MS007118 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGGCTGTATCTCCCACCGATCATCTTCCTCCACCGTCGCCGACGAAAAAATCCGAGTTGTTCATCTGAGCGGCCACGTCCAGCACTTCCTCCACCCCATAACCGTCCGCCACGTCACCGGAAAGCCGCCGGAGCACTTCCTCTGCACCGCTGCGCAGCTGGTCTCCGCCGCCTCCGCCCCGGCGCTGAACCCCGACGCCGTCCTCCAGCCCGGCAAGGTCTACTTCATGCTTCCCTTCTCCACTCTCCAACCCGACGTTTCCCCCATGGACTTGGCCTCCATAGCCAGAAGGCTCACCGCCGCCGCCAAATCCGCCGGAAAGACACCGCCGCCGCCGCCATCCAGTGGGCCCCTTTGGAACTCTCCGGCGGCGGGGCAGAGCTCGCAGACGTGGAAGCCATTGTTGGACACCATTAAGGAGAGGCCGTTGAACCAGAGGATCAACAAATCGGATTTGCAAGCT ATGGGTGGCTGTATCTCCCACCGATCATCTTCCTCCACCGTCGCCGACGAAAAAATCCGAGTTGTTCATCTGAGCGGCCACGTCCAGCACTTCCTCCACCCCATAACCGTCCGCCACGTCACCGGAAAGCCGCCGGAGCACTTCCTCTGCACCGCTGCGCAGCTGGTCTCCGCCGCCTCCGCCCCGGCGCTGAACCCCGACGCCGTCCTCCAGCCCGGCAAGGTCTACTTCATGCTTCCCTTCTCCACTCTCCAACCCGACGTTTCCCCCATGGACTTGGCCTCCATAGCCAGAAGGCTCACCGCCGCCGCCAAATCCGCCGGAAAGACACCGCCGCCGCCGCCATCCAGTGGGCCCCTTTGGAACTCTCCGGCGGCGGGGCAGAGCTCGCAGACGTGGAAGCCATTGTTGGACACCATTAAGGAGAGGCCGTTGAACCAGAGGATCAACAAATCGGATTTGCAAGCT ATGGGTGGCTGTATCTCCCACCGATCATCTTCCTCCACCGTCGCCGACGAAAAAATCCGAGTTGTTCATCTGAGCGGCCACGTCCAGCACTTCCTCCACCCCATAACCGTCCGCCACGTCACCGGAAAGCCGCCGGAGCACTTCCTCTGCACCGCTGCGCAGCTGGTCTCCGCCGCCTCCGCCCCGGCGCTGAACCCCGACGCCGTCCTCCAGCCCGGCAAGGTCTACTTCATGCTTCCCTTCTCCACTCTCCAACCCGACGTTTCCCCCATGGACTTGGCCTCCATAGCCAGAAGGCTCACCGCCGCCGCCAAATCCGCCGGAAAGACACCGCCGCCGCCGCCATCCAGTGGGCCCCTTTGGAACTCTCCGGCGGCGGGGCAGAGCTCGCAGACGTGGAAGCCATTGTTGGACACCATTAAGGAGAGGCCGTTGAACCAGAGGATCAACAAATCGGATTTGCAAGCT MGGCISHRSSSSTVADEKIRVVHLSGHVQHFLHPITVRHVTGKPPEHFLCTAAQLVSAASAPALNPDAVLQPGKVYFMLPFSTLQPDVSPMDLASIARRLTAAAKSAGKTPPPPPSSGPLWNSPAAGQSSQTWKPLLDTIKERPLNQRINKSDLQA Homology
BLAST of MS007118 vs. NCBI nr
Match: XP_008460258.1 (PREDICTED: uncharacterized protein LOC103499134 [Cucumis melo] >KAA0031747.1 DUF4228 domain-containing protein [Cucumis melo var. makuwa] >TYK08883.1 DUF4228 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 184.1 bits (466), Expect = 9.2e-43 Identity = 107/164 (65.24%), Postives = 125/164 (76.22%), Query Frame = 0
BLAST of MS007118 vs. NCBI nr
Match: XP_011650123.1 (uncharacterized protein LOC105434722 [Cucumis sativus]) HSP 1 Score: 182.2 bits (461), Expect = 3.5e-42 Identity = 105/165 (63.64%), Postives = 124/165 (75.15%), Query Frame = 0
BLAST of MS007118 vs. NCBI nr
Match: KAG7029841.1 (hypothetical protein SDJN02_08184, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 180.3 bits (456), Expect = 1.3e-41 Identity = 98/158 (62.03%), Postives = 119/158 (75.32%), Query Frame = 0
BLAST of MS007118 vs. NCBI nr
Match: XP_023547215.1 (uncharacterized protein LOC111806092 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 176.4 bits (446), Expect = 1.9e-40 Identity = 97/158 (61.39%), Postives = 119/158 (75.32%), Query Frame = 0
BLAST of MS007118 vs. NCBI nr
Match: XP_022996489.1 (uncharacterized protein LOC111491721 [Cucurbita maxima]) HSP 1 Score: 175.6 bits (444), Expect = 3.3e-40 Identity = 100/162 (61.73%), Postives = 120/162 (74.07%), Query Frame = 0
BLAST of MS007118 vs. ExPASy TrEMBL
Match: A0A5D3CAJ8 (DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1411G00050 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 4.4e-43 Identity = 107/164 (65.24%), Postives = 125/164 (76.22%), Query Frame = 0
BLAST of MS007118 vs. ExPASy TrEMBL
Match: A0A1S3CC70 (uncharacterized protein LOC103499134 OS=Cucumis melo OX=3656 GN=LOC103499134 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 4.4e-43 Identity = 107/164 (65.24%), Postives = 125/164 (76.22%), Query Frame = 0
BLAST of MS007118 vs. ExPASy TrEMBL
Match: A0A0A0LHC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060490 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 1.7e-42 Identity = 105/165 (63.64%), Postives = 124/165 (75.15%), Query Frame = 0
BLAST of MS007118 vs. ExPASy TrEMBL
Match: A0A6J1K8V3 (uncharacterized protein LOC111491721 OS=Cucurbita maxima OX=3661 GN=LOC111491721 PE=4 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 1.6e-40 Identity = 100/162 (61.73%), Postives = 120/162 (74.07%), Query Frame = 0
BLAST of MS007118 vs. ExPASy TrEMBL
Match: W9QLQ9 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_016842 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 9.3e-33 Identity = 81/170 (47.65%), Postives = 117/170 (68.82%), Query Frame = 0
BLAST of MS007118 vs. TAIR 10
Match: AT1G76600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21010.1); Has 220 Blast hits to 220 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 220; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 49.3 bits (116), Expect = 3.3e-06 Identity = 32/120 (26.67%), Postives = 58/120 (48.33%), Query Frame = 0
BLAST of MS007118 vs. TAIR 10
Match: AT3G50800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66580.1); Has 249 Blast hits to 249 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 249; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.8 bits (107), Expect = 3.6e-05 Identity = 31/109 (28.44%), Postives = 56/109 (51.38%), Query Frame = 0
BLAST of MS007118 vs. TAIR 10
Match: AT2G30230.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06980.1); Has 167 Blast hits to 167 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 43.5 bits (101), Expect = 1.8e-04 Identity = 20/66 (30.30%), Postives = 34/66 (51.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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