MS007091 (gene) Bitter gourd (TR) v1

Overview
NameMS007091
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationscaffold25: 57178 .. 58326 (-)
RNA-Seq ExpressionMS007091
SyntenyMS007091
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGCAGGACAAAGGAGAAGGAAGTTTTGTTGATGATGATTTTTATGCCGACCATTCCCAAATGATTAAAAAGTTGAGCGAAAGACGATTGCCTGTTTTAGCTCAAGAGATTTTCTGGGAGCTGAAGTCCGAAGGTTCTCCACTAAAAAACTCTACGTTGTCTACTCTTATGGAATCCTACATAGATGGTGGTCGTCTCCTCCAAGCACAAGCAATTTGGCAAGAAATGTTAAACAGCTCTTTCGTTCCTTCTGTTAATCTAATTTCAAAGTTATTTCACACTTTTGGAAAGATGGGACGGTTTGATGATATAATTAAAGTTCTGGATCAGGTAAAGCTAAGGTATTCACATTTACTGCCTGAGGCATTTTCACTAGCCATTTCATGTTTTGGGAAGCATGGACAACTGGAATTGATGGAAAATACTTTGAGGGAAATGGTTTCCAGTGGTTTTCCAGTCAATTCCGCTACTGGCAATTCGTTTATTATACACTACAGCATTTTCGGTTCTTTGATGGAGATGGAAACTGCCTACGGTCGCCTTAAAAGGTCGAGGTTTCTAATTGAGAAGGAAGGAATCATGGCAATGGCATTTGCTTATCTAAGGAAAAGAAAATTTTACAGGTTAGGTGAATTCCTTAGGGATGTTGGTCTTGGAAGGAGAAACGTGGGGAATCTTCTATGGAATCTTCTTCTTCTGTCCTACGCTGCCAATTTTAAAATGAAGAGTTTGCAGCGAGAATTTCTGAGAATGGTTGAAGCTGGGTTTCATCCGGATCTGACCACTTTCAATATTAGAGCCTTAGCATTTTCAAGAATGGATTTGTTATGGGATCTTCATCTTAGCCTTGAACATATGGAACACGTGAAGATTGAACCCGATCTCGTGACCTACGGCTGCGTTGTTGATGCATATGTAGATAGAAGACTTGGAAGAAATCTGGATTTTGCCTTGAGCAAAATGAATCCTGACCAACCTCCAGTGTCATTAACAGAATCATTCGTTTTCGAGGCATTGGGAAAAGGAGATTTCCACATGAGCTCGGAGGCGTTTATGCAATTCCAGAGGCAGAAGAAATGGACCTATAGAGAGTTAATATCATTGTATCTGAAAAGGCAATACAGGAGAGATCAAGTCTTCTGGAATTAC

mRNA sequence

TGGCAGGACAAAGGAGAAGGAAGTTTTGTTGATGATGATTTTTATGCCGACCATTCCCAAATGATTAAAAAGTTGAGCGAAAGACGATTGCCTGTTTTAGCTCAAGAGATTTTCTGGGAGCTGAAGTCCGAAGGTTCTCCACTAAAAAACTCTACGTTGTCTACTCTTATGGAATCCTACATAGATGGTGGTCGTCTCCTCCAAGCACAAGCAATTTGGCAAGAAATGTTAAACAGCTCTTTCGTTCCTTCTGTTAATCTAATTTCAAAGTTATTTCACACTTTTGGAAAGATGGGACGGTTTGATGATATAATTAAAGTTCTGGATCAGGTAAAGCTAAGGTATTCACATTTACTGCCTGAGGCATTTTCACTAGCCATTTCATGTTTTGGGAAGCATGGACAACTGGAATTGATGGAAAATACTTTGAGGGAAATGGTTTCCAGTGGTTTTCCAGTCAATTCCGCTACTGGCAATTCGTTTATTATACACTACAGCATTTTCGGTTCTTTGATGGAGATGGAAACTGCCTACGGTCGCCTTAAAAGGTCGAGGTTTCTAATTGAGAAGGAAGGAATCATGGCAATGGCATTTGCTTATCTAAGGAAAAGAAAATTTTACAGGTTAGGTGAATTCCTTAGGGATGTTGGTCTTGGAAGGAGAAACGTGGGGAATCTTCTATGGAATCTTCTTCTTCTGTCCTACGCTGCCAATTTTAAAATGAAGAGTTTGCAGCGAGAATTTCTGAGAATGGTTGAAGCTGGGTTTCATCCGGATCTGACCACTTTCAATATTAGAGCCTTAGCATTTTCAAGAATGGATTTGTTATGGGATCTTCATCTTAGCCTTGAACATATGGAACACGTGAAGATTGAACCCGATCTCGTGACCTACGGCTGCGTTGTTGATGCATATGTAGATAGAAGACTTGGAAGAAATCTGGATTTTGCCTTGAGCAAAATGAATCCTGACCAACCTCCAGTGTCATTAACAGAATCATTCGTTTTCGAGGCATTGGGAAAAGGAGATTTCCACATGAGCTCGGAGGCGTTTATGCAATTCCAGAGGCAGAAGAAATGGACCTATAGAGAGTTAATATCATTGTATCTGAAAAGGCAATACAGGAGAGATCAAGTCTTCTGGAATTAC

Coding sequence (CDS)

TGGCAGGACAAAGGAGAAGGAAGTTTTGTTGATGATGATTTTTATGCCGACCATTCCCAAATGATTAAAAAGTTGAGCGAAAGACGATTGCCTGTTTTAGCTCAAGAGATTTTCTGGGAGCTGAAGTCCGAAGGTTCTCCACTAAAAAACTCTACGTTGTCTACTCTTATGGAATCCTACATAGATGGTGGTCGTCTCCTCCAAGCACAAGCAATTTGGCAAGAAATGTTAAACAGCTCTTTCGTTCCTTCTGTTAATCTAATTTCAAAGTTATTTCACACTTTTGGAAAGATGGGACGGTTTGATGATATAATTAAAGTTCTGGATCAGGTAAAGCTAAGGTATTCACATTTACTGCCTGAGGCATTTTCACTAGCCATTTCATGTTTTGGGAAGCATGGACAACTGGAATTGATGGAAAATACTTTGAGGGAAATGGTTTCCAGTGGTTTTCCAGTCAATTCCGCTACTGGCAATTCGTTTATTATACACTACAGCATTTTCGGTTCTTTGATGGAGATGGAAACTGCCTACGGTCGCCTTAAAAGGTCGAGGTTTCTAATTGAGAAGGAAGGAATCATGGCAATGGCATTTGCTTATCTAAGGAAAAGAAAATTTTACAGGTTAGGTGAATTCCTTAGGGATGTTGGTCTTGGAAGGAGAAACGTGGGGAATCTTCTATGGAATCTTCTTCTTCTGTCCTACGCTGCCAATTTTAAAATGAAGAGTTTGCAGCGAGAATTTCTGAGAATGGTTGAAGCTGGGTTTCATCCGGATCTGACCACTTTCAATATTAGAGCCTTAGCATTTTCAAGAATGGATTTGTTATGGGATCTTCATCTTAGCCTTGAACATATGGAACACGTGAAGATTGAACCCGATCTCGTGACCTACGGCTGCGTTGTTGATGCATATGTAGATAGAAGACTTGGAAGAAATCTGGATTTTGCCTTGAGCAAAATGAATCCTGACCAACCTCCAGTGTCATTAACAGAATCATTCGTTTTCGAGGCATTGGGAAAAGGAGATTTCCACATGAGCTCGGAGGCGTTTATGCAATTCCAGAGGCAGAAGAAATGGACCTATAGAGAGTTAATATCATTGTATCTGAAAAGGCAATACAGGAGAGATCAAGTCTTCTGGAATTAC

Protein sequence

WQDKGEGSFVDDDFYADHSQMIKKLSERRLPVLAQEIFWELKSEGSPLKNSTLSTLMESYIDGGRLLQAQAIWQEMLNSSFVPSVNLISKLFHTFGKMGRFDDIIKVLDQVKLRYSHLLPEAFSLAISCFGKHGQLELMENTLREMVSSGFPVNSATGNSFIIHYSIFGSLMEMETAYGRLKRSRFLIEKEGIMAMAFAYLRKRKFYRLGEFLRDVGLGRRNVGNLLWNLLLLSYAANFKMKSLQREFLRMVEAGFHPDLTTFNIRALAFSRMDLLWDLHLSLEHMEHVKIEPDLVTYGCVVDAYVDRRLGRNLDFALSKMNPDQPPVSLTESFVFEALGKGDFHMSSEAFMQFQRQKKWTYRELISLYLKRQYRRDQVFWNY
Homology
BLAST of MS007091 vs. NCBI nr
Match: XP_022149915.1 (pentatricopeptide repeat-containing protein At3g42630 isoform X1 [Momordica charantia])

HSP 1 Score: 760.0 bits (1961), Expect = 9.9e-216
Identity = 379/382 (99.21%), Postives = 381/382 (99.74%), Query Frame = 0

Query: 2   QDKGEGSFVDDDFYADHSQMIKKLSERRLPVLAQEIFWELKSEGSPLKNSTLSTLMESYI 61
           +DKGEGSFVDDDFYADHSQMIKKLSERRLPVLAQEIFWELKSEGSPLKNSTLSTLMESYI
Sbjct: 41  KDKGEGSFVDDDFYADHSQMIKKLSERRLPVLAQEIFWELKSEGSPLKNSTLSTLMESYI 100

Query: 62  DGGRLLQAQAIWQEMLNSSFVPSVNLISKLFHTFGKMGRFDDIIKVLDQVKLRYSHLLPE 121
           DGGRLLQAQAIW+EMLNSSFVPSVNLISKLFHTFGKMGRFDDIIKVLDQVKLRYSHLLPE
Sbjct: 101 DGGRLLQAQAIWEEMLNSSFVPSVNLISKLFHTFGKMGRFDDIIKVLDQVKLRYSHLLPE 160

Query: 122 AFSLAISCFGKHGQLELMENTLREMVSSGFPVNSATGNSFIIHYSIFGSLMEMETAYGRL 181
           AFSLAISCFGKHGQLELMENTLREMVSSGFPVNSATGNSFIIHYSIFGSLMEMETAYGRL
Sbjct: 161 AFSLAISCFGKHGQLELMENTLREMVSSGFPVNSATGNSFIIHYSIFGSLMEMETAYGRL 220

Query: 182 KRSRFLIEKEGIMAMAFAYLRKRKFYRLGEFLRDVGLGRRNVGNLLWNLLLLSYAANFKM 241
           KRSRFLIEKEGIMAMAFAYLRKRKFYRLGEFLRDVGLGRRNVGNLLWNLLLLSYAANFKM
Sbjct: 221 KRSRFLIEKEGIMAMAFAYLRKRKFYRLGEFLRDVGLGRRNVGNLLWNLLLLSYAANFKM 280

Query: 242 KSLQREFLRMVEAGFHPDLTTFNIRALAFSRMDLLWDLHLSLEHMEHVKIEPDLVTYGCV 301
           KSLQREFLRMVEAGFHPDLTTFNIRALAFSRMDLLWDLHLSLEHMEHVKIEPDLVTYGCV
Sbjct: 281 KSLQREFLRMVEAGFHPDLTTFNIRALAFSRMDLLWDLHLSLEHMEHVKIEPDLVTYGCV 340

Query: 302 VDAYVDRRLGRNLDFALSKMNPDQPPVSLTESFVFEALGKGDFHMSSEAFMQFQRQKKWT 361
           VDAYVDRRLGRNLDFALSKMNPDQ PVSLTESFVFEALGKGDFHMSSEAFMQFQRQKKWT
Sbjct: 341 VDAYVDRRLGRNLDFALSKMNPDQTPVSLTESFVFEALGKGDFHMSSEAFMQFQRQKKWT 400

Query: 362 YRELISLYLKRQYRRDQVFWNY 384
           YRELISLYLKRQYRRDQVFWNY
Sbjct: 401 YRELISLYLKRQYRRDQVFWNY 422

BLAST of MS007091 vs. NCBI nr
Match: XP_022149916.1 (pentatricopeptide repeat-containing protein At3g42630 isoform X2 [Momordica charantia] >XP_022149917.1 pentatricopeptide repeat-containing protein At3g42630 isoform X2 [Momordica charantia] >XP_022149918.1 pentatricopeptide repeat-containing protein At3g42630 isoform X2 [Momordica charantia])

HSP 1 Score: 721.8 bits (1862), Expect = 3.0e-204
Identity = 361/363 (99.45%), Postives = 362/363 (99.72%), Query Frame = 0

Query: 21  MIKKLSERRLPVLAQEIFWELKSEGSPLKNSTLSTLMESYIDGGRLLQAQAIWQEMLNSS 80
           MIKKLSERRLPVLAQEIFWELKSEGSPLKNSTLSTLMESYIDGGRLLQAQAIW+EMLNSS
Sbjct: 1   MIKKLSERRLPVLAQEIFWELKSEGSPLKNSTLSTLMESYIDGGRLLQAQAIWEEMLNSS 60

Query: 81  FVPSVNLISKLFHTFGKMGRFDDIIKVLDQVKLRYSHLLPEAFSLAISCFGKHGQLELME 140
           FVPSVNLISKLFHTFGKMGRFDDIIKVLDQVKLRYSHLLPEAFSLAISCFGKHGQLELME
Sbjct: 61  FVPSVNLISKLFHTFGKMGRFDDIIKVLDQVKLRYSHLLPEAFSLAISCFGKHGQLELME 120

Query: 141 NTLREMVSSGFPVNSATGNSFIIHYSIFGSLMEMETAYGRLKRSRFLIEKEGIMAMAFAY 200
           NTLREMVSSGFPVNSATGNSFIIHYSIFGSLMEMETAYGRLKRSRFLIEKEGIMAMAFAY
Sbjct: 121 NTLREMVSSGFPVNSATGNSFIIHYSIFGSLMEMETAYGRLKRSRFLIEKEGIMAMAFAY 180

Query: 201 LRKRKFYRLGEFLRDVGLGRRNVGNLLWNLLLLSYAANFKMKSLQREFLRMVEAGFHPDL 260
           LRKRKFYRLGEFLRDVGLGRRNVGNLLWNLLLLSYAANFKMKSLQREFLRMVEAGFHPDL
Sbjct: 181 LRKRKFYRLGEFLRDVGLGRRNVGNLLWNLLLLSYAANFKMKSLQREFLRMVEAGFHPDL 240

Query: 261 TTFNIRALAFSRMDLLWDLHLSLEHMEHVKIEPDLVTYGCVVDAYVDRRLGRNLDFALSK 320
           TTFNIRALAFSRMDLLWDLHLSLEHMEHVKIEPDLVTYGCVVDAYVDRRLGRNLDFALSK
Sbjct: 241 TTFNIRALAFSRMDLLWDLHLSLEHMEHVKIEPDLVTYGCVVDAYVDRRLGRNLDFALSK 300

Query: 321 MNPDQPPVSLTESFVFEALGKGDFHMSSEAFMQFQRQKKWTYRELISLYLKRQYRRDQVF 380
           MNPDQ PVSLTESFVFEALGKGDFHMSSEAFMQFQRQKKWTYRELISLYLKRQYRRDQVF
Sbjct: 301 MNPDQTPVSLTESFVFEALGKGDFHMSSEAFMQFQRQKKWTYRELISLYLKRQYRRDQVF 360

Query: 381 WNY 384
           WNY
Sbjct: 361 WNY 363

BLAST of MS007091 vs. NCBI nr
Match: KAG7020945.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 663.3 bits (1710), Expect = 1.3e-186
Identity = 328/382 (85.86%), Postives = 358/382 (93.72%), Query Frame = 0

Query: 2   QDKGEGSFVDDDFYADHSQMIKKLSERRLPVLAQEIFWELKSEGSPLKNSTLSTLMESYI 61
           Q+K +GSF  DDF  +HSQ+I+KLS+RR PVLAQEIF ELKSE  PL NSTLS+LM  YI
Sbjct: 45  QNKEKGSFAGDDFSINHSQVIEKLSQRRTPVLAQEIFLELKSEDFPLNNSTLSSLMVRYI 104

Query: 62  DGGRLLQAQAIWQEMLNSSFVPSVNLISKLFHTFGKMGRFDDIIKVLDQVKLRYSHLLPE 121
           DGG LLQA+AIW+EMLNS FVPSV +ISKL +T+GKM RFDDIIKVLDQVKLRY HLLPE
Sbjct: 105 DGGLLLQAEAIWEEMLNSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKLRYLHLLPE 164

Query: 122 AFSLAISCFGKHGQLELMENTLREMVSSGFPVNSATGNSFIIHYSIFGSLMEMETAYGRL 181
           A+SLAISCFGKHGQLELMENTLREMVSSG PV+S TGNSFI++YSIFGSLMEMETAYGRL
Sbjct: 165 AYSLAISCFGKHGQLELMENTLREMVSSGVPVDSRTGNSFIVYYSIFGSLMEMETAYGRL 224

Query: 182 KRSRFLIEKEGIMAMAFAYLRKRKFYRLGEFLRDVGLGRRNVGNLLWNLLLLSYAANFKM 241
           KRSRFLIEKEGI+AMAFAY+R+RKFYRLGEFLRDVGL R+NVGNLLWNLLLLSYAANFKM
Sbjct: 225 KRSRFLIEKEGILAMAFAYIRERKFYRLGEFLRDVGLRRKNVGNLLWNLLLLSYAANFKM 284

Query: 242 KSLQREFLRMVEAGFHPDLTTFNIRALAFSRMDLLWDLHLSLEHMEHVKIEPDLVTYGCV 301
           KSLQREFL MVEAGF+PD+TTFNIRA+AFSRMDLLWDLHLSLEHM+HVKIEPDLVTYGCV
Sbjct: 285 KSLQREFLAMVEAGFNPDITTFNIRAMAFSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCV 344

Query: 302 VDAYVDRRLGRNLDFALSKMNPDQPPVSLTESFVFEALGKGDFHMSSEAFMQFQRQKKWT 361
           VDAYVDRRLGRNL+F LSKMNPDQPP+SLT+ FVFEALGKGDFHMSSEAFMQFQ+QKKWT
Sbjct: 345 VDAYVDRRLGRNLEFVLSKMNPDQPPISLTDPFVFEALGKGDFHMSSEAFMQFQKQKKWT 404

Query: 362 YRELISLYLKRQYRRDQVFWNY 384
           YRELISLYLK+Q+RRDQVFWNY
Sbjct: 405 YRELISLYLKKQHRRDQVFWNY 426

BLAST of MS007091 vs. NCBI nr
Match: KAG6586124.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 658.7 bits (1698), Expect = 3.1e-185
Identity = 327/382 (85.60%), Postives = 355/382 (92.93%), Query Frame = 0

Query: 2   QDKGEGSFVDDDFYADHSQMIKKLSERRLPVLAQEIFWELKSEGSPLKNSTLSTLMESYI 61
           Q+K  GSF  DD   +HSQ+I+KLS+RR PVLAQEIF ELKSE  PL NSTLS+LM  YI
Sbjct: 45  QNKENGSFAGDDSSINHSQVIEKLSQRRTPVLAQEIFLELKSEDFPLNNSTLSSLMVRYI 104

Query: 62  DGGRLLQAQAIWQEMLNSSFVPSVNLISKLFHTFGKMGRFDDIIKVLDQVKLRYSHLLPE 121
           DGG LLQA+AIW+EMLNS FVPSV +ISKL +T+GKM RFDDIIKVLDQVKLRY HLLPE
Sbjct: 105 DGGLLLQAEAIWEEMLNSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKLRYLHLLPE 164

Query: 122 AFSLAISCFGKHGQLELMENTLREMVSSGFPVNSATGNSFIIHYSIFGSLMEMETAYGRL 181
           A+SLAISCFGKHGQLELMENTLREMVSSG PV+S TGNSFI +YSIFGSLMEMETAYGRL
Sbjct: 165 AYSLAISCFGKHGQLELMENTLREMVSSGVPVDSCTGNSFIAYYSIFGSLMEMETAYGRL 224

Query: 182 KRSRFLIEKEGIMAMAFAYLRKRKFYRLGEFLRDVGLGRRNVGNLLWNLLLLSYAANFKM 241
           KRSRFLIEKEGI+AMAFAY+R+RKFYRLGEFLRDVGL R+NVGNLLWNLLLLSYAANFKM
Sbjct: 225 KRSRFLIEKEGILAMAFAYIRERKFYRLGEFLRDVGLRRKNVGNLLWNLLLLSYAANFKM 284

Query: 242 KSLQREFLRMVEAGFHPDLTTFNIRALAFSRMDLLWDLHLSLEHMEHVKIEPDLVTYGCV 301
           KSLQREFL MVEAGF+PD+TTFNIRA+AFSRMDLLWDLHLSLEHM+HVKIEPDLVTYGCV
Sbjct: 285 KSLQREFLAMVEAGFNPDITTFNIRAMAFSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCV 344

Query: 302 VDAYVDRRLGRNLDFALSKMNPDQPPVSLTESFVFEALGKGDFHMSSEAFMQFQRQKKWT 361
           VDAYVDRRLGRNL+F LSKMNPDQPP+SLT+ FVFEALGKGDFHMSSEAFMQFQ+QKKWT
Sbjct: 345 VDAYVDRRLGRNLEFVLSKMNPDQPPISLTDPFVFEALGKGDFHMSSEAFMQFQKQKKWT 404

Query: 362 YRELISLYLKRQYRRDQVFWNY 384
           YRELISLYLK+Q+RRDQVFWNY
Sbjct: 405 YRELISLYLKKQHRRDQVFWNY 426

BLAST of MS007091 vs. NCBI nr
Match: XP_022937749.1 (pentatricopeptide repeat-containing protein At3g42630 [Cucurbita moschata])

HSP 1 Score: 657.9 bits (1696), Expect = 5.3e-185
Identity = 326/382 (85.34%), Postives = 356/382 (93.19%), Query Frame = 0

Query: 2   QDKGEGSFVDDDFYADHSQMIKKLSERRLPVLAQEIFWELKSEGSPLKNSTLSTLMESYI 61
           Q+K +GSF  DD   +HSQ+I+KLS+RR PVLAQEIF ELKSE  PL NSTLS+LM  YI
Sbjct: 45  QNKEKGSFAGDDSSINHSQVIEKLSQRRTPVLAQEIFLELKSEDFPLNNSTLSSLMVRYI 104

Query: 62  DGGRLLQAQAIWQEMLNSSFVPSVNLISKLFHTFGKMGRFDDIIKVLDQVKLRYSHLLPE 121
           DGG LLQA+AIW+EMLNS FVPSV +ISKL +T+GKM RFDDIIKVLDQVKLRY HLLPE
Sbjct: 105 DGGLLLQAEAIWEEMLNSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKLRYLHLLPE 164

Query: 122 AFSLAISCFGKHGQLELMENTLREMVSSGFPVNSATGNSFIIHYSIFGSLMEMETAYGRL 181
           A+SLAISCFGKHGQLELMENTLREMVSSG PV+S TGNSFI +YSIFGSLMEMETAYGRL
Sbjct: 165 AYSLAISCFGKHGQLELMENTLREMVSSGVPVDSRTGNSFIAYYSIFGSLMEMETAYGRL 224

Query: 182 KRSRFLIEKEGIMAMAFAYLRKRKFYRLGEFLRDVGLGRRNVGNLLWNLLLLSYAANFKM 241
           KRSRFLIEKEGI+AMAFAY+R+RKFYRLGEFLRDVGL R+NVGN+LWNLLLLSYAANFKM
Sbjct: 225 KRSRFLIEKEGILAMAFAYIRERKFYRLGEFLRDVGLRRKNVGNMLWNLLLLSYAANFKM 284

Query: 242 KSLQREFLRMVEAGFHPDLTTFNIRALAFSRMDLLWDLHLSLEHMEHVKIEPDLVTYGCV 301
           KSLQREFL MVEAGF+PD+TTFNIRA+AFSRMDLLWDLHLSLEHM+HVKIEPDLVTYGCV
Sbjct: 285 KSLQREFLAMVEAGFNPDITTFNIRAMAFSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCV 344

Query: 302 VDAYVDRRLGRNLDFALSKMNPDQPPVSLTESFVFEALGKGDFHMSSEAFMQFQRQKKWT 361
           VDAYVDRRLGRNL+F LSKMNPDQPP+SLT+ FVFEALGKGDFHMSSEAFMQFQ+QKKWT
Sbjct: 345 VDAYVDRRLGRNLEFVLSKMNPDQPPISLTDPFVFEALGKGDFHMSSEAFMQFQKQKKWT 404

Query: 362 YRELISLYLKRQYRRDQVFWNY 384
           YRELISLYLK+Q+RRDQVFWNY
Sbjct: 405 YRELISLYLKKQHRRDQVFWNY 426

BLAST of MS007091 vs. ExPASy Swiss-Prot
Match: Q9M2A1 (Pentatricopeptide repeat-containing protein At3g42630 OS=Arabidopsis thaliana OX=3702 GN=At3g42630 PE=2 SV=2)

HSP 1 Score: 433.0 bits (1112), Expect = 3.6e-120
Identity = 211/367 (57.49%), Postives = 274/367 (74.66%), Query Frame = 0

Query: 17  DHSQMIKKLSERRLPVLAQEIFWELKSEGSPLKNSTLSTLMESYIDGGRLLQAQAIWQEM 76
           D++ +++ LS+RRLP +A EIF + KS        TL  LM  + + G +L+A+ IW E+
Sbjct: 49  DYAPLVQTLSQRRLPDVAHEIFLQTKSVNLLPNYRTLCALMLCFAENGFVLRARTIWDEI 108

Query: 77  LNSSFVPSVNLISKLFHTFGKMGRFDDIIKVLDQVKLRYSHLLPEAFSLAISCFGKHGQL 136
           +NS FVP V ++SKL   + + G FD++ K+   V  R+S LLP   SLAISCFGK+GQL
Sbjct: 109 INSCFVPDVFVVSKLISAYEQFGCFDEVAKITKDVAARHSKLLPVVSSLAISCFGKNGQL 168

Query: 137 ELMENTLREMVSSGFPVNSATGNSFIIHYSIFGSLMEMETAYGRLKRSRFLIEKEGIMAM 196
           ELME  + EM S G  + + T N  + +YS FGSL +ME AYGR+K+   +IE+E I A+
Sbjct: 169 ELMEGVIEEMDSKGVLLEAETANVIVRYYSFFGSLDKMEKAYGRVKKFGIVIEEEEIRAV 228

Query: 197 AFAYLRKRKFYRLGEFLRDVGLGRRNVGNLLWNLLLLSYAANFKMKSLQREFLRMVEAGF 256
             AYL++RKFYRL EFL DVGLGRRN+GN+LWN +LLSYAA+FKMKSLQREF+ M++AGF
Sbjct: 229 VLAYLKQRKFYRLREFLSDVGLGRRNLGNMLWNSVLLSYAADFKMKSLQREFIGMLDAGF 288

Query: 257 HPDLTTFNIRALAFSRMDLLWDLHLSLEHMEHVKIEPDLVTYGCVVDAYVDRRLGRNLDF 316
            PDLTTFNIRALAFSRM L WDLHL+LEHM  + I PDLVT+GCVVDAY+D+RL RNL+F
Sbjct: 289 SPDLTTFNIRALAFSRMALFWDLHLTLEHMRRLNIVPDLVTFGCVVDAYMDKRLARNLEF 348

Query: 317 ALSKMNPDQPPVSLTESFVFEALGKGDFHMSSEAFMQFQRQKKWTYRELISLYLKRQYRR 376
             ++MN D  P+ LT+   FE LGKGDFH+SSEA ++F  +K WTYR+LI +YLK++ RR
Sbjct: 349 VYNRMNLDDSPLVLTDPLAFEVLGKGDFHLSSEAVLEFSPRKNWTYRKLIGVYLKKKLRR 408

Query: 377 DQVFWNY 384
           DQ+FWNY
Sbjct: 409 DQIFWNY 415

BLAST of MS007091 vs. ExPASy Swiss-Prot
Match: O64624 (Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g18940 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.0e-13
Identity = 73/293 (24.91%), Postives = 122/293 (41.64%), Query Frame = 0

Query: 52  TLSTLMESYIDGGRLLQAQAIWQEMLNSSFVPSVNLISKLFHTFGKMGRFDDIIKVLDQV 111
           T +T++++Y   G+  +A  ++  M  +  VP+    + +    GK  R +++IK+L  +
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM 447

Query: 112 KLRYSHLLPEAFSLAISCFGKHGQLELMENTLREMVSSGFPVNSATGNSFIIHYSIFGSL 171
           K          ++  ++  G  G  + +    REM S GF  +  T N+ I  Y   GS 
Sbjct: 448 KSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSE 507

Query: 172 MEMETAYGRLKRSRFLIEKEGIMAMAFAYLRKRKFYRLGE----FLRDVG---------- 231
           ++    YG + R+ F        A+  A  RK   +R GE     ++  G          
Sbjct: 508 VDASKMYGEMTRAGFNACVTTYNALLNALARKGD-WRSGENVISDMKSKGFKPTETSYSL 567

Query: 232 -----------LGRRNVGNLL--------WNLLLLSYAANFKMKSL---QREFLRMVEAG 291
                      LG   + N +        W LL     ANFK ++L   +R F    + G
Sbjct: 568 MLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHG 627

Query: 292 FHPDLTTFNIRALAFSRMDLLWDLHLSLEHMEHVKIEPDLVTYGCVVDAYVDR 309
           + PD+  FN     F+R ++       LE +    + PDLVTY  ++D YV R
Sbjct: 628 YKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRR 679

BLAST of MS007091 vs. ExPASy Swiss-Prot
Match: Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 5.6e-12
Identity = 60/277 (21.66%), Postives = 124/277 (44.77%), Query Frame = 0

Query: 34  AQEIFWELKSEGSPLKNSTLSTLMESYIDGGRLLQAQAIWQEMLNSSFVPSVNLISKLFH 93
           A ++F E+K+ G      T + L++ Y    R  +A  +  EM+ + F PS+   + L  
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357

Query: 94  TFGKMGRFDDIIKVLDQVKLRYSHLLPEAFSLAISCFGKHGQLELMENTLREMVSSGFPV 153
            + + G  D+ +++ +Q+  + +      ++  +S F + G++E   +   EM ++G   
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP 417

Query: 154 NSATGNSFIIHYSIFGSLMEMETAYGRLK---RSRFLIEKEGIMAMAFAYLRKRKFYRLG 213
           N  T N+FI  Y   G   EM   +  +     S  ++    ++A+        +   + 
Sbjct: 418 NICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477

Query: 214 EFLRDVGLGRRNVGNLLWNLLLLSYAANFKMKSLQREFLRMVEAGFHPDLTTFNIRALAF 273
           + ++  G          +N L+ +Y+     +     + RM++AG  PDL+T+N    A 
Sbjct: 478 KEMKRAGFVPERE---TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAAL 537

Query: 274 SRMDLLWDLHLSLEHMEHVKIEPDLVTYGCVVDAYVD 308
           +R  +       L  ME  + +P+ +TY  ++ AY +
Sbjct: 538 ARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYAN 571

BLAST of MS007091 vs. ExPASy Swiss-Prot
Match: Q9LYT2 (Pentatricopeptide repeat-containing protein At3g59040 OS=Arabidopsis thaliana OX=3702 GN=At3g59040 PE=2 SV=2)

HSP 1 Score: 69.3 bits (168), Expect = 1.1e-10
Identity = 69/279 (24.73%), Postives = 124/279 (44.44%), Query Frame = 0

Query: 34  AQEIFWELKSEGSPLKNSTLSTLMESYIDGGRLLQAQAIWQEMLNSSFVPSVNLISKLFH 93
           A+ +   L   GS     + + LMESY  GG+   A+AI++ M +S   PS      +  
Sbjct: 158 AERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILK 217

Query: 94  TFGKMGRFDDIIKVLDQ-VKLRYSHLLPE--AFSLAISCFGKHGQLELMENTLREMVSSG 153
           TF +  +F +  +V +  +  + S L P+   + + I  + K G  E        MV  G
Sbjct: 218 TFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKG 277

Query: 154 FPVNSATGNSFIIHYSIFGSLMEMETAYGRLKRSRFLIEKEGIMAMAFAYLR-KRKFYRL 213
            P ++ T NS +   S   S  E+   Y +++RS    +      +  AY R +R+   L
Sbjct: 278 VPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEAL 337

Query: 214 GEFLRDVGLGRRNVGNLLWNLLLLSYAANFKMKSLQREFLRMVEAGFHPDLTTFNIRALA 273
             F   +  G R   +  +N+LL ++A +  ++  +  F  M      PDL ++     A
Sbjct: 338 SVFEEMLDAGVRPT-HKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSA 397

Query: 274 FSRMDLLWDLHLSLEHMEHVKI---EPDLVTYGCVVDAY 306
           +       D+  + +  + +K+   EP++VTYG ++  Y
Sbjct: 398 YVNAS---DMEGAEKFFKRIKVDGFEPNIVTYGTLIKGY 429

BLAST of MS007091 vs. ExPASy Swiss-Prot
Match: Q9CAN5 (Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g63080 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.4e-10
Identity = 81/366 (22.13%), Postives = 143/366 (39.07%), Query Frame = 0

Query: 18  HSQMIKKLSERRLPVLAQEIFWELKSEGSPLKNSTLSTLMESYIDGGRLLQAQAIWQEML 77
           +  +I  L +R  P LA  +  +++           ST+++S      +  A  ++ EM 
Sbjct: 208 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD 267

Query: 78  NSSFVPSVNLISKLFHTFGKMGRFDDIIKVLDQVKLRYSHLLPEAFSLAISCFGKHGQLE 137
           N    P V   S L       GR+ D  ++L  +  R  +     F+  I  F K G+L 
Sbjct: 268 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLI 327

Query: 138 LMENTLREMVSSGFPVNSATGNSFIIHYSIFGSLMEMETAYGRLKRSRFLIEKEGIMAMA 197
             E    EM+      N  T NS I  + +   L E +  +  +     L +      + 
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387

Query: 198 FAYLRKRKFYRLGEFLRDVGLGRRNVGN-LLWNLLLLSYAANFKMKSLQREFLRMVEAGF 257
             + + +K     E  RD+   R  VGN + +  L+  +       + Q  F +MV  G 
Sbjct: 388 NGFCKAKKVVDGMELFRDMS-RRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV 447

Query: 258 HPDLTTFNIRALAFSRMDLLWDLHLSLEHMEHVKIEPDLVTYGCVVDAYVDRRLGRNLD- 317
           HP++ T+N       +   L    +  E+++  K+EPD+ TY  + +     + G+  D 
Sbjct: 448 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC--KAGKVEDG 507

Query: 318 ---FALSKMNPDQPPVSLTESFVFEALGKGDFHMSSEAFMQFQRQKK-------WTYREL 372
              F    +   +P V    + +     KG   +  EA+  F + K+        TY  L
Sbjct: 508 WDLFCSLSLKGVKPDVIAYNTMISGFCKKG---LKEEAYTLFIKMKEDGPLPDSGTYNTL 567

BLAST of MS007091 vs. ExPASy TrEMBL
Match: A0A6J1D726 (pentatricopeptide repeat-containing protein At3g42630 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018218 PE=4 SV=1)

HSP 1 Score: 760.0 bits (1961), Expect = 4.8e-216
Identity = 379/382 (99.21%), Postives = 381/382 (99.74%), Query Frame = 0

Query: 2   QDKGEGSFVDDDFYADHSQMIKKLSERRLPVLAQEIFWELKSEGSPLKNSTLSTLMESYI 61
           +DKGEGSFVDDDFYADHSQMIKKLSERRLPVLAQEIFWELKSEGSPLKNSTLSTLMESYI
Sbjct: 41  KDKGEGSFVDDDFYADHSQMIKKLSERRLPVLAQEIFWELKSEGSPLKNSTLSTLMESYI 100

Query: 62  DGGRLLQAQAIWQEMLNSSFVPSVNLISKLFHTFGKMGRFDDIIKVLDQVKLRYSHLLPE 121
           DGGRLLQAQAIW+EMLNSSFVPSVNLISKLFHTFGKMGRFDDIIKVLDQVKLRYSHLLPE
Sbjct: 101 DGGRLLQAQAIWEEMLNSSFVPSVNLISKLFHTFGKMGRFDDIIKVLDQVKLRYSHLLPE 160

Query: 122 AFSLAISCFGKHGQLELMENTLREMVSSGFPVNSATGNSFIIHYSIFGSLMEMETAYGRL 181
           AFSLAISCFGKHGQLELMENTLREMVSSGFPVNSATGNSFIIHYSIFGSLMEMETAYGRL
Sbjct: 161 AFSLAISCFGKHGQLELMENTLREMVSSGFPVNSATGNSFIIHYSIFGSLMEMETAYGRL 220

Query: 182 KRSRFLIEKEGIMAMAFAYLRKRKFYRLGEFLRDVGLGRRNVGNLLWNLLLLSYAANFKM 241
           KRSRFLIEKEGIMAMAFAYLRKRKFYRLGEFLRDVGLGRRNVGNLLWNLLLLSYAANFKM
Sbjct: 221 KRSRFLIEKEGIMAMAFAYLRKRKFYRLGEFLRDVGLGRRNVGNLLWNLLLLSYAANFKM 280

Query: 242 KSLQREFLRMVEAGFHPDLTTFNIRALAFSRMDLLWDLHLSLEHMEHVKIEPDLVTYGCV 301
           KSLQREFLRMVEAGFHPDLTTFNIRALAFSRMDLLWDLHLSLEHMEHVKIEPDLVTYGCV
Sbjct: 281 KSLQREFLRMVEAGFHPDLTTFNIRALAFSRMDLLWDLHLSLEHMEHVKIEPDLVTYGCV 340

Query: 302 VDAYVDRRLGRNLDFALSKMNPDQPPVSLTESFVFEALGKGDFHMSSEAFMQFQRQKKWT 361
           VDAYVDRRLGRNLDFALSKMNPDQ PVSLTESFVFEALGKGDFHMSSEAFMQFQRQKKWT
Sbjct: 341 VDAYVDRRLGRNLDFALSKMNPDQTPVSLTESFVFEALGKGDFHMSSEAFMQFQRQKKWT 400

Query: 362 YRELISLYLKRQYRRDQVFWNY 384
           YRELISLYLKRQYRRDQVFWNY
Sbjct: 401 YRELISLYLKRQYRRDQVFWNY 422

BLAST of MS007091 vs. ExPASy TrEMBL
Match: A0A6J1D9V6 (pentatricopeptide repeat-containing protein At3g42630 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018218 PE=4 SV=1)

HSP 1 Score: 721.8 bits (1862), Expect = 1.5e-204
Identity = 361/363 (99.45%), Postives = 362/363 (99.72%), Query Frame = 0

Query: 21  MIKKLSERRLPVLAQEIFWELKSEGSPLKNSTLSTLMESYIDGGRLLQAQAIWQEMLNSS 80
           MIKKLSERRLPVLAQEIFWELKSEGSPLKNSTLSTLMESYIDGGRLLQAQAIW+EMLNSS
Sbjct: 1   MIKKLSERRLPVLAQEIFWELKSEGSPLKNSTLSTLMESYIDGGRLLQAQAIWEEMLNSS 60

Query: 81  FVPSVNLISKLFHTFGKMGRFDDIIKVLDQVKLRYSHLLPEAFSLAISCFGKHGQLELME 140
           FVPSVNLISKLFHTFGKMGRFDDIIKVLDQVKLRYSHLLPEAFSLAISCFGKHGQLELME
Sbjct: 61  FVPSVNLISKLFHTFGKMGRFDDIIKVLDQVKLRYSHLLPEAFSLAISCFGKHGQLELME 120

Query: 141 NTLREMVSSGFPVNSATGNSFIIHYSIFGSLMEMETAYGRLKRSRFLIEKEGIMAMAFAY 200
           NTLREMVSSGFPVNSATGNSFIIHYSIFGSLMEMETAYGRLKRSRFLIEKEGIMAMAFAY
Sbjct: 121 NTLREMVSSGFPVNSATGNSFIIHYSIFGSLMEMETAYGRLKRSRFLIEKEGIMAMAFAY 180

Query: 201 LRKRKFYRLGEFLRDVGLGRRNVGNLLWNLLLLSYAANFKMKSLQREFLRMVEAGFHPDL 260
           LRKRKFYRLGEFLRDVGLGRRNVGNLLWNLLLLSYAANFKMKSLQREFLRMVEAGFHPDL
Sbjct: 181 LRKRKFYRLGEFLRDVGLGRRNVGNLLWNLLLLSYAANFKMKSLQREFLRMVEAGFHPDL 240

Query: 261 TTFNIRALAFSRMDLLWDLHLSLEHMEHVKIEPDLVTYGCVVDAYVDRRLGRNLDFALSK 320
           TTFNIRALAFSRMDLLWDLHLSLEHMEHVKIEPDLVTYGCVVDAYVDRRLGRNLDFALSK
Sbjct: 241 TTFNIRALAFSRMDLLWDLHLSLEHMEHVKIEPDLVTYGCVVDAYVDRRLGRNLDFALSK 300

Query: 321 MNPDQPPVSLTESFVFEALGKGDFHMSSEAFMQFQRQKKWTYRELISLYLKRQYRRDQVF 380
           MNPDQ PVSLTESFVFEALGKGDFHMSSEAFMQFQRQKKWTYRELISLYLKRQYRRDQVF
Sbjct: 301 MNPDQTPVSLTESFVFEALGKGDFHMSSEAFMQFQRQKKWTYRELISLYLKRQYRRDQVF 360

Query: 381 WNY 384
           WNY
Sbjct: 361 WNY 363

BLAST of MS007091 vs. ExPASy TrEMBL
Match: A0A6J1FC40 (pentatricopeptide repeat-containing protein At3g42630 OS=Cucurbita moschata OX=3662 GN=LOC111444056 PE=4 SV=1)

HSP 1 Score: 657.9 bits (1696), Expect = 2.6e-185
Identity = 326/382 (85.34%), Postives = 356/382 (93.19%), Query Frame = 0

Query: 2   QDKGEGSFVDDDFYADHSQMIKKLSERRLPVLAQEIFWELKSEGSPLKNSTLSTLMESYI 61
           Q+K +GSF  DD   +HSQ+I+KLS+RR PVLAQEIF ELKSE  PL NSTLS+LM  YI
Sbjct: 45  QNKEKGSFAGDDSSINHSQVIEKLSQRRTPVLAQEIFLELKSEDFPLNNSTLSSLMVRYI 104

Query: 62  DGGRLLQAQAIWQEMLNSSFVPSVNLISKLFHTFGKMGRFDDIIKVLDQVKLRYSHLLPE 121
           DGG LLQA+AIW+EMLNS FVPSV +ISKL +T+GKM RFDDIIKVLDQVKLRY HLLPE
Sbjct: 105 DGGLLLQAEAIWEEMLNSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKLRYLHLLPE 164

Query: 122 AFSLAISCFGKHGQLELMENTLREMVSSGFPVNSATGNSFIIHYSIFGSLMEMETAYGRL 181
           A+SLAISCFGKHGQLELMENTLREMVSSG PV+S TGNSFI +YSIFGSLMEMETAYGRL
Sbjct: 165 AYSLAISCFGKHGQLELMENTLREMVSSGVPVDSRTGNSFIAYYSIFGSLMEMETAYGRL 224

Query: 182 KRSRFLIEKEGIMAMAFAYLRKRKFYRLGEFLRDVGLGRRNVGNLLWNLLLLSYAANFKM 241
           KRSRFLIEKEGI+AMAFAY+R+RKFYRLGEFLRDVGL R+NVGN+LWNLLLLSYAANFKM
Sbjct: 225 KRSRFLIEKEGILAMAFAYIRERKFYRLGEFLRDVGLRRKNVGNMLWNLLLLSYAANFKM 284

Query: 242 KSLQREFLRMVEAGFHPDLTTFNIRALAFSRMDLLWDLHLSLEHMEHVKIEPDLVTYGCV 301
           KSLQREFL MVEAGF+PD+TTFNIRA+AFSRMDLLWDLHLSLEHM+HVKIEPDLVTYGCV
Sbjct: 285 KSLQREFLAMVEAGFNPDITTFNIRAMAFSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCV 344

Query: 302 VDAYVDRRLGRNLDFALSKMNPDQPPVSLTESFVFEALGKGDFHMSSEAFMQFQRQKKWT 361
           VDAYVDRRLGRNL+F LSKMNPDQPP+SLT+ FVFEALGKGDFHMSSEAFMQFQ+QKKWT
Sbjct: 345 VDAYVDRRLGRNLEFVLSKMNPDQPPISLTDPFVFEALGKGDFHMSSEAFMQFQKQKKWT 404

Query: 362 YRELISLYLKRQYRRDQVFWNY 384
           YRELISLYLK+Q+RRDQVFWNY
Sbjct: 405 YRELISLYLKKQHRRDQVFWNY 426

BLAST of MS007091 vs. ExPASy TrEMBL
Match: A0A6J1HSM5 (pentatricopeptide repeat-containing protein At3g42630 OS=Cucurbita maxima OX=3661 GN=LOC111465788 PE=4 SV=1)

HSP 1 Score: 655.6 bits (1690), Expect = 1.3e-184
Identity = 325/382 (85.08%), Postives = 355/382 (92.93%), Query Frame = 0

Query: 2   QDKGEGSFVDDDFYADHSQMIKKLSERRLPVLAQEIFWELKSEGSPLKNSTLSTLMESYI 61
           Q+K +GSF DDD   +HSQ+I+KLS+RR PVLAQEIF ELKSE  PL NSTLS+LM  YI
Sbjct: 45  QNKEKGSFADDDSSINHSQVIEKLSQRRTPVLAQEIFLELKSEDFPLNNSTLSSLMVRYI 104

Query: 62  DGGRLLQAQAIWQEMLNSSFVPSVNLISKLFHTFGKMGRFDDIIKVLDQVKLRYSHLLPE 121
           DGG LLQA+AIW+EMLNS FVPSV +ISKL +T+GKM RFDDIIKVLDQVKLRY HLLPE
Sbjct: 105 DGGLLLQAEAIWEEMLNSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKLRYLHLLPE 164

Query: 122 AFSLAISCFGKHGQLELMENTLREMVSSGFPVNSATGNSFIIHYSIFGSLMEMETAYGRL 181
           A+SLAISCFGKHGQLELMENTLREMVSSG PV S TGNSFI++YSIFGSLMEMETAYGRL
Sbjct: 165 AYSLAISCFGKHGQLELMENTLREMVSSGVPVGSRTGNSFIVYYSIFGSLMEMETAYGRL 224

Query: 182 KRSRFLIEKEGIMAMAFAYLRKRKFYRLGEFLRDVGLGRRNVGNLLWNLLLLSYAANFKM 241
           KRSRFLIEKEGI+AMAFAY+R+RKFYRLGEFLRDVGL R+NVGNLLWNLLLLSYAANFKM
Sbjct: 225 KRSRFLIEKEGILAMAFAYIRERKFYRLGEFLRDVGLRRKNVGNLLWNLLLLSYAANFKM 284

Query: 242 KSLQREFLRMVEAGFHPDLTTFNIRALAFSRMDLLWDLHLSLEHMEHVKIEPDLVTYGCV 301
           KSLQREFL MVEAGF+PD+TTFNIRA+AFSRMDLLWDLHLSLEHM+HVKIEPDLVTYGCV
Sbjct: 285 KSLQREFLAMVEAGFNPDITTFNIRAMAFSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCV 344

Query: 302 VDAYVDRRLGRNLDFALSKMNPDQPPVSLTESFVFEALGKGDFHMSSEAFMQFQRQKKWT 361
           VDAYV+RRLGRNL+F LSKMNPDQPP+  T+ FVFEALGKGDFHMSSEAFMQFQ+QKKWT
Sbjct: 345 VDAYVNRRLGRNLEFVLSKMNPDQPPILSTDLFVFEALGKGDFHMSSEAFMQFQKQKKWT 404

Query: 362 YRELISLYLKRQYRRDQVFWNY 384
           YRELISLYLK+Q+RRDQVFWNY
Sbjct: 405 YRELISLYLKKQHRRDQVFWNY 426

BLAST of MS007091 vs. ExPASy TrEMBL
Match: A0A1S3BP30 (pentatricopeptide repeat-containing protein At3g42630-like OS=Cucumis melo OX=3656 GN=LOC103492176 PE=4 SV=1)

HSP 1 Score: 645.2 bits (1663), Expect = 1.7e-181
Identity = 322/383 (84.07%), Postives = 353/383 (92.17%), Query Frame = 0

Query: 1   WQDKGEGSFVDDDFYADHSQMIKKLSERRLPVLAQEIFWELKSEGSPLKNSTLSTLMESY 60
           +Q   EGS VD  F  ++SQ+IKKLS RR+P LA+EIF ELKSEG PL NSTLST+M  Y
Sbjct: 43  FQQHNEGSSVDYGFNINNSQVIKKLSRRRMPTLAKEIFLELKSEGFPLNNSTLSTIMVHY 102

Query: 61  IDGGRLLQAQAIWQEMLNSSFVPSVNLISKLFHTFGKMGRFDDIIKVLDQVKLRYSHLLP 120
           ID G  LQAQA+W+EMLNS F PSV +ISKLF+ +GKMG FD I KVLDQVKLRYSHLLP
Sbjct: 103 IDDGSPLQAQAMWEEMLNSCFEPSVQVISKLFNAYGKMGHFDYITKVLDQVKLRYSHLLP 162

Query: 121 EAFSLAISCFGKHGQLELMENTLREMVSSGFPVNSATGNSFIIHYSIFGSLMEMETAYGR 180
           EA+SLAISCFGKH QLELME+TLREMVSSGF VNSATGNSFII+YS+FGSL+EMETAYGR
Sbjct: 163 EAYSLAISCFGKHKQLELMESTLREMVSSGFTVNSATGNSFIIYYSMFGSLLEMETAYGR 222

Query: 181 LKRSRFLIEKEGIMAMAFAYLRKRKFYRLGEFLRDVGLGRRNVGNLLWNLLLLSYAANFK 240
           LKRSRFLIEK+GIMAMAFAY+RKRKFYRLGEFLRDVGLGR+NVGNLLWNLLLLSYAANFK
Sbjct: 223 LKRSRFLIEKKGIMAMAFAYIRKRKFYRLGEFLRDVGLGRKNVGNLLWNLLLLSYAANFK 282

Query: 241 MKSLQREFLRMVEAGFHPDLTTFNIRALAFSRMDLLWDLHLSLEHMEHVKIEPDLVTYGC 300
           MKSLQREFL+MVEAGF+PDLTTFNIRALAFSRMDLLWDLHLSLEHM+H+ IEPDLVTYGC
Sbjct: 283 MKSLQREFLQMVEAGFNPDLTTFNIRALAFSRMDLLWDLHLSLEHMKHMNIEPDLVTYGC 342

Query: 301 VVDAYVDRRLGRNLDFALSKMNPDQPPVSLTESFVFEALGKGDFHMSSEAFMQFQRQKKW 360
           VVDAYVDRRLGRNL+F LSKMNP QPPVSLT+SFVFEALGKGDFHMSSEAFMQF++QKKW
Sbjct: 343 VVDAYVDRRLGRNLEFILSKMNPVQPPVSLTDSFVFEALGKGDFHMSSEAFMQFRKQKKW 402

Query: 361 TYRELISLYLKRQYRRDQVFWNY 384
           TYRELISLYLK+Q+RR+QVFWNY
Sbjct: 403 TYRELISLYLKKQHRRNQVFWNY 425

BLAST of MS007091 vs. TAIR 10
Match: AT3G42630.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 433.0 bits (1112), Expect = 2.6e-121
Identity = 211/367 (57.49%), Postives = 274/367 (74.66%), Query Frame = 0

Query: 17  DHSQMIKKLSERRLPVLAQEIFWELKSEGSPLKNSTLSTLMESYIDGGRLLQAQAIWQEM 76
           D++ +++ LS+RRLP +A EIF + KS        TL  LM  + + G +L+A+ IW E+
Sbjct: 49  DYAPLVQTLSQRRLPDVAHEIFLQTKSVNLLPNYRTLCALMLCFAENGFVLRARTIWDEI 108

Query: 77  LNSSFVPSVNLISKLFHTFGKMGRFDDIIKVLDQVKLRYSHLLPEAFSLAISCFGKHGQL 136
           +NS FVP V ++SKL   + + G FD++ K+   V  R+S LLP   SLAISCFGK+GQL
Sbjct: 109 INSCFVPDVFVVSKLISAYEQFGCFDEVAKITKDVAARHSKLLPVVSSLAISCFGKNGQL 168

Query: 137 ELMENTLREMVSSGFPVNSATGNSFIIHYSIFGSLMEMETAYGRLKRSRFLIEKEGIMAM 196
           ELME  + EM S G  + + T N  + +YS FGSL +ME AYGR+K+   +IE+E I A+
Sbjct: 169 ELMEGVIEEMDSKGVLLEAETANVIVRYYSFFGSLDKMEKAYGRVKKFGIVIEEEEIRAV 228

Query: 197 AFAYLRKRKFYRLGEFLRDVGLGRRNVGNLLWNLLLLSYAANFKMKSLQREFLRMVEAGF 256
             AYL++RKFYRL EFL DVGLGRRN+GN+LWN +LLSYAA+FKMKSLQREF+ M++AGF
Sbjct: 229 VLAYLKQRKFYRLREFLSDVGLGRRNLGNMLWNSVLLSYAADFKMKSLQREFIGMLDAGF 288

Query: 257 HPDLTTFNIRALAFSRMDLLWDLHLSLEHMEHVKIEPDLVTYGCVVDAYVDRRLGRNLDF 316
            PDLTTFNIRALAFSRM L WDLHL+LEHM  + I PDLVT+GCVVDAY+D+RL RNL+F
Sbjct: 289 SPDLTTFNIRALAFSRMALFWDLHLTLEHMRRLNIVPDLVTFGCVVDAYMDKRLARNLEF 348

Query: 317 ALSKMNPDQPPVSLTESFVFEALGKGDFHMSSEAFMQFQRQKKWTYRELISLYLKRQYRR 376
             ++MN D  P+ LT+   FE LGKGDFH+SSEA ++F  +K WTYR+LI +YLK++ RR
Sbjct: 349 VYNRMNLDDSPLVLTDPLAFEVLGKGDFHLSSEAVLEFSPRKNWTYRKLIGVYLKKKLRR 408

Query: 377 DQVFWNY 384
           DQ+FWNY
Sbjct: 409 DQIFWNY 415

BLAST of MS007091 vs. TAIR 10
Match: AT2G18940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 79.3 bits (194), Expect = 7.3e-15
Identity = 73/293 (24.91%), Postives = 122/293 (41.64%), Query Frame = 0

Query: 52  TLSTLMESYIDGGRLLQAQAIWQEMLNSSFVPSVNLISKLFHTFGKMGRFDDIIKVLDQV 111
           T +T++++Y   G+  +A  ++  M  +  VP+    + +    GK  R +++IK+L  +
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM 447

Query: 112 KLRYSHLLPEAFSLAISCFGKHGQLELMENTLREMVSSGFPVNSATGNSFIIHYSIFGSL 171
           K          ++  ++  G  G  + +    REM S GF  +  T N+ I  Y   GS 
Sbjct: 448 KSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSE 507

Query: 172 MEMETAYGRLKRSRFLIEKEGIMAMAFAYLRKRKFYRLGE----FLRDVG---------- 231
           ++    YG + R+ F        A+  A  RK   +R GE     ++  G          
Sbjct: 508 VDASKMYGEMTRAGFNACVTTYNALLNALARKGD-WRSGENVISDMKSKGFKPTETSYSL 567

Query: 232 -----------LGRRNVGNLL--------WNLLLLSYAANFKMKSL---QREFLRMVEAG 291
                      LG   + N +        W LL     ANFK ++L   +R F    + G
Sbjct: 568 MLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHG 627

Query: 292 FHPDLTTFNIRALAFSRMDLLWDLHLSLEHMEHVKIEPDLVTYGCVVDAYVDR 309
           + PD+  FN     F+R ++       LE +    + PDLVTY  ++D YV R
Sbjct: 628 YKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRR 679

BLAST of MS007091 vs. TAIR 10
Match: AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 73.6 bits (179), Expect = 4.0e-13
Identity = 60/277 (21.66%), Postives = 124/277 (44.77%), Query Frame = 0

Query: 34  AQEIFWELKSEGSPLKNSTLSTLMESYIDGGRLLQAQAIWQEMLNSSFVPSVNLISKLFH 93
           A ++F E+K+ G      T + L++ Y    R  +A  +  EM+ + F PS+   + L  
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357

Query: 94  TFGKMGRFDDIIKVLDQVKLRYSHLLPEAFSLAISCFGKHGQLELMENTLREMVSSGFPV 153
            + + G  D+ +++ +Q+  + +      ++  +S F + G++E   +   EM ++G   
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP 417

Query: 154 NSATGNSFIIHYSIFGSLMEMETAYGRLK---RSRFLIEKEGIMAMAFAYLRKRKFYRLG 213
           N  T N+FI  Y   G   EM   +  +     S  ++    ++A+        +   + 
Sbjct: 418 NICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477

Query: 214 EFLRDVGLGRRNVGNLLWNLLLLSYAANFKMKSLQREFLRMVEAGFHPDLTTFNIRALAF 273
           + ++  G          +N L+ +Y+     +     + RM++AG  PDL+T+N    A 
Sbjct: 478 KEMKRAGFVPERE---TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAAL 537

Query: 274 SRMDLLWDLHLSLEHMEHVKIEPDLVTYGCVVDAYVD 308
           +R  +       L  ME  + +P+ +TY  ++ AY +
Sbjct: 538 ARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYAN 571

BLAST of MS007091 vs. TAIR 10
Match: AT3G59040.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 69.3 bits (168), Expect = 7.5e-12
Identity = 69/279 (24.73%), Postives = 124/279 (44.44%), Query Frame = 0

Query: 34  AQEIFWELKSEGSPLKNSTLSTLMESYIDGGRLLQAQAIWQEMLNSSFVPSVNLISKLFH 93
           A+ +   L   GS     + + LMESY  GG+   A+AI++ M +S   PS      +  
Sbjct: 165 AERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILK 224

Query: 94  TFGKMGRFDDIIKVLDQ-VKLRYSHLLPE--AFSLAISCFGKHGQLELMENTLREMVSSG 153
           TF +  +F +  +V +  +  + S L P+   + + I  + K G  E        MV  G
Sbjct: 225 TFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKG 284

Query: 154 FPVNSATGNSFIIHYSIFGSLMEMETAYGRLKRSRFLIEKEGIMAMAFAYLR-KRKFYRL 213
            P ++ T NS +   S   S  E+   Y +++RS    +      +  AY R +R+   L
Sbjct: 285 VPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEAL 344

Query: 214 GEFLRDVGLGRRNVGNLLWNLLLLSYAANFKMKSLQREFLRMVEAGFHPDLTTFNIRALA 273
             F   +  G R   +  +N+LL ++A +  ++  +  F  M      PDL ++     A
Sbjct: 345 SVFEEMLDAGVRPT-HKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSA 404

Query: 274 FSRMDLLWDLHLSLEHMEHVKI---EPDLVTYGCVVDAY 306
           +       D+  + +  + +K+   EP++VTYG ++  Y
Sbjct: 405 YVNAS---DMEGAEKFFKRIKVDGFEPNIVTYGTLIKGY 436

BLAST of MS007091 vs. TAIR 10
Match: AT3G59040.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 69.3 bits (168), Expect = 7.5e-12
Identity = 69/279 (24.73%), Postives = 124/279 (44.44%), Query Frame = 0

Query: 34  AQEIFWELKSEGSPLKNSTLSTLMESYIDGGRLLQAQAIWQEMLNSSFVPSVNLISKLFH 93
           A+ +   L   GS     + + LMESY  GG+   A+AI++ M +S   PS      +  
Sbjct: 158 AERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILK 217

Query: 94  TFGKMGRFDDIIKVLDQ-VKLRYSHLLPE--AFSLAISCFGKHGQLELMENTLREMVSSG 153
           TF +  +F +  +V +  +  + S L P+   + + I  + K G  E        MV  G
Sbjct: 218 TFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKG 277

Query: 154 FPVNSATGNSFIIHYSIFGSLMEMETAYGRLKRSRFLIEKEGIMAMAFAYLR-KRKFYRL 213
            P ++ T NS +   S   S  E+   Y +++RS    +      +  AY R +R+   L
Sbjct: 278 VPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEAL 337

Query: 214 GEFLRDVGLGRRNVGNLLWNLLLLSYAANFKMKSLQREFLRMVEAGFHPDLTTFNIRALA 273
             F   +  G R   +  +N+LL ++A +  ++  +  F  M      PDL ++     A
Sbjct: 338 SVFEEMLDAGVRPT-HKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSA 397

Query: 274 FSRMDLLWDLHLSLEHMEHVKI---EPDLVTYGCVVDAY 306
           +       D+  + +  + +K+   EP++VTYG ++  Y
Sbjct: 398 YVNAS---DMEGAEKFFKRIKVDGFEPNIVTYGTLIKGY 429

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022149915.19.9e-21699.21pentatricopeptide repeat-containing protein At3g42630 isoform X1 [Momordica char... [more]
XP_022149916.13.0e-20499.45pentatricopeptide repeat-containing protein At3g42630 isoform X2 [Momordica char... [more]
KAG7020945.11.3e-18685.86Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
KAG6586124.13.1e-18585.60Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_022937749.15.3e-18585.34pentatricopeptide repeat-containing protein At3g42630 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Q9M2A13.6e-12057.49Pentatricopeptide repeat-containing protein At3g42630 OS=Arabidopsis thaliana OX... [more]
O646241.0e-1324.91Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidop... [more]
Q9LYZ95.6e-1221.66Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX... [more]
Q9LYT21.1e-1024.73Pentatricopeptide repeat-containing protein At3g59040 OS=Arabidopsis thaliana OX... [more]
Q9CAN51.4e-1022.13Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1D7264.8e-21699.21pentatricopeptide repeat-containing protein At3g42630 isoform X1 OS=Momordica ch... [more]
A0A6J1D9V61.5e-20499.45pentatricopeptide repeat-containing protein At3g42630 isoform X2 OS=Momordica ch... [more]
A0A6J1FC402.6e-18585.34pentatricopeptide repeat-containing protein At3g42630 OS=Cucurbita moschata OX=3... [more]
A0A6J1HSM51.3e-18485.08pentatricopeptide repeat-containing protein At3g42630 OS=Cucurbita maxima OX=366... [more]
A0A1S3BP301.7e-18184.07pentatricopeptide repeat-containing protein At3g42630-like OS=Cucumis melo OX=36... [more]
Match NameE-valueIdentityDescription
AT3G42630.12.6e-12157.49Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G18940.17.3e-1524.91Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G02860.14.0e-1321.66Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G59040.27.5e-1224.73Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G59040.17.5e-1224.73Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 123..154
e-value: 1.1E-4
score: 20.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 52..79
e-value: 0.96
score: 9.8
coord: 123..151
e-value: 0.0042
score: 17.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 49..83
score: 9.097937
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 221..362
e-value: 8.4E-10
score: 40.5
coord: 16..208
e-value: 4.4E-21
score: 77.6
NoneNo IPR availablePANTHERPTHR47493OS08G0520200 PROTEINcoord: 14..383
NoneNo IPR availablePANTHERPTHR47493:SF1OS08G0520200 PROTEINcoord: 14..383

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS007091.1MS007091.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding