MS007111 (gene) Bitter gourd (TR) v1

Overview


Name	MS007111
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	RNA-binding KH domain-containing protein PEPPER
Location	scaffold25: 373890 .. 381032 (-)
RNA-Seq Expression	MS007111
Synteny	MS007111

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACCAACAAAATTGTAGAGAATGGCTCCACTGATGCCTCCGCCATCAATTCCAACCCCCAAAGTTCGACGCTCGACTCTGTAGCTGCTGCAGAACCAGACTCTACGGAAGCCGGTGGCGCTGAATCCGACCTGGATCCCTCTAACTCCGACTATTTATCGGCGCCGGCTTCGGATTCTGGAGCTCAGGAAGCCTCCAATCATACTGGCTCCTCCGATAAAAAGTGGCCGGGATGGCCCGGGGACTGCGTTTTCCGGCTTATAGTGCCGGTTGTTAAGGTGGGTAGCATTATTGGGCGCAAGGGCGATCTTATCAAGAAGATGTGCGAGGAAACGAAGGCCAGAATTCGGGTTCTTGATGGTGCTGTTGGCACTCCTGATCGCGTTGTGAGTGTTTTTCTGTCCCAAGCTCTTGTTTTTAGTAGAGGAATGGCTTGTTACTGGNTTTGCTTTGTTTGGTTCAATAGCGCGGGTTTGTCTGGAGAATATCTTCCTAGTTATTGTTATTGCTCCAGCCTTACCATTTTTATTTGTTTCTCGGTGGATAATTAGACTGGATGTGACACTTCCTAGACAAGAAATATCTCCATTTTCGTGCCATGGGGTTTCCAGAAAATAAAAAAAAAAGAACAAGAACATTCTCCCATCGTTGGCTGGTTCCCTCAAGTTAACATGTTATGTGTTAGTCCCAAGAAGTTATTTTCTACTTCTTTCTATAAGCCGCAGAATCTGTGTCGGATATTAGGATAACTAGTATTACAAATTCTTGGCCGCCTAGGGCAGCCTAGTTGGCAGTGACTTGGGGTCTGTTAGTCATACTTGCTTAGAGGCCTTAAGTTTGAACCTTCTGGTGAGCTTAATACCAAAAACTCTTGACGTCTCTCGGAGCTGAGCGTGGTTGCCCCTGGATATAAGGGAGCAAAGCTCCGACTCCTAGTTCTCAAAAAAAAAAAAAAAGGAACTTCTTGAAAAAGAGGAACTTCTGTTAAACCTTGTTCTGGTTGTTTAAAATTGAAGCTTGAATTGAGATAAAAACAACTAATTGCGTTTGCTCTGCTGCATCCGTTTTTGCTGATTTTATTTCCCAAGTTCTTTCTTTGTTTCCAGTAACTTCTATTTTTCTACATTTATGTTGAAATGTTGAGTGGAGTGTTTAGAAGATATTAACAGAATTTGTCGATTGAGTTTTGGTGGTTTGATGATTTTTGTGATATTCTTCTTTTCTTTGTTGTTCATATTTGTGGGACTTATTTTTGGTTTAGACTTTTCTGACTGGTCTTTGTTTGGTTCCTCCTCTCTCTTGTAGTTTGTCTCATACGTTTCCTTGAGGCCGTGTATTTTTGGGTTGTTACCACTGTATGTTCATTTGTCTTGATGAAAGTTTCACCTTTTCTCAATAAAAGAAAGCAAGTTTTGTTGGTGCAAGCCAAGGTTTACATAAAATATCAAGGAGAAAAAATTGGGATGTTTGGCCGCTCGTTCTATAGAATAGTTGTAAGGAAAATTTTAGTGGTTAGTTTCAATGAGTTAAATTCTTAGAGTTTAATGGCTACGAGCAAGACATTAAAGATAGCTGGCCTACACGAAATATGAACACAACTCTCCAAATGTCACGATCCTCATTAGAATTTTTCTAAAAAAGTCTTTATATTACCCCCTTTTGTACATCTATTCTATTTCATTACATTAATGAAATCTGTTTCTTCTCAAAAAAAAAAAAAAAAAAAAATTATAACTTTTCGATTGAATATTGCACCAAGAGGACATTGAAGCAACATGATGAGTTACTTGGGGGTAGTTTGGGTGTATCTTAATTTTTTTTAGAAGCTAGTTTGTAGAGGAAGGGTGGTGATGTGGTGTGAAGCAAGGTTGAGAGTGGGTAGTTTGTGTAAAGCTAGTTATAGTGGCGTACTATTAGCAATATTAGTAATATTTTAAGAGGGTACTATTAGCAATATTTGTAATATTTTAAGAGGGTAAAGGCGGCCTACTTTTTTTCTTGAAGAGGAAAGAATTAGGCCTCAAAGCAAAATGAGGCATAAGTTTCCATTTAAATAGAAATCATAAAATTTCAAATTAAGTATTACTAAACATAATAATAAATAATTATATAAAACTATAAAAACCTATTTCTCTCTCAATTGTTTTCACTATTTTAAATAATTATTAATTAAGCTAAAGTCCTATAGGAGTCGTGAGCAGGAAGAAGTTATTTTCAAGATAGACATTGAAAAGGAAGGCTAATGATCACGTGAATTGGGACTTTATGGATAAAGTTACGGGGAAGAAAGGTTTTTGTTTTAAATGGAGATCTTGGATCTGGAGTTGCATTAGAGCGGTTGGATATTCTATCCTTATTAATGGCAAGCCAAGAGGTAGGTTTCACGCTTTGAGAGGCTTGAGACAAGGGGATCCCCTTCCCCCTGTCTATTCTTATTGGTCAATAGTATGAGTAGAATCATTTTGAGAGGGATGGAGAGGAGTATTCTTTCGGGGTCTCGGGCTGGAAGGGATAACCTGTGTTTGCCCCATCTCTAGTTTGTTGATGACACTATCTTATTTTTCTTGGGTAAGGAGGAGTCTCTTGTTAATCTAGGGTCATTTTTAGTCTATTTTTGGTCAAAATATTAATCTGAATAAGTGGGCCTCCTTAGTGGGTTGTGAGATTGGCTCTTTTCCATCCTCCTATTTGGGTCTCCCTCTTGAGCATCTCTCTAGGAGTTTGTCTTTTTGGGTGGAAAAGGTTATGAGATGTCCCTCTTCTTGGCAATGTTTTAAAAGGCTAAAGGTGGCCTTGCAATTTTCCTCTTGAAGAGGCGAGGTGTAAGCCTTGAGGCGGTATGAGTTGTAAGCCTTAATATTAATTATAAAAAATTATACAAATCATAAACTTGTGTAATCAAGTATCTAAATCATGATATTAGTTATATATAAAATTGTAAAAAATTCACCCCAGAAAATTGCCACTTAAATAGAAGTTAGAAAAGGACATCATTAACATCACTATTATTATCACTAATAGGATTGACTTATTCTATTGTTTTTGAAGTGTAGGTAGTAAAAGTAGTGATAGATTGAATTGTTACCATTCATATATTAGCATTTCATACACAACGAAACCTTTATATTTTTTAAGAATGGAGCAAATTAATAATATTCTTCTAATAAGTACATGAGGCGTAAAGACTTCAAGCATCGGTGCATCTTCGTAGAGGCACAGGTCTCGAGGCTAAAAGTTAGAGCGTTGTCTCGAGGCGAGCCTCGAGGCATAAGCCTCAAAAGCCTTTTAAAATATTGCTTCTTCGAAGAAAAGTTATTTCTCCAAAGGAGGTGGACTAGCTCTTGTTCAATTTATTTTGGGTGGGATCTTAACTTACTTCCTTTCCTGTTTAGGGTGCCTGTTTCAGTTAGTAAGATCTTCAAAAAGTTCATGAGGGATTCCCTATGGGGAGGGGTTGATGTGGGGAATAGTTCTCATTTAGTCAAGTGGGAGGTGGTGGGCAAGTCGTTAGATTTTGGGGGTGTAGACATTGGCAACCCGAGAGAACGAAACCAGGCCTTACTATTAGGTCTTATTTTGTTAGATTGGAGCCCTTTTTGTTTTAGTTTAGCTCCATTTGTTGGGGTTGTCTAATTGTATGCGCTTTGTATTCTTTCATTTTTCTCAATGAAAGCGAGGTTGCTTTTAAATACACACACACACACACATACATTGAAGTTATTTATTTTCAACAAAATCATTATATCACTAATAAATCTTTCTCGTTTTTAGTCTCTTGGGTCTGGGTTTGGGGTAGGTGCGGGTGTCCCGAGTATTGGGGAGCAAAGCTCCGACTCTCGGTTATTAAAAAAGAGAACCGATAAATATTTTTTTGGGTAAGAAACTGATAGTTAATTTTTGATGTTTTGAAATATAAAAAAGAAACTGCAAGGCTGGATTACAAAAAGGTCTTCCAGTTCCAGCTGATAAGAGATCATTAATTAGTAAAAGGAGAATAGAAATATTTACATCAACTAAGAGCTGAAGCCATAACTCTGTTAAAAAAAAAAGAAAATTAAAAAGGGAGAGGGGCATTCTTTTAATATCATTACCAATAACTCTTAATCTACTTATTCTTTAATTTTTGTCACCAACATTTTTTTAGTTCGTGGTAAAACTTGTTACAAGTTAAATTATTAACTCATGGTATATTGGCTTGAGATGCACAAGGAAACGCTTAACTGTTATATTTTTTAAGAACATGACAATTTGATATTATTCTTCTAATCATTTCACGAGGTGTAAAGACTTGAAAGCTCAATGTATTGTACAATGCGTAATCCTCTAACAATCCAAGAAGGCGTAGGACTTGAGGCAAAATGATTTTTTGTAATGATCAGTTTGGCTTAATCTATTGATTGGAGTAGCTTTGTTTTTGCTTTTCTTTCTTGGGTTGTTTTTTTTGTATGTCTTTTTGTATTCTTTTATGGTTCTCAATGAATGGTTGATTTTCCATTAAACAAAACGATTCAAATCAAAATTTGACAGTGGGCTGGTTATTGATTTCCATTAAACATGTGTTTTTGTATGGTCTGTTTTTTACTTCCATTTTGTTTAGTAATCTTGGACTTCCTGATTGGCTTTAAATTTTAGAAGGTGGTGATATGTATCTGGTAAATTTAGAATTTGCACTTTGTGGTTTGGGGAGTGATCAAATGATTGTGATTAGGTTCACTTCCAATTAAGAACTGTAATATATAGAAGAGAGGTATAAGTTATAACTTCTCTTTGATGCTTCAATTGATTTGCAAGGATGCTTTGATGCATTTTTGTATAATTTCTTTTAAATAGGAGATCTTGTTGAAACTTGTTCATTCAGTTTTTGACTTATAAAGTTTACTTCAGGTGCTAATTTCGGGAAAAGAAGAGCCTGAGGCGCCTCTTTCCCCTGCAATGGATGCAGTTATAAGAGTGTTCAAACGTGTGTCTGGATTTTCTGAGAATGAAGATGATACTAAGGCTTCATTTTGTTCAATCCGGTTGCTTGTGGCATCAACTCAAGCTATTAATCTTATTGGAAAGCAGGGTTCATTAATAAAATCTATACAGGAGAGTACAGGAGCTTCTGTGCGAGTGTTATCAGGAGGTATGCTTCATTCTCTGTAGTGCATGCGTTGTGCTCTTTTCCTGATTGGTTTTGGCCCTAGCTGTATTATTTTGTCGAGGTCACAAAATCTACTAGTTAGCTAAATTGTAGAGGTGCGTATTCCCACTGTATATCCTTTCATTTGCTCTTTGGTCTTTTATTAAAAAGAAAGTGTAGAGCCATCAGAAAGGGGAATAAGCACACCATCCAAAACCTCGCTGCAAGGGAGGGATCATTCTAAAGAATAATACTGCCCCGATAGAAGACCACCATAATGTGAGAAGTGCAAATGGATCTGTTAAAAATTGGTTCACCTTACTAATCTTTGGTTTGTGCAAAAGAACTCATTACTAACTATATTGTCCTTTTTTGGTGCATTATGAATCCAGAGATGTGATTTTGTGTGGTGGAATTGCAACTAAGATTCATAAAATTTTTAGGTTTTGGCCTTTTGGCATTAGGAAAATTAGATGGTTGAGACCTCTTGTTTGAGATGAACTCATTACTAACTATATTGTTCTTTTTGGTGCATTGTATGCAAAAATGATAATAATGATATAAATCGTCCCTTCATAATTGGATGGGGGATGCAGTATGGGATCATTCTCAAGTTTGGAGTATTTTCAGGTCATCTGAGAGGAGCATACTCATTCTGATTCACTATCATCTTTCTCTTGCTGCTGGCATCTGATAAAAAGTGACCTAAAAATAAAGTATATGACAATTAGCTATAGAAAATAAGTCTTTATTTTCTACCTCAATTATATTGTTGTAAATCAAACTTACCAAGCATGATGACTATTAACTTCAAGCCTTTCTAGCTTCAGACACCAGGTGCAAGCAACTAATAATGTCTTGAGATAATAATACGTTTCCGGATACAGTGATTCTTCTTCTATGGGTACTCTCTCAATTTTCCCTTTCTCATCTACATTAAATGCTTGCAGATGAGATGCCATTCTATGCTGGTGCAGATGAGAGGATGGTGGAACTGCAGGGAGAATCCTTAAAGGTTCTCAAGGCTTTAGAGGCAGTGGTCGGCCACCTAAGGAAGTTTTTAGTTGATCATAGCGTTCTTCCTCTGTTTGAAAAGAGTGTAAGTTCATGTCTTGTTTGGTCTATGATCAACCTTTTCTTTTGCATATTTTAGGACCTCTTATGAGTTGTTTCTACATTGTCCTTTTTTAGTTCAATACAACTGCCTCACAAGATCGTCAAACAGACACCTGGGCTGACAAGTCCTCGCTTCATACTGCATCTCAAAGTGTAATCTCAACCGAATATCCTCCTGCTACAAAAAGAGAATCTCTATTTCTTGACAGGGAAAGTCATCTTGATTCTCATATTGCATCCTCTGGTATTTCTCTCTATGGACAAGATCGAATACTTCCTGGCATTCGATCATCAGGTGTTGCTCGCTCTGGTGCACCTATTGTCACTCAGGTTGGTATAGTAGCACGGTTTTCCAATTAATGGTAGAAGGGAATGGTTTATGTTGACTTAGTGAGGAGAAAATTATCTCACCTACTGAACTCCACAATCAACAAGACCATCATTGCATGTCCATTAGTACTGTTAGGTGATTTCTTATTTAGGCTCGTCTCCTTGTTGTGGTGTGGCAAGCAAGCTTGTCACCTGTATATGTCTATTGTGTATCGAGAACACCGGGTCCAAAATATATGGCATATTTTGCATACGTGCGTTATTTAGCATAATGCTGAATGGGGGCTTCGCTCAGACAGTAGTTATAGAGTCTGTCTTTGTTTCTCTGATCAAGTCACCTCTTTGCTGTTCCTCTCAGGTTACTCAAACAATGCAGATCCCATTATCTTATGCTGAGGACATCATTGGGGTTGGAGGAACAAATATTGCATTCATCCGTCGCAATAGTGGTGCCATCTTAACCATACAAGAGAGCAGGGGATTACCTGATGAGATCACCGTGGAAATAAAAGGCACTTCCTCACAAGTACAGATGGCTCAACAATTAATTCAGGTAATACTTAACGTTCCC

mRNA sequence

ATGGCCACCAACAAAATTGTAGAGAATGGCTCCACTGATGCCTCCGCCATCAATTCCAACCCCCAAAGTTCGACGCTCGACTCTGTAGCTGCTGCAGAACCAGACTCTACGGAAGCCGGTGGCGCTGAATCCGACCTGGATCCCTCTAACTCCGACTATTTATCGGCGCCGGCTTCGGATTCTGGAGCTCAGGAAGCCTCCAATCATACTGGCTCCTCCGATAAAAAGTGGCCGGGATGGCCCGGGGACTGCGTTTTCCGGCTTATAGTGCCGGTTGTTAAGGTGGGTAGCATTATTGGGCGCAAGGGCGATCTTATCAAGAAGATGTGCGAGGAAACGAAGGCCAGAATTCGGGTTCTTGATGGTGCTGTTGGCACTCCTGATCGCGTTGTGCTAATTTCGGGAAAAGAAGAGCCTGAGGCGCCTCTTTCCCCTGCAATGGATGCAGTTATAAGAGTGTTCAAACGTGTGTCTGGATTTTCTGAGAATGAAGATGATACTAAGGCTTCATTTTGTTCAATCCGGTTGCTTGTGGCATCAACTCAAGCTATTAATCTTATTGGAAAGCAGGGTTCATTAATAAAATCTATACAGGAGAGTACAGGAGCTTCTGTGCGAGTGTTATCAGGAGATGAGATGCCATTCTATGCTGGTGCAGATGAGAGGATGGTGGAACTGCAGGGAGAATCCTTAAAGGTTCTCAAGGCTTTAGAGGCAGTGGTCGGCCACCTAAGGAAGTTTTTAGTTGATCATAGCGTTCTTCCTCTGTTTGAAAAGAGTTTCAATACAACTGCCTCACAAGATCGTCAAACAGACACCTGGGCTGACAAGTCCTCGCTTCATACTGCATCTCAAAGTGTAATCTCAACCGAATATCCTCCTGCTACAAAAAGAGAATCTCTATTTCTTGACAGGGAAAGTCATCTTGATTCTCATATTGCATCCTCTGGTATTTCTCTCTATGGACAAGATCGAATACTTCCTGGCATTCGATCATCAGGTGTTGCTCGCTCTGGTGCACCTATTGTCACTCAGGTTACTCAAACAATGCAGATCCCATTATCTTATGCTGAGGACATCATTGGGGTTGGAGGAACAAATATTGCATTCATCCGTCGCAATAGTGGTGCCATCTTAACCATACAAGAGAGCAGGGGATTACCTGATGAGATCACCGTGGAAATAAAAGGCACTTCCTCACAAGTACAGATGGCTCAACAATTAATTCAGGTAATACTTAACGTTCCC

Coding sequence (CDS)

ATGGCCACCAACAAAATTGTAGAGAATGGCTCCACTGATGCCTCCGCCATCAATTCCAACCCCCAAAGTTCGACGCTCGACTCTGTAGCTGCTGCAGAACCAGACTCTACGGAAGCCGGTGGCGCTGAATCCGACCTGGATCCCTCTAACTCCGACTATTTATCGGCGCCGGCTTCGGATTCTGGAGCTCAGGAAGCCTCCAATCATACTGGCTCCTCCGATAAAAAGTGGCCGGGATGGCCCGGGGACTGCGTTTTCCGGCTTATAGTGCCGGTTGTTAAGGTGGGTAGCATTATTGGGCGCAAGGGCGATCTTATCAAGAAGATGTGCGAGGAAACGAAGGCCAGAATTCGGGTTCTTGATGGTGCTGTTGGCACTCCTGATCGCGTTGTGCTAATTTCGGGAAAAGAAGAGCCTGAGGCGCCTCTTTCCCCTGCAATGGATGCAGTTATAAGAGTGTTCAAACGTGTGTCTGGATTTTCTGAGAATGAAGATGATACTAAGGCTTCATTTTGTTCAATCCGGTTGCTTGTGGCATCAACTCAAGCTATTAATCTTATTGGAAAGCAGGGTTCATTAATAAAATCTATACAGGAGAGTACAGGAGCTTCTGTGCGAGTGTTATCAGGAGATGAGATGCCATTCTATGCTGGTGCAGATGAGAGGATGGTGGAACTGCAGGGAGAATCCTTAAAGGTTCTCAAGGCTTTAGAGGCAGTGGTCGGCCACCTAAGGAAGTTTTTAGTTGATCATAGCGTTCTTCCTCTGTTTGAAAAGAGTTTCAATACAACTGCCTCACAAGATCGTCAAACAGACACCTGGGCTGACAAGTCCTCGCTTCATACTGCATCTCAAAGTGTAATCTCAACCGAATATCCTCCTGCTACAAAAAGAGAATCTCTATTTCTTGACAGGGAAAGTCATCTTGATTCTCATATTGCATCCTCTGGTATTTCTCTCTATGGACAAGATCGAATACTTCCTGGCATTCGATCATCAGGTGTTGCTCGCTCTGGTGCACCTATTGTCACTCAGGTTACTCAAACAATGCAGATCCCATTATCTTATGCTGAGGACATCATTGGGGTTGGAGGAACAAATATTGCATTCATCCGTCGCAATAGTGGTGCCATCTTAACCATACAAGAGAGCAGGGGATTACCTGATGAGATCACCGTGGAAATAAAAGGCACTTCCTCACAAGTACAGATGGCTCAACAATTAATTCAGGTAATACTTAACGTTCCC

Protein sequence

MATNKIVENGSTDASAINSNPQSSTLDSVAAAEPDSTEAGGAESDLDPSNSDYLSAPASDSGAQEASNHTGSSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETKARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDTKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWADKSSLHTASQSVISTEYPPATKRESLFLDRESHLDSHIASSGISLYGQDRILPGIRSSGVARSGAPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQVILNVP

Homology

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BLAST of MS007111 vs. NCBI nr
Match: XP_022149911.1 (RNA-binding KH domain-containing protein PEPPER [Momordica charantia])

HSP 1 Score: 768.5 bits (1983), Expect = 3.0e-218
Identity = 406/416 (97.60%), Postives = 409/416 (98.32%), Query Frame = 0


Query: 1   MATNKIVENGSTDASAINSNPQSSTLDSVAAAEPDSTEAGGAESDLDPSNSDYLSAPASD 60
           MATNKI ENGSTDASAINSNPQSSTLDSVAAAE DSTEAGGAESDLDPSNSDYLS PASD
Sbjct: 1   MATNKIAENGSTDASAINSNPQSSTLDSVAAAELDSTEAGGAESDLDPSNSDYLSVPASD 60

Query: 61  SGAQEASNHTGSSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETKARIRVL 120
           SGAQEASNHTGSSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETKARIRVL
Sbjct: 61  SGAQEASNHTGSSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETKARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDTKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDTKASFCSIRLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDTKASFCSIRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEAV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEAV
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEAV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWADKSSLHTASQSVISTEYPPATKRES 300
           VGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWADKSSLHTASQSVISTEYPPATKRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWADKSSLHTASQSVISTEYPPATKRES 300

Query: 301 LFLDRESHLDSHIASSGISLYGQDRILPGIRSSGVARSGAPIVTQVTQTMQIPLSYAEDI 360
           LF DRESHLDSH+ASSGISLYGQDRILPGIRSSGVARSGAPIVTQVTQTMQIPLSYAEDI
Sbjct: 301 LFHDRESHLDSHMASSGISLYGQDRILPGIRSSGVARSGAPIVTQVTQTMQIPLSYAEDI 360

Query: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQVILNVP 417
           IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQ  ++ P
Sbjct: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSGP 416

[Close]

BLAST of MS007111 vs. NCBI nr
Match: XP_038890982.1 (RNA-binding KH domain-containing protein PEPPER-like [Benincasa hispida])

HSP 1 Score: 718.8 bits (1854), Expect = 2.8e-203
Identity = 376/416 (90.38%), Postives = 390/416 (93.75%), Query Frame = 0


Query: 1   MATNKIVENGSTDASAINSNPQSSTLDSVAAAEPDSTEAGGAESDLDPSNSDYLSAPASD 60
           MAT    ENGSTDA+A+NSNPQSSTL S+AAAEPDSTEAGG ESD+DPSN DYLS PASD
Sbjct: 1   MATTTTTENGSTDANALNSNPQSSTLSSLAAAEPDSTEAGGTESDIDPSNEDYLSVPASD 60

Query: 61  SGAQEASNHTGSSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETKARIRVL 120
           S A E  NHTG+SDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEET+ARIRVL
Sbjct: 61  SAAYEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDTKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEE +APLSPAMDAVIRVFKRVSG SENED+ KASFCSIRLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEELDAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEAV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALE V
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWADKSSLHTASQSVISTEYPPATKRES 300
           VGHLRKFLVDHSVLPLFEKSFNT ASQDRQ DTWADKSSL TASQS+ISTEYPP+TKRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQMDTWADKSSLLTASQSIISTEYPPSTKRES 300

Query: 301 LFLDRESHLDSHIASSGISLYGQDRILPGIRSSGVARSGAPIVTQVTQTMQIPLSYAEDI 360
           LFLDRE+HLDSHI SSGISLYGQDR+LP IRSSGV RSG PIVTQVTQTMQIPLSYAEDI
Sbjct: 301 LFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360

Query: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQVILNVP 417
           IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQ  ++ P
Sbjct: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAP 416

[Close]

BLAST of MS007111 vs. NCBI nr
Match: KAG6586109.1 (RNA-binding KH domain-containing protein PEPPER, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 700.3 bits (1806), Expect = 1.0e-197
Identity = 366/413 (88.62%), Postives = 386/413 (93.46%), Query Frame = 0


Query: 1   MATNKIVENGSTDASAINSNPQSSTLDSVAAAEPDSTEAGGAESDLDPSNSDYLSAPASD 60
           MATN   ENGSTDA A+NS+PQ   L   AA EPDSTEAGGAESD+DPSN DYLSAPASD
Sbjct: 1   MATNTTTENGSTDADALNSSPQ---LAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASD 60

Query: 61  SGAQEASNHTGSSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETKARIRVL 120
           S   E+ NH G+SDKKWPGWPGDCVFRLIVPVVKVGSIIGR+GDLIKK+CEET+ARIRVL
Sbjct: 61  SVPHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDTKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEEPEAPLSPAMDAV+R+FKRVSGFSENED+ KASFCS+RLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEAV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAG DERMVELQGE+LKVLKALEAV
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELQGETLKVLKALEAV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWADKSSLHTASQSVISTEYPPATKRES 300
           VGHLRKFLVDHSVLPLFEKSFNT ASQDRQTD WADKSSL +ASQSVISTEYPP++KRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDAWADKSSLLSASQSVISTEYPPSSKRES 300

Query: 301 LFLDRESHLDSHIASSGISLYGQDRILPGIRSSGVARSGAPIVTQVTQTMQIPLSYAEDI 360
           LFLDRE+HLDSHI+SSGISLYG DR+LP IRSSGV RSG PIVTQVTQTMQIPLSYAEDI
Sbjct: 301 LFLDRETHLDSHISSSGISLYGPDRVLPAIRSSGVGRSGVPIVTQVTQTMQIPLSYAEDI 360

Query: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQVIL 414
           IGVGG NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQV+L
Sbjct: 361 IGVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQVLL 410

[Close]

BLAST of MS007111 vs. NCBI nr
Match: XP_023538336.1 (RNA-binding KH domain-containing protein PEPPER-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 693.7 bits (1789), Expect = 9.5e-196
Identity = 362/416 (87.02%), Postives = 384/416 (92.31%), Query Frame = 0


Query: 1   MATNKIVENGSTDASAINSNPQSSTLDSVAAAEPDSTEAGGAESDLDPSNSDYLSAPASD 60
           MATN   ENGSTDA A+NS+PQ   L   AAAEPDSTEAGGAESD+DPSN DYLSAPASD
Sbjct: 1   MATNATTENGSTDADALNSSPQ---LACEAAAEPDSTEAGGAESDIDPSNQDYLSAPASD 60

Query: 61  SGAQEASNHTGSSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETKARIRVL 120
               E+ NH G+SDKKWPGWPGDCVFR+IVPVVKVGSIIGR+GDLIKK+CEET+ARIRVL
Sbjct: 61  YVPHESPNHAGASDKKWPGWPGDCVFRIIVPVVKVGSIIGRRGDLIKKICEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDTKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEEPEAPLSPAMDAV+R+FKRVSGFSENED+ KASFCS+RLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEAV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAG DERMVELQGE+LKVLKALEAV
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELQGETLKVLKALEAV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWADKSSLHTASQSVISTEYPPATKRES 300
           VGHLRKFLVDHSVLPLFEKSFNT ASQDRQTD WADKSSL +ASQSVIS EYPP++KRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDAWADKSSLLSASQSVISNEYPPSSKRES 300

Query: 301 LFLDRESHLDSHIASSGISLYGQDRILPGIRSSGVARSGAPIVTQVTQTMQIPLSYAEDI 360
           LF DRE+HLDSHI+SSGISLYG DR+LP IRSSGV RSG PIVTQVTQTMQIPLSYAEDI
Sbjct: 301 LFFDRETHLDSHISSSGISLYGPDRVLPAIRSSGVGRSGVPIVTQVTQTMQIPLSYAEDI 360

Query: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQVILNVP 417
           IGVGG NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQ  ++ P
Sbjct: 361 IGVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAISGP 413

[Close]

BLAST of MS007111 vs. NCBI nr
Match: XP_031736379.1 (RNA-binding KH domain-containing protein PEPPER isoform X2 [Cucumis sativus])

HSP 1 Score: 693.0 bits (1787), Expect = 1.6e-195
Identity = 368/416 (88.46%), Postives = 380/416 (91.35%), Query Frame = 0


Query: 1   MATNKIVENGSTDASAINSNPQSSTLDSVAAAEPDSTEAGGAESDLDPSNSDYLSAPASD 60
           MATN   ENGSTDA     NP SSTL S+AAAEPDSTEAG  +SD DPSN DY S P SD
Sbjct: 1   MATNTTTENGSTDAI---PNPLSSTLPSLAAAEPDSTEAGDDDSDSDPSNQDYSSVPPSD 60

Query: 61  SGAQEASNHTGSSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETKARIRVL 120
           S A E SNHTG SDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEET+ARIRVL
Sbjct: 61  SAAHEPSNHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDTKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEE E+PLSPAMDAVIRVFKRVSG SENED+ KASFCSIRLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEAV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALE V
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWADKSSLHTASQSVISTEYPPATKRES 300
           VGHLRKFLVDHSVLPLFEKSFNT ASQDRQT+TWADKSSL TASQS+IS EY P+TKRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYAPSTKRES 300

Query: 301 LFLDRESHLDSHIASSGISLYGQDRILPGIRSSGVARSGAPIVTQVTQTMQIPLSYAEDI 360
           LFLDRE+H DSHI+SSGISLYGQDR+LP IRSSGV RSG PIVTQVTQTMQIPLSYAEDI
Sbjct: 301 LFLDREAHFDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360

Query: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQVILNVP 417
           IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQ  +N P
Sbjct: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAP 413

[Close]

BLAST of MS007111 vs. ExPASy Swiss-Prot
Match: Q9SZH4 (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 GN=PEP PE=1 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 5.0e-123
Identity = 233/363 (64.19%), Postives = 289/363 (79.61%), Query Frame = 0


Query: 54  LSAPASDSGAQEASNHTG-SSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEE 113
           L+ P S + A+     T  S++++WPGWPGDCVFR+IVPV KVG+IIGRKGD IKKMCEE
Sbjct: 43  LNQPDSLAAAETTFPDTNDSAEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEE 102

Query: 114 TKARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDD----TK 173
           T+ARI+VLDG V TPDR+VLISGKEEPEA +SPAMDAV+RVF+RVSG  +N+DD      
Sbjct: 103 TRARIKVLDGPVNTPDRIVLISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAG 162

Query: 174 ASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQG 233
           + F S+RLLVASTQAINLIGKQGSLIKSI E++GASVR+LS +E PFYA  DER+V+LQG
Sbjct: 163 SVFSSVRLLVASTQAINLIGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQG 222

Query: 234 ESLKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWAD-KSSLHTASQSV 293
           E+LK+LKALEA+VGHLR+FLVDH+V+PLFEK +    SQ RQ +  A+ KSSLHT S ++
Sbjct: 223 EALKILKALEAIVGHLRRFLVDHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNL 282

Query: 294 ISTEYPPATKRESLFLDRESHLDSHIASSGISLYGQDRILPGIRSSGVARSGAPIVTQVT 353
           +  ++    +RE LFL+R+S +DS +  SG+S+Y QD +L    S G+AR  +  VTQV+
Sbjct: 283 MEPDFSLLARREPLFLERDSRVDSRVQPSGVSIYSQDPVLSARHSPGLARVSSAFVTQVS 342

Query: 354 QTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQ 411
           QTMQIP SYAEDIIGV G NIA+IRR SGA +TI+ES   PD+ITVEIKGT+SQVQ A+Q
Sbjct: 343 QTMQIPFSYAEDIIGVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQVQTAEQ 402

[Close]

BLAST of MS007111 vs. ExPASy Swiss-Prot
Match: Q9SR13 (Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 9.6e-74
Identity = 168/367 (45.78%), Postives = 224/367 (61.04%), Query Frame = 0


Query: 71  GSSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETKARIRVLDGAVGTPDRV 130
           G  +K+WPGWPG+ VFR++VP  KVGSIIGRKGD+IKK+ EET+ARI++LDG  GT +R 
Sbjct: 174 GGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERA 233

Query: 131 VLISGKEEPEAPLSPAMDAVIRVFKR-VSGF-SENEDDTKASFCSIRLLVASTQAINLIG 190
           V++SGKEEPE+ L P+MD ++RV  R V G   E       S  S RLLV ++QA +LIG
Sbjct: 234 VMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIG 293

Query: 191 KQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEAVVGHLRKFL 250
           KQG  +K+IQE++   VRVL  +++P +A  D+R+VE+ GE   V +ALE +  HLRKFL
Sbjct: 294 KQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFL 353

Query: 251 VDHSVLPLFEKSFNTTASQDRQTD-------TWADKSSLHTAS----------------Q 310
           VD S++P FE   N      RQ D       +W      H  S                 
Sbjct: 354 VDRSIIPFFE---NQMQKPTRQMDHMPPPHQSWGPPQG-HAPSVGGGGYGHNPPPYMQPP 413

Query: 311 SVISTEYPPATKRESLFLDRESHLDSHIASSGISLYGQDRILPGIRSSGVARSGAP--IV 370
               + YPP   R+   ++++ H        GIS YG++  +       V  S AP  + 
Sbjct: 414 PRHDSYYPPPEMRQPP-MEKQPH-------QGISAYGREPPM------NVHVSSAPPMVA 473

Query: 371 TQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQ 411
            QVTQ MQIPLSYA+ +IG  G+NI++ RR SGA +TIQE+RG+P E+TVE+ GT SQVQ
Sbjct: 474 QQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQ 522

[Close]

BLAST of MS007111 vs. ExPASy Swiss-Prot
Match: F4KDN0 (KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 6.1e-20
Identity = 99/394 (25.13%), Postives = 174/394 (44.16%), Query Frame = 0


Query: 83  DCVFRLIVPVVKVGSIIGRKGDLIKKMCEETKARIRVLDGAVGTPDRVVLISGKEEPEAP 142
           D VF+++      G +IG  G +++ +  ET A I V +      +R++ ++  E PE  
Sbjct: 451 DVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPECQ 510

Query: 143 LSPAMDAVIRVFKRVSGFSENE--DDTKASFCSIRLLVASTQAINLIGKQGSLIKSIQES 202
            SPA  A++ +F R+   + N+  D+   S  + RL+V ++Q   ++GK G ++  ++++
Sbjct: 511 SSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKT 570

Query: 203 TGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEAVVGHLRKFLVDHSVLPLFEKS 262
           TGA++++L  ++ P     ++++V++ GE   V +A+  +   LR  +  +S+     KS
Sbjct: 571 TGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNSMKNSLAKS 630

Query: 263 FNTTASQ---DRQTDT-------------WADKSSLHTASQ------SVISTEY------ 322
            +   ++   DRQ+D                + SSLH  S+      S  S  Y      
Sbjct: 631 SSALTTERFYDRQSDNPLSIGSHQSVSNPATNSSSLHRRSEDSFLSGSHSSVNYSRSVGT 690

Query: 323 PPATKRESLFLDR----------------ESHLDS--HIASSGISLYGQ----------- 382
            P  + E  F DR                  H D+  H+  +   L+             
Sbjct: 691 DPYIRPEDPFPDRFNPSAGYSHNFGRRFTMDHSDNSHHLTEAPSRLWASPPPAAPRGLSD 750

Query: 383 -DRILPGIRSSGVARSG--APIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILT 414
               L   R+  V  SG  + IVT  T  +++P +    + G  G N+  +R+ SGA + 
Sbjct: 751 ASGGLSSARAGHVLGSGHKSAIVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQISGARVI 810

[Close]

BLAST of MS007111 vs. ExPASy Swiss-Prot
Match: P57721 (Poly(rC)-binding protein 3 OS=Homo sapiens OX=9606 GN=PCBP3 PE=1 SV=2)

HSP 1 Score: 96.3 bits (238), Expect = 8.8e-19
Identity = 100/338 (29.59%), Postives = 158/338 (46.75%), Query Frame = 0


Query: 87  RLIVPVVKVGSIIGRKGDLIKKMCEETKARIRVLDGAVGTPDRVVLISGKEEPEAPLSPA 146
           RL++   +VGSIIG+KG+ +KKM EE+ ARI + +G    P+R+V I+G   P   +  A
Sbjct: 49  RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITG---PTDAIFKA 108

Query: 147 MDAVIRVFKR-VSGFSENEDDTKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASV 206
              +   F+  +     N   T     ++RL+V ++Q  +LIGK GS IK I+ESTGA V
Sbjct: 109 FAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQV 168

Query: 207 RVLSGDEMPFYAGADERMVELQGESLKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTT- 266
           +V +GD +P    + ER V + G    +++ ++ +   + +     + +P   K  +T  
Sbjct: 169 QV-AGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 228

Query: 267 --------ASQDRQTDTWADK-SSLHTASQSVISTEYPPATKRESLFLDRESHLDSHIAS 326
                     Q +      D+ + LH  +     T +PP  +    F   +  L  H + 
Sbjct: 229 IFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQ--QTPFPPLGQTNPAFPGEK--LPLHSSE 288

Query: 327 SGISLYGQDRILPGIRSSGVARSGAPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNS 386
              +L GQ        SSG+  S      ++T    IP      IIG  GT I  IR+ S
Sbjct: 289 EAQNLMGQ--------SSGLDASPPASTHELT----IPNDLIGCIIGRQGTKINEIRQMS 348

Query: 387 GAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQVIL 414
           GA + I  +     E  + I GT + + +AQ LI   L
Sbjct: 349 GAQIKIANATEGSSERQITITGTPANISLAQYLINARL 361

[Close]

BLAST of MS007111 vs. ExPASy Swiss-Prot
Match: P57722 (Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3)

HSP 1 Score: 96.3 bits (238), Expect = 8.8e-19
Identity = 100/338 (29.59%), Postives = 158/338 (46.75%), Query Frame = 0


Query: 87  RLIVPVVKVGSIIGRKGDLIKKMCEETKARIRVLDGAVGTPDRVVLISGKEEPEAPLSPA 146
           RL++   +VGSIIG+KG+ +KKM EE+ ARI + +G    P+R+V I+G   P   +  A
Sbjct: 49  RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITG---PTDAIFKA 108

Query: 147 MDAVIRVFKR-VSGFSENEDDTKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASV 206
              +   F+  +     N   T     ++RL+V ++Q  +LIGK GS IK I+ESTGA V
Sbjct: 109 FAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQV 168

Query: 207 RVLSGDEMPFYAGADERMVELQGESLKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTT- 266
           +V +GD +P    + ER V + G    +++ ++ +   + +     + +P   K  +T  
Sbjct: 169 QV-AGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 228

Query: 267 --------ASQDRQTDTWADK-SSLHTASQSVISTEYPPATKRESLFLDRESHLDSHIAS 326
                     Q +      D+ + LH  +     T +PP  +    F   +  L  H + 
Sbjct: 229 IFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQ--QTPFPPLGQTNPAFPGEK--LPLHSSE 288

Query: 327 SGISLYGQDRILPGIRSSGVARSGAPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNS 386
              +L GQ        SSG+  S      ++T    IP      IIG  GT I  IR+ S
Sbjct: 289 EAQNLMGQ--------SSGLDASPPASTHELT----IPNDLIGCIIGRQGTKINEIRQMS 348

Query: 387 GAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQVIL 414
           GA + I  +     E  + I GT + + +AQ LI   L
Sbjct: 349 GAQIKIANATEGSSERQITITGTPANISLAQYLINARL 361

[Close]

BLAST of MS007111 vs. ExPASy TrEMBL
Match: A0A6J1D9V1 (RNA-binding KH domain-containing protein PEPPER OS=Momordica charantia OX=3673 GN=LOC111018213 PE=4 SV=1)

HSP 1 Score: 768.5 bits (1983), Expect = 1.5e-218
Identity = 406/416 (97.60%), Postives = 409/416 (98.32%), Query Frame = 0


Query: 1   MATNKIVENGSTDASAINSNPQSSTLDSVAAAEPDSTEAGGAESDLDPSNSDYLSAPASD 60
           MATNKI ENGSTDASAINSNPQSSTLDSVAAAE DSTEAGGAESDLDPSNSDYLS PASD
Sbjct: 1   MATNKIAENGSTDASAINSNPQSSTLDSVAAAELDSTEAGGAESDLDPSNSDYLSVPASD 60

Query: 61  SGAQEASNHTGSSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETKARIRVL 120
           SGAQEASNHTGSSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETKARIRVL
Sbjct: 61  SGAQEASNHTGSSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETKARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDTKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDTKASFCSIRLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDTKASFCSIRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEAV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEAV
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEAV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWADKSSLHTASQSVISTEYPPATKRES 300
           VGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWADKSSLHTASQSVISTEYPPATKRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWADKSSLHTASQSVISTEYPPATKRES 300

Query: 301 LFLDRESHLDSHIASSGISLYGQDRILPGIRSSGVARSGAPIVTQVTQTMQIPLSYAEDI 360
           LF DRESHLDSH+ASSGISLYGQDRILPGIRSSGVARSGAPIVTQVTQTMQIPLSYAEDI
Sbjct: 301 LFHDRESHLDSHMASSGISLYGQDRILPGIRSSGVARSGAPIVTQVTQTMQIPLSYAEDI 360

Query: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQVILNVP 417
           IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQ  ++ P
Sbjct: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSGP 416

[Close]

BLAST of MS007111 vs. ExPASy TrEMBL
Match: A0A0A0LMH4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G061550 PE=4 SV=1)

HSP 1 Score: 693.0 bits (1787), Expect = 7.8e-196
Identity = 368/416 (88.46%), Postives = 380/416 (91.35%), Query Frame = 0


Query: 1   MATNKIVENGSTDASAINSNPQSSTLDSVAAAEPDSTEAGGAESDLDPSNSDYLSAPASD 60
           MATN   ENGSTDA     NP SSTL S+AAAEPDSTEAG  +SD DPSN DY S P SD
Sbjct: 1   MATNTTTENGSTDAI---PNPLSSTLPSLAAAEPDSTEAGDDDSDSDPSNQDYSSVPPSD 60

Query: 61  SGAQEASNHTGSSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETKARIRVL 120
           S A E SNHTG SDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEET+ARIRVL
Sbjct: 61  SAAHEPSNHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDTKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEE E+PLSPAMDAVIRVFKRVSG SENED+ KASFCSIRLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEAV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALE V
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWADKSSLHTASQSVISTEYPPATKRES 300
           VGHLRKFLVDHSVLPLFEKSFNT ASQDRQT+TWADKSSL TASQS+IS EY P+TKRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYAPSTKRES 300

Query: 301 LFLDRESHLDSHIASSGISLYGQDRILPGIRSSGVARSGAPIVTQVTQTMQIPLSYAEDI 360
           LFLDRE+H DSHI+SSGISLYGQDR+LP IRSSGV RSG PIVTQVTQTMQIPLSYAEDI
Sbjct: 301 LFLDREAHFDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360

Query: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQVILNVP 417
           IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQ  +N P
Sbjct: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAP 413

[Close]

BLAST of MS007111 vs. ExPASy TrEMBL
Match: A0A5D3BVI2 (RNA-binding KH domain-containing protein PEPPER OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001920 PE=4 SV=1)

HSP 1 Score: 691.8 bits (1784), Expect = 1.7e-195
Identity = 366/416 (87.98%), Postives = 383/416 (92.07%), Query Frame = 0


Query: 1   MATNKIVENGSTDASAINSNPQSSTLDSVAAAEPDSTEAGGAESDLDPSNSDYLSAPASD 60
           MATN   +NGSTDA A   NPQSSTL S+AAAE DSTE G  +SD+DPSN DY S P SD
Sbjct: 1   MATNTTTDNGSTDAIA---NPQSSTLPSLAAAEADSTEVGDDDSDIDPSNQDYSSLPPSD 60

Query: 61  SGAQEASNHTGSSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETKARIRVL 120
           S A E S+HTG+SDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEET+ARIRVL
Sbjct: 61  SAAHEPSSHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDTKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEE ++PLSPAMDAVIRVFKRVSG SENED+ KASF SIRLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEELDSPLSPAMDAVIRVFKRVSGLSENEDEAKASFSSIRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEAV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALE V
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWADKSSLHTASQSVISTEYPPATKRES 300
           VGHLRKFLVDHSVLPLFEKSFNT ASQDRQT+TWADKSSL TASQS+IS EYPP+TKRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRES 300

Query: 301 LFLDRESHLDSHIASSGISLYGQDRILPGIRSSGVARSGAPIVTQVTQTMQIPLSYAEDI 360
           LFLDRE+HLDSHI+SSGISLYGQDR+LP IRSSGV RSG PIVTQVTQTMQIPLSYAEDI
Sbjct: 301 LFLDRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360

Query: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQVILNVP 417
           IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQ  +N P
Sbjct: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAP 413

[Close]

BLAST of MS007111 vs. ExPASy TrEMBL
Match: A0A6J1K7W7 (RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita maxima OX=3661 GN=LOC111491969 PE=4 SV=1)

HSP 1 Score: 689.5 bits (1778), Expect = 8.7e-195
Identity = 366/417 (87.77%), Postives = 384/417 (92.09%), Query Frame = 0


Query: 1   MATNKIVENGSTDASAINSNPQSSTLDSVAAAEPDSTEAGGAESDLDPSNSDYLSAPASD 60
           MATN   +NGSTDA+A+N NP+SS L SVAAAEPDS EAGGAESDLDPSN DYLSAPASD
Sbjct: 1   MATNTATDNGSTDANALNFNPESSPLASVAAAEPDSMEAGGAESDLDPSNQDYLSAPASD 60

Query: 61  SG-AQEASNHTGSSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETKARIRV 120
           S    E+ NHT +SDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEET+ARIRV
Sbjct: 61  SADHDESPNHTDASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV 120

Query: 121 LDGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDTKASFCSIRLLVA 180
           LDGAVGTPDRVVLISGKE+PEAPLSPAMDAVIRVFKRV  FSENED+ K SFCSIRLLVA
Sbjct: 121 LDGAVGTPDRVVLISGKEDPEAPLSPAMDAVIRVFKRVFLFSENEDEAKTSFCSIRLLVA 180

Query: 181 STQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEA 240
           STQAINLIGKQGSLIKSIQESTGAS+RVLSGDEMPFYAGADERMVELQGESLKVLKALEA
Sbjct: 181 STQAINLIGKQGSLIKSIQESTGASIRVLSGDEMPFYAGADERMVELQGESLKVLKALEA 240

Query: 241 VVGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWADKSSLHTASQSVISTEYPPATKRE 300
           VVGHLRKFLVD SVLPLFEKSFNT  SQDRQ D WADKSSL TASQSVIS EYP +TKRE
Sbjct: 241 VVGHLRKFLVDRSVLPLFEKSFNTPPSQDRQMDAWADKSSLLTASQSVISAEYPSSTKRE 300

Query: 301 SLFLDRESHLDSHIASSGISLYGQDRILPGIRSSGVARSGAPIVTQVTQTMQIPLSYAED 360
           SL+LDRE++LDS+I SSGISLYGQDR+LP IRSSGV RSG PIVTQVTQTMQIPLSYAED
Sbjct: 301 SLYLDREAYLDSYIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAED 360

Query: 361 IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQVILNVP 417
           IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQ  ++ P
Sbjct: 361 IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAP 417

[Close]

BLAST of MS007111 vs. ExPASy TrEMBL
Match: A0A6J1FC72 (RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita moschata OX=3662 GN=LOC111444285 PE=4 SV=1)

HSP 1 Score: 688.7 bits (1776), Expect = 1.5e-194
Identity = 362/416 (87.02%), Postives = 383/416 (92.07%), Query Frame = 0


Query: 1   MATNKIVENGSTDASAINSNPQSSTLDSVAAAEPDSTEAGGAESDLDPSNSDYLSAPASD 60
           MATN   ENGSTDA A+NS+ Q   L   AA EPDSTEA GAES +DPSN DYLSAPASD
Sbjct: 1   MATNTTTENGSTDADALNSSAQ---LAFEAAPEPDSTEASGAESGIDPSNQDYLSAPASD 60

Query: 61  SGAQEASNHTGSSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETKARIRVL 120
           S   E+ NH G+SDKKWPGWPGDCVFRLIVPVVKVGSIIGR+GDLIKK+CEET+ARIRVL
Sbjct: 61  SLPHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDTKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEEPEAP SPAMDAV+RVFKRVSGFSENED+ KASFCS+RLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEEPEAPFSPAMDAVLRVFKRVSGFSENEDEAKASFCSVRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEAV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAG DERMVELQGE+LKVLKALEAV
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELQGETLKVLKALEAV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWADKSSLHTASQSVISTEYPPATKRES 300
           VGHLRKFLVDHSVLPLFEKSFNT ASQDRQTD+WADKSSL +ASQSVISTEYPP++KRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDSWADKSSLLSASQSVISTEYPPSSKRES 300

Query: 301 LFLDRESHLDSHIASSGISLYGQDRILPGIRSSGVARSGAPIVTQVTQTMQIPLSYAEDI 360
           LFLDRE+HLDSHI+SSGISLYG DR+LP IRSSGV RSG PIVTQVTQTMQIPLSYAEDI
Sbjct: 301 LFLDRETHLDSHISSSGISLYGPDRVLPAIRSSGVGRSGVPIVTQVTQTMQIPLSYAEDI 360

Query: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQVILNVP 417
           IGVGG NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQ  ++ P
Sbjct: 361 IGVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAISGP 413

[Close]

BLAST of MS007111 vs. TAIR 10
Match: AT4G26000.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 442.6 bits (1137), Expect = 3.5e-124
Identity = 233/363 (64.19%), Postives = 289/363 (79.61%), Query Frame = 0


Query: 54  LSAPASDSGAQEASNHTG-SSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEE 113
           L+ P S + A+     T  S++++WPGWPGDCVFR+IVPV KVG+IIGRKGD IKKMCEE
Sbjct: 43  LNQPDSLAAAETTFPDTNDSAEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEE 102

Query: 114 TKARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDD----TK 173
           T+ARI+VLDG V TPDR+VLISGKEEPEA +SPAMDAV+RVF+RVSG  +N+DD      
Sbjct: 103 TRARIKVLDGPVNTPDRIVLISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAG 162

Query: 174 ASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQG 233
           + F S+RLLVASTQAINLIGKQGSLIKSI E++GASVR+LS +E PFYA  DER+V+LQG
Sbjct: 163 SVFSSVRLLVASTQAINLIGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQG 222

Query: 234 ESLKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWAD-KSSLHTASQSV 293
           E+LK+LKALEA+VGHLR+FLVDH+V+PLFEK +    SQ RQ +  A+ KSSLHT S ++
Sbjct: 223 EALKILKALEAIVGHLRRFLVDHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNL 282

Query: 294 ISTEYPPATKRESLFLDRESHLDSHIASSGISLYGQDRILPGIRSSGVARSGAPIVTQVT 353
           +  ++    +RE LFL+R+S +DS +  SG+S+Y QD +L    S G+AR  +  VTQV+
Sbjct: 283 MEPDFSLLARREPLFLERDSRVDSRVQPSGVSIYSQDPVLSARHSPGLARVSSAFVTQVS 342

Query: 354 QTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQ 411
           QTMQIP SYAEDIIGV G NIA+IRR SGA +TI+ES   PD+ITVEIKGT+SQVQ A+Q
Sbjct: 343 QTMQIPFSYAEDIIGVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQVQTAEQ 402

[Close]

BLAST of MS007111 vs. TAIR 10
Match: AT3G04610.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 278.9 bits (712), Expect = 6.8e-75
Identity = 168/367 (45.78%), Postives = 224/367 (61.04%), Query Frame = 0


Query: 71  GSSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETKARIRVLDGAVGTPDRV 130
           G  +K+WPGWPG+ VFR++VP  KVGSIIGRKGD+IKK+ EET+ARI++LDG  GT +R 
Sbjct: 174 GGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERA 233

Query: 131 VLISGKEEPEAPLSPAMDAVIRVFKR-VSGF-SENEDDTKASFCSIRLLVASTQAINLIG 190
           V++SGKEEPE+ L P+MD ++RV  R V G   E       S  S RLLV ++QA +LIG
Sbjct: 234 VMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIG 293

Query: 191 KQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEAVVGHLRKFL 250
           KQG  +K+IQE++   VRVL  +++P +A  D+R+VE+ GE   V +ALE +  HLRKFL
Sbjct: 294 KQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFL 353

Query: 251 VDHSVLPLFEKSFNTTASQDRQTD-------TWADKSSLHTAS----------------Q 310
           VD S++P FE   N      RQ D       +W      H  S                 
Sbjct: 354 VDRSIIPFFE---NQMQKPTRQMDHMPPPHQSWGPPQG-HAPSVGGGGYGHNPPPYMQPP 413

Query: 311 SVISTEYPPATKRESLFLDRESHLDSHIASSGISLYGQDRILPGIRSSGVARSGAP--IV 370
               + YPP   R+   ++++ H        GIS YG++  +       V  S AP  + 
Sbjct: 414 PRHDSYYPPPEMRQPP-MEKQPH-------QGISAYGREPPM------NVHVSSAPPMVA 473

Query: 371 TQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQ 411
            QVTQ MQIPLSYA+ +IG  G+NI++ RR SGA +TIQE+RG+P E+TVE+ GT SQVQ
Sbjct: 474 QQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQ 522

[Close]

BLAST of MS007111 vs. TAIR 10
Match: AT5G15270.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 102.4 bits (254), Expect = 8.7e-22
Identity = 56/173 (32.37%), Postives = 96/173 (55.49%), Query Frame = 0


Query: 83  DCVFRLIVPVVKVGSIIGRKGDLIKKMCEETKARIRVLDGAVGTPDRVVLISGKEEP--- 142
           D VFR + PV K+GS+IGR GD++K++  +T+++IR+ +   G  +RV+ I    +    
Sbjct: 49  DTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNA 108

Query: 143 ----EAPLSPAMDAVIRVFKRVSGFSENEDDTKASFCSI--RLLVASTQAINLIGKQGSL 202
               E  LSPA DA+ R+  RV       +D+      +  +LLV S Q   ++G+ G +
Sbjct: 109 FGDGEKVLSPAQDALFRIHDRVVADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQI 168

Query: 203 IKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEAVVGHLRK 247
           +++I+  TGA +R++    MP  A   + ++++ GE L V KAL  +   L +
Sbjct: 169 VQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALLQIASRLHE 221

[Close]

BLAST of MS007111 vs. TAIR 10
Match: AT5G15270.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 102.4 bits (254), Expect = 8.7e-22
Identity = 56/173 (32.37%), Postives = 96/173 (55.49%), Query Frame = 0


Query: 83  DCVFRLIVPVVKVGSIIGRKGDLIKKMCEETKARIRVLDGAVGTPDRVVLISGKEEP--- 142
           D VFR + PV K+GS+IGR GD++K++  +T+++IR+ +   G  +RV+ I    +    
Sbjct: 49  DTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNA 108

Query: 143 ----EAPLSPAMDAVIRVFKRVSGFSENEDDTKASFCSI--RLLVASTQAINLIGKQGSL 202
               E  LSPA DA+ R+  RV       +D+      +  +LLV S Q   ++G+ G +
Sbjct: 109 FGDGEKVLSPAQDALFRIHDRVVADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQI 168

Query: 203 IKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEAVVGHLRK 247
           +++I+  TGA +R++    MP  A   + ++++ GE L V KAL  +   L +
Sbjct: 169 VQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALLQIASRLHE 221

[Close]

BLAST of MS007111 vs. TAIR 10
Match: AT5G64390.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 100.1 bits (248), Expect = 4.3e-21
Identity = 99/394 (25.13%), Postives = 174/394 (44.16%), Query Frame = 0


Query: 83  DCVFRLIVPVVKVGSIIGRKGDLIKKMCEETKARIRVLDGAVGTPDRVVLISGKEEPEAP 142
           D VF+++      G +IG  G +++ +  ET A I V +      +R++ ++  E PE  
Sbjct: 451 DVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPECQ 510

Query: 143 LSPAMDAVIRVFKRVSGFSENE--DDTKASFCSIRLLVASTQAINLIGKQGSLIKSIQES 202
            SPA  A++ +F R+   + N+  D+   S  + RL+V ++Q   ++GK G ++  ++++
Sbjct: 511 SSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKT 570

Query: 203 TGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEAVVGHLRKFLVDHSVLPLFEKS 262
           TGA++++L  ++ P     ++++V++ GE   V +A+  +   LR  +  +S+     KS
Sbjct: 571 TGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNSMKNSLAKS 630

Query: 263 FNTTASQ---DRQTDT-------------WADKSSLHTASQ------SVISTEY------ 322
            +   ++   DRQ+D                + SSLH  S+      S  S  Y      
Sbjct: 631 SSALTTERFYDRQSDNPLSIGSHQSVSNPATNSSSLHRRSEDSFLSGSHSSVNYSRSVGT 690

Query: 323 PPATKRESLFLDR----------------ESHLDS--HIASSGISLYGQ----------- 382
            P  + E  F DR                  H D+  H+  +   L+             
Sbjct: 691 DPYIRPEDPFPDRFNPSAGYSHNFGRRFTMDHSDNSHHLTEAPSRLWASPPPAAPRGLSD 750

Query: 383 -DRILPGIRSSGVARSG--APIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILT 414
               L   R+  V  SG  + IVT  T  +++P +    + G  G N+  +R+ SGA + 
Sbjct: 751 ASGGLSSARAGHVLGSGHKSAIVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQISGARVI 810

The following BLAST results are available for this feature:

BLAST of MS007111 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149911.1	3.0e-218	97.60	RNA-binding KH domain-containing protein PEPPER [Momordica charantia]	[more]
XP_038890982.1	2.8e-203	90.38	RNA-binding KH domain-containing protein PEPPER-like [Benincasa hispida]	[more]
KAG6586109.1	1.0e-197	88.62	RNA-binding KH domain-containing protein PEPPER, partial [Cucurbita argyrosperma...	[more]
XP_023538336.1	9.5e-196	87.02	RNA-binding KH domain-containing protein PEPPER-like [Cucurbita pepo subsp. pepo...	[more]
XP_031736379.1	1.6e-195	88.46	RNA-binding KH domain-containing protein PEPPER isoform X2 [Cucumis sativus]	[more]

BLAST of MS007111 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZH4	5.0e-123	64.19	RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SR13	9.6e-74	45.78	Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV...	[more]
F4KDN0	6.1e-20	25.13	KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 S...	[more]
P57721	8.8e-19	29.59	Poly(rC)-binding protein 3 OS=Homo sapiens OX=9606 GN=PCBP3 PE=1 SV=2	[more]
P57722	8.8e-19	29.59	Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3	[more]

BLAST of MS007111 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D9V1	1.5e-218	97.60	RNA-binding KH domain-containing protein PEPPER OS=Momordica charantia OX=3673 G...	[more]
A0A0A0LMH4	7.8e-196	88.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G061550 PE=4 SV=1	[more]
A0A5D3BVI2	1.7e-195	87.98	RNA-binding KH domain-containing protein PEPPER OS=Cucumis melo var. makuwa OX=1...	[more]
A0A6J1K7W7	8.7e-195	87.77	RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1FC72	1.5e-194	87.02	RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita moschata OX=36...	[more]

BLAST of MS007111 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26000.1	3.5e-124	64.19	RNA-binding KH domain-containing protein	[more]
AT3G04610.1	6.8e-75	45.78	RNA-binding KH domain-containing protein	[more]
AT5G15270.2	8.7e-22	32.37	RNA-binding KH domain-containing protein	[more]
AT5G15270.1	8.7e-22	32.37	RNA-binding KH domain-containing protein	[more]
AT5G64390.1	4.3e-21	25.13	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 82..155 e-value: 1.3E-9 score: 48.0 coord: 170..245 e-value: 8.6E-10 score: 48.5 coord: 344..414 e-value: 3.2E-9 score: 46.7
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 334..415 e-value: 1.2E-13 score: 52.4
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 167..251
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 77..138
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 341..413
None	No IPR available	GENE3D	3.30.310.210		coord: 83..248 e-value: 1.9E-30 score: 107.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..74
None	No IPR available	PANTHER	PTHR10288:SF277	RNA-BINDING KH DOMAIN-CONTAINING PROTEIN PEPPER	coord: 73..413
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 73..413
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 171..240 score: 13.774492
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 345..409 score: 14.361462
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 83..150 score: 13.879309
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 85..154 e-value: 5.68046E-19 score: 78.2871
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 173..241 e-value: 2.9516E-16 score: 70.9683
None	No IPR available	CDD	cd00105	KH-I	coord: 347..410 e-value: 2.80041E-11 score: 56.7995
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 347..410 e-value: 2.9E-11 score: 43.0 coord: 86..138 e-value: 3.1E-11 score: 42.9 coord: 174..240 e-value: 9.8E-11 score: 41.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS007111.1	MS007111.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding