MS007162 (gene) Bitter gourd (TR) v1

Overview
NameMS007162
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontranscription factor MYB36-like
Locationscaffold25: 1048197 .. 1048879 (-)
RNA-Seq ExpressionMS007162
SyntenyMS007162
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGCGAGCAGCATGCTGTGACAAAGATAAGGTGAAGAAAGGAGCGTGGTCAGCTGAGGAAGATGAGAAGCTCAAGGCTTATATCCAACGCTATGGAACTGGAGGCAACTGGATTGCTCTTCCCAACAAAATAGGTCCAAACCAAACTAATATCTTCTCTTCTAACTCCAAACTAAAGGGTTGTTGAATTTATTTTATTACAGGGCTGAAGAGATGTGGGAAGAGTTGCAGGCTTCGATGGCTCAATTATCTGAGACCAAATATCAAACATGGCGGATTCTCTCAAGAGGAAGACAATATCATCTGCAACCTCTTCATAAGCATTGGCACCAGGTCTCTCTTTCCAAATATGTTTCTAAGCTATGCCTACGTCCACTTTCTTGAATTTTGAAAACTGAAATATTTGCTTTCAGGTGGTCTATAATTGCAGCCCAATTGCCTGGAAGAACAGACAACGACATAAAGAATTACTGGAACACGAAGTTGAAGAAGAAACTGCTCGGAACTCCAAAACACTCCTCTAACGTCAACAAGTTACCGTCCAACTCCAACTCCACCATGGAAAGGCTTCAGCTCCAAATGCAGCTTCAAGGCCTTCATAACTCCTACTCTGTCTACAACGCTGCGGCGCTCTGGCCAACCGTGTCCACTGGTGAGGAAGCTAAGGTGGTAACAGGACAA

mRNA sequence

ATGGGGCGAGCAGCATGCTGTGACAAAGATAAGGTGAAGAAAGGAGCGTGGTCAGCTGAGGAAGATGAGAAGCTCAAGGCTTATATCCAACGCTATGGAACTGGAGGCAACTGGATTGCTCTTCCCAACAAAATAGGGCTGAAGAGATGTGGGAAGAGTTGCAGGCTTCGATGGCTCAATTATCTGAGACCAAATATCAAACATGGCGGATTCTCTCAAGAGGAAGACAATATCATCTGCAACCTCTTCATAAGCATTGGCACCAGGTGGTCTATAATTGCAGCCCAATTGCCTGGAAGAACAGACAACGACATAAAGAATTACTGGAACACGAAGTTGAAGAAGAAACTGCTCGGAACTCCAAAACACTCCTCTAACGTCAACAAGTTACCGTCCAACTCCAACTCCACCATGGAAAGGCTTCAGCTCCAAATGCAGCTTCAAGGCCTTCATAACTCCTACTCTGTCTACAACGCTGCGGCGCTCTGGCCAACCGTGTCCACTGGTGAGGAAGCTAAGGTGGTAACAGGACAA

Coding sequence (CDS)

ATGGGGCGAGCAGCATGCTGTGACAAAGATAAGGTGAAGAAAGGAGCGTGGTCAGCTGAGGAAGATGAGAAGCTCAAGGCTTATATCCAACGCTATGGAACTGGAGGCAACTGGATTGCTCTTCCCAACAAAATAGGGCTGAAGAGATGTGGGAAGAGTTGCAGGCTTCGATGGCTCAATTATCTGAGACCAAATATCAAACATGGCGGATTCTCTCAAGAGGAAGACAATATCATCTGCAACCTCTTCATAAGCATTGGCACCAGGTGGTCTATAATTGCAGCCCAATTGCCTGGAAGAACAGACAACGACATAAAGAATTACTGGAACACGAAGTTGAAGAAGAAACTGCTCGGAACTCCAAAACACTCCTCTAACGTCAACAAGTTACCGTCCAACTCCAACTCCACCATGGAAAGGCTTCAGCTCCAAATGCAGCTTCAAGGCCTTCATAACTCCTACTCTGTCTACAACGCTGCGGCGCTCTGGCCAACCGTGTCCACTGGTGAGGAAGCTAAGGTGGTAACAGGACAA

