MS007203 (gene) Bitter gourd (TR) v1

Overview


Name	MS007203
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Translation initiation factor IF-3
Location	scaffold25: 1426436 .. 1429883 (+)
RNA-Seq Expression	MS007203
Synteny	MS007203

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGGGCTCACCAGCAGATTCCCTTTCAAACCTCTCTTATCCCAACCCTCCGCCACCACCTCCTCCGCCGCCGCCTCCTCCTCTTCCTCCTCCGCCGCCGCCGCTCCTCCCTTCCGAACCTCAATTTCCCCTCTCCCTCTCTCCTCCTCTGAATCCAATGCCTTCGGATTCCGCCTTCACAACTCCAATTCTCTGCGTCTTATCGTCTCCTCTCCAATTCGTCGCTCTGTATTTGCTCGATTCGGCGGTGCTCCTCGATCTTCAGGACCTGCGGATTCTAAGCGCTCTGACGATGATTTTGGTCTCGATGTTTCCGCCATCAGGTGCGTGCCTTATGGTTCTGTATGTGTACTTGCACGAGTTACGTGTATGGTGTATGAAGCTTGTTTTTGATTTGGAGTTCTTATTTGCGATTGATTGGTATAGGTCAAATAATGTGAGACTTATTGATGCACAACAGAACATGGTAGGTGTTTTTAATTATTGTTTGTTTGTTTTGTCTGGATGGGTTGTGTTTGGGATAAGCGAGTTTTTTGGGTTTCTTTTGCTACAATGCAACACCTGTATGCCAGGCGCCGTAATTTGGAAGTTGTTCTTGAAATGAATAGGTTGGAATCGTGTCAAAGGCCCAGGCCATTCAAATGGCTGAAGACGCTGAACTTGATTTGGTACGTCTTCCTGTTCAATTTTTTTGTTGAAACAGTTTTATATTCTTTGTCAGGGAATTCCAAGGAACCTTGCTCCAAATTTTTTTGGTCTGACAATGACAAATAGCATTGTTAATCTTTCTTGTCACTCAGTTTTTGGTTTTTATCTTCAATACAATTGTTCTGTGTAGAAAAAATGAGCATATAATTGAAAGCTTATAATAGTATTATAATCAAAGAATTATATTATAACTTATAAGTTACAAGTCTTCCATCAAAAACTCGAAGAATTATTGCATGGTGAATGATTTTCATTTCAGAGTTATGCATTAGGTAGGCCAATTTTACTGTTTGCTCCTATATAGAATTGTACTTTTCTCCATAAATCGTCAAAAGAACCTTCTATTCTTCAACACAAATCTTATCGACTGAAAATTTACATGGACGAAAGCTGGGTGATGTGTTGTTATTTAGATATGAAGGAAGAAACTTCATTCTTCATGCGAGTTCTTAACAAAATACTCTTTCAGAAATCAACAAGTTAGTTGTCTTGCATACTCAAGTTTGGCTTGTGGAATTTATGAAGCTCATTTCATATCCGTGCAATTTGTACTTCTTAAGCTGGATAAAGAAAGTTGGACTAATATTTTTTTTTATGGAAGTTAGATATTTGTGTTGCTTTGTCTAGGAGTTTGCTAATTCGTTTCTATTTCATGCAGGTTGTATTATCACCCGATGCAGATCCTCCAGTTGTCAGAATAATGGATTACAAGTATGCCATTTTCTCTCTCTGGTGTCCTCCCTTTCCTTGTTGTGCTTGTGGAAAAGGTTTCATTTGCTGCAATCCAATGCCAATGTGATTAGTTTTAATGATTATGCAAATTCATATAATAAGCTTCTTCTGGTAATGATTCAATTAATACTTTATTTTTAATTAAATGTTACCTAAAAGGTAATATATGACAATGCTAAGAAGACCGAAATGTGGTATATAATGGAGAAAGAATGAAAAATATGATGATCGTTATTCTTCCACTGGGTGAATTAAAAGCCCATGTGGTTTTTCCTTACTGAATTGTTGGTACCTTTATGCTGAGCTATTCTTCCGTCTCTTGTTTCTCAGTAAATATAGGTATGAATTGCAAAAGAAGAAAAGAGGACAGCAGAAGAAAAGTGCTGGTGAATCTCTTTCTTAATAGAGTCTGCATGTTTTCTTTGGTTCCCAAATCTTTCAGATTTGAGGAAAGATACTGATAAAGTGTGCTTTTGAATGTTAGCAACTCGCATGGATTTGAAAGAGCTTAAAATGGGGTAACACATTCCTTCATTTGTTCATATTTATTTTTTCGAAGGCTTCCTTTCTCTTCTTCTTATTCACCTAAAGCCACTCGTACTTGTGACTTCTATGATCGATAATCTACCGACCAATCAACAAGCTAAGAGAGGCTTTGGTTCCTTTGCTTTTTAATTTATGTTACCTATTTCAGAAACATTTTTGTACATTATCCTTTCCTCAATCTCAACCTGTTTGTTGATATTATTATTGCACAGTTATAACATTGACCAACATGATTACTCTGTTCGTTTGAAAGCTGCAAGGAGGTTTTTGAAGGATGGGGACAAGGTTTTATTTTTTATTTAACTATATCTATGTGTGTGTATATATATGTATATATATATATATATTGTCTGTCCATGTATTCAAATATGATTTTTGTGGTTTGTCCGAATCACTTTCTGAAATATATTAACAAAATATTGCAGGTTAAAGTTATAGTGAACTTGAAAGGTCGTGAGAATGAGTTCAGAAATATAGCAATTGAGCTCATCAGACGTTTCCAGGATGAGATTGGGGAGGTATTCTTATTTTCTATCAATTTTGTGCCATGATCGATCTCCTGACTTAGAGCAGTTTTTGTCCATTATGGCAAATATTAGAGCAAAACTTTTTTTTTGGGTAAGAAATGATCATTTCATTGATGAATGAAATTACAAAATAAGCATCCCCAAAATGGAATATGCTGACTTTTCGAAACGATGATTTCATCCTGACTTTCTTTTTGATGTCATATGTGTTAGAGCAAAACATATTGCCCATCATGGTAGTATACTCAATAACATGCTGCAAAACTTTTCAGTTTGAAATTTGAAATGGTAATTTTAGGCAATTGTTTGAACTATTTTTATGTTTGATCTCATTACCCCGTGATAAGCACTTGGTAGTTGTTCCAGAAATGGTTATGGCAAACAGTTTCTGAAGACTGTTTTATAGAACACTTGTTTAAAATAATTGTGAATGCTCGGCTAACTTACGTGAACCTCGACTAATCTAACAAAATAATCTACTTGTTCCTGTGATATTAGATGTTGGAAAATCGAACTCATTTCTCAAGAGTACTTCTGTGTTTTCACTTGCTCCAATGAGCATTAAGCCAATTCATGGTAGTTTAATTGAAAGGTTTTTGAAAAATGCTTGTTTGTATTTGTGAAGTTTTTTCTTATTTGGGTTCGATAATCTCTCTGAAATGCTAGTTTATTTGATGAATGAAAATTTGATGCCATATTTTTTCCTCTGGTTAATATGTTAAACAAAGACAATCTATCGTATATTAATCTCTGTTCTCCCATGACCCGCTCAATATTTTATGATACCACAGCTTGCAACTGAAGAGGCCAAGAACTTCAGAGACAGGAATATATTTATTGTTCTAGTTCCTAACAAGGCTGTTCTACAGAAGGCTCAAGAACCCCCCAAGAAAAAGGACAATCCCGCCATAAATGAAGTTTCGGCTGGTGTT

