSCGFSLVQVKNMVIGCPQL 421
           R LL S I L+ ++ G++IE+MPQ VSLS S ++ H+DFL  CGFS+ Q + MVIGCPQ+
Sbjct: 363 RKLLCSAIHLNPEDLGSLIERMPQFVSLSESPMLKHIDFLTKCGFSIDQTREMVIGCPQV 422

Query: 422 LALNLDIMKHSFQFFQMEMGRPLDDLVTFPAFFTYGLESTIKPRHRKVVQKGISCSLSWL 481
           LALNL IMK SF++FQ EM RPL DLV FPAFFTYGLEST+KPRH+K+++KGI CSL+W+
Sbjct: 423 LALNLGIMKLSFEYFQKEMKRPLQDLVDFPAFFTYGLESTVKPRHKKIIKKGIKCSLAWM 482

Query: 482 LNCSDEKFAERMTYDTIDMEEMETAP-TFDMNSLIQP-RNDDSDSDYEEDSEEE 523
           LNCSDEKF +RM+YDTID+EE+ET P +FDMN+L+QP R ++SDS+YEE+ +++
Sbjct: 483 LNCSDEKFEQRMSYDTIDIEEVETDPSSFDMNTLMQPEREEESDSEYEEEEDDD 536

[Close]

BLAST of MS007260 vs. ExPASy Swiss-Prot
Match: Q6AUK6 (Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0404000 PE=2 SV=1)

HSP 1 Score: 568.5 bits (1464), Expect = 7.6e-161
Identity = 286/470 (60.85%), Postives = 364/470 (77.45%), Query Frame = 0


Query: 68  STITSKPSSTRVGRKEGSA-------------SSLYSHPSLVEMKNVRLENRAKVYEFLC 127
           S  TS  S  R G   G A             SSLY+ PSL++M+  R   RA V  FL 
Sbjct: 32  SASTSASSPPRAGCSRGPAHARPRPSPRPSPSSSLYARPSLLDMERGRAARRADVDAFLA 91

Query: 128 GIGIVPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYL 187
            +G+ P EL GLELP TVDVM+ERV+FL  L L+ ED+  YPL LGCSV+KNM+PVLDYL
Sbjct: 92  SLGVDPGELAGLELPATVDVMRERVEFLHSLDLSNEDLAAYPLALGCSVRKNMVPVLDYL 151

Query: 188 GKLGVRKSTFTEFLRRYPQVLHASVVVDLAPVVKYLQGMDIKPNDIPRVLERYPEVLGFK 247
           GKLGVR+    + LRRYPQVLHASVVVDLAPVVKYLQGMD++P+D+PRVLERYPE+LGFK
Sbjct: 152 GKLGVRQDALPDLLRRYPQVLHASVVVDLAPVVKYLQGMDVRPHDVPRVLERYPELLGFK 211

Query: 248 LEGTMSTSVAYLVGIGVARREIGGVLTKYPDILGMRVARVIKPFVEYLESLGIPRLAVAR 307
           LEGTMSTS+AYLVGIGVARR++G V+T++P++LGMRV ++IKPFVE+LE +G+ RLA+AR
Sbjct: 212 LEGTMSTSIAYLVGIGVARRQVGSVITRFPEVLGMRVGKIIKPFVEHLEGIGLQRLAIAR 271

Query: 308 LIEKRPHILGFGLEKKVKPNIQMLLKFNVREEYLSSIVAQYAEIIGMDLETKLLSQRNLL 367
           +IEK+P++LGFGLE KVKPNI+ LL+F VR+E L+ IVAQY +I+G++L  KL +Q++L 
Sbjct: 272 IIEKKPYVLGFGLEDKVKPNIEALLEFGVRKEALAFIVAQYPDILGIELRDKLATQQSLF 331

Query: 368 KSIIELDDDNFGTIIEKMPQIVSLSSSAVINHVDFLKSCGFSLVQVKNMVIGCPQLLALN 427
           +S I +  ++FG +IE+MPQ +SL  +AV+ HV+FL SCGF L QV  MV+ CPQLLALN
Sbjct: 332 ESSILVSSEDFGRVIERMPQAISLGRTAVLKHVNFLTSCGFLLSQVSKMVVACPQLLALN 391

Query: 428 LDIMKHSFQFFQMEMGRPLDDLVTFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCS 487
           +DIMK SF++FQ EM R L++LV FPAFFTYGLEST++PRH  V +KG +CSL+WLLNCS
Sbjct: 392 MDIMKMSFEYFQNEMERDLEELVEFPAFFTYGLESTVRPRHEMVAKKGFTCSLAWLLNCS 451

Query: 488 DEKFAERMTYDTIDMEEMETAPTFDMNSLIQPRNDD-SDSDYEEDSEEET 524
           D KF ERM YDTI +EEME   +FD N+L +   D+  D D +EDS+ ++
Sbjct: 452 DAKFDERMKYDTIGIEEMEVDNSFDTNTLSERVEDEVEDEDLDEDSDYDS 501

[Close]

BLAST of MS007260 vs. ExPASy Swiss-Prot
Match: B6TGN4 (Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MTERF4 PE=2 SV=1)

HSP 1 Score: 558.1 bits (1437), Expect = 1.0e-157
Identity = 268/438 (61.19%), Postives = 353/438 (80.59%), Query Frame = 0


Query: 86  ASSLYSHPSLVEMKNVRLENRAKVYEFLCGIGIVPDELDGLELPVTVDVMKERVDFLLKL 145
           +SSLY+ PSL++M+  R   RA V  FL  +G+ P EL GLELPVTVDVM+ER +FL  L
Sbjct: 54  SSSLYARPSLLDMERDRATRRADVDAFLTSLGVDPGELAGLELPVTVDVMRERAEFLGSL 113

Query: 146 GLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLRRYPQVLHASVVVDLAP 205
           GLT ED+  YPL LGCSV+KNM+PVLDYLGKLGVR+    + LRRYPQVLHASVVVDLAP
Sbjct: 114 GLTQEDLAAYPLALGCSVRKNMVPVLDYLGKLGVRRDALPDLLRRYPQVLHASVVVDLAP 173

Query: 206 VVKYLQGMDIKPNDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPD 265
           VVKYLQGMD++P D+PRVLERYPE+LGFKLEGTMSTSVAYLVGIGV RR++G V+T++P+
Sbjct: 174 VVKYLQGMDVRPTDVPRVLERYPELLGFKLEGTMSTSVAYLVGIGVGRRQVGSVITRFPE 233

Query: 266 ILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRPHILGFGLEKKVKPNIQMLLKFNVRE 325
           +LGMRV ++IKPFVE+LE +G+ RLA+AR+IEK+P++LGFGL++KVKPNI+ L+   VR+
Sbjct: 234 VLGMRVGKIIKPFVEHLEGIGLQRLAIARIIEKKPYVLGFGLQEKVKPNIEALVDIGVRK 293

Query: 326 EYLSSIVAQYAEIIGMDLETKLLSQRNLLKSIIELDDDNFGTIIEKMPQIVSLSSSAVIN 385
           E L+SIV QY +++G++L  KL++Q++L +S I +  ++FG ++E+MPQ +SL  +AV+ 
Sbjct: 294 EALASIVMQYPDVLGLELRDKLVAQQSLFESSILVSREDFGRVLERMPQAISLGRAAVLK 353

Query: 386 HVDFLKSCGFSLVQVKNMVIGCPQLLALNLDIMKHSFQFFQMEMGRPLDDLVTFPAFFTY 445
           HV+FL +CGF L QV  MV+ CPQLLALN+DIM+ +F++F+ EM R L++LV FPAFFTY
Sbjct: 354 HVNFLTACGFMLSQVSKMVVACPQLLALNIDIMRMNFEYFKNEMERDLEELVEFPAFFTY 413

Query: 446 GLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFAERMTYDTIDMEEMETAPTFDMNSLIQ 505
           G+EST++PRH  V +KG++CSL+WLLNCSD KF ERM YDTI +EEME   + DMN+ + 
Sbjct: 414 GIESTVRPRHEMVSRKGLTCSLAWLLNCSDAKFDERMKYDTIGVEEMEREDSSDMNASVD 473

Query: 506 PRNDD--SDSDYEEDSEE 522
               +   DSDY +  +E
Sbjct: 474 EVESEEYEDSDYGDSDDE 491

[Close]

BLAST of MS007260 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 7.1e-34
Identity = 93/361 (25.76%), Postives = 179/361 (49.58%), Query Frame = 0


Query: 164 KKNMIPVLDYLGKLGVRKSTFTEFLRRYPQVLHASVVVDLAPVVKYLQGMDIKPNDIPRV 223
           ++ +  +++YL   GVR+      + R P++L  S + ++   V +   M +  ND   +
Sbjct: 278 REELNEIVEYLESNGVRRDWMGYVVGRCPELLSFS-MEEVKSRVDFFLKMGMNQNDFGTM 337

Query: 224 LERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPDILGMRVARVIKPFVEYLE 283
           +  YP+++GF     M   + YL   G++  E+G +L   P ++G  +    KP V+Y  
Sbjct: 338 VYDYPKIIGFFSFQVMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFY 397

Query: 284 SLGIPRLAVARLIEKRPHILGFGLEKKVKPNIQMLLKFNVREEYLSSIVAQYAEIIGMDL 343
            LGIP+  + R++  +P +    LEK + P ++ L +  +  E + +++ ++  ++   L
Sbjct: 398 YLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSL 457

Query: 344 ETKLLSQRNLLKSIIELDDDNFGTIIEKMPQIVSLSSSAVIN-HVDFLKSCGFSLVQVKN 403
             K+      L +   +   + G +I   P ++  S    +  ++ +  S G    Q+  
Sbjct: 458 YKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGE 517

Query: 404 MVIGCPQLLALNLDIMKHSFQFFQMEMGRPLDDLVTFPAFFTYGLESTIKPRHRKVVQKG 463
           M+   P LL  N+D ++  +++ +  M RPL DL+ FP FF+Y LE  I PRH  +V+  
Sbjct: 518 MIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENR 577

Query: 464 ISCSLSWLLNCSDEKFAERMTYDTIDMEEMETAPTFDMNSLIQPRN-DDSDSDYEEDSEE 523
           ++  L ++L C+DE+F ER   D ++  E   A     +S     N  D +  + +++EE
Sbjct: 578 VNFKLRYMLACTDEEF-ERRVRDKVERRERFEAGLDSEDSQPSDENISDQEIAFSDEAEE 636

[Close]

BLAST of MS007260 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 4.3e-31
Identity = 68/276 (24.64%), Postives = 147/276 (53.26%), Query Frame = 0


Query: 215 IKPNDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPDILGMRVARV 274
           I+   +P ++ R P++L  +L+  +   V  L  +G   RE+   +TK+P IL   V   
Sbjct: 54  IQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEK 113

Query: 275 IKPFVEYLESLGIPRLAVARLIEKRPHILGFGLEKKVKPNIQMLLKFNVREE-YLSSIVA 334
           + P + + ++LG+P   + ++I   P ++ + ++ K+   +  L    + ++  +  ++ 
Sbjct: 114 LCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLV 173

Query: 335 QYAEIIGMDLETKLLSQRNLLKSIIELDDDNFGTIIEKMPQIVSLSSSAVIN-HVDFLKS 394
           +   ++G  ++ +L      LKS + L +D   +++   PQ++    + ++  + D+LK 
Sbjct: 174 KNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKE 233

Query: 395 CGFSLVQVKNMVIGCPQLLALNL-DIMKHSFQFFQMEMGRPLDDLVTFPAFFTYGLESTI 454
           CGF   Q+  MV G PQ+L  ++ + ++   +F    MGR +D++ ++P FF +GL+  +
Sbjct: 234 CGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKV 293