Protein sequence

MGRAACCDKDKVKKGAWSAEEDEKLKAYIQRYGTGGNWIALPNKIGLKRCGKSCRLRWLNYLRPNIKHGGFSQEEDNIICNLFISIGTRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGTPKHSSNVNKLPSNSNSTMERLQLQMQLQGLHNSYSVYNAAALWPTVSTGEEAKVVTGQ
Homology
BLAST of MS007162 vs. NCBI nr
Match: XP_022153349.1 (transcription factor MYB36-like [Momordica charantia])

HSP 1 Score: 370.2 bits (949), Expect = 1.0e-98
Identity = 175/178 (98.31%), Postives = 177/178 (99.44%), Query Frame = 0

Query: 1   MGRAACCDKDKVKKGAWSAEEDEKLKAYIQRYGTGGNWIALPNKIGLKRCGKSCRLRWLN 60
           MGRAACCDKDKVKKGAWSAEEDEKLKAYIQ YGTGGNWIALPNKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAACCDKDKVKKGAWSAEEDEKLKAYIQHYGTGGNWIALPNKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSQEEDNIICNLFISIGTRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGT 120
           YL+PNIKHGGFSQEEDNIICNLFISIGTRWSIIAAQLPGRTDND+KNYWNTKLKKKLLGT
Sbjct: 61  YLKPNIKHGGFSQEEDNIICNLFISIGTRWSIIAAQLPGRTDNDVKNYWNTKLKKKLLGT 120

Query: 121 PKHSSNVNKLPSNSNSTMERLQLQMQLQGLHNSYSVYNAAALWPTVSTGEEAKVVTGQ 179
           PKHSSNVNKLPSNSNSTMERLQLQMQLQGLHNSYSVYNAAALWPTVSTGEEAKVVTGQ
Sbjct: 121 PKHSSNVNKLPSNSNSTMERLQLQMQLQGLHNSYSVYNAAALWPTVSTGEEAKVVTGQ 178

BLAST of MS007162 vs. NCBI nr
Match: XP_022965905.1 (transcription factor MYB36-like [Cucurbita maxima])

HSP 1 Score: 280.8 bits (717), Expect = 8.2e-72
Identity = 133/178 (74.72%), Postives = 149/178 (83.71%), Query Frame = 0

Query: 1   MGRAACCDKDKVKKGAWSAEEDEKLKAYIQRYGTGGNWIALPNKIGLKRCGKSCRLRWLN 60
           MGRA CCDKD VKKG WS EEDEKLKAYIQ +GTGGNWIALPNKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSQEEDNIICNLFISIGTRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGT 120
           YLRPNIKHGGFS+EED+IIC LFISIG+RWSIIAAQLPGRTDNDIKNYWNT+LKKKLLGT
Sbjct: 61  YLRPNIKHGGFSEEEDDIICKLFISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGT 120

Query: 121 PKHSSNVNKLPSNSNSTMERLQLQMQLQGLHNSYSVYNAAALWPTVSTGEEAKVVTGQ 179
           PKH S+     + ++S MERLQLQ QLQG   ++S  + + LWP VS   +  +V G+
Sbjct: 121 PKHVSSRKTAQTVTSSAMERLQLQKQLQGFQTAFSFDSTSTLWPPVSA--DGSLVNGE 176

BLAST of MS007162 vs. NCBI nr
Match: XP_022938000.1 (transcription factor MYB36-like [Cucurbita moschata])

HSP 1 Score: 279.3 bits (713), Expect = 2.4e-71
Identity = 130/167 (77.84%), Postives = 144/167 (86.23%), Query Frame = 0

Query: 1   MGRAACCDKDKVKKGAWSAEEDEKLKAYIQRYGTGGNWIALPNKIGLKRCGKSCRLRWLN 60
           MGRA CCDKD VKKG WS EEDEKLKAYIQ +GTGGNWIALPNKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSQEEDNIICNLFISIGTRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGT 120
           YLRPNIKHGGFS+EED+IIC LF+SIG+RWSIIAAQLPGRTDNDIKNYWNT+LKKKLLGT
Sbjct: 61  YLRPNIKHGGFSEEEDDIICKLFVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGT 120

Query: 121 PKHSSNVNKLPSNSNSTMERLQLQMQLQGLHNSYSVYNAAALWPTVS 168
           PKH S+     + ++S MERLQLQ QLQG   ++S  + + LWP VS
Sbjct: 121 PKHVSSRKTAQTVTSSAMERLQLQKQLQGFQTAFSFDSTSMLWPPVS 167

BLAST of MS007162 vs. NCBI nr
Match: XP_038890909.1 (transcription factor MYB36-like [Benincasa hispida])

HSP 1 Score: 279.3 bits (713), Expect = 2.4e-71
Identity = 138/190 (72.63%), Postives = 151/190 (79.47%), Query Frame = 0

Query: 1   MGRAACCDKDKVKKGAWSAEEDEKLKAYIQRYGTGGNWIALPNKIGLKRCGKSCRLRWLN 60
           MGRA CCDK+KVKKG WS EEDEKLKAYIQ +GT GNWIALP KIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKEKVKKGPWSPEEDEKLKAYIQLHGTAGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSQEEDNIICNLFISIGTRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGT 120
           YLRPNIKHGGFS+EED IIC LFISIG+RWSIIAAQLPGRTDNDIKNYWNT+LKKKLLG 
Sbjct: 61  YLRPNIKHGGFSEEEDKIICGLFISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGA 120

Query: 121 PK-HSSNVNKLPSNS-----------NSTMERLQLQMQLQGLHNSYSVYNAAALWPTVST 179
           PK + SN+NKL S+S           NS +ERLQLQMQLQ L + +S  N + LWP +S 
Sbjct: 121 PKQYLSNINKLSSHSDSRDSTTQPLTNSAIERLQLQMQLQALQSPFSFSNISTLWPPMSV 180

BLAST of MS007162 vs. NCBI nr
Match: XP_023537976.1 (transcription factor MYB36-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 277.3 bits (708), Expect = 9.1e-71
Identity = 131/178 (73.60%), Postives = 148/178 (83.15%), Query Frame = 0

Query: 1   MGRAACCDKDKVKKGAWSAEEDEKLKAYIQRYGTGGNWIALPNKIGLKRCGKSCRLRWLN 60
           MGRA CCDKD VKKG WS EEDEKLKAYIQ +GTGGNWIALPNKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSQEEDNIICNLFISIGTRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGT 120
           YLRPNIKHGGFS+EED+IIC LF+SIG+RWSIIAAQLPGRTDNDIKNYWNT+LKKKLLGT
Sbjct: 61  YLRPNIKHGGFSEEEDDIICKLFVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGT 120

Query: 121 PKHSSNVNKLPSNSNSTMERLQLQMQLQGLHNSYSVYNAAALWPTVSTGEEAKVVTGQ 179
           PK  S+     + ++S MERLQLQ QLQG   ++S  + + LWP VS   +  +V G+
Sbjct: 121 PKRVSSRKTAQTVTSSVMERLQLQKQLQGFQTAFSFDSTSTLWPPVSA--DGSLVNGE 176

BLAST of MS007162 vs. ExPASy Swiss-Prot
Match: Q9FKL2 (Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 1.4e-66
Identity = 128/182 (70.33%), Postives = 138/182 (75.82%), Query Frame = 0

Query: 1   MGRAACCDKDKVKKGAWSAEEDEKLKAYIQRYGTGGNWIALPNKIGLKRCGKSCRLRWLN 60
           MGRA CCDK  VKKG WS EED KLK YI +YGTGGNWIALP KIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSQEEDNIICNLFISIGTRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGT 120
           YLRPNIKHGGFS+EED II +L+ISIG+RWSIIAAQLPGRTDNDIKNYWNTKLKKKLLG 
Sbjct: 61  YLRPNIKHGGFSEEEDRIILSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGR 120

Query: 121 PKH----------------SSNVNKLPSN-SNSTMERLQLQMQLQGLHNSY-SVYNAAAL 165
            K                 ++N NK P N SNS +ERLQL MQLQ L + + S YN   L
Sbjct: 121 QKQMNRQDSITDSTENNLSNNNNNKSPQNLSNSALERLQLHMQLQNLQSPFSSFYNNPIL 180

BLAST of MS007162 vs. ExPASy Swiss-Prot
Match: Q9M2Y9 (Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.2e-57
Identity = 106/166 (63.86%), Postives = 125/166 (75.30%), Query Frame = 0

Query: 1   MGRAACCDKDKVKKGAWSAEEDEKLKAYIQRYGTGGNWIALPNKIGLKRCGKSCRLRWLN 60
           MGRA CCDK  VKKG WS EED KLK+YI+  GTGGNWIALP KIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSQEEDNIICNLFISIGTRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGT 120
           YLRPNIKHGGFS+EE+NIIC+L+++IG+RWSIIAAQLPGRTDNDIKNYWNT+LKKKL+  
Sbjct: 61  YLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLIN- 120

Query: 121 PKHSSNVNKLPSNSNSTMERLQLQMQLQGLHNSYSVYNAAAL--WP 165
            K    + +        M  ++ Q Q Q +  S+ +     +  WP
Sbjct: 121 -KQRKELQEACMEQQEMMVMMKRQHQQQQIQTSFMMRQDQTMFTWP 164

BLAST of MS007162 vs. ExPASy Swiss-Prot
Match: F4JSU0 (Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 8.0e-54
Identity = 98/158 (62.03%), Postives = 118/158 (74.68%), Query Frame = 0

Query: 1   MGRAACCDKDKVKKGAWSAEEDEKLKAYIQRYGTGGNWIALPNKIGLKRCGKSCRLRWLN 60
           MGRA CCDK  VKKG WS EED  LK+YI+++GTG NWI+LP +IG+KRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKMAVKKGPWSTEEDAVLKSYIEKHGTGNNWISLPQRIGIKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSQEEDNIICNLFISIGTRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGT 120
           YLRPN+KHGGF+ EED IIC+L+I+IG+RWSIIA+QLPGRTDNDIKNYWNT+LKKKLL  
Sbjct: 61  YLRPNLKHGGFTDEEDYIICSLYITIGSRWSIIASQLPGRTDNDIKNYWNTRLKKKLLSK 120

Query: 121 PKHSSNVNKLPSNSNSTMERLQLQMQLQGLHNSYSVYN 159
              + +          T      Q Q+Q  H+  +  N
Sbjct: 121 QGKAFHQQLNVKFERGTTSSSSSQNQIQIFHDENTKSN 158

BLAST of MS007162 vs. ExPASy Swiss-Prot
Match: Q9FG68 (Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 8.0e-54
Identity = 94/126 (74.60%), Postives = 107/126 (84.92%), Query Frame = 0

Query: 1   MGRAACCDKDKVKKGAWSAEEDEKLKAYIQRYGTGGNWIALPNKIGLKRCGKSCRLRWLN 60
           MGRA CCDK KVK+G WS EED KL+ YI++YG GGNWI+ P K GL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSQEEDNIICNLFISIGTRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGT 120
           YLRPNIKHG FS+EED II +LF +IG+RWSIIAA LPGRTDNDIKNYWNTKL+KKLL +
Sbjct: 61  YLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWNTKLRKKLLSS 120

Query: 121 PKHSSN 127
              SS+
Sbjct: 121 SSDSSS 126

BLAST of MS007162 vs. ExPASy Swiss-Prot
Match: Q9SJL7 (Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 3.0e-53
Identity = 99/144 (68.75%), Postives = 116/144 (80.56%), Query Frame = 0

Query: 1   MGRAACCDKDKVKKGAWSAEEDEKLKAYIQRYGTGGNWIALPNKIGLKRCGKSCRLRWLN 60
           MGRA CCDK  VK+G WS EED KLK YI++ GTGGNWIALP+K GL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSQEEDNIICNLFISIGTRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGT 120
           YLRPNI+HG F++EEDNII +LF SIG+RWS+IAA L GRTDNDIKNYWNTKLKKKL+ T
Sbjct: 61  YLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWNTKLKKKLIAT 120

Query: 121 ----PKH-----SSNVNKLPSNSN 136
               P H     +S+ +  PS+S+
Sbjct: 121 MAPPPHHHLAIATSSSSASPSSSS 144

BLAST of MS007162 vs. ExPASy TrEMBL
Match: A0A6J1DIT5 (transcription factor MYB36-like OS=Momordica charantia OX=3673 GN=LOC111020865 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 5.0e-99
Identity = 175/178 (98.31%), Postives = 177/178 (99.44%), Query Frame = 0

Query: 1   MGRAACCDKDKVKKGAWSAEEDEKLKAYIQRYGTGGNWIALPNKIGLKRCGKSCRLRWLN 60
           MGRAACCDKDKVKKGAWSAEEDEKLKAYIQ YGTGGNWIALPNKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAACCDKDKVKKGAWSAEEDEKLKAYIQHYGTGGNWIALPNKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSQEEDNIICNLFISIGTRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGT 120
           YL+PNIKHGGFSQEEDNIICNLFISIGTRWSIIAAQLPGRTDND+KNYWNTKLKKKLLGT
Sbjct: 61  YLKPNIKHGGFSQEEDNIICNLFISIGTRWSIIAAQLPGRTDNDVKNYWNTKLKKKLLGT 120

Query: 121 PKHSSNVNKLPSNSNSTMERLQLQMQLQGLHNSYSVYNAAALWPTVSTGEEAKVVTGQ 179
           PKHSSNVNKLPSNSNSTMERLQLQMQLQGLHNSYSVYNAAALWPTVSTGEEAKVVTGQ
Sbjct: 121 PKHSSNVNKLPSNSNSTMERLQLQMQLQGLHNSYSVYNAAALWPTVSTGEEAKVVTGQ 178

BLAST of MS007162 vs. ExPASy TrEMBL
Match: A0A6J1HQ22 (transcription factor MYB36-like OS=Cucurbita maxima OX=3661 GN=LOC111465650 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 4.0e-72
Identity = 133/178 (74.72%), Postives = 149/178 (83.71%), Query Frame = 0

Query: 1   MGRAACCDKDKVKKGAWSAEEDEKLKAYIQRYGTGGNWIALPNKIGLKRCGKSCRLRWLN 60
           MGRA CCDKD VKKG WS EEDEKLKAYIQ +GTGGNWIALPNKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSQEEDNIICNLFISIGTRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGT 120
           YLRPNIKHGGFS+EED+IIC LFISIG+RWSIIAAQLPGRTDNDIKNYWNT+LKKKLLGT
Sbjct: 61  YLRPNIKHGGFSEEEDDIICKLFISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGT 120

Query: 121 PKHSSNVNKLPSNSNSTMERLQLQMQLQGLHNSYSVYNAAALWPTVSTGEEAKVVTGQ 179
           PKH S+     + ++S MERLQLQ QLQG   ++S  + + LWP VS   +  +V G+
Sbjct: 121 PKHVSSRKTAQTVTSSAMERLQLQKQLQGFQTAFSFDSTSTLWPPVSA--DGSLVNGE 176

BLAST of MS007162 vs. ExPASy TrEMBL
Match: A0A6J1FIE9 (transcription factor MYB36-like OS=Cucurbita moschata OX=3662 GN=LOC111444224 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.2e-71
Identity = 130/167 (77.84%), Postives = 144/167 (86.23%), Query Frame = 0

Query: 1   MGRAACCDKDKVKKGAWSAEEDEKLKAYIQRYGTGGNWIALPNKIGLKRCGKSCRLRWLN 60
           MGRA CCDKD VKKG WS EEDEKLKAYIQ +GTGGNWIALPNKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSQEEDNIICNLFISIGTRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGT 120
           YLRPNIKHGGFS+EED+IIC LF+SIG+RWSIIAAQLPGRTDNDIKNYWNT+LKKKLLGT
Sbjct: 61  YLRPNIKHGGFSEEEDDIICKLFVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGT 120

Query: 121 PKHSSNVNKLPSNSNSTMERLQLQMQLQGLHNSYSVYNAAALWPTVS 168
           PKH S+     + ++S MERLQLQ QLQG   ++S  + + LWP VS
Sbjct: 121 PKHVSSRKTAQTVTSSAMERLQLQKQLQGFQTAFSFDSTSMLWPPVS 167

BLAST of MS007162 vs. ExPASy TrEMBL
Match: A0A6A3BG41 (Transcription factor RAX3 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110202pilonHSYRG00120 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 7.5e-71
Identity = 129/163 (79.14%), Postives = 142/163 (87.12%), Query Frame = 0

Query: 2   GRAACCDKDKVKKGAWSAEEDEKLKAYIQRYGTGGNWIALPNKIGLKRCGKSCRLRWLNY 61
           G ++CCDK  VKKG WS EED KLKAYI++YGTGGNWIALP KIGLKRCGKSCRLRWLNY
Sbjct: 15  GSSSCCDKANVKKGPWSPEEDAKLKAYIEQYGTGGNWIALPQKIGLKRCGKSCRLRWLNY 74

Query: 62  LRPNIKHGGFSQEEDNIICNLFISIGTRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGTP 121
           LRPNIKHGGFS+EEDNIIC+L+ISIG+RWSIIAAQLPGRTDNDIKNYWNTKLKKKLLG  
Sbjct: 75  LRPNIKHGGFSEEEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGRR 134

Query: 122 KHSSNVNKLPSNSNSTMERLQLQMQLQGLHNSYSVYNAAALWP 165
           K S+N+     +SNS +ERLQL MQLQGLHN +S YN  ALWP
Sbjct: 135 KQSNNI-----HSNSALERLQLHMQLQGLHNPFSFYNNPALWP 172

BLAST of MS007162 vs. ExPASy TrEMBL
Match: A0A5D2Q8W6 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A05G007500v1 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.3e-70
Identity = 134/194 (69.07%), Postives = 148/194 (76.29%), Query Frame = 0

Query: 1   MGRAACCDKDKVKKGAWSAEEDEKLKAYIQRYGTGGNWIALPNKIGLKRCGKSCRLRWLN 60
           MGRA CCDK  VKKG WS EED KLKAYI++YGTGGNWIALP KIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSQEEDNIICNLFISIGTRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGT 120
           YLRPNIKHGGFS+EEDNIIC+L+ISIG+RWSIIAAQLPGRTDNDIKNYWNTKLKKKLLG 
Sbjct: 61  YLRPNIKHGGFSEEEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGR 120

Query: 121 PKHSSNVNKLPSN--------------------SNSTMERLQLQMQLQGLHNSYSVYNAA 175
            K SSN+++L +                     SNS MERLQL MQLQ L N +S YN  
Sbjct: 121 RKQSSNIHRLSNQDPNDPHQPTGSDDNQLSQGLSNSAMERLQLHMQLQSLQNPFSFYNNP 180

BLAST of MS007162 vs. TAIR 10
Match: AT5G57620.1 (myb domain protein 36 )

HSP 1 Score: 253.8 bits (647), Expect = 1.0e-67
Identity = 128/182 (70.33%), Postives = 138/182 (75.82%), Query Frame = 0

Query: 1   MGRAACCDKDKVKKGAWSAEEDEKLKAYIQRYGTGGNWIALPNKIGLKRCGKSCRLRWLN 60
           MGRA CCDK  VKKG WS EED KLK YI +YGTGGNWIALP KIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSQEEDNIICNLFISIGTRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGT 120
           YLRPNIKHGGFS+EED II +L+ISIG+RWSIIAAQLPGRTDNDIKNYWNTKLKKKLLG 
Sbjct: 61  YLRPNIKHGGFSEEEDRIILSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGR 120

Query: 121 PKH----------------SSNVNKLPSN-SNSTMERLQLQMQLQGLHNSY-SVYNAAAL 165
            K                 ++N NK P N SNS +ERLQL MQLQ L + + S YN   L
Sbjct: 121 QKQMNRQDSITDSTENNLSNNNNNKSPQNLSNSALERLQLHMQLQNLQSPFSSFYNNPIL 180

BLAST of MS007162 vs. TAIR 10
Match: AT5G65790.1 (myb domain protein 68 )

HSP 1 Score: 226.1 bits (575), Expect = 2.2e-59
Identity = 108/152 (71.05%), Postives = 118/152 (77.63%), Query Frame = 0

Query: 1   MGRAACCDKDKVKKGAWSAEEDEKLKAYIQRYGTGGNWIALPNKIGLKRCGKSCRLRWLN 60
           MGRA CCDK  VKKG WS EED KLK YI+  GTGGNWIALP KIGL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKDYIENSGTGGNWIALPQKIGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSQEEDNIICNLFISIGTRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGT 120
           YLRPNIKHGGFS+EEDNIICNL+++IG+RWSIIAAQLPGRTDNDIKNYWNT+LKKKLL  
Sbjct: 61  YLRPNIKHGGFSEEEDNIICNLYVTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLN- 120

Query: 121 PKHSSNVNKLPSNSNSTMERLQLQMQLQGLHN 153
            K      +        M + Q Q Q QG  N
Sbjct: 121 -KQRKEFQEARMKQEMVMMKRQQQGQGQGQSN 150

BLAST of MS007162 vs. TAIR 10
Match: AT3G49690.1 (myb domain protein 84 )

HSP 1 Score: 224.2 bits (570), Expect = 8.5e-59
Identity = 106/166 (63.86%), Postives = 125/166 (75.30%), Query Frame = 0

Query: 1   MGRAACCDKDKVKKGAWSAEEDEKLKAYIQRYGTGGNWIALPNKIGLKRCGKSCRLRWLN 60
           MGRA CCDK  VKKG WS EED KLK+YI+  GTGGNWIALP KIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSQEEDNIICNLFISIGTRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGT 120
           YLRPNIKHGGFS+EE+NIIC+L+++IG+RWSIIAAQLPGRTDNDIKNYWNT+LKKKL+  
Sbjct: 61  YLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLIN- 120

Query: 121 PKHSSNVNKLPSNSNSTMERLQLQMQLQGLHNSYSVYNAAAL--WP 165
            K    + +        M  ++ Q Q Q +  S+ +     +  WP
Sbjct: 121 -KQRKELQEACMEQQEMMVMMKRQHQQQQIQTSFMMRQDQTMFTWP 164

BLAST of MS007162 vs. TAIR 10
Match: AT4G37780.1 (myb domain protein 87 )

HSP 1 Score: 211.5 bits (537), Expect = 5.7e-55
Identity = 98/158 (62.03%), Postives = 118/158 (74.68%), Query Frame = 0

Query: 1   MGRAACCDKDKVKKGAWSAEEDEKLKAYIQRYGTGGNWIALPNKIGLKRCGKSCRLRWLN 60
           MGRA CCDK  VKKG WS EED  LK+YI+++GTG NWI+LP +IG+KRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKMAVKKGPWSTEEDAVLKSYIEKHGTGNNWISLPQRIGIKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSQEEDNIICNLFISIGTRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGT 120
           YLRPN+KHGGF+ EED IIC+L+I+IG+RWSIIA+QLPGRTDNDIKNYWNT+LKKKLL  
Sbjct: 61  YLRPNLKHGGFTDEEDYIICSLYITIGSRWSIIASQLPGRTDNDIKNYWNTRLKKKLLSK 120

Query: 121 PKHSSNVNKLPSNSNSTMERLQLQMQLQGLHNSYSVYN 159
              + +          T      Q Q+Q  H+  +  N
Sbjct: 121 QGKAFHQQLNVKFERGTTSSSSSQNQIQIFHDENTKSN 158

BLAST of MS007162 vs. TAIR 10
Match: AT5G23000.1 (myb domain protein 37 )

HSP 1 Score: 211.5 bits (537), Expect = 5.7e-55
Identity = 94/126 (74.60%), Postives = 107/126 (84.92%), Query Frame = 0

Query: 1   MGRAACCDKDKVKKGAWSAEEDEKLKAYIQRYGTGGNWIALPNKIGLKRCGKSCRLRWLN 60
           MGRA CCDK KVK+G WS EED KL+ YI++YG GGNWI+ P K GL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSQEEDNIICNLFISIGTRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGT 120
           YLRPNIKHG FS+EED II +LF +IG+RWSIIAA LPGRTDNDIKNYWNTKL+KKLL +
Sbjct: 61  YLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWNTKLRKKLLSS 120

Query: 121 PKHSSN 127
              SS+
Sbjct: 121 SSDSSS 126

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022153349.11.0e-9898.31transcription factor MYB36-like [Momordica charantia][more]
XP_022965905.18.2e-7274.72transcription factor MYB36-like [Cucurbita maxima][more]
XP_022938000.12.4e-7177.84transcription factor MYB36-like [Cucurbita moschata][more]
XP_038890909.12.4e-7172.63transcription factor MYB36-like [Benincasa hispida][more]
XP_023537976.19.1e-7173.60transcription factor MYB36-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q9FKL21.4e-6670.33Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1[more]
Q9M2Y91.2e-5763.86Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1[more]
F4JSU08.0e-5462.03Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1[more]
Q9FG688.0e-5474.60Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1[more]
Q9SJL73.0e-5368.75Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1DIT55.0e-9998.31transcription factor MYB36-like OS=Momordica charantia OX=3673 GN=LOC111020865 P... [more]
A0A6J1HQ224.0e-7274.72transcription factor MYB36-like OS=Cucurbita maxima OX=3661 GN=LOC111465650 PE=4... [more]
A0A6J1FIE91.2e-7177.84transcription factor MYB36-like OS=Cucurbita moschata OX=3662 GN=LOC111444224 PE... [more]
A0A6A3BG417.5e-7179.14Transcription factor RAX3 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110202pil... [more]
A0A5D2Q8W61.3e-7069.07Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A05G007500v1 P... [more]
Match NameE-valueIdentityDescription
AT5G57620.11.0e-6770.33myb domain protein 36 [more]
AT5G65790.12.2e-5971.05myb domain protein 68 [more]
AT3G49690.18.5e-5963.86myb domain protein 84 [more]
AT4G37780.15.7e-5562.03myb domain protein 87 [more]
AT5G23000.15.7e-5574.60myb domain protein 37 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 13..64
e-value: 1.6E-12
score: 57.6
coord: 67..115
e-value: 2.5E-11
score: 53.6
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 63..113
score: 9.163591
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 9..62
score: 11.230598
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 71..113
e-value: 3.87433E-8
score: 45.6442
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 16..62
e-value: 4.25711E-9
score: 48.3406
NoneNo IPR availableGENE3D1.10.10.60coord: 6..68
e-value: 2.1E-19
score: 71.1
NoneNo IPR availableGENE3D1.10.10.60coord: 70..145
e-value: 8.2E-20
score: 72.6
NoneNo IPR availablePANTHERPTHR48000OS09G0431300 PROTEINcoord: 1..142
NoneNo IPR availablePANTHERPTHR48000:SF36OS09G0431300 PROTEINcoord: 1..142
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 14..62
e-value: 4.0E-14
score: 52.5
coord: 69..111
e-value: 4.5E-10
score: 39.6
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 63..117
score: 21.751747
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 9..62
score: 15.748487
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 12..109

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS007162.1MS007162.1mRNA