MS007089 (gene) Bitter gourd (TR) v1

Overview
NameMS007089
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncodeine O-demethylase-like
Locationscaffold25: 45168 .. 45443 (-)
RNA-Seq ExpressionMS007089
SyntenyMS007089
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCGGAAATTGAAAATGGCCAGAAATGTTCTTGAAATGTCCATCAATGGCGAGGAGCCGCCGCGAGCGTACGTAGTGGAAGACTGTGCGTTCGGCGGCGCCGTCGACTGTGGCTCGTCGGCGGGCGAAATTCCGGTCATCGACGTCGGCGTGTTTCTGCCGTCTTCGGCGGCGCCGGAGGCAGAGGTTTTAGACTCCGAATTGAGGAAACTCAGATCTGCTCTCGCAAAACACGGATGCTTTCAGGTTTATAAATTTAATTCCCTTCCATATTTT

mRNA sequence

TTTCGGAAATTGAAAATGGCCAGAAATGTTCTTGAAATGTCCATCAATGGCGAGGAGCCGCCGCGAGCGTACGTAGTGGAAGACTGTGCGTTCGGCGGCGCCGTCGACTGTGGCTCGTCGGCGGGCGAAATTCCGGTCATCGACGTCGGCGTGTTTCTGCCGTCTTCGGCGGCGCCGGAGGCAGAGGTTTTAGACTCCGAATTGAGGAAACTCAGATCTGCTCTCGCAAAACACGGATGCTTTCAGGTTTATAAATTTAATTCCCTTCCATATTTT

Coding sequence (CDS)

TTTCGGAAATTGAAAATGGCCAGAAATGTTCTTGAAATGTCCATCAATGGCGAGGAGCCGCCGCGAGCGTACGTAGTGGAAGACTGTGCGTTCGGCGGCGCCGTCGACTGTGGCTCGTCGGCGGGCGAAATTCCGGTCATCGACGTCGGCGTGTTTCTGCCGTCTTCGGCGGCGCCGGAGGCAGAGGTTTTAGACTCCGAATTGAGGAAACTCAGATCTGCTCTCGCAAAACACGGATGCTTTCAGGTTTATAAATTTAATTCCCTTCCATATTTT

Protein sequence

FRKLKMARNVLEMSINGEEPPRAYVVEDCAFGGAVDCGSSAGEIPVIDVGVFLPSSAAPEAEVLDSELRKLRSALAKHGCFQVYKFNSLPYF
Homology
BLAST of MS007089 vs. NCBI nr
Match: XP_022149822.1 (codeine O-demethylase-like [Momordica charantia])

HSP 1 Score: 153.7 bits (387), Expect = 7.8e-34
Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0

Query: 6  MARNVLEMSINGEEPPRAYVVEDCAFGGAVDCGSSAGEIPVIDVGVFLPSSAAPEAEVLD 65
          MARNVLEMSINGEEPPRAYVVEDCAFGGAVDC SSAGEIPVIDVGVFLPSSAAPEAEVLD
Sbjct: 1  MARNVLEMSINGEEPPRAYVVEDCAFGGAVDCDSSAGEIPVIDVGVFLPSSAAPEAEVLD 60

Query: 66 SELRKLRSALAKHGCFQ 83
          SELRKLRSALAKHGCFQ
Sbjct: 61 SELRKLRSALAKHGCFQ 77

BLAST of MS007089 vs. NCBI nr
Match: KAA0047620.1 (codeine O-demethylase-like [Cucumis melo var. makuwa] >TYK08276.1 codeine O-demethylase-like [Cucumis melo var. makuwa])

HSP 1 Score: 105.9 bits (263), Expect = 1.9e-19
Identity = 56/77 (72.73%), Postives = 63/77 (81.82%), Query Frame = 0

Query: 7  ARNVLEMSINGEEPPRAYVVEDCAFGGAVDCGSSAGEIPVIDVGVFLPSSAAPEAEVLDS 66
          ++NVL+MSING+EPP AYVVE CA GG       AGEIP+IDVGVF+PSS +PE EVLDS
Sbjct: 7  SKNVLQMSINGDEPPPAYVVEGCAVGG-------AGEIPIIDVGVFMPSS-SPEPEVLDS 66

Query: 67 ELRKLRSALAKHGCFQV 84
          EL KLRSALAK GCFQV
Sbjct: 67 ELGKLRSALAKEGCFQV 75

BLAST of MS007089 vs. NCBI nr
Match: XP_008450549.1 (PREDICTED: codeine O-demethylase-like [Cucumis melo])

HSP 1 Score: 104.4 bits (259), Expect = 5.4e-19
Identity = 55/76 (72.37%), Postives = 62/76 (81.58%), Query Frame = 0

Query: 7  ARNVLEMSINGEEPPRAYVVEDCAFGGAVDCGSSAGEIPVIDVGVFLPSSAAPEAEVLDS 66
          ++NVL+MSING+EPP AYVVE CA GG       AGEIP+IDVGVF+PSS +PE EVLDS
Sbjct: 7  SKNVLQMSINGDEPPPAYVVEGCAVGG-------AGEIPIIDVGVFMPSS-SPEPEVLDS 66

Query: 67 ELRKLRSALAKHGCFQ 83
          EL KLRSALAK GCFQ
Sbjct: 67 ELGKLRSALAKEGCFQ 74

BLAST of MS007089 vs. NCBI nr
Match: XP_023538165.1 (codeine O-demethylase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 103.6 bits (257), Expect = 9.3e-19
Identity = 54/75 (72.00%), Postives = 62/75 (82.67%), Query Frame = 0

Query: 8  RNVLEMSINGEEPPRAYVVEDCAFGGAVDCGSSAGEIPVIDVGVFLPSSAAPEAEVLDSE 67
          +NVL+MS++G+EPPRAY+VED A GG       AGEIP+IDVGVFLPSS +PE EVLDSE
Sbjct: 10 KNVLQMSVDGDEPPRAYIVEDSAVGG-------AGEIPIIDVGVFLPSS-SPEPEVLDSE 69

Query: 68 LRKLRSALAKHGCFQ 83
          L KLRSALAK GCFQ
Sbjct: 70 LGKLRSALAKEGCFQ 76

BLAST of MS007089 vs. NCBI nr
Match: XP_022966075.1 (codeine O-demethylase-like [Cucurbita maxima] >XP_022966076.1 codeine O-demethylase-like [Cucurbita maxima])

HSP 1 Score: 102.8 bits (255), Expect = 1.6e-18
Identity = 54/75 (72.00%), Postives = 62/75 (82.67%), Query Frame = 0

Query: 8  RNVLEMSINGEEPPRAYVVEDCAFGGAVDCGSSAGEIPVIDVGVFLPSSAAPEAEVLDSE 67
          +NVL+MS++G+EPPRAYVVED A GG       AGEIP+IDVGVFLPSS +PE EVLDSE
Sbjct: 10 KNVLQMSVDGDEPPRAYVVEDSAVGG-------AGEIPIIDVGVFLPSS-SPEPEVLDSE 69

Query: 68 LRKLRSALAKHGCFQ 83
          L KLRSAL+K GCFQ
Sbjct: 70 LGKLRSALSKEGCFQ 76

BLAST of MS007089 vs. ExPASy TrEMBL
Match: A0A6J1D917 (codeine O-demethylase-like OS=Momordica charantia OX=3673 GN=LOC111018162 PE=3 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.8e-34
Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0

Query: 6  MARNVLEMSINGEEPPRAYVVEDCAFGGAVDCGSSAGEIPVIDVGVFLPSSAAPEAEVLD 65
          MARNVLEMSINGEEPPRAYVVEDCAFGGAVDC SSAGEIPVIDVGVFLPSSAAPEAEVLD
Sbjct: 1  MARNVLEMSINGEEPPRAYVVEDCAFGGAVDCDSSAGEIPVIDVGVFLPSSAAPEAEVLD 60

Query: 66 SELRKLRSALAKHGCFQ 83
          SELRKLRSALAKHGCFQ
Sbjct: 61 SELRKLRSALAKHGCFQ 77

BLAST of MS007089 vs. ExPASy TrEMBL
Match: A0A5D3CD57 (Codeine O-demethylase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G00500 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 9.0e-20
Identity = 56/77 (72.73%), Postives = 63/77 (81.82%), Query Frame = 0

Query: 7  ARNVLEMSINGEEPPRAYVVEDCAFGGAVDCGSSAGEIPVIDVGVFLPSSAAPEAEVLDS 66
          ++NVL+MSING+EPP AYVVE CA GG       AGEIP+IDVGVF+PSS +PE EVLDS
Sbjct: 7  SKNVLQMSINGDEPPPAYVVEGCAVGG-------AGEIPIIDVGVFMPSS-SPEPEVLDS 66

Query: 67 ELRKLRSALAKHGCFQV 84
          EL KLRSALAK GCFQV
Sbjct: 67 ELGKLRSALAKEGCFQV 75

BLAST of MS007089 vs. ExPASy TrEMBL
Match: A0A1S3BNU3 (codeine O-demethylase-like OS=Cucumis melo OX=3656 GN=LOC103492112 PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.6e-19
Identity = 55/76 (72.37%), Postives = 62/76 (81.58%), Query Frame = 0

Query: 7  ARNVLEMSINGEEPPRAYVVEDCAFGGAVDCGSSAGEIPVIDVGVFLPSSAAPEAEVLDS 66
          ++NVL+MSING+EPP AYVVE CA GG       AGEIP+IDVGVF+PSS +PE EVLDS
Sbjct: 7  SKNVLQMSINGDEPPPAYVVEGCAVGG-------AGEIPIIDVGVFMPSS-SPEPEVLDS 66

Query: 67 ELRKLRSALAKHGCFQ 83
          EL KLRSALAK GCFQ
Sbjct: 67 ELGKLRSALAKEGCFQ 74

BLAST of MS007089 vs. ExPASy TrEMBL
Match: A0A6J1HQK7 (codeine O-demethylase-like OS=Cucurbita maxima OX=3661 GN=LOC111465790 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 7.7e-19
Identity = 54/75 (72.00%), Postives = 62/75 (82.67%), Query Frame = 0

Query: 8  RNVLEMSINGEEPPRAYVVEDCAFGGAVDCGSSAGEIPVIDVGVFLPSSAAPEAEVLDSE 67
          +NVL+MS++G+EPPRAYVVED A GG       AGEIP+IDVGVFLPSS +PE EVLDSE
Sbjct: 10 KNVLQMSVDGDEPPRAYVVEDSAVGG-------AGEIPIIDVGVFLPSS-SPEPEVLDSE 69

Query: 68 LRKLRSALAKHGCFQ 83
          L KLRSAL+K GCFQ
Sbjct: 70 LGKLRSALSKEGCFQ 76

BLAST of MS007089 vs. ExPASy TrEMBL
Match: A0A6J1FB89 (codeine O-demethylase-like OS=Cucurbita moschata OX=3662 GN=LOC111444057 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 7.7e-19
Identity = 54/75 (72.00%), Postives = 62/75 (82.67%), Query Frame = 0

Query: 8  RNVLEMSINGEEPPRAYVVEDCAFGGAVDCGSSAGEIPVIDVGVFLPSSAAPEAEVLDSE 67
          +NVL+MS++G+EPPRAYVVED A GG       AGEIP+IDVGVFLPSS +PE +VLDSE
Sbjct: 10 KNVLQMSVDGDEPPRAYVVEDSAVGG-------AGEIPIIDVGVFLPSS-SPEPQVLDSE 69

Query: 68 LRKLRSALAKHGCFQ 83
          L KLRSALAK GCFQ
Sbjct: 70 LGKLRSALAKEGCFQ 76

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022149822.17.8e-3498.70codeine O-demethylase-like [Momordica charantia][more]
KAA0047620.11.9e-1972.73codeine O-demethylase-like [Cucumis melo var. makuwa] >TYK08276.1 codeine O-deme... [more]
XP_008450549.15.4e-1972.37PREDICTED: codeine O-demethylase-like [Cucumis melo][more]
XP_023538165.19.3e-1972.00codeine O-demethylase-like [Cucurbita pepo subsp. pepo][more]
XP_022966075.11.6e-1872.00codeine O-demethylase-like [Cucurbita maxima] >XP_022966076.1 codeine O-demethyl... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1D9173.8e-3498.70codeine O-demethylase-like OS=Momordica charantia OX=3673 GN=LOC111018162 PE=3 S... [more]
A0A5D3CD579.0e-2072.73Codeine O-demethylase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... [more]
A0A1S3BNU32.6e-1972.37codeine O-demethylase-like OS=Cucumis melo OX=3656 GN=LOC103492112 PE=3 SV=1[more]
A0A6J1HQK77.7e-1972.00codeine O-demethylase-like OS=Cucurbita maxima OX=3661 GN=LOC111465790 PE=3 SV=1[more]
A0A6J1FB897.7e-1972.00codeine O-demethylase-like OS=Cucurbita moschata OX=3662 GN=LOC111444057 PE=3 SV... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS007089.1MS007089.1mRNA