mRNA sequence

ATGGCTGGGCTCACCAGCAGATTCCCTTTCAAACCTCTCTTATCCCAACCCTCCGCCACCACCTCCTCCGCCGCCGCCTCCTCCTCTTCCTCCTCCGCCGCCGCCGCTCCTCCCTTCCGAACCTCAATTTCCCCTCTCCCTCTCTCCTCCTCTGAATCCAATGCCTTCGGATTCCGCCTTCACAACTCCAATTCTCTGCGTCTTATCGTCTCCTCTCCAATTCGTCGCTCTGTATTTGCTCGATTCGGCGGTGCTCCTCGATCTTCAGGACCTGCGGATTCTAAGCGCTCTGACGATGATTTTGGTCTCGATGTTTCCGCCATCAGGTCAAATAATGTGAGACTTATTGATGCACAACAGAACATGGTTGGAATCGTGTCAAAGGCCCAGGCCATTCAAATGGCTGAAGACGCTGAACTTGATTTGGTTGTATTATCACCCGATGCAGATCCTCCAGTTGTCAGAATAATGGATTACAATTATAACATTGACCAACATGATTACTCTGTTCGTTTGAAAGCTGCAAGGAGGTTTTTGAAGGATGGGGACAAGGTTAAAGTTATAGTGAACTTGAAAGGTCGTGAGAATGAGTTCAGAAATATAGCAATTGAGCTCATCAGACGTTTCCAGGATGAGATTGGGGAGCTTGCAACTGAAGAGGCCAAGAACTTCAGAGACAGGAATATATTTATTGTTCTAGTTCCTAACAAGGCTGTTCTACAGAAGGCTCAAGAACCCCCCAAGAAAAAGGACAATCCCGCCATAAATGAAGTTTCGGCTGGTGTT

Coding sequence (CDS)

ATGGCTGGGCTCACCAGCAGATTCCCTTTCAAACCTCTCTTATCCCAACCCTCCGCCACCACCTCCTCCGCCGCCGCCTCCTCCTCTTCCTCCTCCGCCGCCGCCGCTCCTCCCTTCCGAACCTCAATTTCCCCTCTCCCTCTCTCCTCCTCTGAATCCAATGCCTTCGGATTCCGCCTTCACAACTCCAATTCTCTGCGTCTTATCGTCTCCTCTCCAATTCGTCGCTCTGTATTTGCTCGATTCGGCGGTGCTCCTCGATCTTCAGGACCTGCGGATTCTAAGCGCTCTGACGATGATTTTGGTCTCGATGTTTCCGCCATCAGGTCAAATAATGTGAGACTTATTGATGCACAACAGAACATGGTTGGAATCGTGTCAAAGGCCCAGGCCATTCAAATGGCTGAAGACGCTGAACTTGATTTGGTTGTATTATCACCCGATGCAGATCCTCCAGTTGTCAGAATAATGGATTACAATTATAACATTGACCAACATGATTACTCTGTTCGTTTGAAAGCTGCAAGGAGGTTTTTGAAGGATGGGGACAAGGTTAAAGTTATAGTGAACTTGAAAGGTCGTGAGAATGAGTTCAGAAATATAGCAATTGAGCTCATCAGACGTTTCCAGGATGAGATTGGGGAGCTTGCAACTGAAGAGGCCAAGAACTTCAGAGACAGGAATATATTTATTGTTCTAGTTCCTAACAAGGCTGTTCTACAGAAGGCTCAAGAACCCCCCAAGAAAAAGGACAATCCCGCCATAAATGAAGTTTCGGCTGGTGTT

Protein sequence

MAGLTSRFPFKPLLSQPSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNYNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV

Homology

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BLAST of MS007203 vs. NCBI nr
Match: XP_022158178.1 (translation initiation factor IF3-4, chloroplastic [Momordica charantia] >XP_022158179.1 translation initiation factor IF3-4, chloroplastic [Momordica charantia])

HSP 1 Score: 462.6 bits (1189), Expect = 2.2e-126
Identity = 260/292 (89.04%), Postives = 260/292 (89.04%), Query Frame = 0


Query: 1   MAGLTSRFPFKPLLSQPSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRL 60
           MAGLTSRFPFKPLLSQ SATTSSAAA SSSSSAAAAPPFRTSISPLPLSSSESNAFGFRL
Sbjct: 1   MAGLTSRFPFKPLLSQSSATTSSAAA-SSSSSAAAAPPFRTSISPLPLSSSESNAFGFRL 60

Query: 61  HNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDDFGLDVSAIRSNNVRLIDAQQ 120
           HNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDDFGLDVSAIRSNNVRLIDAQQ
Sbjct: 61  HNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDDFGLDVSAIRSNNVRLIDAQQ 120

Query: 121 NMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN-------------------- 180
           NMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN                    
Sbjct: 121 NMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAAT 180

Query: 181 ----------YNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ 240
                     YNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ
Sbjct: 181 RMDLKELKMGYNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ 240

Query: 241 DEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV 263
           DEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV
Sbjct: 241 DEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV 291

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BLAST of MS007203 vs. NCBI nr
Match: XP_038891171.1 (translation initiation factor IF3-4, chloroplastic [Benincasa hispida])

HSP 1 Score: 406.4 bits (1043), Expect = 1.9e-109
Identity = 234/298 (78.52%), Postives = 250/298 (83.89%), Query Frame = 0


Query: 1   MAGLTSRFPFKPLLSQ-PSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFR 60
           MAGL+ RFPFKPLLSQ  +ATT+SAAA++SSSSA    PFRTSI PLPLSSS++NAF FR
Sbjct: 1   MAGLSGRFPFKPLLSQSTTATTTSAAAATSSSSAT---PFRTSIRPLPLSSSKANAFKFR 60

Query: 61  LHNSNSLRLI----VSSPIRRSVFARFGGAPRSSGPADSKRSDDDFGLDVSAIRSNNVRL 120
           L  SNSLRL+    VSSPIR SVF+R+GGAPRSSGPADSKRSDD+FGLDVSAIRSNNVRL
Sbjct: 61  LRKSNSLRLVVSFPVSSPIRTSVFSRYGGAPRSSGPADSKRSDDEFGLDVSAIRSNNVRL 120

Query: 121 IDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN--------------- 180
           IDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN               
Sbjct: 121 IDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQK 180

Query: 181 ---------------YNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIEL 240
                          YNIDQHDYSVRL+AA++FLKDGDKVKVIVNLKGRENEFRNIAIEL
Sbjct: 181 KSAATRMDLKELKMGYNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIEL 240

Query: 241 IRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDNPAINEVSAGV 263
           IRRFQ+EIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE PPKKKD PA+NEVSAGV
Sbjct: 241 IRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEQPPKKKDKPAVNEVSAGV 295

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BLAST of MS007203 vs. NCBI nr
Match: XP_008452687.1 (PREDICTED: translation initiation factor IF-3 [Cucumis melo])

HSP 1 Score: 391.0 bits (1003), Expect = 8.3e-105
Identity = 228/300 (76.00%), Postives = 240/300 (80.00%), Query Frame = 0


Query: 1   MAGLTSRFPFKPLLSQPSA---TTSSAAASSSSSSAAAAPPFRTSISPLPLSSS-ESNAF 60
           MAGL+  FPFK LLSQ SA   TTS AAA +SSSS     PFRTS   LP+SSS  SNAF
Sbjct: 1   MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTT---PFRTSTPSLPISSSFNSNAF 60

Query: 61  GFRLHNSNSLRLI----VSSPIRRSVFARFGGAPRSSGPADSKRSDDDFGLDVSAIRSNN 120
             RLH SNSLRL+    VSSPIR SVFAR GGAPRSSGP DSKRS+D+FGLDVSAIRSNN
Sbjct: 61  KLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEFGLDVSAIRSNN 120

Query: 121 VRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN------------ 180
           VRLIDAQQNMVG+VSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN            
Sbjct: 121 VRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRG 180

Query: 181 ------------------YNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIA 240
                             YNIDQHDYSVRLKAA++FLKDGDKVKVIVNLKGRENEFRNIA
Sbjct: 181 QQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIA 240

Query: 241 IELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV 263
           IELIRRFQ+E+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD PA+NEVSAGV
Sbjct: 241 IELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV 297

[Close]

BLAST of MS007203 vs. NCBI nr
Match: XP_004144726.1 (translation initiation factor IF3-4, chloroplastic [Cucumis sativus] >KGN61058.1 hypothetical protein Csa_021304 [Cucumis sativus])

HSP 1 Score: 382.9 bits (982), Expect = 2.3e-102
Identity = 217/299 (72.58%), Postives = 239/299 (79.93%), Query Frame = 0


Query: 1   MAGLTSRFPFKPLLSQPSA---TTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFG 60
           MAGL+  FPFK LLSQ SA   TTSS++A+   +S+++  PFRTS   LP+SSS SNAF 
Sbjct: 1   MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFK 60

Query: 61  FRLHNSNSLRLI----VSSPIRRSVFARFGGAPRSSGPADSKRSDDDFGLDVSAIRSNNV 120
           FRLH SNSLRL+    VSSPIR SVFAR GGAPRSSGP DSKRS+D+ GLD+SAI+S NV
Sbjct: 61  FRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEIGLDISAIKSINV 120

Query: 121 RLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN------------- 180
           RLIDA+QNMVG+VSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYN             
Sbjct: 121 RLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQ 180

Query: 181 -----------------YNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAI 240
                            YNIDQHDYSVRLKAA++FLKDGDKVKVIVNLKGRENEFRNIAI
Sbjct: 181 QKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAI 240

Query: 241 ELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV 263
           ELIRRFQ+E+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD PA+N VSA V
Sbjct: 241 ELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVSASV 299

[Close]

BLAST of MS007203 vs. NCBI nr
Match: XP_022969585.1 (translation initiation factor IF3-4, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 374.0 bits (959), Expect = 1.0e-99
Identity = 209/292 (71.58%), Postives = 231/292 (79.11%), Query Frame = 0


Query: 1   MAGLTSRFPFKPLLSQPSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRL 60
           MAGLT RFPFKPLLS  SAT +++AA+ SSS+ A A P RTSISPLPLSSS+ NAF FR 
Sbjct: 1   MAGLTGRFPFKPLLSHSSATPTTSAAAPSSSATAIATPIRTSISPLPLSSSKFNAFRFRH 60

Query: 61  HNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDDFGLDVSAIRSNNVRLIDAQQ 120
           HNSNSL L+ ++  R +V +++GGA RSSGPADSKR DD  G+D+SAIRSN VRLIDAQQ
Sbjct: 61  HNSNSLHLVFTTSTRSTVVSQYGGASRSSGPADSKRFDDGLGVDISAIRSNTVRLIDAQQ 120

Query: 121 NMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN-------------------- 180
           NMVGIVSK QAIQMA+DAELDLVVLSPDADPPVVRIMDY+                    
Sbjct: 121 NMVGIVSKVQAIQMADDAELDLVVLSPDADPPVVRIMDYSKYRYEQQKKKRGQQKKSAAT 180

Query: 181 ----------YNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ 240
                     YNIDQHDYSVRLKAAR+FLKDGDKVKVIVNLKGREN F+NIAIELIRRFQ
Sbjct: 181 RMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENAFKNIAIELIRRFQ 240

Query: 241 DEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV 263
           +EIGELATEEAKN RDRN+FIVL PNKAVLQKAQEPPK KDN  +NEVSA V
Sbjct: 241 EEIGELATEEAKNLRDRNMFIVLAPNKAVLQKAQEPPKVKDNLVVNEVSASV 292

[Close]

BLAST of MS007203 vs. ExPASy Swiss-Prot
Match: Q94B52 (Translation initiation factor IF3-4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=IF3-4 PE=2 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 4.9e-60
Identity = 150/293 (51.19%), Postives = 178/293 (60.75%), Query Frame = 0


Query: 1   MAGLTSRFPFKPLLSQPSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRL 60
           MAG+TS   F  +L+  + T S    S         P F + +S  P       A   R 
Sbjct: 1   MAGITSTVGFNAILAGATKTVSHPVKSKLFGLRLCVPEF-SIVSLSPYHHRRCPAITCRY 60

Query: 61  HNSNSLRLIVSSPIRRSVFARFGGAPRSSGPAD----SKRSDDDFGLDVSAIRSNNVRLI 120
                                 GG   S  P D     K S+DD  LD+SAIRS  VRLI
Sbjct: 61  GG--------------------GGGGGSRFPGDRRGRQKESEDDDSLDISAIRSATVRLI 120

Query: 121 DAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN---------------- 180
           D QQNM+G+VSK +A++ AEDAELDLV+LSPDADPPVVR+MDY+                
Sbjct: 121 DDQQNMIGLVSKEEAVRRAEDAELDLVILSPDADPPVVRMMDYSKYRYEQQKRKKEQQKK 180

Query: 181 ------------YNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRR 240
                       YNIDQHDYSVR++AAR+FL+DGDKVKVIVN+KGRENEFRNIAIEL+RR
Sbjct: 181 TTRMDLKELKMGYNIDQHDYSVRMRAARKFLQDGDKVKVIVNMKGRENEFRNIAIELLRR 240

Query: 241 FQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDNPAINEVSA 261
           FQ EIGEL TEE+KNFRDRN+FIVLVPNK V++K QE PPKKK  PA ++VSA
Sbjct: 241 FQTEIGELGTEESKNFRDRNLFIVLVPNKEVIRKVQEPPPKKKKKPADDKVSA 272

[Close]

BLAST of MS007203 vs. ExPASy Swiss-Prot
Match: O82234 (Translation initiation factor IF3-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=IF3-2 PE=2 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 5.1e-57
Identity = 145/293 (49.49%), Postives = 182/293 (62.12%), Query Frame = 0


Query: 1   MAGLT-SRFPFKPLLSQPSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFR 60
           MAG+T S   F  + +  + T SS +  S  S   +    +T +S   L+ S   AF   
Sbjct: 1   MAGITSSTVGFNAVFTGITKTVSSHSLFSVDSKLCSLRLSKTELSFTNLTPSPRRAFAVT 60

Query: 61  LHNSNSLRLIVSSPIRRSVFARFGGAPRSSGP---ADSKRSDDDFGLDVSAIRSNNVRLI 120
                              F   GG  R SG       K ++ D  LD+S+IRS  VRLI
Sbjct: 61  CR-----------------FGGGGGGYRFSGDNRRGRPKEAEIDEALDISSIRSATVRLI 120

Query: 121 DAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN---------------- 180
           D QQNM+G+VSK +A++MA+DAELDLV+LSPDADPPVV++MDY+                
Sbjct: 121 DGQQNMLGLVSKDEAVRMADDAELDLVILSPDADPPVVKMMDYSKYRYEQQKRKKDQQKK 180

Query: 181 ------------YNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRR 240
                       YNIDQHDYSVRL+AA++FL+DGDKVKVIV++KGRENEFRNIAIEL+RR
Sbjct: 181 TTRMDLKELKMGYNIDQHDYSVRLRAAQKFLQDGDKVKVIVSMKGRENEFRNIAIELLRR 240

Query: 241 FQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDNPAINEVSA 261
           FQ EIGELATEE+KNFRDRN+FI+LVPNK +++K QEPP +KK   A NE SA
Sbjct: 241 FQTEIGELATEESKNFRDRNMFIILVPNKEMIRKPQEPPTRKKKKTAENEASA 276

[Close]

BLAST of MS007203 vs. ExPASy Swiss-Prot
Match: B0JKQ1 (Translation initiation factor IF-3 OS=Microcystis aeruginosa (strain NIES-843) OX=449447 GN=infC PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.6e-21
Identity = 62/174 (35.63%), Postives = 96/174 (55.17%), Query Frame = 0


Query: 93  DSKRSDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPP 152
           D +R+  D       IR   +R+ID+  + +GI++ A+A+++AE+ ELDLV++S  A PP
Sbjct: 3   DKRRTTRDLPQINERIRFPEIRVIDSDGSQLGIITPAEALRVAEEKELDLVLVSETASPP 62

Query: 153 VVRIMDY----------------------------NYNIDQHDYSVRLKAARRFLKDGDK 212
           V RIMDY                             Y ID+HDY+VR+  A+RFLK GDK
Sbjct: 63  VCRIMDYGKYKFEQEKKAREAKKKQHTADIKEVKMRYKIDEHDYNVRVNQAQRFLKAGDK 122

Query: 213 VKVIVNLKGRENEFRNIAIELIRRFQDEIGELA-TEEAKNFRDRNIFIVLVPNK 238
           VK  +  +GRE +  N+A EL+ R   ++ ++A  ++A     RN+ ++L P K
Sbjct: 123 VKATITFRGREIQHSNLAEELLARMAKDLQDVAEVQQAPKKEGRNMMMMLSPKK 176

[Close]

BLAST of MS007203 vs. ExPASy Swiss-Prot
Match: Q8R9C2 (Translation initiation factor IF-3 OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) OX=273068 GN=infC PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.7e-20
Identity = 59/159 (37.11%), Postives = 90/159 (56.60%), Query Frame = 0


Query: 108 IRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMD---YNY--- 167
           IR   VRLID     +GI+S  +A ++A++  LDLV + P+A+PPV ++MD   Y Y   
Sbjct: 21  IRDKEVRLIDQDGKQIGIMSAKEAYKIAQERHLDLVKIVPNANPPVCKLMDFGKYRYELS 80

Query: 168 ----------------------NIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFR 227
                                 NI+ HD+ V+LK+A +FLKDGDKVKV +  +GRE    
Sbjct: 81  KREKEAKKKQKIINVKEIRMSPNIEDHDFGVKLKSAIKFLKDGDKVKVTIRFRGREAAHT 140

Query: 228 NIAIELIRRFQDEIGELA-TEEAKNFRDRNIFIVLVPNK 238
           ++A +L++RF +E+ E    E+A +   RN+ +V+ P K
Sbjct: 141 SLAEDLLKRFAEELREYGNVEKAPSMDGRNMMMVIAPKK 179

[Close]

BLAST of MS007203 vs. ExPASy Swiss-Prot
Match: Q0IDZ5 (Translation initiation factor IF-3 OS=Synechococcus sp. (strain CC9311) OX=64471 GN=infC PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.7e-20
Identity = 65/174 (37.36%), Postives = 92/174 (52.87%), Query Frame = 0


Query: 113 VRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDY------------- 172
           +R++DA    +G++ + QA+++A + ELDLV++S  ADPPV RIMDY             
Sbjct: 28  LRVVDADGEQLGVIDREQALEVARERELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKE 87

Query: 173 ---------------NYNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIE 232
                           Y IDQHDY VR+  A+RFLK GDKVK  V  +GRE +   +A  
Sbjct: 88  AKKKSHQTEVKEVKMRYKIDQHDYDVRIGQAQRFLKAGDKVKCTVIFRGREIQHTALAEV 147

Query: 233 LIRRFQDEIGELATEEAKNFRD-RNIFIVLVPNKAVLQKAQEPPKKKDNPAINE 258
           L+RR   ++ E A  +    R+ RN+ + L P KA L K     K KD   +N+
Sbjct: 148 LLRRMAKDLEEPAEVQQPPKREGRNMIMFLTPRKAPLVK-----KDKDEEVVNK 196

[Close]

BLAST of MS007203 vs. ExPASy TrEMBL
Match: A0A6J1DYM5 (Translation initiation factor IF-3 OS=Momordica charantia OX=3673 GN=LOC111024717 PE=3 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 1.1e-126
Identity = 260/292 (89.04%), Postives = 260/292 (89.04%), Query Frame = 0


Query: 1   MAGLTSRFPFKPLLSQPSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRL 60
           MAGLTSRFPFKPLLSQ SATTSSAAA SSSSSAAAAPPFRTSISPLPLSSSESNAFGFRL
Sbjct: 1   MAGLTSRFPFKPLLSQSSATTSSAAA-SSSSSAAAAPPFRTSISPLPLSSSESNAFGFRL 60

Query: 61  HNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDDFGLDVSAIRSNNVRLIDAQQ 120
           HNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDDFGLDVSAIRSNNVRLIDAQQ
Sbjct: 61  HNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDDFGLDVSAIRSNNVRLIDAQQ 120

Query: 121 NMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN-------------------- 180
           NMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN                    
Sbjct: 121 NMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAAT 180

Query: 181 ----------YNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ 240
                     YNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ
Sbjct: 181 RMDLKELKMGYNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ 240

Query: 241 DEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV 263
           DEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV
Sbjct: 241 DEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV 291

[Close]

BLAST of MS007203 vs. ExPASy TrEMBL
Match: A0A1S3BV82 (Translation initiation factor IF-3 OS=Cucumis melo OX=3656 GN=LOC103493630 PE=3 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 4.0e-105
Identity = 228/300 (76.00%), Postives = 240/300 (80.00%), Query Frame = 0


Query: 1   MAGLTSRFPFKPLLSQPSA---TTSSAAASSSSSSAAAAPPFRTSISPLPLSSS-ESNAF 60
           MAGL+  FPFK LLSQ SA   TTS AAA +SSSS     PFRTS   LP+SSS  SNAF
Sbjct: 1   MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTT---PFRTSTPSLPISSSFNSNAF 60

Query: 61  GFRLHNSNSLRLI----VSSPIRRSVFARFGGAPRSSGPADSKRSDDDFGLDVSAIRSNN 120
             RLH SNSLRL+    VSSPIR SVFAR GGAPRSSGP DSKRS+D+FGLDVSAIRSNN
Sbjct: 61  KLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEFGLDVSAIRSNN 120

Query: 121 VRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN------------ 180
           VRLIDAQQNMVG+VSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN            
Sbjct: 121 VRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRG 180

Query: 181 ------------------YNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIA 240
                             YNIDQHDYSVRLKAA++FLKDGDKVKVIVNLKGRENEFRNIA
Sbjct: 181 QQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIA 240

Query: 241 IELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV 263
           IELIRRFQ+E+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD PA+NEVSAGV
Sbjct: 241 IELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV 297

[Close]

BLAST of MS007203 vs. ExPASy TrEMBL
Match: A0A0A0LH34 (Translation initiation factor IF-3 OS=Cucumis sativus OX=3659 GN=Csa_2G036070 PE=3 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 1.1e-102
Identity = 217/299 (72.58%), Postives = 239/299 (79.93%), Query Frame = 0


Query: 1   MAGLTSRFPFKPLLSQPSA---TTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFG 60
           MAGL+  FPFK LLSQ SA   TTSS++A+   +S+++  PFRTS   LP+SSS SNAF 
Sbjct: 1   MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFK 60

Query: 61  FRLHNSNSLRLI----VSSPIRRSVFARFGGAPRSSGPADSKRSDDDFGLDVSAIRSNNV 120
           FRLH SNSLRL+    VSSPIR SVFAR GGAPRSSGP DSKRS+D+ GLD+SAI+S NV
Sbjct: 61  FRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEIGLDISAIKSINV 120

Query: 121 RLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN------------- 180
           RLIDA+QNMVG+VSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYN             
Sbjct: 121 RLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQ 180

Query: 181 -----------------YNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAI 240
                            YNIDQHDYSVRLKAA++FLKDGDKVKVIVNLKGRENEFRNIAI
Sbjct: 181 QKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAI 240

Query: 241 ELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV 263
           ELIRRFQ+E+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD PA+N VSA V
Sbjct: 241 ELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVSASV 299

[Close]

BLAST of MS007203 vs. ExPASy TrEMBL
Match: A0A6J1I0C0 (Translation initiation factor IF-3 OS=Cucurbita maxima OX=3661 GN=LOC111468564 PE=3 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 5.1e-100
Identity = 209/292 (71.58%), Postives = 231/292 (79.11%), Query Frame = 0


Query: 1   MAGLTSRFPFKPLLSQPSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRL 60
           MAGLT RFPFKPLLS  SAT +++AA+ SSS+ A A P RTSISPLPLSSS+ NAF FR 
Sbjct: 1   MAGLTGRFPFKPLLSHSSATPTTSAAAPSSSATAIATPIRTSISPLPLSSSKFNAFRFRH 60

Query: 61  HNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDDFGLDVSAIRSNNVRLIDAQQ 120
           HNSNSL L+ ++  R +V +++GGA RSSGPADSKR DD  G+D+SAIRSN VRLIDAQQ
Sbjct: 61  HNSNSLHLVFTTSTRSTVVSQYGGASRSSGPADSKRFDDGLGVDISAIRSNTVRLIDAQQ 120

Query: 121 NMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN-------------------- 180
           NMVGIVSK QAIQMA+DAELDLVVLSPDADPPVVRIMDY+                    
Sbjct: 121 NMVGIVSKVQAIQMADDAELDLVVLSPDADPPVVRIMDYSKYRYEQQKKKRGQQKKSAAT 180

Query: 181 ----------YNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ 240
                     YNIDQHDYSVRLKAAR+FLKDGDKVKVIVNLKGREN F+NIAIELIRRFQ
Sbjct: 181 RMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENAFKNIAIELIRRFQ 240

Query: 241 DEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV 263
           +EIGELATEEAKN RDRN+FIVL PNKAVLQKAQEPPK KDN  +NEVSA V
Sbjct: 241 EEIGELATEEAKNLRDRNMFIVLAPNKAVLQKAQEPPKVKDNLVVNEVSASV 292

[Close]

BLAST of MS007203 vs. ExPASy TrEMBL
Match: A0A6J1G3Y5 (Translation initiation factor IF-3 OS=Cucurbita moschata OX=3662 GN=LOC111450575 PE=3 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 1.1e-99
Identity = 212/293 (72.35%), Postives = 234/293 (79.86%), Query Frame = 0


Query: 1   MAGLTSRFPFKPLLSQPSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRL 60
           MAGL+ RFPFK + SQ SAT ++   +SSSSSA    PFRTSI PLPL SS+SNAF FRL
Sbjct: 1   MAGLSGRFPFKSISSQSSATATATTTTSSSSSAT---PFRTSIFPLPLPSSKSNAFRFRL 60

Query: 61  HNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDDFGLDVSAIRSNNVRLIDAQQ 120
           HNSNSLRL VSSPIR SVFAR+GGAPRSSGPA SKRS+D   LDVS+IRSNNVRLID QQ
Sbjct: 61  HNSNSLRL-VSSPIRTSVFARYGGAPRSSGPAGSKRSEDSLALDVSSIRSNNVRLIDEQQ 120

Query: 121 NMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN-------------------- 180
           NMVGIV K+QAIQMAEDAELDLVVLSPDADPPVVRIMDY+                    
Sbjct: 121 NMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAAT 180

Query: 181 ----------YNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ 240
                     Y IDQHDYSVRL+AA++FL+DGDKVKVIVNLKGRENEFR IAIEL++RFQ
Sbjct: 181 RMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQ 240

Query: 241 DEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNP-AINEVSAGV 263
           +E+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKD P A+NEVSA V
Sbjct: 241 EELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARV 289

[Close]

BLAST of MS007203 vs. TAIR 10
Match: AT4G30690.2 (Translation initiation factor 3 protein )

HSP 1 Score: 247.7 bits (631), Expect = 1.1e-65
Identity = 150/265 (56.60%), Postives = 178/265 (67.17%), Query Frame = 0


Query: 1   MAGLTSRFPFKPLLSQPSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRL 60
           MAG+TS   F  +L+  + T S    S         P F + +S  P       A   R 
Sbjct: 1   MAGITSTVGFNAILAGATKTVSHPVKSKLFGLRLCVPEF-SIVSLSPYHHRRCPAITCRY 60

Query: 61  HNSNSLRLIVSSPIRRSVFARFGGAPRSSGPAD----SKRSDDDFGLDVSAIRSNNVRLI 120
                                 GG   S  P D     K S+DD  LD+SAIRS  VRLI
Sbjct: 61  GG--------------------GGGGGSRFPGDRRGRQKESEDDDSLDISAIRSATVRLI 120

Query: 121 DAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNYNIDQHDYSVRLKAAR 180
           D QQNM+G+VSK +A++ AEDAELDLV+LSPDADPPVVR+MDY+YNIDQHDYSVR++AAR
Sbjct: 121 DDQQNMIGLVSKEEAVRRAEDAELDLVILSPDADPPVVRMMDYSYNIDQHDYSVRMRAAR 180

Query: 181 RFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPN 240
           +FL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ EIGEL TEE+KNFRDRN+FIVLVPN
Sbjct: 181 KFLQDGDKVKVIVNMKGRENEFRNIAIELLRRFQTEIGELGTEESKNFRDRNLFIVLVPN 240

Query: 241 KAVLQKAQE-PPKKKDNPAINEVSA 261
           K V++K QE PPKKK  PA ++VSA
Sbjct: 241 KEVIRKVQEPPPKKKKKPADDKVSA 244

[Close]

BLAST of MS007203 vs. TAIR 10
Match: AT4G30690.1 (Translation initiation factor 3 protein )

HSP 1 Score: 232.6 bits (592), Expect = 3.5e-61
Identity = 150/293 (51.19%), Postives = 178/293 (60.75%), Query Frame = 0


Query: 1   MAGLTSRFPFKPLLSQPSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRL 60
           MAG+TS   F  +L+  + T S    S         P F + +S  P       A   R 
Sbjct: 1   MAGITSTVGFNAILAGATKTVSHPVKSKLFGLRLCVPEF-SIVSLSPYHHRRCPAITCRY 60

Query: 61  HNSNSLRLIVSSPIRRSVFARFGGAPRSSGPAD----SKRSDDDFGLDVSAIRSNNVRLI 120
                                 GG   S  P D     K S+DD  LD+SAIRS  VRLI
Sbjct: 61  GG--------------------GGGGGSRFPGDRRGRQKESEDDDSLDISAIRSATVRLI 120

Query: 121 DAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN---------------- 180
           D QQNM+G+VSK +A++ AEDAELDLV+LSPDADPPVVR+MDY+                
Sbjct: 121 DDQQNMIGLVSKEEAVRRAEDAELDLVILSPDADPPVVRMMDYSKYRYEQQKRKKEQQKK 180

Query: 181 ------------YNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRR 240
                       YNIDQHDYSVR++AAR+FL+DGDKVKVIVN+KGRENEFRNIAIEL+RR
Sbjct: 181 TTRMDLKELKMGYNIDQHDYSVRMRAARKFLQDGDKVKVIVNMKGRENEFRNIAIELLRR 240

Query: 241 FQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDNPAINEVSA 261
           FQ EIGEL TEE+KNFRDRN+FIVLVPNK V++K QE PPKKK  PA ++VSA
Sbjct: 241 FQTEIGELGTEESKNFRDRNLFIVLVPNKEVIRKVQEPPPKKKKKPADDKVSA 272

[Close]

BLAST of MS007203 vs. TAIR 10
Match: AT2G24060.1 (Translation initiation factor 3 protein )

HSP 1 Score: 222.6 bits (566), Expect = 3.6e-58
Identity = 145/293 (49.49%), Postives = 182/293 (62.12%), Query Frame = 0


Query: 1   MAGLT-SRFPFKPLLSQPSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFR 60
           MAG+T S   F  + +  + T SS +  S  S   +    +T +S   L+ S   AF   
Sbjct: 1   MAGITSSTVGFNAVFTGITKTVSSHSLFSVDSKLCSLRLSKTELSFTNLTPSPRRAFAVT 60

Query: 61  LHNSNSLRLIVSSPIRRSVFARFGGAPRSSGP---ADSKRSDDDFGLDVSAIRSNNVRLI 120
                              F   GG  R SG       K ++ D  LD+S+IRS  VRLI
Sbjct: 61  CR-----------------FGGGGGGYRFSGDNRRGRPKEAEIDEALDISSIRSATVRLI 120

Query: 121 DAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN---------------- 180
           D QQNM+G+VSK +A++MA+DAELDLV+LSPDADPPVV++MDY+                
Sbjct: 121 DGQQNMLGLVSKDEAVRMADDAELDLVILSPDADPPVVKMMDYSKYRYEQQKRKKDQQKK 180

Query: 181 ------------YNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRR 240
                       YNIDQHDYSVRL+AA++FL+DGDKVKVIV++KGRENEFRNIAIEL+RR
Sbjct: 181 TTRMDLKELKMGYNIDQHDYSVRLRAAQKFLQDGDKVKVIVSMKGRENEFRNIAIELLRR 240

Query: 241 FQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDNPAINEVSA 261
           FQ EIGELATEE+KNFRDRN+FI+LVPNK +++K QEPP +KK   A NE SA
Sbjct: 241 FQTEIGELATEESKNFRDRNMFIILVPNKEMIRKPQEPPTRKKKKTAENEASA 276

The following BLAST results are available for this feature:

BLAST of MS007203 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158178.1	2.2e-126	89.04	translation initiation factor IF3-4, chloroplastic [Momordica charantia] >XP_022...	[more]
XP_038891171.1	1.9e-109	78.52	translation initiation factor IF3-4, chloroplastic [Benincasa hispida]	[more]
XP_008452687.1	8.3e-105	76.00	PREDICTED: translation initiation factor IF-3 [Cucumis melo]	[more]
XP_004144726.1	2.3e-102	72.58	translation initiation factor IF3-4, chloroplastic [Cucumis sativus] >KGN61058.1...	[more]
XP_022969585.1	1.0e-99	71.58	translation initiation factor IF3-4, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of MS007203 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94B52	4.9e-60	51.19	Translation initiation factor IF3-4, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]
O82234	5.1e-57	49.49	Translation initiation factor IF3-2, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]
B0JKQ1	1.6e-21	35.63	Translation initiation factor IF-3 OS=Microcystis aeruginosa (strain NIES-843) O...	[more]
Q8R9C2	1.7e-20	37.11	Translation initiation factor IF-3 OS=Caldanaerobacter subterraneus subsp. tengc...	[more]
Q0IDZ5	1.7e-20	37.36	Translation initiation factor IF-3 OS=Synechococcus sp. (strain CC9311) OX=64471...	[more]

BLAST of MS007203 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DYM5	1.1e-126	89.04	Translation initiation factor IF-3 OS=Momordica charantia OX=3673 GN=LOC11102471...	[more]
A0A1S3BV82	4.0e-105	76.00	Translation initiation factor IF-3 OS=Cucumis melo OX=3656 GN=LOC103493630 PE=3 ...	[more]
A0A0A0LH34	1.1e-102	72.58	Translation initiation factor IF-3 OS=Cucumis sativus OX=3659 GN=Csa_2G036070 PE...	[more]
A0A6J1I0C0	5.1e-100	71.58	Translation initiation factor IF-3 OS=Cucurbita maxima OX=3661 GN=LOC111468564 P...	[more]
A0A6J1G3Y5	1.1e-99	72.35	Translation initiation factor IF-3 OS=Cucurbita moschata OX=3662 GN=LOC111450575...	[more]

BLAST of MS007203 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30690.2	1.1e-65	56.60	Translation initiation factor 3 protein	[more]
AT4G30690.1	3.5e-61	51.19	Translation initiation factor 3 protein	[more]
AT2G24060.1	3.6e-58	49.49	Translation initiation factor 3 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019815	Translation initiation factor 3, C-terminal	PFAM	PF00707	IF3_C	coord: 160..236 e-value: 9.9E-20 score: 70.3
IPR019814	Translation initiation factor 3, N-terminal	PFAM	PF05198	IF3_N	coord: 107..160 e-value: 6.4E-19 score: 68.0
IPR036788	Translation initiation factor 3 (IF-3), C-terminal domain superfamily	GENE3D	3.30.110.10		coord: 149..238 e-value: 1.6E-20 score: 75.0
IPR036788	Translation initiation factor 3 (IF-3), C-terminal domain superfamily	SUPERFAMILY	55200	Translation initiation factor IF3, C-terminal domain	coord: 155..237
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 243..262
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	PANTHER	PTHR10938:SF3	TRANSLATION INITIATION FACTOR IF3-2, CHLOROPLASTIC	coord: 45..160
None	No IPR available	PANTHER	PTHR10938:SF3	TRANSLATION INITIATION FACTOR IF3-2, CHLOROPLASTIC	coord: 160..253
IPR001288	Translation initiation factor 3	PANTHER	PTHR10938	TRANSLATION INITIATION FACTOR IF-3	coord: 45..160
IPR001288	Translation initiation factor 3	PANTHER	PTHR10938	TRANSLATION INITIATION FACTOR IF-3	coord: 160..253
IPR036787	Translation initiation factor 3 (IF-3), N-terminal domain superfamily	SUPERFAMILY	54364	Translation initiation factor IF3, N-terminal domain	coord: 107..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS007203.1	MS007203.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
molecular_function	GO:0003743	translation initiation factor activity