MS007137 (gene) Bitter gourd (TR) v1

Overview


Name	MS007137
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	40S ribosomal protein S8
Location	scaffold25: 721423 .. 722248 (-)
RNA-Seq Expression	MS007137
Synteny	MS007137

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGTATGAGCTTGGAAGGCAACCTGCCAACACTAAGTTGTCCAGCGACAAGTCAGTCAGGAGGATTAGAGTTCGTGGGGGTAATGTGAAGTGGCGTGCTTTTAGGCTTGATCAAGGAAACTACTCTTGGGGTAGTGAGGCTGTGACTAGAAGGGCCCGTATTCTTGATGTGGTGTACAATGCATCTAACAACGAGCTCGTCCGTACTCAATCTCTGGTGAAGAGTGCCATTGTTCAGGTTGATGCAGCACCATTTAAGCAGTGGTATGTTCAGCATTATGGAGTGGATATTGGACGGAAGAAGAAAACCACAGCATCTGCGAAGAAGGAAGAGGTAGATCAAGATTTATAGATCGACTGATTGATTGGGGTTATACGATCTCAAATCCCATTTTTTAATGCTTTAATATGATACAAAACGTGTTCTAATGCAAACTTTATTTTTTTGTGTTGATAGGAAGGTGATGAGGAGGAGAAGAAGAGTAACCATGTCCAGCGCAAACTAGAGAAACGTCAGCAGGACCGTAAGCTTGATGCACATATTGAAGAACAATTCAGCAGCGGTCGTTTGATGGCTTGTATCTCATCACGACCTGGGCAATGTGGCCGAGCAGATGGGTAAGCATCATAAAGCACTTGGTGATATTCTACTTTATGTTGTGCTCTTTCCAACTTGTTTGAGCACAATCACTGAGTGGGGAAAGGGTGTTTGGGTAACTTTGCTGAGGATTTAGCGAATTTGTGACAGATATATCTTGGAGGGCAAAGAGCTCGAGTTCTATATGAAGAAGCTGCAAAGAAAGAAGGGAAAAGGAGCCGGTGCTGCA

mRNA sequence

AGGTATGAGCTTGGAAGGCAACCTGCCAACACTAAGTTGTCCAGCGACAAGTCAGTCAGGAGGATTAGAGTTCGTGGGGGTAATGTGAAGTGGCGTGCTTTTAGGCTTGATCAAGGAAACTACTCTTGGGGTAGTGAGGCTGTGACTAGAAGGGCCCGTATTCTTGATGTGGTGTACAATGCATCTAACAACGAGCTCGTCCGTACTCAATCTCTGGTGAAGAGTGCCATTGTTCAGGTTGATGCAGCACCATTTAAGCAGTGGTATGTTCAGCATTATGGAGTGGATATTGGACGGAAGAAGAAAACCACAGCATCTGCGAAGAAGGAAGAGGAAGGTGATGAGGAGGAGAAGAAGAGTAACCATGTCCAGCGCAAACTAGAGAAACGTCAGCAGGACCGTAAGCTTGATGCACATATTGAAGAACAATTCAGCAGCGGTCGTTTGATGGCTTGTATCTCATCACGACCTGGGCAATGTGGCCGAGCAGATGGATATATCTTGGAGGGCAAAGAGCTCGAGTTCTATATGAAGAAGCTGCAAAGAAAGAAGGGAAAAGGAGCCGGTGCTGCA

Coding sequence (CDS)