Query: 455 KPRHRKVVQKGISCSLSWLLNCSDEKFAERMTYDTI 488
           + R + V +  I CSL  +L+C+ +KF E+  +  +
Sbjct: 294 ESRFKLVKKNNIDCSLREMLDCNTKKFHEKFGFSEV 329

[Close]

BLAST of MS007260 vs. ExPASy TrEMBL
Match: A0A6J1DUY1 (transcription termination factor MTERF4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111023323 PE=3 SV=1)

HSP 1 Score: 1015.0 bits (2623), Expect = 1.1e-292
Identity = 519/523 (99.24%), Postives = 521/523 (99.62%), Query Frame = 0


Query: 1   MIRRHAGVVKPNFSIIVPKMPTLKCCKFTFTTTSIFQTPSNRDRRRGLITRLQYSDGDRR 60
           MIRRHAGVVKPNFSIIVPKMPTLKCCKFTFTTTSIFQTPSNRDRRRGLITRLQYSDGDRR
Sbjct: 2   MIRRHAGVVKPNFSIIVPKMPTLKCCKFTFTTTSIFQTPSNRDRRRGLITRLQYSDGDRR 61

Query: 61  TVSKSLHSTITSKPSSTRVGRKEGSASSLYSHPSLVEMKNVRLENRAKVYEFLCGIGIVP 120
           TVSKSLHSTITSKPSSTRVGRKEGSASSLYSHPSLVEMKNVRLENRAKVYEFLCGIGIVP
Sbjct: 62  TVSKSLHSTITSKPSSTRVGRKEGSASSLYSHPSLVEMKNVRLENRAKVYEFLCGIGIVP 121

Query: 121 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 180
           DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR
Sbjct: 122 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 181

Query: 181 KSTFTEFLRRYPQVLHASVVVDLAPVVKYLQGMDIKPNDIPRVLERYPEVLGFKLEGTMS 240
           KSTFTEFLRRYPQVLHASVVVDLAPVVKYLQGMDIKPNDIP VLERYPEVLGFKLEGTMS
Sbjct: 182 KSTFTEFLRRYPQVLHASVVVDLAPVVKYLQGMDIKPNDIPHVLERYPEVLGFKLEGTMS 241

Query: 241 TSVAYLVGIGVARREIGGVLTKYPDILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 300
           TSVAYLVGIGVAR+EIGGVLTKYPDILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP
Sbjct: 242 TSVAYLVGIGVARKEIGGVLTKYPDILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 301

Query: 301 HILGFGLEKKVKPNIQMLLKFNVREEYLSSIVAQYAEIIGMDLETKLLSQRNLLKSIIEL 360
           HILGFGLEKKVKPNIQMLLKFNVREEYLSSIVAQYAEIIGMDLETKLLSQRNLLKSIIEL
Sbjct: 302 HILGFGLEKKVKPNIQMLLKFNVREEYLSSIVAQYAEIIGMDLETKLLSQRNLLKSIIEL 361

Query: 361 DDDNFGTIIEKMPQIVSLSSSAVINHVDFLKSCGFSLVQVKNMVIGCPQLLALNLDIMKH 420
           DDDNFGTII KMPQIVSLSSSAVINHVDFLKSCGFSLVQVKNMVIGCPQLLALNLDIMKH
Sbjct: 362 DDDNFGTIIGKMPQIVSLSSSAVINHVDFLKSCGFSLVQVKNMVIGCPQLLALNLDIMKH 421

Query: 421 SFQFFQMEMGRPLDDLVTFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFAE 480
           SFQFFQMEMGRPLDDLVTFPAFFTYGLESTIKPRHRKVVQKGI+CSLSWLLNCSDEKFAE
Sbjct: 422 SFQFFQMEMGRPLDDLVTFPAFFTYGLESTIKPRHRKVVQKGITCSLSWLLNCSDEKFAE 481

Query: 481 RMTYDTIDMEEMETAPTFDMNSLIQPRNDDSDSDYEEDSEEET 524
           RMTYDTIDMEEMETAPTFDMNSLIQPRNDDSDSDYEEDSEEET
Sbjct: 482 RMTYDTIDMEEMETAPTFDMNSLIQPRNDDSDSDYEEDSEEET 524

[Close]

BLAST of MS007260 vs. ExPASy TrEMBL
Match: A0A6J1FDE7 (transcription termination factor MTERF4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111444359 PE=3 SV=1)

HSP 1 Score: 924.9 bits (2389), Expect = 1.5e-265
Identity = 475/523 (90.82%), Postives = 497/523 (95.03%), Query Frame = 0


Query: 1   MIRRHAGVVKPNFSIIVPKMPTLKCCKFTFTTTSIFQTPSNRDRRRGLITRLQYSDGDRR 60
           MIR H GVVKPNFSI++ +MPTLKC KF F TTS FQT  N ++RRGLIT+LQYS GD R
Sbjct: 2   MIRGHTGVVKPNFSIMLLEMPTLKCHKFKFDTTSTFQTSPNHEKRRGLITKLQYSRGDWR 61

Query: 61  TVSKSLHSTITSKPSSTRVGRKEGSASSLYSHPSLVEMKNVRLENRAKVYEFLCGIGIVP 120
           TVSKSLHSTITSKP S++VGRKEGSASSLYS PSLVEMKNVR ENRAKVYEFL GIGIVP
Sbjct: 62  TVSKSLHSTITSKPYSSKVGRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIVP 121

Query: 121 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 180
           DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNM+PVLDYLGKLGVR
Sbjct: 122 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVR 181

Query: 181 KSTFTEFLRRYPQVLHASVVVDLAPVVKYLQGMDIKPNDIPRVLERYPEVLGFKLEGTMS 240
           KSTFTEFLRRYPQVLH+SVVVDL PVVKYLQGMDIKP+DIPRVLERYPEVLGFKLEGTMS
Sbjct: 182 KSTFTEFLRRYPQVLHSSVVVDLGPVVKYLQGMDIKPSDIPRVLERYPEVLGFKLEGTMS 241

Query: 241 TSVAYLVGIGVARREIGGVLTKYPDILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 300
           TSVAYLVGIGVARREIGGVLTKYP+ILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP
Sbjct: 242 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 301

Query: 301 HILGFGLEKKVKPNIQMLLKFNVREEYLSSIVAQYAEIIGMDLETKLLSQRNLLKSIIEL 360
           HILGFGLEK+VKPNIQ+LL+FNVRE YLSSIVAQYAEIIGMDLETKL SQRNLLKSIIEL
Sbjct: 302 HILGFGLEKRVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL 361

Query: 361 DDDNFGTIIEKMPQIVSLSSSAVINHVDFLKSCGFSLVQVKNMVIGCPQLLALNLDIMKH 420
           D+DNFGTIIEKMPQ+VSLSSSAV +HVD LKSCGFSL QVKNMVIGCPQLLALNLDIMKH
Sbjct: 362 DNDNFGTIIEKMPQVVSLSSSAVNSHVDCLKSCGFSLQQVKNMVIGCPQLLALNLDIMKH 421

Query: 421 SFQFFQMEMGRPLDDLVTFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFAE 480
           SFQFFQ EMGRPLDDLV FPAFFTYGLESTIKPRHRKVVQKG++CSLSWLLNCSDEKFAE
Sbjct: 422 SFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFAE 481

Query: 481 RMTYDTIDMEEMETAPTFDMNSLIQPRNDDSDSDYEEDSEEET 524
           RMTYDTIDMEEMETAPTFDM+SL QPR D+SDSDYEEDSEEET
Sbjct: 482 RMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEET 524

[Close]

BLAST of MS007260 vs. ExPASy TrEMBL
Match: A0A6J1HPD6 (transcription termination factor MTERF4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111465502 PE=3 SV=1)

HSP 1 Score: 914.8 bits (2363), Expect = 1.6e-262
Identity = 470/523 (89.87%), Postives = 492/523 (94.07%), Query Frame = 0


Query: 1   MIRRHAGVVKPNFSIIVPKMPTLKCCKFTFTTTSIFQTPSNRDRRRGLITRLQYSDGDRR 60
           MIR H GVVKPNFSI++ +MPTLKC KF F TTS FQ   N ++R  LIT+LQYS GDR+
Sbjct: 2   MIRGHTGVVKPNFSIMLLEMPTLKCHKFKFGTTSTFQASPNHEKRGSLITKLQYSRGDRK 61

Query: 61  TVSKSLHSTITSKPSSTRVGRKEGSASSLYSHPSLVEMKNVRLENRAKVYEFLCGIGIVP 120
           TVSKSLHSTITSKP S++V RKEGSASSLYS PSLVEMKNVR ENRAKVYEFL GIGIVP
Sbjct: 62  TVSKSLHSTITSKPYSSKVSRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIVP 121

Query: 121 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 180
           DELDGLELPVTVDVMKERVDFLLKLGL IEDINNYPLVLGCSVKKNM+PVLDYLGKLGVR
Sbjct: 122 DELDGLELPVTVDVMKERVDFLLKLGLAIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVR 181

Query: 181 KSTFTEFLRRYPQVLHASVVVDLAPVVKYLQGMDIKPNDIPRVLERYPEVLGFKLEGTMS 240
           KSTFTEFLRRYPQVLH+SVVVDL PVVKYLQGMDIKP+DIPRVLERYPEVLGFKLEGTMS
Sbjct: 182 KSTFTEFLRRYPQVLHSSVVVDLGPVVKYLQGMDIKPSDIPRVLERYPEVLGFKLEGTMS 241

Query: 241 TSVAYLVGIGVARREIGGVLTKYPDILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 300
           TSVAYLVGIGVARREIGGVLTKYP+ILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP
Sbjct: 242 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 301

Query: 301 HILGFGLEKKVKPNIQMLLKFNVREEYLSSIVAQYAEIIGMDLETKLLSQRNLLKSIIEL 360
           HILGFGLEKKVKPNIQ+LL+FNVRE YLSSIVAQYAEIIGMDLETKL SQRNLLKSIIEL
Sbjct: 302 HILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL 361

Query: 361 DDDNFGTIIEKMPQIVSLSSSAVINHVDFLKSCGFSLVQVKNMVIGCPQLLALNLDIMKH 420
           D+DNFGTIIEKMPQ+VSLSSSAV +HVDFLKSCGFSL QVKNMVIGCPQLLALNLDIMKH
Sbjct: 362 DNDNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMKH 421

Query: 421 SFQFFQMEMGRPLDDLVTFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFAE 480
           SFQFFQ EMGRPLDDLV FPAFFTYGLESTIKPRHRKVV KGI+CSLSWLLNCSDEKFAE
Sbjct: 422 SFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVHKGITCSLSWLLNCSDEKFAE 481

Query: 481 RMTYDTIDMEEMETAPTFDMNSLIQPRNDDSDSDYEEDSEEET 524
           RMTYDTIDMEEMETAP+FDM+SL QPR D+SDSDYEED EEET
Sbjct: 482 RMTYDTIDMEEMETAPSFDMSSLTQPRYDESDSDYEEDGEEET 524

[Close]

BLAST of MS007260 vs. ExPASy TrEMBL
Match: A0A0A0KRV7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G466880 PE=3 SV=1)

HSP 1 Score: 896.0 bits (2314), Expect = 7.7e-257
Identity = 454/524 (86.64%), Postives = 490/524 (93.51%), Query Frame = 0


Query: 1   MIRRHAGVVKPNFSIIVPKMPTLKCCKFTFTTTSIFQTPSNRDRRRGLITRLQYSDGDRR 60
           MIR HAGV KPNFS+++ +M TL+C  F FT T  FQ P N ++R+GLIT+LQYS GDRR
Sbjct: 1   MIRGHAGVAKPNFSLMLFEMSTLECHNFKFTATRTFQMPYNHEKRKGLITQLQYSHGDRR 60

Query: 61  TVSKSLHSTITSKPSSTRVGRKEGS-ASSLYSHPSLVEMKNVRLENRAKVYEFLCGIGIV 120
           TV KSLHSTI+SK  S++V RKEGS  SSLYS PSLVEMKNVRLENR+KVYEFL GIG+V
Sbjct: 61  TVFKSLHSTISSKSYSSKVDRKEGSIGSSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVV 120

Query: 121 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGV 180
           PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPL+LGCSVKKNMIPVLDYLGKLGV
Sbjct: 121 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLILGCSVKKNMIPVLDYLGKLGV 180

Query: 181 RKSTFTEFLRRYPQVLHASVVVDLAPVVKYLQGMDIKPNDIPRVLERYPEVLGFKLEGTM 240
           RKSTFTEFL+RYPQVLH+SVVVDLAPV+KYLQGMDIKPNDIPRVLERYPEVLGFKLEGTM
Sbjct: 181 RKSTFTEFLKRYPQVLHSSVVVDLAPVIKYLQGMDIKPNDIPRVLERYPEVLGFKLEGTM 240

Query: 241 STSVAYLVGIGVARREIGGVLTKYPDILGMRVARVIKPFVEYLESLGIPRLAVARLIEKR 300
           STSVAYLVGIGV RREIGGVLTKYP+ILGMRVARVIKPFVEYLE LGIPRLAVARLIEKR
Sbjct: 241 STSVAYLVGIGVTRREIGGVLTKYPEILGMRVARVIKPFVEYLEGLGIPRLAVARLIEKR 300

Query: 301 PHILGFGLEKKVKPNIQMLLKFNVREEYLSSIVAQYAEIIGMDLETKLLSQRNLLKSIIE 360
           PHILGFGLEKKVKPNIQ+LL+F VRE YL SIVAQYAEIIG+DLE  L +QRNLLKS+IE
Sbjct: 301 PHILGFGLEKKVKPNIQLLLEFKVREAYLPSIVAQYAEIIGIDLEANLQTQRNLLKSLIE 360

Query: 361 LDDDNFGTIIEKMPQIVSLSSSAVINHVDFLKSCGFSLVQVKNMVIGCPQLLALNLDIMK 420
           LD+DNFGTIIEKMPQ+VSLS SAVINHVDFLK+CGFSL+QVKNMVIGCPQLLALN+DIMK
Sbjct: 361 LDNDNFGTIIEKMPQVVSLSRSAVINHVDFLKTCGFSLLQVKNMVIGCPQLLALNIDIMK 420

Query: 421 HSFQFFQMEMGRPLDDLVTFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFA 480
           HSF+FFQMEMGRPL+DL TFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNC+DEKF 
Sbjct: 421 HSFEFFQMEMGRPLEDLATFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCADEKFM 480

Query: 481 ERMTYDTIDMEEMETAPTFDMNSLIQPRNDDSDSDYEEDSEEET 524
           ERM+YDTIDMEEMET PTFDMNSLIQPRND+SDS+YEEDSEEE+
Sbjct: 481 ERMSYDTIDMEEMETTPTFDMNSLIQPRNDESDSEYEEDSEEES 524

[Close]

BLAST of MS007260 vs. ExPASy TrEMBL
Match: A0A1S3CR33 (transcription termination factor MTERF4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503367 PE=3 SV=1)

HSP 1 Score: 892.1 bits (2304), Expect = 1.1e-255
Identity = 456/524 (87.02%), Postives = 488/524 (93.13%), Query Frame = 0


Query: 1   MIRRHAGVVKPNFSIIVPKMPTLKCCKFTFTTTSIFQTPSNRDRRRGLITRLQYSDGDRR 60
           MIR HAGVVKPN S ++ +M TL+C  F FT T  F T    ++RR L T+LQYS GDRR
Sbjct: 1   MIRGHAGVVKPNVSFMLFEMSTLECHNFKFTATPTFLTSCIHEKRRCLTTQLQYSHGDRR 60

Query: 61  TVSKSLHSTITSKPSSTRVGRKEGSA-SSLYSHPSLVEMKNVRLENRAKVYEFLCGIGIV 120
           TV KSLHSTI+SKP S++VGRK GS+ SSLYS PSLVEMKNVRLENR+KVYEFL GIG+V
Sbjct: 61  TVFKSLHSTISSKPYSSKVGRKGGSSGSSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVV 120

Query: 121 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGV 180
           PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGV
Sbjct: 121 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGV 180

Query: 181 RKSTFTEFLRRYPQVLHASVVVDLAPVVKYLQGMDIKPNDIPRVLERYPEVLGFKLEGTM 240
           RKSTFTEFL+RYPQVLH+SVVVDLAPVVKYLQGMDIKPNDIPRVLERYPEVLGFKLEGTM
Sbjct: 181 RKSTFTEFLKRYPQVLHSSVVVDLAPVVKYLQGMDIKPNDIPRVLERYPEVLGFKLEGTM 240

Query: 241 STSVAYLVGIGVARREIGGVLTKYPDILGMRVARVIKPFVEYLESLGIPRLAVARLIEKR 300
           STSVAYLVGIGVARREIGG+LTKYP+ILGMRVARVIKPFVEYLE LGIPRLAVARLIEKR
Sbjct: 241 STSVAYLVGIGVARREIGGILTKYPEILGMRVARVIKPFVEYLEGLGIPRLAVARLIEKR 300

Query: 301 PHILGFGLEKKVKPNIQMLLKFNVREEYLSSIVAQYAEIIGMDLETKLLSQRNLLKSIIE 360
           PHILGFGLEKKVKPNIQ+LL+F VRE YL SIVAQYAEIIGMDLE  L +QRNLLKS+IE
Sbjct: 301 PHILGFGLEKKVKPNIQLLLEFKVREAYLPSIVAQYAEIIGMDLEANLQTQRNLLKSLIE 360

Query: 361 LDDDNFGTIIEKMPQIVSLSSSAVINHVDFLKSCGFSLVQVKNMVIGCPQLLALNLDIMK 420
           LD+DNFGTIIEKMPQIVSLS SAVINHVDFLK+CGFSL+QVKNMVIGCPQLLALN+DIMK
Sbjct: 361 LDNDNFGTIIEKMPQIVSLSRSAVINHVDFLKTCGFSLLQVKNMVIGCPQLLALNIDIMK 420

Query: 421 HSFQFFQMEMGRPLDDLVTFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFA 480
           HSF+FFQMEMGRPL+DL TFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNC+DEKF 
Sbjct: 421 HSFEFFQMEMGRPLEDLATFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCADEKFV 480

Query: 481 ERMTYDTIDMEEMETAPTFDMNSLIQPRNDDSDSDYEEDSEEET 524
           ERM+YDTIDMEEMET PTFDMNSL+QPRND+SDS+YEEDSEEET
Sbjct: 481 ERMSYDTIDMEEMETTPTFDMNSLVQPRNDESDSEYEEDSEEET 524

[Close]

BLAST of MS007260 vs. TAIR 10
Match: AT4G02990.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 672.5 bits (1734), Expect = 2.7e-193
Identity = 354/534 (66.29%), Postives = 425/534 (79.59%), Query Frame = 0


Query: 2   IRRHAGVVKPNFSIIVPKMPTLKCCKFTFTTTSIFQTPSNRDRR--RGLITRLQYSDGDR 61
           IR   G  KP F ++  + P+    +    + S +    N  +R   G+   +Q +  +R
Sbjct: 3   IRFCNGFTKPGFLLVHFEPPSFFAVRSRSLSDSTYGNLCNHKKRPGTGIGLTVQCAIANR 62

Query: 62  RTVSKSLHS--TITSKPSSTRVGR-------KEGSASSLYSHPSLVEMKNVRLENRAKVY 121
           R  S+SL S     S  SS+  GR       K   + SLYS PSL++M   +  NRAKVY
Sbjct: 63  RFSSRSLDSPRRERSSRSSSSSGRDRDRDKDKGRDSKSLYSRPSLLDMNKEKAANRAKVY 122

Query: 122 EFLCGIGIVPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPV 181
           EFL GIGIVPDELDGLELPVT DVMKERV+FL KLGLTIEDINNYPLVLGCSVKKNM+PV
Sbjct: 123 EFLRGIGIVPDELDGLELPVTADVMKERVEFLHKLGLTIEDINNYPLVLGCSVKKNMVPV 182

Query: 182 LDYLGKLGVRKSTFTEFLRRYPQVLHASVVVDLAPVVKYLQGMDIKPNDIPRVLERYPEV 241
           LDYLGKLGVRKSTFTEFLRRYPQVLH+SVV+DLAPVVKYLQG+DIKP+D+PRVLERYPEV
Sbjct: 183 LDYLGKLGVRKSTFTEFLRRYPQVLHSSVVIDLAPVVKYLQGLDIKPSDVPRVLERYPEV 242

Query: 242 LGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPDILGMRVARVIKPFVEYLESLGIPRL 301
           LGFKLEGTMSTSVAYLVGIGVARREIGG+LT+YP+ILGMRVAR+IKP VEYLE LGIPRL
Sbjct: 243 LGFKLEGTMSTSVAYLVGIGVARREIGGILTRYPEILGMRVARIIKPLVEYLEVLGIPRL 302

Query: 302 AVARLIEKRPHILGFGLEKKVKPNIQMLLKFNVREEYLSSIVAQYAEIIGMDLETKLLSQ 361
           A ARLIEKRPHILGF L+  VKPN+Q+L  FNVRE  L SI+AQY EIIG+DL+ KL +Q
Sbjct: 303 AAARLIEKRPHILGFELDDTVKPNVQILQDFNVRETSLPSIIAQYPEIIGIDLKPKLDTQ 362

Query: 362 RNLLKSIIELDDDNFGTIIEKMPQIVSLSSSAVINHVDFLKSCGFSLVQVKNMVIGCPQL 421
           R LL S I L+ ++ G++IE+MPQ VSLS S ++ H+DFL  CGFS+ Q + MVIGCPQ+
Sbjct: 363 RKLLCSAIHLNPEDLGSLIERMPQFVSLSESPMLKHIDFLTKCGFSIDQTREMVIGCPQV 422

Query: 422 LALNLDIMKHSFQFFQMEMGRPLDDLVTFPAFFTYGLESTIKPRHRKVVQKGISCSLSWL 481
           LALNL IMK SF++FQ EM RPL DLV FPAFFTYGLEST+KPRH+K+++KGI CSL+W+
Sbjct: 423 LALNLGIMKLSFEYFQKEMKRPLQDLVDFPAFFTYGLESTVKPRHKKIIKKGIKCSLAWM 482

Query: 482 LNCSDEKFAERMTYDTIDMEEMETAP-TFDMNSLIQP-RNDDSDSDYEEDSEEE 523
           LNCSDEKF +RM+YDTID+EE+ET P +FDMN+L+QP R ++SDS+YEE+ +++
Sbjct: 483 LNCSDEKFEQRMSYDTIDIEEVETDPSSFDMNTLMQPEREEESDSEYEEEEDDD 536

[Close]

BLAST of MS007260 vs. TAIR 10
Match: AT2G44020.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 448.7 bits (1153), Expect = 6.2e-126
Identity = 213/428 (49.77%), Postives = 317/428 (74.07%), Query Frame = 0


Query: 95  LVEMKNVRLENRAKVYEFLCGIGIVPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINN 154
           +++ K  +L NR K+ ++L G+GI+ DEL+ +ELP T++VM ERV+FL KLGLTI+DIN 
Sbjct: 72  VIQGKKEKLVNRVKICDYLKGLGIITDELESIELPSTIEVMCERVEFLQKLGLTIDDINE 131

Query: 155 YPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLRRYPQVLHASVVVDLAPVVKYLQGMD 214
           YPL+LGCSV+KN+IPVL YL K+G+ +S   EF++ YPQVLHASVVV+LAPVVK+L+G+D
Sbjct: 132 YPLMLGCSVRKNLIPVLAYLEKIGISRSKLGEFVKNYPQVLHASVVVELAPVVKFLRGLD 191

Query: 215 IKPNDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPDILGMRVARV 274
           ++  D+  VL +YPE+LGFKLEGTMSTSVAYLV IGV+ R+IG ++T+YP +LGMRV  +
Sbjct: 192 VEKQDLGYVLMKYPELLGFKLEGTMSTSVAYLVSIGVSPRDIGPMVTQYPYLLGMRVGTM 251

Query: 275 IKPFVEYLESLGIPRLAVARLIEKRPHILGFGLEKKVKPNIQMLLKFNVREEYLSSIVAQ 334
           IKP V+YL S+G+P+  VAR++EKR +I+G+ LE+ VKPN+  L+ F V++E L  ++AQ
Sbjct: 252 IKPLVDYLISIGLPKKIVARMLEKRSYIVGYNLEETVKPNVDCLISFGVKKELLPLLIAQ 311

Query: 335 YAEIIGMDLETKLLSQRNLLKSIIELDDDNFGTIIEKMPQIVSLSSSAVINHVDFLKSCG 394
           Y +I+G+ ++ K+ +Q+      +++D + F  ++EKMPQIVSL  + ++  ++FL    
Sbjct: 312 YPQILGLPVKAKMSTQQYFFSLKLKIDPEGFARVVEKMPQIVSLKQNVIMKPIEFLLGRA 371

Query: 395 FSLVQVKNMVIGCPQLLALNLDIMKHSFQFFQMEMGRPLDDLVTFPAFFTYGLESTIKPR 454
           F +  +  MV+ CPQ+L   +++MK+S+ F++ EMGRP+ +LV +P +FTY LES IKPR
Sbjct: 372 FQVEDIAKMVVRCPQILCSRVELMKNSYYFYKTEMGRPMKELVEYPEYFTYSLESRIKPR 431

Query: 455 HRKVVQKGISCSLSWLLNCSDEKFAERMTYDTIDMEEMETAPTFDMNSLIQPRNDDSDSD 514
           ++K+  KGI  SL+W LNCSD++F ER+  + ID +     PTFDM   ++    +  +D
Sbjct: 432 YQKLQSKGIRSSLNWFLNCSDQRFEERLQGNFIDPD--TEGPTFDMGGKLEMPGGEIVTD 491

Query: 515 YEEDSEEE 523
            EED  ++
Sbjct: 492 EEEDESDD 497

[Close]

BLAST of MS007260 vs. TAIR 10
Match: AT2G21710.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 146.7 bits (369), Expect = 5.1e-35
Identity = 93/361 (25.76%), Postives = 179/361 (49.58%), Query Frame = 0


Query: 164 KKNMIPVLDYLGKLGVRKSTFTEFLRRYPQVLHASVVVDLAPVVKYLQGMDIKPNDIPRV 223
           ++ +  +++YL   GVR+      + R P++L  S + ++   V +   M +  ND   +
Sbjct: 278 REELNEIVEYLESNGVRRDWMGYVVGRCPELLSFS-MEEVKSRVDFFLKMGMNQNDFGTM 337

Query: 224 LERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPDILGMRVARVIKPFVEYLE 283
           +  YP+++GF     M   + YL   G++  E+G +L   P ++G  +    KP V+Y  
Sbjct: 338 VYDYPKIIGFFSFQVMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFY 397

Query: 284 SLGIPRLAVARLIEKRPHILGFGLEKKVKPNIQMLLKFNVREEYLSSIVAQYAEIIGMDL 343
            LGIP+  + R++  +P +    LEK + P ++ L +  +  E + +++ ++  ++   L
Sbjct: 398 YLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSL 457

Query: 344 ETKLLSQRNLLKSIIELDDDNFGTIIEKMPQIVSLSSSAVIN-HVDFLKSCGFSLVQVKN 403
             K+      L +   +   + G +I   P ++  S    +  ++ +  S G    Q+  
Sbjct: 458 YKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGE 517

Query: 404 MVIGCPQLLALNLDIMKHSFQFFQMEMGRPLDDLVTFPAFFTYGLESTIKPRHRKVVQKG 463
           M+   P LL  N+D ++  +++ +  M RPL DL+ FP FF+Y LE  I PRH  +V+  
Sbjct: 518 MIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENR 577

Query: 464 ISCSLSWLLNCSDEKFAERMTYDTIDMEEMETAPTFDMNSLIQPRN-DDSDSDYEEDSEE 523
           ++  L ++L C+DE+F ER   D ++  E   A     +S     N  D +  + +++EE
Sbjct: 578 VNFKLRYMLACTDEEF-ERRVRDKVERRERFEAGLDSEDSQPSDENISDQEIAFSDEAEE 636

[Close]

BLAST of MS007260 vs. TAIR 10
Match: AT4G38160.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 137.5 bits (345), Expect = 3.1e-32
Identity = 68/276 (24.64%), Postives = 147/276 (53.26%), Query Frame = 0


Query: 215 IKPNDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPDILGMRVARV 274
           I+   +P ++ R P++L  +L+  +   V  L  +G   RE+   +TK+P IL   V   
Sbjct: 54  IQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEK 113

Query: 275 IKPFVEYLESLGIPRLAVARLIEKRPHILGFGLEKKVKPNIQMLLKFNVREE-YLSSIVA 334
           + P + + ++LG+P   + ++I   P ++ + ++ K+   +  L    + ++  +  ++ 
Sbjct: 114 LCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLV 173

Query: 335 QYAEIIGMDLETKLLSQRNLLKSIIELDDDNFGTIIEKMPQIVSLSSSAVIN-HVDFLKS 394
           +   ++G  ++ +L      LKS + L +D   +++   PQ++    + ++  + D+LK 
Sbjct: 174 KNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKE 233

Query: 395 CGFSLVQVKNMVIGCPQLLALNL-DIMKHSFQFFQMEMGRPLDDLVTFPAFFTYGLESTI 454
           CGF   Q+  MV G PQ+L  ++ + ++   +F    MGR +D++ ++P FF +GL+  +
Sbjct: 234 CGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKV 293

Query: 455 KPRHRKVVQKGISCSLSWLLNCSDEKFAERMTYDTI 488
           + R + V +  I CSL  +L+C+ +KF E+  +  +
Sbjct: 294 ESRFKLVKKNNIDCSLREMLDCNTKKFHEKFGFSEV 329

[Close]

BLAST of MS007260 vs. TAIR 10
Match: AT4G38160.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 137.5 bits (345), Expect = 3.1e-32
Identity = 68/276 (24.64%), Postives = 147/276 (53.26%), Query Frame = 0


Query: 215 IKPNDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPDILGMRVARV 274
           I+   +P ++ R P++L  +L+  +   V  L  +G   RE+   +TK+P IL   V   
Sbjct: 54  IQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEK 113

Query: 275 IKPFVEYLESLGIPRLAVARLIEKRPHILGFGLEKKVKPNIQMLLKFNVREE-YLSSIVA 334
           + P + + ++LG+P   + ++I   P ++ + ++ K+   +  L    + ++  +  ++ 
Sbjct: 114 LCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLV 173

Query: 335 QYAEIIGMDLETKLLSQRNLLKSIIELDDDNFGTIIEKMPQIVSLSSSAVIN-HVDFLKS 394
           +   ++G  ++ +L      LKS + L +D   +++   PQ++    + ++  + D+LK 
Sbjct: 174 KNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKE 233

Query: 395 CGFSLVQVKNMVIGCPQLLALNL-DIMKHSFQFFQMEMGRPLDDLVTFPAFFTYGLESTI 454
           CGF   Q+  MV G PQ+L  ++ + ++   +F    MGR +D++ ++P FF +GL+  +
Sbjct: 234 CGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKV 293

Query: 455 KPRHRKVVQKGISCSLSWLLNCSDEKFAERMTYDTI 488
           + R + V +  I CSL  +L+C+ +KF E+  +  +
Sbjct: 294 ESRFKLVKKNNIDCSLREMLDCNTKKFHEKFGFSEV 329

The following BLAST results are available for this feature:

BLAST of MS007260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156431.1	2.3e-292	99.24	transcription termination factor MTERF4, chloroplastic [Momordica charantia]	[more]
XP_023538106.1	2.2e-266	91.01	transcription termination factor MTERF4, chloroplastic [Cucurbita pepo subsp. pe...	[more]
KAG7021053.1	1.4e-265	90.63	Transcription termination factor MTERF4, chloroplastic, partial [Cucurbita argyr...	[more]
KAG6586221.1	2.4e-265	90.63	Transcription termination factor MTERF4, chloroplastic, partial [Cucurbita argyr...	[more]
XP_022938209.1	3.2e-265	90.82	transcription termination factor MTERF4, chloroplastic [Cucurbita moschata] >XP_...	[more]

BLAST of MS007260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT96	3.7e-192	66.29	Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q6AUK6	7.6e-161	60.85	Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. ja...	[more]
B6TGN4	1.0e-157	61.19	Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MT...	[more]
F4IHL3	7.1e-34	25.76	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9SZL6	4.3e-31	24.64	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]

BLAST of MS007260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DUY1	1.1e-292	99.24	transcription termination factor MTERF4, chloroplastic OS=Momordica charantia OX...	[more]
A0A6J1FDE7	1.5e-265	90.82	transcription termination factor MTERF4, chloroplastic OS=Cucurbita moschata OX=...	[more]
A0A6J1HPD6	1.6e-262	89.87	transcription termination factor MTERF4, chloroplastic OS=Cucurbita maxima OX=36...	[more]
A0A0A0KRV7	7.7e-257	86.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G466880 PE=3 SV=1	[more]
A0A1S3CR33	1.1e-255	87.02	transcription termination factor MTERF4, chloroplastic OS=Cucumis melo OX=3656 G...	[more]

BLAST of MS007260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02990.1	2.7e-193	66.29	Mitochondrial transcription termination factor family protein	[more]
AT2G44020.1	6.2e-126	49.77	Mitochondrial transcription termination factor family protein	[more]
AT2G21710.1	5.1e-35	25.76	Mitochondrial transcription termination factor family protein	[more]
AT4G38160.1	3.1e-32	24.64	Mitochondrial transcription termination factor family protein	[more]
AT4G38160.2	3.1e-32	24.64	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 257..288 e-value: 6.2E-4 score: 29.1 coord: 401..432 e-value: 0.11 score: 21.6 coord: 86..119 e-value: 410.0 score: 6.9 coord: 221..252 e-value: 0.0053 score: 26.0 coord: 366..396 e-value: 0.0068 score: 25.6 coord: 293..324 e-value: 7.3E-4 score: 28.8 coord: 433..464 e-value: 0.047 score: 22.8 coord: 185..216 e-value: 0.0016 score: 27.7 coord: 329..361 e-value: 160.0 score: 10.0 coord: 149..180 e-value: 0.0039 score: 26.4
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 171..479 e-value: 7.6E-105 score: 350.3
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 31..512
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 135..273 e-value: 5.7E-25 score: 89.9 coord: 274..488 e-value: 6.7E-49 score: 168.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 498..523
None	No IPR available	PANTHER	PTHR13068:SF109	TRANSCRIPTION TERMINATION FACTOR MTERF4, CHLOROPLASTIC	coord: 31..512

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS007260.1	MS007260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding