MS007099 (gene) Bitter gourd (TR) v1

Overview


Name	MS007099
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ribosomal RNA processing protein 1 homolog
Location	scaffold25: 156279 .. 157979 (+)
RNA-Seq Expression	MS007099
Synteny	MS007099

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAGTTGGTTGAAGGAGATCAAGATTTTACTTCACTGATTAAGCATTTGGCGTCCTCCAACAAGGCGACCAGAGACAAGACCCTCCGTTTGATTGTAAAGACATGGCTTCCGATTCAAACGAGCCTCTCCGATGGCGATATGAAGAAGCTATGGAAGGGTCTCTTCTACTGCGTTTGGCATGCCGATAAGTTTCCTGTTCAGTCCGAGCTTATTAATCGCCTCTCTGCTCTGCTCCTCCATCTTGACCTCCCGCTTGCTGTTCAATACTTCTCTGTTTTTCTTCTTACCATGCGTCGGGAATGGGCCGGCATTGATGCGCTCAGGTTAGATAAGTTTTACCTTTTGATTCGCAGATTTTTGCACCAGTTTTTTGCTTTGATGAAGAAGCATTCGTGGGATTTGGAACTGTGTCGTCGTTTGATTCAAGTTTTGGAAGAAAGGGTGTTTTTCACTGATGATAAGTTTCATGGAAACGGTGTTAATTACCATATTGCTTCTGTGTTCCTTGAGGAACTTAGGCCGTTTCTTCCTCTTCGGAAGGAGGTTGTTGATGTCCTGTTCAAGCCATTCCTTCTTTCCATGGCCAAACTGCCGGATAAAGTGTTGATGGGAAAAATTAAGTCTAATCTTTTTGACGTATTACTGAAAATGGGGAAGCAGTTACTCGAGCATCGAAAATGTGGAGATGACGTTGATTCTGGTGATGATATTGTTGTTTATGGAACACTTTCATTGACAAATCTATTCTCAAGTACATTTTATGAATTGGGTTCTTCACCTGAGTGCTGTCAAGGGAATAGAAAGGTACTGTTTGCCCTGCATGAAGAGTATCAGAAGTTGGAGAAGGATTTTATTTCATCGGGGATTGAGATTTCAATTCCAGATCTTCATGAGCAAGATGGGGATGAAGTACCCACTTTGGTTCCTGTTTCCAGTGAAGAAGAGGCTCCTTCAGATATTTCCATGGTTGACGTAGATGTCACTGAGGAATCTACTGATAAGGCGCTTAAAAAGCAAAAGAAGAATAAAAAGGCCACTGATGTCAGTGGCAAGAAGAAGAAGGCTAAGAAGGCAAAGAAGGCGAAGAAGACCATTAATGGTATTTCTGATCTTGTTTCTGAAAATACTCCTATGAATAAGGACAACGAGAATATAGTTGCTAACGGTGAGAATTCTAATAATGAACAGATTAGTGATGGAAATATGATAAACTTTGATGAATCTGTGATATCAAACCTTCAGATGCAATTTGAGAGGGTTGCTGCGGAAGCTGATTTTGAAGACAGTGTTGTAGGCCCTGTAGTATCAGCCAATGGCTCGGTTAAGAAGAGAAAGAGAGCTAAGAATGCCGATGGACAACAACAAACACATGGTTTAGTACTTCCCAGCCAAGTTGATGCTGAAGAAAATGCAGCTGCAAAGAGTGGAGAGAAGAGCGTAAAAAAGGTAAGGTTTTCCATGAAAAATAACTTAGTGTGGAAACCCCATAATCCCTTGCCACCTGAAAGTTTGAGACTTCCCCCCACTGTTACTCCAAGGGGAAGTGCACTTAAGAAAGGAATACCTCCAGGTCCTATCTTGGAATTCCCCGTTGCAACTAAAAGGACAAAAAGGAGAGCTGTTGCAATGAGGTCAAAGAAAGGAGTAAGAAGCTTGCCTGTCAAACGTTTGAAGAAGTTGAAATCTAAGACTACT

mRNA sequence

ATGGAGGAGTTGGTTGAAGGAGATCAAGATTTTACTTCACTGATTAAGCATTTGGCGTCCTCCAACAAGGCGACCAGAGACAAGACCCTCCGTTTGATTGTAAAGACATGGCTTCCGATTCAAACGAGCCTCTCCGATGGCGATATGAAGAAGCTATGGAAGGGTCTCTTCTACTGCGTTTGGCATGCCGATAAGTTTCCTGTTCAGTCCGAGCTTATTAATCGCCTCTCTGCTCTGCTCCTCCATCTTGACCTCCCGCTTGCTGTTCAATACTTCTCTGTTTTTCTTCTTACCATGCGTCGGGAATGGGCCGGCATTGATGCGCTCAGGTTAGATAAGTTTTACCTTTTGATTCGCAGATTTTTGCACCAGTTTTTTGCTTTGATGAAGAAGCATTCGTGGGATTTGGAACTGTGTCGTCGTTTGATTCAAGTTTTGGAAGAAAGGGTGTTTTTCACTGATGATAAGTTTCATGGAAACGGTGTTAATTACCATATTGCTTCTGTGTTCCTTGAGGAACTTAGGCCGTTTCTTCCTCTTCGGAAGGAGGTTGTTGATGTCCTGTTCAAGCCATTCCTTCTTTCCATGGCCAAACTGCCGGATAAAGTGTTGATGGGAAAAATTAAGTCTAATCTTTTTGACGTATTACTGAAAATGGGGAAGCAGTTACTCGAGCATCGAAAATGTGGAGATGACGTTGATTCTGGTGATGATATTGTTGTTTATGGAACACTTTCATTGACAAATCTATTCTCAAGTACATTTTATGAATTGGGTTCTTCACCTGAGTGCTGTCAAGGGAATAGAAAGGTACTGTTTGCCCTGCATGAAGAGTATCAGAAGTTGGAGAAGGATTTTATTTCATCGGGGATTGAGATTTCAATTCCAGATCTTCATGAGCAAGATGGGGATGAAGTACCCACTTTGGTTCCTGTTTCCAGTGAAGAAGAGGCTCCTTCAGATATTTCCATGGTTGACGTAGATGTCACTGAGGAATCTACTGATAAGGCGCTTAAAAAGCAAAAGAAGAATAAAAAGGCCACTGATGTCAGTGGCAAGAAGAAGAAGGCTAAGAAGGCAAAGAAGGCGAAGAAGACCATTAATGGTATTTCTGATCTTGTTTCTGAAAATACTCCTATGAATAAGGACAACGAGAATATAGTTGCTAACGGTGAGAATTCTAATAATGAACAGATTAGTGATGGAAATATGATAAACTTTGATGAATCTGTGATATCAAACCTTCAGATGCAATTTGAGAGGGTTGCTGCGGAAGCTGATTTTGAAGACAGTGTTGTAGGCCCTGTAGTATCAGCCAATGGCTCGGTTAAGAAGAGAAAGAGAGCTAAGAATGCCGATGGACAACAACAAACACATGGTTTAGTACTTCCCAGCCAAGTTGATGCTGAAGAAAATGCAGCTGCAAAGAGTGGAGAGAAGAGCGTAAAAAAGGTAAGGTTTTCCATGAAAAATAACTTAGTGTGGAAACCCCATAATCCCTTGCCACCTGAAAGTTTGAGACTTCCCCCCACTGTTACTCCAAGGGGAAGTGCACTTAAGAAAGGAATACCTCCAGGTCCTATCTTGGAATTCCCCGTTGCAACTAAAAGGACAAAAAGGAGAGCTGTTGCAATGAGGTCAAAGAAAGGAGTAAGAAGCTTGCCTGTCAAACGTTTGAAGAAGTTGAAATCTAAGACTACT

Coding sequence (CDS)

ATGGAGGAGTTGGTTGAAGGAGATCAAGATTTTACTTCACTGATTAAGCATTTGGCGTCCTCCAACAAGGCGACCAGAGACAAGACCCTCCGTTTGATTGTAAAGACATGGCTTCCGATTCAAACGAGCCTCTCCGATGGCGATATGAAGAAGCTATGGAAGGGTCTCTTCTACTGCGTTTGGCATGCCGATAAGTTTCCTGTTCAGTCCGAGCTTATTAATCGCCTCTCTGCTCTGCTCCTCCATCTTGACCTCCCGCTTGCTGTTCAATACTTCTCTGTTTTTCTTCTTACCATGCGTCGGGAATGGGCCGGCATTGATGCGCTCAGGTTAGATAAGTTTTACCTTTTGATTCGCAGATTTTTGCACCAGTTTTTTGCTTTGATGAAGAAGCATTCGTGGGATTTGGAACTGTGTCGTCGTTTGATTCAAGTTTTGGAAGAAAGGGTGTTTTTCACTGATGATAAGTTTCATGGAAACGGTGTTAATTACCATATTGCTTCTGTGTTCCTTGAGGAACTTAGGCCGTTTCTTCCTCTTCGGAAGGAGGTTGTTGATGTCCTGTTCAAGCCATTCCTTCTTTCCATGGCCAAACTGCCGGATAAAGTGTTGATGGGAAAAATTAAGTCTAATCTTTTTGACGTATTACTGAAAATGGGGAAGCAGTTACTCGAGCATCGAAAATGTGGAGATGACGTTGATTCTGGTGATGATATTGTTGTTTATGGAACACTTTCATTGACAAATCTATTCTCAAGTACATTTTATGAATTGGGTTCTTCACCTGAGTGCTGTCAAGGGAATAGAAAGGTACTGTTTGCCCTGCATGAAGAGTATCAGAAGTTGGAGAAGGATTTTATTTCATCGGGGATTGAGATTTCAATTCCAGATCTTCATGAGCAAGATGGGGATGAAGTACCCACTTTGGTTCCTGTTTCCAGTGAAGAAGAGGCTCCTTCAGATATTTCCATGGTTGACGTAGATGTCACTGAGGAATCTACTGATAAGGCGCTTAAAAAGCAAAAGAAGAATAAAAAGGCCACTGATGTCAGTGGCAAGAAGAAGAAGGCTAAGAAGGCAAAGAAGGCGAAGAAGACCATTAATGGTATTTCTGATCTTGTTTCTGAAAATACTCCTATGAATAAGGACAACGAGAATATAGTTGCTAACGGTGAGAATTCTAATAATGAACAGATTAGTGATGGAAATATGATAAACTTTGATGAATCTGTGATATCAAACCTTCAGATGCAATTTGAGAGGGTTGCTGCGGAAGCTGATTTTGAAGACAGTGTTGTAGGCCCTGTAGTATCAGCCAATGGCTCGGTTAAGAAGAGAAAGAGAGCTAAGAATGCCGATGGACAACAACAAACACATGGTTTAGTACTTCCCAGCCAAGTTGATGCTGAAGAAAATGCAGCTGCAAAGAGTGGAGAGAAGAGCGTAAAAAAGGTAAGGTTTTCCATGAAAAATAACTTAGTGTGGAAACCCCATAATCCCTTGCCACCTGAAAGTTTGAGACTTCCCCCCACTGTTACTCCAAGGGGAAGTGCACTTAAGAAAGGAATACCTCCAGGTCCTATCTTGGAATTCCCCGTTGCAACTAAAAGGACAAAAAGGAGAGCTGTTGCAATGAGGTCAAAGAAAGGAGTAAGAAGCTTGCCTGTCAAACGTTTGAAGAAGTTGAAATCTAAGACTACT

Protein sequence

MEELVEGDQDFTSLIKHLASSNKATRDKTLRLIVKTWLPIQTSLSDGDMKKLWKGLFYCVWHADKFPVQSELINRLSALLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQFFALMKKHSWDLELCRRLIQVLEERVFFTDDKFHGNGVNYHIASVFLEELRPFLPLRKEVVDVLFKPFLLSMAKLPDKVLMGKIKSNLFDVLLKMGKQLLEHRKCGDDVDSGDDIVVYGTLSLTNLFSSTFYELGSSPECCQGNRKVLFALHEEYQKLEKDFISSGIEISIPDLHEQDGDEVPTLVPVSSEEEAPSDISMVDVDVTEESTDKALKKQKKNKKATDVSGKKKKAKKAKKAKKTINGISDLVSENTPMNKDNENIVANGENSNNEQISDGNMINFDESVISNLQMQFERVAAEADFEDSVVGPVVSANGSVKKRKRAKNADGQQQTHGLVLPSQVDAEENAAAKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPVATKRTKRRAVAMRSKKGVRSLPVKRLKKLKSKTT

Homology

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BLAST of MS007099 vs. NCBI nr
Match: XP_022149903.1 (ribosomal RNA processing protein 1 homolog [Momordica charantia])

HSP 1 Score: 1084.3 bits (2803), Expect = 0.0e+00
Identity = 566/567 (99.82%), Postives = 567/567 (100.00%), Query Frame = 0


Query: 1   MEELVEGDQDFTSLIKHLASSNKATRDKTLRLIVKTWLPIQTSLSDGDMKKLWKGLFYCV 60
           MEELVEGDQDFTSLIKHLASSNKATRDKTLRLIVKTWLPIQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEELVEGDQDFTSLIKHLASSNKATRDKTLRLIVKTWLPIQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKFPVQSELINRLSALLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADKFPVQSELINRLSALLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKFPVQSELINRLSALLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALMKKHSWDLELCRRLIQVLEERVFFTDDKFHGNGVNYHIASVFLEELRPFLPL 180
           FLHQFFALMKKHSWDLELCRRLIQVLEERVFFTDDKFHGNGVNYHIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALMKKHSWDLELCRRLIQVLEERVFFTDDKFHGNGVNYHIASVFLEELRPFLPL 180

Query: 181 RKEVVDVLFKPFLLSMAKLPDKVLMGKIKSNLFDVLLKMGKQLLEHRKCGDDVDSGDDIV 240
           RKEVVDVLFKPFLLSMAKLPDKVLMGKIKSNLFDVLLKMGKQLLEHRKCGDDVDSGDDIV
Sbjct: 181 RKEVVDVLFKPFLLSMAKLPDKVLMGKIKSNLFDVLLKMGKQLLEHRKCGDDVDSGDDIV 240

Query: 241 VYGTLSLTNLFSSTFYELGSSPECCQGNRKVLFALHEEYQKLEKDFISSGIEISIPDLHE 300
           VYGTLSLTNLFSSTFYELGSSPECCQGNRKVLFALHEEYQKLEKDFISSGIEISIPDLHE
Sbjct: 241 VYGTLSLTNLFSSTFYELGSSPECCQGNRKVLFALHEEYQKLEKDFISSGIEISIPDLHE 300

Query: 301 QDGDEVPTLVPVSSEEEAPSDISMVDVDVTEESTDKALKKQKKNKKATDVSGKKKKAKKA 360
           QDGDEVPTLVPVSSEEEAPSDISMVDVDVTEESTDKALKKQKKNKKATDVSGKKKKAKKA
Sbjct: 301 QDGDEVPTLVPVSSEEEAPSDISMVDVDVTEESTDKALKKQKKNKKATDVSGKKKKAKKA 360

Query: 361 KKAKKTINGISDLVSENTPMNKDNENIVANGENSNNEQISDGNMINFDESVISNLQMQFE 420
           KKAKKT+NGISDLVSENTPMNKDNENIVANGENSNNEQISDGNMINFDESVISNLQMQFE
Sbjct: 361 KKAKKTMNGISDLVSENTPMNKDNENIVANGENSNNEQISDGNMINFDESVISNLQMQFE 420

Query: 421 RVAAEADFEDSVVGPVVSANGSVKKRKRAKNADGQQQTHGLVLPSQVDAEENAAAKSGEK 480
           RVAAEADFEDSVVGPVVSANGSVKKRKRAKNADGQQQTHGLVLPSQVDAEENAAAKSGEK
Sbjct: 421 RVAAEADFEDSVVGPVVSANGSVKKRKRAKNADGQQQTHGLVLPSQVDAEENAAAKSGEK 480

Query: 481 SVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPVATKRTKR 540
           SVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPVATKRTKR
Sbjct: 481 SVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPVATKRTKR 540

Query: 541 RAVAMRSKKGVRSLPVKRLKKLKSKTT 568
           RAVAMRSKKGVRSLPVKRLKKLKSKTT
Sbjct: 541 RAVAMRSKKGVRSLPVKRLKKLKSKTT 567

[Close]

BLAST of MS007099 vs. NCBI nr
Match: XP_038875379.1 (ribosomal RNA processing protein 1 homolog [Benincasa hispida])

HSP 1 Score: 954.1 bits (2465), Expect = 5.3e-274
Identity = 497/568 (87.50%), Postives = 533/568 (93.84%), Query Frame = 0


Query: 1   MEELVEGDQDFTSLIKHLASSNKATRDKTLRLIVKTWLPIQTSLSDGDMKKLWKGLFYCV 60
           MEE+VEGDQ+FTSL+K LASSNKATRDKTLR+I+KTWLP Q SLSDGDMKKLWKGLFYC+
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQKSLSDGDMKKLWKGLFYCI 60

Query: 61  WHADKFPVQSELINRLSALLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK PVQSELINRL++LLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALMKKHSWDLELCRRLIQVLEERVFFTDDKFHGNGVNYHIASVFLEELRPFLPL 180
           FLHQFFAL+KKHSWDLELCR  +QVLEERVFF DDKFHGNGVNY IASVFLEEL+PFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRCSVQVLEERVFFADDKFHGNGVNYQIASVFLEELKPFLPL 180

Query: 181 RKEVVDVLFKPFLLSMAKLPDKVLMGKIKSNLFDVLLKMGKQLLEHRKCGDDVDSGDDIV 240
           +KEV+DVLFKPFL SM KLPDKVL+GKIKSNLFDV+LKMGKQLL+ RKCGDDVDSGDDIV
Sbjct: 181 QKEVIDVLFKPFLCSMVKLPDKVLLGKIKSNLFDVILKMGKQLLDRRKCGDDVDSGDDIV 240

Query: 241 VYGTLSLTNLFSSTFYELGSSPECCQGNRKVLFALHEEYQKLEKDFISSGIEISIPDLHE 300
           V+GT+S TNLFS+TFYELGSSP+CCQGNRKVLFA+HEE+QKLEKDFISSG+EIS+P L E
Sbjct: 241 VFGTISFTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFISSGVEISLPGLQE 300

Query: 301 QDGDEVPTLVPVSSEEEAPSDISMVDVDVTEESTDKALKKQKKNKKATDVSGKKKKAKKA 360
           QDGDEVPTLVPVSSEEEAPS+ISMVDVDV  +STDKALKKQKK+KKATD SG KKKAKKA
Sbjct: 301 QDGDEVPTLVPVSSEEEAPSEISMVDVDVNADSTDKALKKQKKSKKATDDSG-KKKAKKA 360

Query: 361 KKAKKTINGISDLVSENTPMNKDNENI-VANGENSNNEQISDGNMINFDESVISNLQMQF 420
           KKAK+T NGISDLVSENTP+NKDNENI VANGENSNNEQISDGNMI FDE+VISNLQMQF
Sbjct: 361 KKAKETTNGISDLVSENTPVNKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQF 420

Query: 421 ERVAAEADFEDSVVGPVVSANGSVKKRKRAKNADGQQQTHGLVLPSQVDAEENAAAKSGE 480
           ER AAEADFEDS   PV+SANGSVKKRKRAKN DG Q+ H +VL SQVDAE N AAKS E
Sbjct: 421 ERAAAEADFEDSFASPVMSANGSVKKRKRAKNVDGSQK-HEVVLSSQVDAEGNTAAKSEE 480

Query: 481 KSVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPVATKRTK 540
           KSVKKVRFSMKNNLVWKPHNPLPPESLRLPP+VTPRGSALKKGIPPGPILEFP  TKRTK
Sbjct: 481 KSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTK 540

Query: 541 RRAVAMRSKKGVRSLPVKRLKKLKSKTT 568
           RRAVAMR+KKGVRSLPVKRLKKLKSK+T
Sbjct: 541 RRAVAMRAKKGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of MS007099 vs. NCBI nr
Match: XP_008450828.1 (PREDICTED: ribosomal RNA processing protein 1 homolog [Cucumis melo] >KAA0047556.1 ribosomal RNA processing protein 1-like protein [Cucumis melo var. makuwa] >TYK14953.1 ribosomal RNA processing protein 1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 944.9 bits (2441), Expect = 3.2e-271
Identity = 495/568 (87.15%), Postives = 528/568 (92.96%), Query Frame = 0


Query: 1   MEELVEGDQDFTSLIKHLASSNKATRDKTLRLIVKTWLPIQTSLSDGDMKKLWKGLFYCV 60
           MEE+VEGDQ+FTSL+K LASSNKATRDKTLR+I+KTWLP QTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKFPVQSELINRLSALLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK PVQSELINRL++LLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALMKKHSWDLELCRRLIQVLEERVFFTDDKFHGNGVNYHIASVFLEELRPFLPL 180
           FLHQFFAL+KKHSWDLELCR L+QVLEERVFFTDDKFHGNGVNY IASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL 180

Query: 181 RKEVVDVLFKPFLLSMAKLPDKVLMGKIKSNLFDVLLKMGKQLLEHRKCGDDVDSGDDIV 240
           +KEVVDVLFKPFLLSMAKLPDKVL GKIKSNLFDV+LKMGKQLLE RK GDD+DSGDD  
Sbjct: 181 QKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTA 240

Query: 241 VYGTLSLTNLFSSTFYELGSSPECCQGNRKVLFALHEEYQKLEKDFISSGIEISIPDLHE 300
           VYGT+SLTN FS+TFYELGSSP+CCQGNRKVLFA+HEE+QKLEKDF SSGIEIS PDL E
Sbjct: 241 VYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300

Query: 301 QDGDEVPTLVPVSSEEEAPSDISMVDVDVTEESTDKALKKQKKNKKATDVSGKKKKAKKA 360
           QDGDEVPTLVP+ SEEEAPS+ISMVDVDV  ESTDKALKKQK++KKATD SG KKKAKKA
Sbjct: 301 QDGDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSG-KKKAKKA 360

Query: 361 KKAKKTINGISDLVSENTPMNKDNENI-VANGENSNNEQISDGNMINFDESVISNLQMQF 420
           KKAKKT NGISDLVSEN+P NKDNENI VANGENSNNEQISDGNMI FDE+VISNLQMQF
Sbjct: 361 KKAKKTTNGISDLVSENSPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQF 420

Query: 421 ERVAAEADFEDSVVGPVVSANGSVKKRKRAKNADGQQQTHGLVLPSQVDAEENAAAKSGE 480
           E+VAAEADF DS+V PV+S NGSVKKRKRAKN D + Q H + LPS+  AE N AAKS E
Sbjct: 421 EKVAAEADFGDSIVSPVISTNGSVKKRKRAKNVD-ELQKHDVALPSEAQAEGNTAAKSEE 480

Query: 481 KSVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPVATKRTK 540
           KSVKKVRFSMKNNLVWKPHNPLPPESLRLPP+VTPRGSALKKGIPPGPILEFP  TKRTK
Sbjct: 481 KSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTK 540

Query: 541 RRAVAMRSKKGVRSLPVKRLKKLKSKTT 568
           RRAV+MR+KKGVRSLPVKRLKKLKSK+T
Sbjct: 541 RRAVSMRTKKGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of MS007099 vs. NCBI nr
Match: XP_004150388.1 (ribosomal RNA processing protein 1 homolog [Cucumis sativus])

HSP 1 Score: 931.0 bits (2405), Expect = 4.8e-267
Identity = 492/568 (86.62%), Postives = 523/568 (92.08%), Query Frame = 0


Query: 1   MEELVEGDQDFTSLIKHLASSNKATRDKTLRLIVKTWLPIQTSLSDGDMKKLWKGLFYCV 60
           MEE+VEGDQ+FTSL+K LASSNKATRDKTLR+I+KTWLP QTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKFPVQSELINRLSALLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK PVQSELINRL++LLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALMKKHSWDLELCRRLIQVLEERVFFTDDKFHGNGVNYHIASVFLEELRPFLPL 180
           FLHQFFAL+KKHSWDLELCRRL+QVLEERV+F +DKFHGNGVNY IASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPL 180

Query: 181 RKEVVDVLFKPFLLSMAKLPDKVLMGKIKSNLFDVLLKMGKQLLEHRKCGDDVDSGDDIV 240
           +KEVVDVLFKPFLLSM KLPDKVL+GKIKSNLFDV+LK GKQLLE RK GDDVDS DD V
Sbjct: 181 QKEVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTV 240

Query: 241 VYGTLSLTNLFSSTFYELGSSPECCQGNRKVLFALHEEYQKLEKDFISSGIEISIPDLHE 300
           VYGT+SLTN FS+TFYELGSSP+CCQGNRKVLFA+HEE+QKLEKDF SSGIEIS PDL E
Sbjct: 241 VYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300

Query: 301 QDGDEVPTLVPVSSEEEAPSDISMVDVDVTEESTDKALKKQKKNKKATDVSGKKKKAKKA 360
           QDGDEVPTLVP+SS EEAPS+IS+VDVDV  ESTDKALKKQKK+KKATD SG KKKAKKA
Sbjct: 301 QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSG-KKKAKKA 360

Query: 361 KKAKKTINGISDLVSENTPMNKDNENI-VANGENSNNEQISDGNMINFDESVISNLQMQF 420
           KKAKKT NGISDLVSENTP NKDNENI VANGENSNNEQISDGNMI FDE+VISNLQMQF
Sbjct: 361 KKAKKTTNGISDLVSENTPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQF 420

Query: 421 ERVAAEADFEDSVVGPVVSANGSVKKRKRAKNADGQQQTHGLVLPSQVDAEENAAAKSGE 480
           ERVAAEADF  S V PV+S NGSVKKRKRAKN  G+ Q H   LPS+  AE N AAKS E
Sbjct: 421 ERVAAEADFGKSTVSPVISTNGSVKKRKRAKNV-GELQKHDAGLPSEAVAEGNTAAKSEE 480

Query: 481 KSVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPVATKRTK 540
           KSVKKVRFSMKNNLVWKPHNPLPPESLRLPP+VTPRGSALKKGIPPGPILEFP  TKRTK
Sbjct: 481 KSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTK 540

Query: 541 RRAVAMRSKKGVRSLPVKRLKKLKSKTT 568
           RRAV+MR+K GVRSLPVKRLKKLKSK+T
Sbjct: 541 RRAVSMRTKNGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of MS007099 vs. NCBI nr
Match: XP_023538012.1 (ribosomal RNA processing protein 1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 913.7 bits (2360), Expect = 7.9e-262
Identity = 479/566 (84.63%), Postives = 517/566 (91.34%), Query Frame = 0


Query: 3   ELVEGDQDFTSLIKHLASSNKATRDKTLRLIVKTWLPIQTSLSDGDMKKLWKGLFYCVWH 62
           E+VEGDQDFTSLIK LASSNKATRDKTLR+I+KTWLP QTSLSDGDMKKLWKGLFYCVWH
Sbjct: 2   EVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWH 61

Query: 63  ADKFPVQSELINRLSALLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFL 122
           ADK PVQ+ELINRL++LLLHL+LPLA QYFS+FLLTMRREWAGIDALRLDKFYLLIRRF+
Sbjct: 62  ADKLPVQTELINRLASLLLHLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFM 121

Query: 123 HQFFALMKKHSWDLELCRRLIQVLEERVFFTDDKFHGNGVNYHIASVFLEELRPFLPLRK 182
           HQFFAL+KK+SWDLELCRR +QVLEERVFFTDDKFHGNGVNY IASVFLEELRPFLPL K
Sbjct: 122 HQFFALLKKNSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGK 181

Query: 183 EVVDVLFKPFLLSMAKLPDKVLMGKIKSNLFDVLLKMGKQLLEHRKCGDDVDSGDDIVVY 242
           EV+D+LFKPF+LSMAKL DKV++GKIKSNLFDVLLKMGKQLLE RKCG+D++S DDIVVY
Sbjct: 182 EVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLLERRKCGEDINSDDDIVVY 241

Query: 243 GTLSLTNLFSSTFYELGSSPECCQGNRKVLFALHEEYQKLEKDFISSGIEISIPDLHEQD 302
           GT+ LTNLFSSTFYELGSSP+CCQ NRKVLFA+HEEYQKLEK FISSGIEIS+PDL EQD
Sbjct: 242 GTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQD 301

Query: 303 GDEVPTLVPVSSEEEAPSDISMVDVDVTEESTDKALKKQKKNKKATDVSGKKKKAKKAKK 362
           GDEVPTLVP+SSEE     ISM DVDV++E TDKALKK+KK KK +D SGK    KKAKK
Sbjct: 302 GDEVPTLVPISSEE-----ISMADVDVSDEITDKALKKKKKTKKVSDGSGK----KKAKK 361

Query: 363 AKKTINGISDLVSENTPMNKDNENI-VANGENSNNEQISDGNMINFDESVISNLQMQFER 422
           AKK  NGISDLVS NT MNKD+ENI VANGENSNNEQISDGNMI FDESVISNLQMQFER
Sbjct: 362 AKKNTNGISDLVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFER 421

Query: 423 VAAEADFEDSVVGPVVSANGSVKKRKRAKNADGQQQTHGLVLPSQVDAEENAAAKSGEKS 482
           VAAEA+F D+V+ PV+SANGSVKKRKRAK  D  QQTH +VLP+QVD E N AAKSGE S
Sbjct: 422 VAAEAEFGDNVMTPVISANGSVKKRKRAKKVD-VQQTHDVVLPNQVDTEGNTAAKSGENS 481

Query: 483 VKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPVATKRTKRR 542
           VKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFP  TKRTKRR
Sbjct: 482 VKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRR 541

Query: 543 AVAMRSKKGVRSLPVKRLKKLKSKTT 568
           AV MR+KKGVRSLPVKRLKK KSK+T
Sbjct: 542 AVTMRAKKGVRSLPVKRLKKPKSKST 557

[Close]

BLAST of MS007099 vs. ExPASy Swiss-Prot
Match: Q91YK2 (Ribosomal RNA processing protein 1 homolog B OS=Mus musculus OX=10090 GN=Rrp1b PE=1 SV=2)

HSP 1 Score: 118.2 bits (295), Expect = 2.9e-25
Identity = 78/230 (33.91%), Postives = 123/230 (53.48%), Query Frame = 0


Query: 16  KHLASSNKATRDKTLRLIVKTWLPIQT-----SLSDGDMKKLWKGLFYCVWHADKFPVQS 75
           + LASS K  RD+ +R + + +L  +T     S S  ++ K+WKGLFYC+W  D+  +Q 
Sbjct: 14  QRLASSEKGVRDRAVRKL-RQYLSARTQSDTGSFSQEELLKIWKGLFYCMWVQDEPLLQE 73

Query: 76  ELINRLSALLLHLDLPLAVQYFSV--FLLTMRREWAGIDALRLDKFYLLIRRFLHQFFAL 135
           EL N +S  L+H+   L  QY  +  F  TM REW GID L+LDK+Y+LIR  L Q F +
Sbjct: 74  ELANIISQ-LIHVVNSLEAQYLFIQTFWQTMNREWQGIDKLQLDKYYMLIRLVLRQSFEV 133

Query: 136 MKKHSWDLELCRRLIQVLEERVFFTDDKFHGNGVNYHIASVFLEELRPF--LPLRKEVVD 195
           +K+++W+       + +L + +   + +   NGV  H+  V+LEEL       L  +   
Sbjct: 134 LKRNAWEESQITLFLDILMKEILSPESQ-SPNGVRTHLIDVYLEELTTVGGAELLADQNL 193

Query: 196 VLFKPFLLSMAKLPDKVLMGKIKSNLFDVLLKMG----KQLLEHRKCGDD 233
            L  PF    AK  D  L+  +   +F+V++       ++ +E RK  +D
Sbjct: 194 KLIDPFCRIAAKTKDHTLVQTVARGVFEVIVDQSACVPQESVEERKTKED 240

[Close]

BLAST of MS007099 vs. ExPASy Swiss-Prot
Match: Q14684 (Ribosomal RNA processing protein 1 homolog B OS=Homo sapiens OX=9606 GN=RRP1B PE=1 SV=3)

HSP 1 Score: 111.3 bits (277), Expect = 3.6e-23
Identity = 75/239 (31.38%), Postives = 127/239 (53.14%), Query Frame = 0


Query: 16  KHLASSNKATRDKTLRLIVKTWLPIQTSLSDG-----DMKKLWKGLFYCVWHADKFPVQS 75
           + LASS K  RD+ ++ + + ++ ++T    G     ++ K+WKGLFYC+W  D+  +Q 
Sbjct: 14  QRLASSEKGIRDRAVKKL-RQYISVKTQRETGGFSQEELLKIWKGLFYCMWVQDEPLLQE 73

Query: 76  ELINRLSALLLHLDLPLAVQYF-SVFLLTMRREWAGIDALRLDKFYLLIRRFLHQFFALM 135
           EL N ++ L+  ++   A   F   F  TM REW GID LRLDK+Y+LIR  L Q F ++
Sbjct: 74  ELANTIAQLVHAVNNSAAQHLFIQTFWQTMNREWKGIDRLRLDKYYMLIRLVLRQSFEVL 133

Query: 136 KKHSWDLELCRRLIQVLEERVFFTDDKFHGNGVNYHIASVFLEELRPFLPLRKEVVDVLF 195
           K++ W+    +  + VL + V   + +   NGV +H   ++L+EL   +  ++ + D   
Sbjct: 134 KRNGWEESRIKVFLDVLMKEVLCPESQ-SPNGVRFHFIDIYLDELSK-VGGKELLADQNL 193

Query: 196 K---PFLLSMAKLPDKVLMGKIKSNLFDVLLKMG----KQLLEHR--KCGDDVDSGDDI 240
           K   PF    AK  D  L+  I   +F+ ++       ++ +E +  K GD   S ++I
Sbjct: 194 KFIDPFCKIAAKTKDHTLVQTIARGVFEAIVDQSPFVPEETMEEQKTKVGDGDLSAEEI 249

[Close]

BLAST of MS007099 vs. ExPASy Swiss-Prot
Match: P56183 (Ribosomal RNA processing protein 1 homolog A OS=Mus musculus OX=10090 GN=Rrp1 PE=1 SV=2)

HSP 1 Score: 109.8 bits (273), Expect = 1.0e-22
Identity = 74/233 (31.76%), Postives = 115/233 (49.36%), Query Frame = 0


Query: 14  LIKHLASSNKATRDKTLRLIVKTWLPIQTSLSDG-----DMKKLWKGLFYCVWHADKFPV 73
           L + LA + + TRD+ LR + K ++  ++  + G     ++ K+WKGLFYC+W  DK P+
Sbjct: 13  LAQRLAGNEQVTRDRALRKLRK-YIEARSQRATGGFTPDELLKVWKGLFYCMWMQDK-PL 72

Query: 74  QSELINRLSALLLHL--DLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQFF 133
           Q E + R  A L+H         Q+   F  TM REW GID LRLDKFY+L+R  L +  
Sbjct: 73  QQEELGRTIAQLVHAFHTTEAQHQFLKAFWQTMIREWVGIDRLRLDKFYMLMRMVLSESL 132

Query: 134 ALMKKHSWDLELCRRLIQVLEERVFFTDDKFHGNGVNYHIASVFLEELRPF--LPLRKEV 193
             +K   WD     +L+++L   +   D +   +GV  H   +FLEEL       L  + 
Sbjct: 133 KAVKARGWDERQIEQLLELLTTEILNPDSQ-APSGVKSHFLEIFLEELAKVGAAELTADQ 192

Query: 194 VDVLFKPFLLSMAKLPDKVLMGKIKSNLFDVLLKMGKQLLEHRKCGDDVDSGD 238
                 PF    A+  D  ++ KI  ++F  +++     +E      D  SG+
Sbjct: 193 NLQFIDPFCQIAARTKDSQVLHKIIQSIFQTIVEQAPLAIEDIMNELDTQSGE 242

[Close]

BLAST of MS007099 vs. ExPASy Swiss-Prot
Match: P56182 (Ribosomal RNA processing protein 1 homolog A OS=Homo sapiens OX=9606 GN=RRP1 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.5e-21
Identity = 68/222 (30.63%), Postives = 112/222 (50.45%), Query Frame = 0


Query: 14  LIKHLASSNKATRDKTLRLIVKTWLPIQTSLSDG-----DMKKLWKGLFYCVWHADKFPV 73
           L + LA + + TRD+ +R + K ++  +T  + G     ++ K+WKGLFYC+W  DK P+
Sbjct: 13  LAQRLAGNEQVTRDRAVRKLRK-YIVARTQRAAGGFTHDELLKVWKGLFYCMWMQDK-PL 72

Query: 74  QSELINRLSALLLHLDLPLAVQ--YFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQFF 133
             E + R  + L+H       Q  +   F  TM REW GID LRLDKFY+L+R  L++  
Sbjct: 73  LQEELGRTISQLVHAFQTTEAQHLFLQAFWQTMNREWTGIDRLRLDKFYMLMRMVLNESL 132

Query: 134 ALMKKHSWDLELCRRLIQVLEERVFFTDDKFHGNGVNYHIASVFLEELRPFLPLRKEVVD 193
            ++K   W+      L+++L   +     +   NGV  H   +FLEEL   +   +   D
Sbjct: 133 KVLKMQGWEERQIEELLELLMTEILHPSSQ-APNGVKSHFIEIFLEELTK-VGAEELTAD 192

Query: 194 VLFK---PFLLSMAKLPDKVLMGKIKSNLFDVLLKMGKQLLE 226
              K   PF    A+  D +++  I   +F+ +++     +E
Sbjct: 193 QNLKFIDPFCRIAARTKDSLVLNNITRGIFETIVEQAPLAIE 230

[Close]

BLAST of MS007099 vs. ExPASy Swiss-Prot
Match: Q9Y7M6 (Ribosomal RNA-processing protein 1 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC9B6.07 PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 3.4e-21
Identity = 65/168 (38.69%), Postives = 96/168 (57.14%), Query Frame = 0


Query: 15  IKHLASSNKATRDKTLRLIVKTWLPIQTSLSDGDMKKLWKGLFYCVWHADKFPVQSELIN 74
           IK LA++++ TRDK L  + + +L  +      D  KLWKGLFYC+W ADK   Q +L +
Sbjct: 8   IKKLAANDRKTRDKALESL-QRFLSQKKKFERLDFLKLWKGLFYCMWMADKPLYQQKLSD 67

Query: 75  RLSALLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQFFALMKKHSW 134
            L+AL+  + +   + + S F  TM REW GID LR DKFYLL+RRF    F  ++  S 
Sbjct: 68  NLAALVPIVWIDNRILFQSTFWETMGREWTGIDILRTDKFYLLMRRFCAAAFRDIQTRSK 127

Query: 135 DLELCRRLI---QVLEERVFFTDDKFHGNGVNYHIASVFLEELRPFLP 180
              L + +    Q+  +  F T++    NG+ +H+A ++ EELR   P
Sbjct: 128 TALLDKVVAEYNQMWMDGPFNTENLAFPNGILFHLADIWTEELRKVYP 174

[Close]

BLAST of MS007099 vs. ExPASy TrEMBL
Match: A0A6J1D805 (ribosomal RNA processing protein 1 homolog OS=Momordica charantia OX=3673 GN=LOC111018204 PE=4 SV=1)

HSP 1 Score: 1084.3 bits (2803), Expect = 0.0e+00
Identity = 566/567 (99.82%), Postives = 567/567 (100.00%), Query Frame = 0


Query: 1   MEELVEGDQDFTSLIKHLASSNKATRDKTLRLIVKTWLPIQTSLSDGDMKKLWKGLFYCV 60
           MEELVEGDQDFTSLIKHLASSNKATRDKTLRLIVKTWLPIQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEELVEGDQDFTSLIKHLASSNKATRDKTLRLIVKTWLPIQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKFPVQSELINRLSALLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADKFPVQSELINRLSALLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKFPVQSELINRLSALLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALMKKHSWDLELCRRLIQVLEERVFFTDDKFHGNGVNYHIASVFLEELRPFLPL 180
           FLHQFFALMKKHSWDLELCRRLIQVLEERVFFTDDKFHGNGVNYHIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALMKKHSWDLELCRRLIQVLEERVFFTDDKFHGNGVNYHIASVFLEELRPFLPL 180

Query: 181 RKEVVDVLFKPFLLSMAKLPDKVLMGKIKSNLFDVLLKMGKQLLEHRKCGDDVDSGDDIV 240
           RKEVVDVLFKPFLLSMAKLPDKVLMGKIKSNLFDVLLKMGKQLLEHRKCGDDVDSGDDIV
Sbjct: 181 RKEVVDVLFKPFLLSMAKLPDKVLMGKIKSNLFDVLLKMGKQLLEHRKCGDDVDSGDDIV 240

Query: 241 VYGTLSLTNLFSSTFYELGSSPECCQGNRKVLFALHEEYQKLEKDFISSGIEISIPDLHE 300
           VYGTLSLTNLFSSTFYELGSSPECCQGNRKVLFALHEEYQKLEKDFISSGIEISIPDLHE
Sbjct: 241 VYGTLSLTNLFSSTFYELGSSPECCQGNRKVLFALHEEYQKLEKDFISSGIEISIPDLHE 300

Query: 301 QDGDEVPTLVPVSSEEEAPSDISMVDVDVTEESTDKALKKQKKNKKATDVSGKKKKAKKA 360
           QDGDEVPTLVPVSSEEEAPSDISMVDVDVTEESTDKALKKQKKNKKATDVSGKKKKAKKA
Sbjct: 301 QDGDEVPTLVPVSSEEEAPSDISMVDVDVTEESTDKALKKQKKNKKATDVSGKKKKAKKA 360

Query: 361 KKAKKTINGISDLVSENTPMNKDNENIVANGENSNNEQISDGNMINFDESVISNLQMQFE 420
           KKAKKT+NGISDLVSENTPMNKDNENIVANGENSNNEQISDGNMINFDESVISNLQMQFE
Sbjct: 361 KKAKKTMNGISDLVSENTPMNKDNENIVANGENSNNEQISDGNMINFDESVISNLQMQFE 420

Query: 421 RVAAEADFEDSVVGPVVSANGSVKKRKRAKNADGQQQTHGLVLPSQVDAEENAAAKSGEK 480
           RVAAEADFEDSVVGPVVSANGSVKKRKRAKNADGQQQTHGLVLPSQVDAEENAAAKSGEK
Sbjct: 421 RVAAEADFEDSVVGPVVSANGSVKKRKRAKNADGQQQTHGLVLPSQVDAEENAAAKSGEK 480

Query: 481 SVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPVATKRTKR 540
           SVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPVATKRTKR
Sbjct: 481 SVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPVATKRTKR 540

Query: 541 RAVAMRSKKGVRSLPVKRLKKLKSKTT 568
           RAVAMRSKKGVRSLPVKRLKKLKSKTT
Sbjct: 541 RAVAMRSKKGVRSLPVKRLKKLKSKTT 567

[Close]

BLAST of MS007099 vs. ExPASy TrEMBL
Match: A0A5A7U008 (Ribosomal RNA processing protein 1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2754G00010 PE=4 SV=1)

HSP 1 Score: 944.9 bits (2441), Expect = 1.6e-271
Identity = 495/568 (87.15%), Postives = 528/568 (92.96%), Query Frame = 0


Query: 1   MEELVEGDQDFTSLIKHLASSNKATRDKTLRLIVKTWLPIQTSLSDGDMKKLWKGLFYCV 60
           MEE+VEGDQ+FTSL+K LASSNKATRDKTLR+I+KTWLP QTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKFPVQSELINRLSALLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK PVQSELINRL++LLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALMKKHSWDLELCRRLIQVLEERVFFTDDKFHGNGVNYHIASVFLEELRPFLPL 180
           FLHQFFAL+KKHSWDLELCR L+QVLEERVFFTDDKFHGNGVNY IASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL 180

Query: 181 RKEVVDVLFKPFLLSMAKLPDKVLMGKIKSNLFDVLLKMGKQLLEHRKCGDDVDSGDDIV 240
           +KEVVDVLFKPFLLSMAKLPDKVL GKIKSNLFDV+LKMGKQLLE RK GDD+DSGDD  
Sbjct: 181 QKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTA 240

Query: 241 VYGTLSLTNLFSSTFYELGSSPECCQGNRKVLFALHEEYQKLEKDFISSGIEISIPDLHE 300
           VYGT+SLTN FS+TFYELGSSP+CCQGNRKVLFA+HEE+QKLEKDF SSGIEIS PDL E
Sbjct: 241 VYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300

Query: 301 QDGDEVPTLVPVSSEEEAPSDISMVDVDVTEESTDKALKKQKKNKKATDVSGKKKKAKKA 360
           QDGDEVPTLVP+ SEEEAPS+ISMVDVDV  ESTDKALKKQK++KKATD SG KKKAKKA
Sbjct: 301 QDGDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSG-KKKAKKA 360

Query: 361 KKAKKTINGISDLVSENTPMNKDNENI-VANGENSNNEQISDGNMINFDESVISNLQMQF 420
           KKAKKT NGISDLVSEN+P NKDNENI VANGENSNNEQISDGNMI FDE+VISNLQMQF
Sbjct: 361 KKAKKTTNGISDLVSENSPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQF 420

Query: 421 ERVAAEADFEDSVVGPVVSANGSVKKRKRAKNADGQQQTHGLVLPSQVDAEENAAAKSGE 480
           E+VAAEADF DS+V PV+S NGSVKKRKRAKN D + Q H + LPS+  AE N AAKS E
Sbjct: 421 EKVAAEADFGDSIVSPVISTNGSVKKRKRAKNVD-ELQKHDVALPSEAQAEGNTAAKSEE 480

Query: 481 KSVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPVATKRTK 540
           KSVKKVRFSMKNNLVWKPHNPLPPESLRLPP+VTPRGSALKKGIPPGPILEFP  TKRTK
Sbjct: 481 KSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTK 540

Query: 541 RRAVAMRSKKGVRSLPVKRLKKLKSKTT 568
           RRAV+MR+KKGVRSLPVKRLKKLKSK+T
Sbjct: 541 RRAVSMRTKKGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of MS007099 vs. ExPASy TrEMBL
Match: A0A1S3BR64 (ribosomal RNA processing protein 1 homolog OS=Cucumis melo OX=3656 GN=LOC103492297 PE=4 SV=1)

HSP 1 Score: 944.9 bits (2441), Expect = 1.6e-271
Identity = 495/568 (87.15%), Postives = 528/568 (92.96%), Query Frame = 0


Query: 1   MEELVEGDQDFTSLIKHLASSNKATRDKTLRLIVKTWLPIQTSLSDGDMKKLWKGLFYCV 60
           MEE+VEGDQ+FTSL+K LASSNKATRDKTLR+I+KTWLP QTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKFPVQSELINRLSALLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK PVQSELINRL++LLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALMKKHSWDLELCRRLIQVLEERVFFTDDKFHGNGVNYHIASVFLEELRPFLPL 180
           FLHQFFAL+KKHSWDLELCR L+QVLEERVFFTDDKFHGNGVNY IASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL 180

Query: 181 RKEVVDVLFKPFLLSMAKLPDKVLMGKIKSNLFDVLLKMGKQLLEHRKCGDDVDSGDDIV 240
           +KEVVDVLFKPFLLSMAKLPDKVL GKIKSNLFDV+LKMGKQLLE RK GDD+DSGDD  
Sbjct: 181 QKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTA 240

Query: 241 VYGTLSLTNLFSSTFYELGSSPECCQGNRKVLFALHEEYQKLEKDFISSGIEISIPDLHE 300
           VYGT+SLTN FS+TFYELGSSP+CCQGNRKVLFA+HEE+QKLEKDF SSGIEIS PDL E
Sbjct: 241 VYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300

Query: 301 QDGDEVPTLVPVSSEEEAPSDISMVDVDVTEESTDKALKKQKKNKKATDVSGKKKKAKKA 360
           QDGDEVPTLVP+ SEEEAPS+ISMVDVDV  ESTDKALKKQK++KKATD SG KKKAKKA
Sbjct: 301 QDGDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSG-KKKAKKA 360

Query: 361 KKAKKTINGISDLVSENTPMNKDNENI-VANGENSNNEQISDGNMINFDESVISNLQMQF 420
           KKAKKT NGISDLVSEN+P NKDNENI VANGENSNNEQISDGNMI FDE+VISNLQMQF
Sbjct: 361 KKAKKTTNGISDLVSENSPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQF 420

Query: 421 ERVAAEADFEDSVVGPVVSANGSVKKRKRAKNADGQQQTHGLVLPSQVDAEENAAAKSGE 480
           E+VAAEADF DS+V PV+S NGSVKKRKRAKN D + Q H + LPS+  AE N AAKS E
Sbjct: 421 EKVAAEADFGDSIVSPVISTNGSVKKRKRAKNVD-ELQKHDVALPSEAQAEGNTAAKSEE 480

Query: 481 KSVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPVATKRTK 540
           KSVKKVRFSMKNNLVWKPHNPLPPESLRLPP+VTPRGSALKKGIPPGPILEFP  TKRTK
Sbjct: 481 KSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTK 540

Query: 541 RRAVAMRSKKGVRSLPVKRLKKLKSKTT 568
           RRAV+MR+KKGVRSLPVKRLKKLKSK+T
Sbjct: 541 RRAVSMRTKKGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of MS007099 vs. ExPASy TrEMBL
Match: A0A0A0LGX3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G062650 PE=4 SV=1)

HSP 1 Score: 931.0 bits (2405), Expect = 2.3e-267
Identity = 492/568 (86.62%), Postives = 523/568 (92.08%), Query Frame = 0


Query: 1   MEELVEGDQDFTSLIKHLASSNKATRDKTLRLIVKTWLPIQTSLSDGDMKKLWKGLFYCV 60
           MEE+VEGDQ+FTSL+K LASSNKATRDKTLR+I+KTWLP QTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKFPVQSELINRLSALLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK PVQSELINRL++LLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALMKKHSWDLELCRRLIQVLEERVFFTDDKFHGNGVNYHIASVFLEELRPFLPL 180
           FLHQFFAL+KKHSWDLELCRRL+QVLEERV+F +DKFHGNGVNY IASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPL 180

Query: 181 RKEVVDVLFKPFLLSMAKLPDKVLMGKIKSNLFDVLLKMGKQLLEHRKCGDDVDSGDDIV 240
           +KEVVDVLFKPFLLSM KLPDKVL+GKIKSNLFDV+LK GKQLLE RK GDDVDS DD V
Sbjct: 181 QKEVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTV 240

Query: 241 VYGTLSLTNLFSSTFYELGSSPECCQGNRKVLFALHEEYQKLEKDFISSGIEISIPDLHE 300
           VYGT+SLTN FS+TFYELGSSP+CCQGNRKVLFA+HEE+QKLEKDF SSGIEIS PDL E
Sbjct: 241 VYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300

Query: 301 QDGDEVPTLVPVSSEEEAPSDISMVDVDVTEESTDKALKKQKKNKKATDVSGKKKKAKKA 360
           QDGDEVPTLVP+SS EEAPS+IS+VDVDV  ESTDKALKKQKK+KKATD SG KKKAKKA
Sbjct: 301 QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSG-KKKAKKA 360

Query: 361 KKAKKTINGISDLVSENTPMNKDNENI-VANGENSNNEQISDGNMINFDESVISNLQMQF 420
           KKAKKT NGISDLVSENTP NKDNENI VANGENSNNEQISDGNMI FDE+VISNLQMQF
Sbjct: 361 KKAKKTTNGISDLVSENTPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQF 420

Query: 421 ERVAAEADFEDSVVGPVVSANGSVKKRKRAKNADGQQQTHGLVLPSQVDAEENAAAKSGE 480
           ERVAAEADF  S V PV+S NGSVKKRKRAKN  G+ Q H   LPS+  AE N AAKS E
Sbjct: 421 ERVAAEADFGKSTVSPVISTNGSVKKRKRAKNV-GELQKHDAGLPSEAVAEGNTAAKSEE 480

Query: 481 KSVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPVATKRTK 540
           KSVKKVRFSMKNNLVWKPHNPLPPESLRLPP+VTPRGSALKKGIPPGPILEFP  TKRTK
Sbjct: 481 KSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTK 540

Query: 541 RRAVAMRSKKGVRSLPVKRLKKLKSKTT 568
           RRAV+MR+K GVRSLPVKRLKKLKSK+T
Sbjct: 541 RRAVSMRTKNGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of MS007099 vs. ExPASy TrEMBL
Match: A0A6J1HNW4 (ribosomal RNA processing protein 1 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465388 PE=4 SV=1)

HSP 1 Score: 911.0 bits (2353), Expect = 2.5e-261
Identity = 478/566 (84.45%), Postives = 517/566 (91.34%), Query Frame = 0


Query: 3   ELVEGDQDFTSLIKHLASSNKATRDKTLRLIVKTWLPIQTSLSDGDMKKLWKGLFYCVWH 62
           E+VEGDQDFTSLIK LASSNKATRDKTLR+I+KTWLP QTSLSDGDMKKLWKGLFYCVWH
Sbjct: 2   EVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWH 61

Query: 63  ADKFPVQSELINRLSALLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFL 122
           ADK  VQ+ELINRL++LLLHL+LPLA QYFS+FL+TMRREWAGIDALRLDKFYLLIRRF+
Sbjct: 62  ADKLHVQTELINRLASLLLHLELPLAFQYFSIFLVTMRREWAGIDALRLDKFYLLIRRFM 121

Query: 123 HQFFALMKKHSWDLELCRRLIQVLEERVFFTDDKFHGNGVNYHIASVFLEELRPFLPLRK 182
           HQFFAL+KK+SWDLELCRR +QVLEERVFFTDDKFHGNGVNY IASVFLEELRPFLPL K
Sbjct: 122 HQFFALLKKNSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGK 181

Query: 183 EVVDVLFKPFLLSMAKLPDKVLMGKIKSNLFDVLLKMGKQLLEHRKCGDDVDSGDDIVVY 242
           EV+D++FKPF+LSMAKL DKV++GKIKSNLFDVLLKMGKQLLE RKCG+D++S DDIVVY
Sbjct: 182 EVIDIVFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLLERRKCGEDINSDDDIVVY 241

Query: 243 GTLSLTNLFSSTFYELGSSPECCQGNRKVLFALHEEYQKLEKDFISSGIEISIPDLHEQD 302
           GT+ LTNLFSSTFYELGSSP+CCQ NRKVLFA+HEEYQKLEK FISSGIEIS+PDL EQD
Sbjct: 242 GTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQD 301

Query: 303 GDEVPTLVPVSSEEEAPSDISMVDVDVTEESTDKALKKQKKNKKATDVSGKKKKAKKAKK 362
           GDEVPTLVP+SSEE     ISM DVDV++E TDKALKK+KK KKATD SGK    KK KK
Sbjct: 302 GDEVPTLVPISSEE-----ISMADVDVSDEITDKALKKKKKTKKATDGSGK----KKTKK 361

Query: 363 AKKTINGISDLVSENTPMNKDNENI-VANGENSNNEQISDGNMINFDESVISNLQMQFER 422
           AKK  NGISDLVS NT MNKD+ENI VANGENSNNEQISDGNMI FDESVISNLQMQFER
Sbjct: 362 AKKNTNGISDLVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFER 421

Query: 423 VAAEADFEDSVVGPVVSANGSVKKRKRAKNADGQQQTHGLVLPSQVDAEENAAAKSGEKS 482
           VAAEA+F D+V+ PV+SANGSVKKRKRAK AD  QQTH +VLP+QVD E N AAKSGE S
Sbjct: 422 VAAEAEFGDNVMSPVISANGSVKKRKRAKKAD-VQQTHDVVLPNQVDTEGNTAAKSGENS 481

Query: 483 VKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPVATKRTKRR 542
           VKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFP  TKRTKRR
Sbjct: 482 VKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRR 541

Query: 543 AVAMRSKKGVRSLPVKRLKKLKSKTT 568
           AVAMR+KKGVRSLPVKR KK KSK+T
Sbjct: 542 AVAMRAKKGVRSLPVKRSKKPKSKST 557

[Close]

BLAST of MS007099 vs. TAIR 10
Match: AT5G20600.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: preribosome, small subunit precursor; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleolar, Nop52 (InterPro:IPR010301); Has 543 Blast hits to 530 proteins in 201 species: Archae - 0; Bacteria - 10; Metazoa - 211; Fungi - 164; Plants - 46; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). )

HSP 1 Score: 478.0 bits (1229), Expect = 1.0e-134
Identity = 287/567 (50.62%), Postives = 373/567 (65.78%), Query Frame = 0


Query: 2   EELVEGDQDFTSLIKHLASSNKATRDKTLRLIVKTWLPIQTSLSDGDMKKLWKGLFYCVW 61
           E+ +  ++D  SLIK LAS  ++ RD++LR +++TWLP QT +SD DMKKLW+G+FYCVW
Sbjct: 11  EQALPIEEDCKSLIKKLASCKQSIRDRSLRTVLRTWLPEQTEISDEDMKKLWQGIFYCVW 70

Query: 62  HADKFPVQSELINRLSALLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRF 121
           HADK   QSELI+RLS+ L  L LPL++ YF+VFL TMRREW+ ID LRLDKFYLLIRRF
Sbjct: 71  HADKSLYQSELIDRLSSALQSLPLPLSIHYFTVFLFTMRREWSRIDRLRLDKFYLLIRRF 130

Query: 122 LHQFFALMKKHSWDLELCRRLIQVLEERVFFTDDKFHGNGVNYHIASVFLEELRPFLPLR 181
           LH FF+L+  +SWDLE  RRL+ +L +     DDKF GNGVNYHI S F+EELRPFLPLR
Sbjct: 131 LHGFFSLIDSNSWDLEFTRRLMGILFDGTLLADDKFQGNGVNYHITSAFVEELRPFLPLR 190

Query: 182 KEVVDVLFKPFLLSMAKLPDKVLMGKIKSNLFDVLLKMGKQLLEHRKCGDD-VDSGDDIV 241
           KEV+++LF PF+  M  + DK+L+GKIKSNLFD LLKMGK+LL  ++ GDD V   DD+V
Sbjct: 191 KEVLELLFAPFVKIMGVVNDKILVGKIKSNLFDELLKMGKKLLIIKQSGDDAVPEDDDVV 250

Query: 242 VYGTLSLTNLFSSTFYELGSSPECCQGNRKVLFALHEEYQKLEKDFISSGIEISIPDLHE 301
           V G+++L+  F+  FYELGSSPEC QGNRK++FALH+E+ +LEKD  SS IE+SI +   
Sbjct: 251 VLGSIALSMEFAKRFYELGSSPECHQGNRKLIFALHKEFLQLEKDMSSSSIEVSIVEASR 310

Query: 302 QDGDEVPTLVPVSSEEEAPSDISMVDVDVTEESTDKALKKQKKNKKATDVSGKKKKAKKA 361
              DEVP  VPVS                  ES    + K KK   A   S KKK  KK 
Sbjct: 311 PGNDEVPESVPVS------------------ESNTNVVSKSKK-IVANGSSSKKKGLKKC 370

Query: 362 KKAKKTINGISDLVSENTPMNKDNENIVANGENSNNEQISDGNMINFDESVISNLQMQFE 421
            K KK      D V +   M    +++V  G              +FDE++IS+L+ +FE
Sbjct: 371 SKTKK------DSVKKGAVM----DSVVDLGNKDE----------SFDETMISDLRQEFE 430

Query: 422 RVAAEADFEDSVVGPV------VSANGSVKKRKRAKNADGQQQTHGLVLPSQVDAEENAA 481
           ++A+E     S V  V      VS +   KKRKR    + Q  T      ++  AE + A
Sbjct: 431 KIASEMSPSKSEVASVCDVAEPVSVSKKTKKRKRENKGEEQVST-----VNRDAAETSLA 490

Query: 482 AKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPVA 541
             S EKS K+VRF+MKNNLVWKPH PLPP+ LR PP+ TPRGSALK+GIP GP+ E  +A
Sbjct: 491 GPSSEKSSKRVRFAMKNNLVWKPHCPLPPQDLRCPPSATPRGSALKQGIPAGPVRE--LA 528

Query: 542 TKRTKRRAVAMRSKKGVRSLPVKRLKK 562
           +++TK++ V   +++GV+S  +K LKK
Sbjct: 551 SRKTKKK-VKPAARRGVKS--IKNLKK 528

The following BLAST results are available for this feature:

BLAST of MS007099 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149903.1	0.0e+00	99.82	ribosomal RNA processing protein 1 homolog [Momordica charantia]	[more]
XP_038875379.1	5.3e-274	87.50	ribosomal RNA processing protein 1 homolog [Benincasa hispida]	[more]
XP_008450828.1	3.2e-271	87.15	PREDICTED: ribosomal RNA processing protein 1 homolog [Cucumis melo] >KAA0047556...	[more]
XP_004150388.1	4.8e-267	86.62	ribosomal RNA processing protein 1 homolog [Cucumis sativus]	[more]
XP_023538012.1	7.9e-262	84.63	ribosomal RNA processing protein 1 homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS007099 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q91YK2	2.9e-25	33.91	Ribosomal RNA processing protein 1 homolog B OS=Mus musculus OX=10090 GN=Rrp1b P...	[more]
Q14684	3.6e-23	31.38	Ribosomal RNA processing protein 1 homolog B OS=Homo sapiens OX=9606 GN=RRP1B PE...	[more]
P56183	1.0e-22	31.76	Ribosomal RNA processing protein 1 homolog A OS=Mus musculus OX=10090 GN=Rrp1 PE...	[more]
P56182	1.5e-21	30.63	Ribosomal RNA processing protein 1 homolog A OS=Homo sapiens OX=9606 GN=RRP1 PE=...	[more]
Q9Y7M6	3.4e-21	38.69	Ribosomal RNA-processing protein 1 homolog OS=Schizosaccharomyces pombe (strain ...	[more]

BLAST of MS007099 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D805	0.0e+00	99.82	ribosomal RNA processing protein 1 homolog OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A5A7U008	1.6e-271	87.15	Ribosomal RNA processing protein 1-like protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3BR64	1.6e-271	87.15	ribosomal RNA processing protein 1 homolog OS=Cucumis melo OX=3656 GN=LOC1034922...	[more]
A0A0A0LGX3	2.3e-267	86.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G062650 PE=4 SV=1	[more]
A0A6J1HNW4	2.5e-261	84.45	ribosomal RNA processing protein 1 homolog isoform X1 OS=Cucurbita maxima OX=366...	[more]

BLAST of MS007099 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20600.1	1.0e-134	50.62	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED ...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010301	Nucleolar, Nop52	PFAM	PF05997	Nop52	coord: 13..214 e-value: 1.0E-55 score: 188.9
IPR010301	Nucleolar, Nop52	PANTHER	PTHR13026	NNP-1 PROTEIN NOVEL NUCLEAR PROTEIN 1 NOP52	coord: 13..554
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 370..401
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 335..401
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 539..567
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 496..527
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 346..364
None	No IPR available	PANTHER	PTHR13026:SF0	RIBOSOMAL RNA-PROCESSING 1	coord: 13..554

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS007099.1	MS007099.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0030688	preribosome, small subunit precursor