AGGTATGAGCTTGGAAGGCAACCTGCCAACACTAAGTTGTCCAGCGACAAGTCAGTCAGGAGGATTAGAGTTCGTGGGGGTAATGTGAAGTGGCGTGCTTTTAGGCTTGATCAAGGAAACTACTCTTGGGGTAGTGAGGCTGTGACTAGAAGGGCCCGTATTCTTGATGTGGTGTACAATGCATCTAACAACGAGCTCGTCCGTACTCAATCTCTGGTGAAGAGTGCCATTGTTCAGGTTGATGCAGCACCATTTAAGCAGTGGTATGTTCAGCATTATGGAGTGGATATTGGACGGAAGAAGAAAACCACAGCATCTGCGAAGAAGGAAGAGGAAGGTGATGAGGAGGAGAAGAAGAGTAACCATGTCCAGCGCAAACTAGAGAAACGTCAGCAGGACCGTAAGCTTGATGCACATATTGAAGAACAATTCAGCAGCGGTCGTTTGATGGCTTGTATCTCATCACGACCTGGGCAATGTGGCCGAGCAGATGGATATATCTTGGAGGGCAAAGAGCTCGAGTTCTATATGAAGAAGCTGCAAAGAAAGAAGGGAAAAGGAGCCGGTGCTGCA

Protein sequence

RYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRARILDVVYNASNNELVRTQSLVKSAIVQVDAAPFKQWYVQHYGVDIGRKKKTTASAKKEEEGDEEEKKSNHVQRKLEKRQQDRKLDAHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA

Homology

[Close]

BLAST of MS007137 vs. NCBI nr
Match: XP_022153390.1 (40S ribosomal protein S8-like [Momordica charantia])

HSP 1 Score: 368.2 bits (944), Expect = 4.2e-98
Identity = 188/191 (98.43%), Postives = 190/191 (99.48%), Query Frame = 0


Query: 1   RYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRARILDVVYN 60
           +YELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRR RILDVVYN
Sbjct: 26  KYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYN 85

Query: 61  ASNNELVRTQSLVKSAIVQVDAAPFKQWYVQHYGVDIGRKKKTTASAKKEEEGDEEEKKS 120
           ASNNELVRTQSLVKSAIVQVDAAPFKQWYVQHYGVDIGRKKKTTASAKKEEEGDEEEKKS
Sbjct: 86  ASNNELVRTQSLVKSAIVQVDAAPFKQWYVQHYGVDIGRKKKTTASAKKEEEGDEEEKKS 145

Query: 121 NHVQRKLEKRQQDRKLDAHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYMKKL 180
           NHVQRKLEKRQQDR+LDAHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYMKKL
Sbjct: 146 NHVQRKLEKRQQDRQLDAHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYMKKL 205

Query: 181 QRKKGKGAGAA 192
           QRKKGKGAGAA
Sbjct: 206 QRKKGKGAGAA 216

[Close]

BLAST of MS007137 vs. NCBI nr
Match: XP_022145218.1 (40S ribosomal protein S8 [Momordica charantia])

HSP 1 Score: 352.8 bits (904), Expect = 1.8e-93
Identity = 181/194 (93.30%), Postives = 188/194 (96.91%), Query Frame = 0


Query: 1   RYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRARILDVVYN 60
           +YELGRQPANTKLSSDKS+RRIRVRGGNVKWRAFRLD GNYSWGSEAVTR+ RILDVVYN
Sbjct: 26  KYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYN 85

Query: 61  ASNNELVRTQSLVKSAIVQVDAAPFKQWYVQHYGVDIGRKKKTTASAKKEEEGD---EEE 120
           ASNNELVRTQ+LVKSAIVQVDAAPFKQWY+QHYGVDIGRKKKT+ASAKKEEEGD   EE 
Sbjct: 86  ASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTSASAKKEEEGDAPSEEA 145

Query: 121 KKSNHVQRKLEKRQQDRKLDAHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYM 180
           KKSNHVQRKLEKRQQ+RKLDAHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYM
Sbjct: 146 KKSNHVQRKLEKRQQERKLDAHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYM 205

Query: 181 KKLQRKKGKGAGAA 192
           KKLQRKKGKGAGAA
Sbjct: 206 KKLQRKKGKGAGAA 219

[Close]

BLAST of MS007137 vs. NCBI nr
Match: XP_008451649.1 (PREDICTED: 40S ribosomal protein S8-like [Cucumis melo] >TYK01356.1 40S ribosomal protein S8-like [Cucumis melo var. makuwa])

HSP 1 Score: 351.3 bits (900), Expect = 5.3e-93
Identity = 180/194 (92.78%), Postives = 187/194 (96.39%), Query Frame = 0


Query: 1   RYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRARILDVVYN 60
           +YELGRQPANTKLSSDKS+RRIRVRGGNVKWRAFRLD GNYSWGSEAVTR+ RILDVVYN
Sbjct: 26  KYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYN 85

Query: 61  ASNNELVRTQSLVKSAIVQVDAAPFKQWYVQHYGVDIGRKKKTTASAKKEEEGD---EEE 120
           ASNNELVRTQ+LVKSAIVQVDAAPFKQWY+QHYGVDIGRKKKT+ASAKKEEEGD   EE 
Sbjct: 86  ASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTSASAKKEEEGDAGTEEV 145

Query: 121 KKSNHVQRKLEKRQQDRKLDAHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYM 180
           KKSNHVQRK+EKRQQDRKLD HIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYM
Sbjct: 146 KKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYM 205

Query: 181 KKLQRKKGKGAGAA 192
           KKLQRKKGKGAGAA
Sbjct: 206 KKLQRKKGKGAGAA 219

[Close]

BLAST of MS007137 vs. NCBI nr
Match: KAA0055563.1 (40S ribosomal protein S8-like [Cucumis melo var. makuwa])

HSP 1 Score: 351.3 bits (900), Expect = 5.3e-93
Identity = 180/194 (92.78%), Postives = 187/194 (96.39%), Query Frame = 0


Query: 1   RYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRARILDVVYN 60
           +YELGRQPANTKLSSDKS+RRIRVRGGNVKWRAFRLD GNYSWGSEAVTR+ RILDVVYN
Sbjct: 46  KYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYN 105

Query: 61  ASNNELVRTQSLVKSAIVQVDAAPFKQWYVQHYGVDIGRKKKTTASAKKEEEGD---EEE 120
           ASNNELVRTQ+LVKSAIVQVDAAPFKQWY+QHYGVDIGRKKKT+ASAKKEEEGD   EE 
Sbjct: 106 ASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTSASAKKEEEGDAGTEEV 165

Query: 121 KKSNHVQRKLEKRQQDRKLDAHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYM 180
           KKSNHVQRK+EKRQQDRKLD HIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYM
Sbjct: 166 KKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYM 225

Query: 181 KKLQRKKGKGAGAA 192
           KKLQRKKGKGAGAA
Sbjct: 226 KKLQRKKGKGAGAA 239

[Close]

BLAST of MS007137 vs. NCBI nr
Match: KAG7029811.1 (40S ribosomal protein S8, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 350.5 bits (898), Expect = 9.0e-93
Identity = 179/194 (92.27%), Postives = 187/194 (96.39%), Query Frame = 0


Query: 1   RYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRARILDVVYN 60
           +YELGRQPANTK+SSDKS+RRIRVRGGNVKWRAFRLD GNYSWGSEAVTR++RILDVVYN
Sbjct: 47  KYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKSRILDVVYN 106

Query: 61  ASNNELVRTQSLVKSAIVQVDAAPFKQWYVQHYGVDIGRKKKTTASAKKEEEGD---EEE 120
           ASNNELVRTQ+LVKSAIVQVDAAPFKQWY+QHYGVDIGRKKKT ASAKKEEEGD   EE 
Sbjct: 107 ASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTVASAKKEEEGDAPTEEV 166

Query: 121 KKSNHVQRKLEKRQQDRKLDAHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYM 180
           KKSNHVQRK+EKRQQDRKLD HIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYM
Sbjct: 167 KKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYM 226

Query: 181 KKLQRKKGKGAGAA 192
           KKLQRKKGKGAGAA
Sbjct: 227 KKLQRKKGKGAGAA 240

[Close]

BLAST of MS007137 vs. ExPASy Swiss-Prot
Match: P49199 (40S ribosomal protein S8 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS8 PE=2 SV=2)

HSP 1 Score: 316.6 bits (810), Expect = 1.9e-85
Identity = 166/196 (84.69%), Postives = 175/196 (89.29%), Query Frame = 0


Query: 1   RYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRARILDVVYN 60
           +YELGRQPANTKLSS+K+VRR+RVRGGNVKWRA RLD GNYSWGSEAVTR+ RILDVVYN
Sbjct: 26  KYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYN 85

Query: 61  ASNNELVRTQSLVKSAIVQVDAAPFKQWYVQHYGVDIGRKKKTTASAKKEEEGD------ 120
           ASNNELVRTQ+LVKSAIVQVDAAPFKQWY+ HYGVDIGRKKK  A AKK+ EG       
Sbjct: 86  ASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKAPA-AKKDAEGQDAEATT 145

Query: 121 EEEKKSNHVQRKLEKRQQDRKLDAHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELE 180
           EE KKSNHV RKLEKRQQ R LDAHIEEQF SGRL+ACISSRPGQCGRADGYILEGKELE
Sbjct: 146 EEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRLLACISSRPGQCGRADGYILEGKELE 205

Query: 181 FYMKKLQRKKGKGAGA 191
           FYMKKLQRKKGKGA A
Sbjct: 206 FYMKKLQRKKGKGASA 220

[Close]

BLAST of MS007137 vs. ExPASy Swiss-Prot
Match: Q08069 (40S ribosomal protein S8 OS=Zea mays OX=4577 GN=RPS8 PE=2 SV=2)

HSP 1 Score: 310.8 bits (795), Expect = 1.0e-83
Identity = 161/196 (82.14%), Postives = 172/196 (87.76%), Query Frame = 0


Query: 1   RYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRARILDVVYN 60
           +YELGRQPANTKLSS+K+VRR+RVRGGNVKWRA RLD GNYSWGSEAVTR+ RILDVVYN
Sbjct: 26  KYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYN 85

Query: 61  ASNNELVRTQSLVKSAIVQVDAAPFKQWYVQHYGVDIGRKKKTTASAKKEEEGD------ 120
           ASNNELVRTQ+LVKSAIVQVDAAPFKQWY+ HYGVDIGRKKKT A+ K   EG       
Sbjct: 86  ASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKTPAAKKDNAEGQEVEAAA 145

Query: 121 EEEKKSNHVQRKLEKRQQDRKLDAHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELE 180
           EE KKSNHV RKLEKR++ R LD HIEEQF SGRL+ACISSRPGQCGRADGYILEGKELE
Sbjct: 146 EETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGRLLACISSRPGQCGRADGYILEGKELE 205

Query: 181 FYMKKLQRKKGKGAGA 191
           FYMKKLQRKKGK A A
Sbjct: 206 FYMKKLQRKKGKSAVA 221

[Close]

BLAST of MS007137 vs. ExPASy Swiss-Prot
Match: O81361 (40S ribosomal protein S8 OS=Prunus armeniaca OX=36596 GN=RPS8 PE=2 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.0e-83
Identity = 164/196 (83.67%), Postives = 179/196 (91.33%), Query Frame = 0


Query: 1   RYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRARILDVVYN 60
           +YELGRQPANTKLSS+K+VRRIRVRGGNVKWRA RLD GN+SWGSEAVTR+ R+LDVVYN
Sbjct: 26  KYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRLLDVVYN 85

Query: 61  ASNNELVRTQSLVKSAIVQVDAAPFKQWYVQHYGVDIGRKKKTTASAKKE--EEGD---E 120
           ASNNELVRTQ+LVKSAIVQVDAAPFKQWY+QHYGV+IGRKKK TA+AKK+  EEG+   E
Sbjct: 86  ASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEIGRKKK-TAAAKKDTPEEGEATTE 145

Query: 121 EEKKSNHVQRKLEKRQQDRKLDAHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEF 180
           E KKSNHV  KLEKRQQ R LDAHIEEQF  G+L+ACISSRPGQCG+ADG ILEGKELEF
Sbjct: 146 EAKKSNHVAIKLEKRQQGRTLDAHIEEQFGGGKLLACISSRPGQCGKADGDILEGKELEF 205

Query: 181 YMKKLQRKKGKGAGAA 192
           YMKKLQRKKGKGAGAA
Sbjct: 206 YMKKLQRKKGKGAGAA 220

[Close]

BLAST of MS007137 vs. ExPASy Swiss-Prot
Match: Q9FIF3 (40S ribosomal protein S8-2 OS=Arabidopsis thaliana OX=3702 GN=RPS8B PE=2 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 1.3e-81
Identity = 157/191 (82.20%), Postives = 170/191 (89.01%), Query Frame = 0


Query: 1   RYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRARILDVVYN 60
           +YELGRQPANTKLSS+K+VRRIRVRGGNVKWRA RLD GN+SWGSEAVTR+ RILDV YN
Sbjct: 26  KYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRILDVAYN 85

Query: 61  ASNNELVRTQSLVKSAIVQVDAAPFKQWYVQHYGVDIGRKKKTTASAKKEEEGDEEEKKS 120
           ASNNELVRTQ+LVKSAIVQVDAAPFKQ Y+QHYGVDIGRKKK  A         EE KKS
Sbjct: 86  ASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGVDIGRKKKGEAVT------TEEVKKS 145

Query: 121 NHVQRKLEKRQQDRKLDAHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYMKKL 180
           NHVQRKLE RQ+ R LD+H+EEQFSSGRL+ACI+SRPGQCGRADGYILEGKELEFYMKKL
Sbjct: 146 NHVQRKLEMRQEGRALDSHLEEQFSSGRLLACIASRPGQCGRADGYILEGKELEFYMKKL 205

Query: 181 QRKKGKGAGAA 192
           Q+KKGK AGAA
Sbjct: 206 QKKKGKNAGAA 210

[Close]

BLAST of MS007137 vs. ExPASy Swiss-Prot
Match: Q93VG5 (40S ribosomal protein S8-1 OS=Arabidopsis thaliana OX=3702 GN=RPS8A PE=1 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 1.4e-80
Identity = 151/196 (77.04%), Postives = 175/196 (89.29%), Query Frame = 0


Query: 1   RYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRARILDVVYN 60
           +YE+GRQPANTKLSS+K+VRRIRVRGGNVKWRA RLD GNYSWGSEA TR+ R+LDVVYN
Sbjct: 26  KYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEATTRKTRVLDVVYN 85

Query: 61  ASNNELVRTQSLVKSAIVQVDAAPFKQWYVQHYGVDIGRKKKTTASAKKE-EEGD----- 120
           ASNNELVRT++LVKSAIVQVDAAPFKQWY+ HYGV++GRKKK+ +S KK+ EEG+     
Sbjct: 86  ASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGVELGRKKKSASSTKKDGEEGEEAAVA 145

Query: 121 --EEEKKSNHVQRKLEKRQQDRKLDAHIEEQFSSGRLMACISSRPGQCGRADGYILEGKE 180
             EE KKSNH+ RK+  RQ+ R LD+HIE+QF+SGRL+ACISSRPGQCGRADGYILEGKE
Sbjct: 146 APEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASGRLLACISSRPGQCGRADGYILEGKE 205

Query: 181 LEFYMKKLQRKKGKGA 189
           LEFYMKK+Q+KKGKGA
Sbjct: 206 LEFYMKKIQKKKGKGA 221

[Close]

BLAST of MS007137 vs. ExPASy TrEMBL
Match: A0A6J1DGP6 (40S ribosomal protein S8 OS=Momordica charantia OX=3673 GN=LOC111020895 PE=3 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.0e-98
Identity = 188/191 (98.43%), Postives = 190/191 (99.48%), Query Frame = 0


Query: 1   RYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRARILDVVYN 60
           +YELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRR RILDVVYN
Sbjct: 26  KYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYN 85

Query: 61  ASNNELVRTQSLVKSAIVQVDAAPFKQWYVQHYGVDIGRKKKTTASAKKEEEGDEEEKKS 120
           ASNNELVRTQSLVKSAIVQVDAAPFKQWYVQHYGVDIGRKKKTTASAKKEEEGDEEEKKS
Sbjct: 86  ASNNELVRTQSLVKSAIVQVDAAPFKQWYVQHYGVDIGRKKKTTASAKKEEEGDEEEKKS 145

Query: 121 NHVQRKLEKRQQDRKLDAHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYMKKL 180
           NHVQRKLEKRQQDR+LDAHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYMKKL
Sbjct: 146 NHVQRKLEKRQQDRQLDAHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYMKKL 205

Query: 181 QRKKGKGAGAA 192
           QRKKGKGAGAA
Sbjct: 206 QRKKGKGAGAA 216

[Close]

BLAST of MS007137 vs. ExPASy TrEMBL
Match: A0A6J1CVC9 (40S ribosomal protein S8 OS=Momordica charantia OX=3673 GN=LOC111014721 PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 8.8e-94
Identity = 181/194 (93.30%), Postives = 188/194 (96.91%), Query Frame = 0


Query: 1   RYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRARILDVVYN 60
           +YELGRQPANTKLSSDKS+RRIRVRGGNVKWRAFRLD GNYSWGSEAVTR+ RILDVVYN
Sbjct: 26  KYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYN 85

Query: 61  ASNNELVRTQSLVKSAIVQVDAAPFKQWYVQHYGVDIGRKKKTTASAKKEEEGD---EEE 120
           ASNNELVRTQ+LVKSAIVQVDAAPFKQWY+QHYGVDIGRKKKT+ASAKKEEEGD   EE 
Sbjct: 86  ASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTSASAKKEEEGDAPSEEA 145

Query: 121 KKSNHVQRKLEKRQQDRKLDAHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYM 180
           KKSNHVQRKLEKRQQ+RKLDAHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYM
Sbjct: 146 KKSNHVQRKLEKRQQERKLDAHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYM 205

Query: 181 KKLQRKKGKGAGAA 192
           KKLQRKKGKGAGAA
Sbjct: 206 KKLQRKKGKGAGAA 219

[Close]

BLAST of MS007137 vs. ExPASy TrEMBL
Match: A0A5A7UI08 (40S ribosomal protein S8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G00400 PE=3 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 2.6e-93
Identity = 180/194 (92.78%), Postives = 187/194 (96.39%), Query Frame = 0


Query: 1   RYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRARILDVVYN 60
           +YELGRQPANTKLSSDKS+RRIRVRGGNVKWRAFRLD GNYSWGSEAVTR+ RILDVVYN
Sbjct: 46  KYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYN 105

Query: 61  ASNNELVRTQSLVKSAIVQVDAAPFKQWYVQHYGVDIGRKKKTTASAKKEEEGD---EEE 120
           ASNNELVRTQ+LVKSAIVQVDAAPFKQWY+QHYGVDIGRKKKT+ASAKKEEEGD   EE 
Sbjct: 106 ASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTSASAKKEEEGDAGTEEV 165

Query: 121 KKSNHVQRKLEKRQQDRKLDAHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYM 180
           KKSNHVQRK+EKRQQDRKLD HIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYM
Sbjct: 166 KKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYM 225

Query: 181 KKLQRKKGKGAGAA 192
           KKLQRKKGKGAGAA
Sbjct: 226 KKLQRKKGKGAGAA 239

[Close]

BLAST of MS007137 vs. ExPASy TrEMBL
Match: A0A5D3BT12 (40S ribosomal protein S8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00420 PE=3 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 2.6e-93
Identity = 180/194 (92.78%), Postives = 187/194 (96.39%), Query Frame = 0


Query: 1   RYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRARILDVVYN 60
           +YELGRQPANTKLSSDKS+RRIRVRGGNVKWRAFRLD GNYSWGSEAVTR+ RILDVVYN
Sbjct: 26  KYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYN 85

Query: 61  ASNNELVRTQSLVKSAIVQVDAAPFKQWYVQHYGVDIGRKKKTTASAKKEEEGD---EEE 120
           ASNNELVRTQ+LVKSAIVQVDAAPFKQWY+QHYGVDIGRKKKT+ASAKKEEEGD   EE 
Sbjct: 86  ASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTSASAKKEEEGDAGTEEV 145

Query: 121 KKSNHVQRKLEKRQQDRKLDAHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYM 180
           KKSNHVQRK+EKRQQDRKLD HIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYM
Sbjct: 146 KKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYM 205

Query: 181 KKLQRKKGKGAGAA 192
           KKLQRKKGKGAGAA
Sbjct: 206 KKLQRKKGKGAGAA 219

[Close]

BLAST of MS007137 vs. ExPASy TrEMBL
Match: A0A1S3BRZ4 (40S ribosomal protein S8 OS=Cucumis melo OX=3656 GN=LOC103492879 PE=3 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 2.6e-93
Identity = 180/194 (92.78%), Postives = 187/194 (96.39%), Query Frame = 0


Query: 1   RYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRARILDVVYN 60
           +YELGRQPANTKLSSDKS+RRIRVRGGNVKWRAFRLD GNYSWGSEAVTR+ RILDVVYN
Sbjct: 26  KYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYN 85

Query: 61  ASNNELVRTQSLVKSAIVQVDAAPFKQWYVQHYGVDIGRKKKTTASAKKEEEGD---EEE 120
           ASNNELVRTQ+LVKSAIVQVDAAPFKQWY+QHYGVDIGRKKKT+ASAKKEEEGD   EE 
Sbjct: 86  ASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTSASAKKEEEGDAGTEEV 145

Query: 121 KKSNHVQRKLEKRQQDRKLDAHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYM 180
           KKSNHVQRK+EKRQQDRKLD HIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYM
Sbjct: 146 KKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYM 205

Query: 181 KKLQRKKGKGAGAA 192
           KKLQRKKGKGAGAA
Sbjct: 206 KKLQRKKGKGAGAA 219

[Close]

BLAST of MS007137 vs. TAIR 10
Match: AT5G59240.1 (Ribosomal protein S8e family protein )

HSP 1 Score: 303.9 bits (777), Expect = 9.0e-83
Identity = 157/191 (82.20%), Postives = 170/191 (89.01%), Query Frame = 0


Query: 1   RYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRARILDVVYN 60
           +YELGRQPANTKLSS+K+VRRIRVRGGNVKWRA RLD GN+SWGSEAVTR+ RILDV YN
Sbjct: 26  KYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRILDVAYN 85

Query: 61  ASNNELVRTQSLVKSAIVQVDAAPFKQWYVQHYGVDIGRKKKTTASAKKEEEGDEEEKKS 120
           ASNNELVRTQ+LVKSAIVQVDAAPFKQ Y+QHYGVDIGRKKK  A         EE KKS
Sbjct: 86  ASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGVDIGRKKKGEAVT------TEEVKKS 145

Query: 121 NHVQRKLEKRQQDRKLDAHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYMKKL 180
           NHVQRKLE RQ+ R LD+H+EEQFSSGRL+ACI+SRPGQCGRADGYILEGKELEFYMKKL
Sbjct: 146 NHVQRKLEMRQEGRALDSHLEEQFSSGRLLACIASRPGQCGRADGYILEGKELEFYMKKL 205

Query: 181 QRKKGKGAGAA 192
           Q+KKGK AGAA
Sbjct: 206 QKKKGKNAGAA 210

[Close]

BLAST of MS007137 vs. TAIR 10
Match: AT5G20290.1 (Ribosomal protein S8e family protein )

HSP 1 Score: 300.4 bits (768), Expect = 1.0e-81
Identity = 151/196 (77.04%), Postives = 175/196 (89.29%), Query Frame = 0


Query: 1   RYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRARILDVVYN 60
           +YE+GRQPANTKLSS+K+VRRIRVRGGNVKWRA RLD GNYSWGSEA TR+ R+LDVVYN
Sbjct: 26  KYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEATTRKTRVLDVVYN 85

Query: 61  ASNNELVRTQSLVKSAIVQVDAAPFKQWYVQHYGVDIGRKKKTTASAKKE-EEGD----- 120
           ASNNELVRT++LVKSAIVQVDAAPFKQWY+ HYGV++GRKKK+ +S KK+ EEG+     
Sbjct: 86  ASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGVELGRKKKSASSTKKDGEEGEEAAVA 145

Query: 121 --EEEKKSNHVQRKLEKRQQDRKLDAHIEEQFSSGRLMACISSRPGQCGRADGYILEGKE 180
             EE KKSNH+ RK+  RQ+ R LD+HIE+QF+SGRL+ACISSRPGQCGRADGYILEGKE
Sbjct: 146 APEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASGRLLACISSRPGQCGRADGYILEGKE 205

Query: 181 LEFYMKKLQRKKGKGA 189
           LEFYMKK+Q+KKGKGA
Sbjct: 206 LEFYMKKIQKKKGKGA 221

The following BLAST results are available for this feature:

BLAST of MS007137 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153390.1	4.2e-98	98.43	40S ribosomal protein S8-like [Momordica charantia]	[more]
XP_022145218.1	1.8e-93	93.30	40S ribosomal protein S8 [Momordica charantia]	[more]
XP_008451649.1	5.3e-93	92.78	PREDICTED: 40S ribosomal protein S8-like [Cucumis melo] >TYK01356.1 40S ribosoma...	[more]
KAA0055563.1	5.3e-93	92.78	40S ribosomal protein S8-like [Cucumis melo var. makuwa]	[more]
KAG7029811.1	9.0e-93	92.27	40S ribosomal protein S8, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of MS007137 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49199	1.9e-85	84.69	40S ribosomal protein S8 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS8 PE=2 S...	[more]
Q08069	1.0e-83	82.14	40S ribosomal protein S8 OS=Zea mays OX=4577 GN=RPS8 PE=2 SV=2	[more]
O81361	1.0e-83	83.67	40S ribosomal protein S8 OS=Prunus armeniaca OX=36596 GN=RPS8 PE=2 SV=1	[more]
Q9FIF3	1.3e-81	82.20	40S ribosomal protein S8-2 OS=Arabidopsis thaliana OX=3702 GN=RPS8B PE=2 SV=1	[more]
Q93VG5	1.4e-80	77.04	40S ribosomal protein S8-1 OS=Arabidopsis thaliana OX=3702 GN=RPS8A PE=1 SV=1	[more]

BLAST of MS007137 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DGP6	2.0e-98	98.43	40S ribosomal protein S8 OS=Momordica charantia OX=3673 GN=LOC111020895 PE=3 SV=...	[more]
A0A6J1CVC9	8.8e-94	93.30	40S ribosomal protein S8 OS=Momordica charantia OX=3673 GN=LOC111014721 PE=3 SV=...	[more]
A0A5A7UI08	2.6e-93	92.78	40S ribosomal protein S8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5D3BT12	2.6e-93	92.78	40S ribosomal protein S8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3BRZ4	2.6e-93	92.78	40S ribosomal protein S8 OS=Cucumis melo OX=3656 GN=LOC103492879 PE=3 SV=1	[more]

BLAST of MS007137 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59240.1	9.0e-83	82.20	Ribosomal protein S8e family protein	[more]
AT5G20290.1	1.0e-81	77.04	Ribosomal protein S8e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001047	Ribosomal protein S8e	TIGRFAM	TIGR00307	TIGR00307	coord: 1..170 e-value: 2.5E-34 score: 116.1
IPR001047	Ribosomal protein S8e	PANTHER	PTHR10394	40S RIBOSOMAL PROTEIN S8	coord: 1..189
None	No IPR available	GENE3D	3.10.290.70		coord: 4..87 e-value: 5.3E-31 score: 109.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..136
None	No IPR available	PANTHER	PTHR10394:SF18	40S RIBOSOMAL PROTEIN S8	coord: 1..189
None	No IPR available	CDD	cd11380	Ribosomal_S8e_like	coord: 1..168 e-value: 4.56112E-53 score: 164.23
IPR022309	Ribosomal protein S8e/ribosomal biogenesis NSA2	PFAM	PF01201	Ribosomal_S8e	coord: 2..168 e-value: 8.4E-42 score: 142.6
IPR042563	Ribosomal protein S8e subdomain, eukaryotes	GENE3D	1.10.168.20	Ribosomal protein S8e, subdomain	coord: 88..147 e-value: 4.6E-27 score: 96.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS007137.1	MS007137.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome