MS007087 (gene) Bitter gourd (TR) v1

Overview


Name	MS007087
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	26S proteasome regulatory subunit RPN13 isoform X1
Location	scaffold25: 27937 .. 38157 (-)
RNA-Seq Expression	MS007087
Synteny	MS007087

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGGAAATACTTTTGGAATTTCGTGCAGGAAAAATGTGTTTTGAAGGAAAAAGGGTTGTACCTGATACACGTAAAGGACTTGTTCGTATTGGAAGGGTAAGTTTAATATTGTACATATTTACATATTTCTATTTTTTGTGGAATTGATTCCTTTTTATGAGACTCCCGCATTGGTTGAAGGCAAACTTAAGATATACAATGGCGCCAGAACCAAATTTTTAGTGGATATATGGGAAGGGACGAAGTGAAGAAGGAAGATGGGGCAATTGCCCCCTCTGGGTTTGTCTTAAAGTAAAAAAGTTATATAAAAAAGTTAAAGCTTTTAAATATATATTTTCTCTATTTTACCCCTTTAGATTTTCAGAATTAAACAATTATGTGTAAAAGTCGGAATGTAAAATTTTGCCCATTTTTGTGAAATTTTTTTACTCCATTAGGTTGGTCATATGTTGGTTGTTGACTAGTTGGTTGATCCTTTTTTCTAAGTACAGTAATTGTGGGGTGGTGGGGATCAAACCATCAATGTTTGTGATGGTAATAGGTGCTGCCTTATTGACAGAGGGATGCTCGGATTGGCTAGTTGGTTGATCTATATTGGTGTCTTATTTAACTTGATTACCATCCTCTCATGACCATTGGATCATTATCACTAGCATCTTTGATAAGAGAAAATGGAATCAATAGTTTAAACCTGATCATTAGGAAAAGCCCCAGCGATGAATATCCCATCTATTATGTTGATGGGGTCCTTGCACCCCATTAAATTGGGCATCATAATTTGGAGCCGAAAAGTGATGTGAGTTTCTTTGTACCCCCTAGAGTTCCCCTTGAGAGGAATTCTTTTTGGCACTCTATCATTTCTAGTCTTTATGGTGAGGAAAAGGGGGCTGGTTTATATGCAAACACCATAAGCTTGAAGCCTTAAATCATTGGACATTTGTGGTTCAATATAGAAAGATCCAAGAAGAATCCTCCCTCATCAGAACTGGCGATGGGGACAGTATCAATTTTTGGCGTCAACATCAAGGAGACAATCCTGAATTTTCCAGCTCTATAATAACAAAGAAGTTACTTTAAAGGCGGAAGGCCAAGCAAAAGTCCTTTGGTCGAATGTGATTGTGGGTCTACTTTGGAGAGGTGTGGCACGAAAGAAGCAAAAGAACTTTCCAAGATAGAGACACGGAGAGTGCTACTTTTTGGGATCTTGTAAAAATTTTGCCTCTTCTTAGTCATCATCAAAAGTTACCTATGCTCATCATATATATATATAATCGAGAAAAAATCGTTCTTTCATTGAGAAGAATGAAAGAATACAAAAGGGGCAACTATAGGGCCAACAAAAACCCAAGAAAGATGGGTTTGCAAAGCACAGCTCAAAAAGAACCTAATCTAACAAAACATAAAAAGGACTCTAATCCAAAAGAATAAGACTCACTTAACGAATAGTTACAAAAGTCTCTTGAAATAGACACTGAAAGTGAGACATTAAATCTAGCAAGGGACCCAACCTCATACTAAAACCTCTTCACTACCCTAAAGATTCTATTGTTCCTCTCAAGCTAGATACACCATAAAACTGCAAAAAGCCCTCCCCTCCCTTTTAACGCATTTTTTGATAGAGTTATTGTGTTAGCTCTTGGCTGGTTTACATATTTTTATTTCCCTTTTAATAGCTACAATCTCAAGGATCTTGGAAGGCCTTTTTGTAATCCAGCCTTTGGGTCCCTTTTGTATATTGCATCTCATCAATCAAATTATTATTTCTTACCCCCCCAAAAAAAAAAAAAAAACTGCAAAATGTGAGCCCTCTAGAGAATACTATAATTCTCTCTAATGTGTGGATGAAACAGAATCTCCTCCATCATTAAATAAAGATCCTTGTACTGGGCCAAATAGACCCCAAAACCTCAAGAAAACAGTCTCTAAGGGAGCAAGTGAACCGACAATTCCAAAAATATGCTCTTCACTTAGCAATATGGAGGGTATTGGTCATCACCAGTGCCACTATCCTTTTCCTCTTCCCTTTCGTATTTGCTAAAAGTTACTTTATTAAAATTTTCCTAAGAGAACTTCATTCTTCTTCATATATCCCCAGTGTTGAACCCCCTTACTCATCATTAAAAACACCTGCTGATGGGGAATGATTCATTTCCTCCAAGTTTGGCCTCTTTTTCAAGAACTTTGCTTGTGTCTTCTAATTATCTTTGTAGACTTCCATGAGATAGAAAAAAAAACAAAGCATGAAATGGCATACTAGAAAGAACCAAATATATCGAAGTCAACCGGCAACCCTACCTCCATTTTTTTTATAAGAAACCGAGCTTTTATTTAAAGGCGTATAAAAAAAATGACAATAAATAAACAGCTCAACAAAAAGAAGCCAAGCCTACAAAAAGGGGCTACAATCGAATCCACAATAATAACACCTCACAGATAATTACAAAACTCTTTTATAATCGAGGCCTATGAGGAAGTATTAAATCTAATAAGCTCAAAGGTAGCTTTCCCTGACCTCTCTAACCGTTAACCTCTCTAACCCTCTGAAAACTCTATTATTTCTCTCAACCCTATATTTGTTGTCACCGACAGTTGAACCTTTATTTATTTATTTGGTTGTTGTATTTCTGTGTTTTTTATTTTCCCTCTTGGTTTATACTTTGCTTGGTTTGCATTTTTCTATACTTCAAGAAAGCTGGTTTTCCCTCTAAAGAAAAAAGGAAGAAAGAAAGGGGGAGGGGAGGTTTATCCTTTGTTTTGGTTTGCCTTTTTCTATACTTCATGAAAGCTGGTTATCTCTTTAAAGAAAAAAGTAAGAAAGAAAGGGGGAGGGGGGGTATCCTTGTATGTTTCTGAAATTTTCTTTCCTCTGTTGTTGTTCTTAATATATTTATTTGTTTCCCCTTGTTATGTATGTGTAGATCTGTTAGGGTCATGCTTTCTAGTTGAACCTAATTCTTTGTCAGATAAAACTAACGTTTCTGATTGAACCTCGTGTTATCTTTTCTATGTCAGGGTGAGGAGGGATTGCTGCACTTTCAATGGCTTGATCGGACACAAAATGTCATCGAAGATGTATCCTGATTATTGTTGTGTCAATTGTCAATTCTTTGTTTCTTGGTCAATGAATATACCTTTCAAAGATCTTATAGACTATTTGATTCACTTGACATTTTAAAGCTCAATCCCACTAGAAAATGGACAAAGGATAAAGATGAGTTGAAAAGATTCATATCTCAGAGCATACATTAATATAAGTTCAGGACCTACATTTTAAGCCCTAATGAAGAGCAATTTTTCTTTTTGTTCCCCCTGTTTAATAATACTTCATCGTGAAATATTTTTTAATATCCTAGTTGAAATGCAGTAAAAAGACAATTAACTAAGCTCCCATAATGAAAACAAACCTTCTGTTAATGGAAATAGATATTCGGTTGTGACTCTCTCCAAGCAGTGGAAATAATTTTAATTTTAATATCATATTTTTAAAAATTTTTGGTGTGTGTTTTCTTATTGAGTGGTCCATACTTTCTGTTGCATGGATGGCTTTTGTTTCATGTTGATTGCATGTTCTCTCTTTATTAGTATATTCATTAAAGTTGATGTGTCATAGTAATAAGACCATATTCACTATGTTGTTGCATCGGAGTCTTCTCTTTTCTGTAGATGACTTCTTTCTGCCATTACCATTTTATTGGCTAGATGTTTTTGATTTCCTTAACACAAGGTATCAAAGGATCAGATTGTTTTTCCTGATGAAGCTGTTTTTGAGAAGGTGTGTTATACTCACTCTCTCTCTCTCTCTCTAAACAAAAAGGAAAAAGGAAAAAAGAAGCACTTATATTGAAAAAATAGAAAGAACTATAAAGTGGGAGAAGGGGGGAACTAGGAGTGCAATCCTATCTAAAGAAGGTAAGGATATTAGAAAGAATCAAGCAGTAACTGAAAAGGAAGAAAATTACCATACTTTTCTGTAATCAGATGCTCAGAAAGGTACATTAAAACACACGTTTCCAAGCTCCCCTTCCGTGTCTCTAGTCTCTTCAAAGACTTCCCACGAGACTACTATAATGAAATTTGTCCTAATAATCCTAAATTTTGTCCCTAAAATTTATACTGAAAAGTTCGAACAACTAATCTCCCACTTCCATGGGTGCAACTCAATAAAGGTCAAAAGTCTTTCATTGTTTCTTCCAAATGCTGTGGGAGAAGTAGAATTGTATAGAGAGCTGATCGACATTTTTCCACTCTTCTATACAAACACACATCCATTGAATGAACAAGGTGGGGTATCTTTGAACCCACTTGTTAATTAGCATTGATCATTGAATTTCTGAAGTACACAACCAAACAAAAAAATTTCAACTTTTGGGGGGCTTTGGATTTCCAATCAGCAGACTAACTCAGGGGATAAGACATAGATGCTACCCTGTAATAAGTTTTCATTAGAATGATTTACCTGAAAGGTTTCTTAATGCTTGTGAGTTTCTGACTAGACAACCATAATGTCAAGTCATGCCTTGAGCAAAGTAGTCCAACCTCTCCCAGATTAGAATCAAGGGCCGTCTATCTCCAGCCCTCATTCATATTTTGTCTAGAACTCAAAGTTCTAAGATTATGATTAGCTTGAGTATGAGTGTGAATCTGAGAAAATTTGATGGATTAGTTACATTTCTCCCAATAGGAGAGATTTCGTAATTCATTTTGCTTTTGGGATTCAGCCTTTGCATGTTTCATTGTTACAATGAATTGTTTTGTTTATTATGAAAAGGGTTGGTGAGGAAGGGTGCTAGTTCAGGAAATAGAACTCCAATTACAGTGACTGCTTCCCCAACTTTAGTACTCCAACCATTGGTAATGACAGAGTGCCACATTAATGCTTGCTTAAATTATGGGACTAAATTTTTATTATTAAACTGGCATTTCGGAGGTGTTTGTAGATGTCTCGCATATATATGTATGTTCGTATGATGACCTTAACGATCATGAAGTCAGTAAATGATTAAATAACTGAGCAGTAAATGGTAGTCGGGTGAATAAATAAGTAATCGCTTAACTAATTAAAATATAAGGCGTCATTCAGTCACACACAGAGAGATCCAAAATCTCTCTTCCCCATCTTTATCCTAAAAATTAGCCAATTTCTCCAATTAGTGTTCCATTTGAAAAGTTGCAAAAGGAAATGGTTTCTTGTGAAGTATTTTGGGCTAGAAGAAAGTTGGCGTTGCTCTCCTAGCGGAAAAAAGAGTTAGCTGAAGCATTCTCTATCTGCGCTTGCTTCTTCTATTTGAAGAAAGGAGATCCAAGAAGACTCATTTTAGGCTATCTCCTTGGTTCTTTAAAGGTCTCCTCCTCTTGATATTTTGGCATTTGAAATTCTCATTTGAGTTATCGGGATAGAAGAAGGTCAGATCTGTTTTCCGATTGACAAAAGGGGTAGGCACTGCAAGCCACAAGTTATTATTCTTGAAGTTGGTCTTTTGAGGTCTTATTTCATATTTGAAGGGACCAATTCACTCTCTTTTGGCACGGTTCATTGTCAAGTTTTTTGAAGATCATCAGCTTGTCTTAACTTGTTTCTTCTGACCTTTTCTTGTATTGGCTCTTTTATATGTATTTGTTCGTCTTTTTTACTGCTCTTACACTTCTTCAGGAGTTTGTATCTTTGAACGATTTGTTCTTCCATACATCAATGAAAAGTTTGTATCTTGTTAAAAAAAGTATTCAATTTCTCTCTTCCAAATCTTCCTCTATTTCTATACAATTTTATTGTCAAAATGATCCTGGATTTCTCCTTCAAATCTAGACCATTAGCAACTTGGTAGAAAAAGTTTCCCATTCCCATAGGTGCATAAGTTCTTTTGCTTCATGCCACTAGGGTTCTTTTACGGGAGGTTTGTTTGGAGAAATAGGAGAATCTTTCAAGGAGCGGAGAGGGCTTGGCAAGATGTTGATGTGTTTAATTTTGTGGCTTTCCCTTGTAGTGTTTTGTCTAATTCTTTTTGTACCTACTTATTTCTTCTACCATTAAATAATTGCTTGGCTTTTAATTTTTTTGTTTCTTATCCAAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCATCTATGATCATTGTATTTTTTGGTCTACTTAAGGTTAATCAAGCGTCGGGAAGAGTTTACTTATTGAAGTTTAAAACAGATGACAGAAAGTTCTTCTTTTGGATGCAGGTCAGCATCTGTGATTACTTTTTGTTGTTTGAAAAAAGTTGATTTGTATTCTACTATTTTCACAATTCTGACTATTGTTAGATATAACTGTAATCAGGAGCCCAAAGCTGAAGAGGACCAGCAGTTGTGTAGCTCCATCAACGACTACCTAAATCGGCCATTGGGTACTTCCTAGTTATCCTATTTGTTCGAGTATTTGCTGACTGAAGCTTGTAATAATAACTTCCTAACCAGTTTATGCTCTGGGTCAAGTGTCGGCTATTATTTATAGTTCTGTGTCACATGTTGCATACATACATACAACGCTTATATTACTGAAATGTTCTGGCACTTGAATTTACATTTTCCAAAGTTTCTTTATCGTCTAACGATTATCATTAACATACATGAACCTAACTAGACCTGCAAAATGGATGAAGAAACCACATAAATATATTGTGGAAATTGTTTTTCACTAACTGCCATCTTCGTTGCACATTCCTAGTTAGTCAGTTGTGTGAATCATTTTGGATTTATGCTAATGAATGATATCAAAATTGGCATGTGTGACATATTAATGCCGGCATTAAAATATGACGTATTGGTTTCTCTGGAATTAAGTACATCCATAATGGAAGTTCAGTGGAATGTGTGCTGGAATTAATTGTTTGGTTTTGAGTGCACGGGATCACAGAGGAGCTGCTTTATAACCAGTTGTCCCACCCCATTACCTCTATTTTTGTTTATGTTGGTCAGAGTTCCTTGAGGAAGAACCTGTTGCTTCCACTCCTATACAAGTTTCAGAAGGCACAGTCGAAGAAAATATCCCATCAAGGTATAGCAAAGACCTACCTCTTTGTTTGGTTTTATTAATTTCTTTAGAAGCCCTTTTGAGGCTTCAAATGGGTTTTCTTTGGGCTGTAGTAGCCCTAGCTGCACTTTCAAGTACAGCACAGAGAAAAATATCCAATCAAAGTATAGCAATGACCTAACTTTTTTTAAAATAACCCTTTTGAATCTTCAAATGGGTTGGGTGGTATAGCCTAGCCCTAGCTACACCTTCAAGTCATTTTTAAATAATGAAGAAAATCATATAGAAAATTTAATAGTGGTAACTTTTCACAGAAATAAAAAAGAAAAAAAAAATTATAGCAATGGGAAATTGTCGCCTGTTCTTATGTGATTCAACTGAAATCTAATTTCAAGTGAGAATACTTGGTGGGAAGAGAACTTTCGAGTGAGTTTGAGATAACTTTAAAGTGTAATTTTTTTTTTTAGTAAAATACTGGAGAAGCATCCATTAGTGCATTGTTTGAAAGTACAAAGTGTTTAAAATTTGAAAAATCACTTACGATTAGGTAATGTGAAAATTTTCAATTTTTTAAAAATACTTTCTAATCCATTGACAGCACTTTCACCCATTGATAAACTCATAATTTTGACAGAAATAACTTTTCTTATTAAAGAGAATGTTATAACTTATAATGCATTCAAAAAAAGAAGAAAAAAATCAGGAAACAGTTATTAATTGTTACTGACTTTTGTTTTTAGAAACAAATAACTATTTTGAAAACAGTATAATCTCTCAGTTTTTCAGTAACTAATATTGAGAAGAGTTTGTAATTATATTTCTAAATTTGTTGGAGATAGCTGAACCCTATTTCTTCAAGTCTTGTGAGCATAGGCTACGTGTGATTTGGATTTTGGGATGTGTTGTATGAAAATTTTCCTACTTTCTATTTCTTAGTCTGAATATTTTCCCTTAATGGTTTTGTTTTGTTTTGTTTTTATGTTTTTCCTCCGTTGGCTAAAAATTTTGCCAATCAATTTTGATGTCATGACATTGAAGCTCCTCACTACGGCCAGTGAAGTTGGAAGACCTGCAAAGAATTTTAAGTCACATTGACTCTTCTGGTACAAGCCCCTCGAACATGTTCTAGTTCTCATTCTGTTCCTTTTGATCACTCCAAAATCTAATACTTTTGTGCCGGTGTTGAACTCTGCAGATATTGATCTTGATCCAGATGCAGGTAATAAGTTACATGAAAAAATCTTTCACATTTCTTGTTGTCTATCATGTAGATGTAATAATGTATTGTATCATTCATCTGGGAGAATTCCTCCCATTTGTACGAATCATGTATTTTTAAAAGTATTTTTTAAAAGCGATTGATATTCAACCAATGTTTGTCTATCTTTTAGATAAGAAAACTATTTCATTAATCAATATAATTTACAAGACATAAAGCTACCAAATTAAAGGATAATTTCTCCCATTGGTAGAAGTAGAAATCATAGAATGGTAAAAAAAGACTCAAAACTACAGAAGGTTATCCCTACCCACAACCTTAGAAAATTCTTCTACTCCTTTCCAGCGAGTCTCCTAATGAGTTCCAAGGTCATCCAACTTCAACCAGAGAATCTTAGCTTTGTCTTAGAAAGTTGGCATAATTTTGTTCGTTCTACTTTTCTTATCTTCTCCCTTTCCCTATAAATTTACAGTTTTATGTTGGCACTTCCTCTATAATGCAGGTTTTGGATTGGGAGATTTATTAAAGCCTGACCTGATAATGCCATTGCTGGAAACGTTGCCGTTGGAACAGAGTTTAGCTTCTTATTTACCTGAGGTATGCACCACTTTGGTACTTGATCGATCCCTTTGATACTTTATTTTTCGTTTGATTATGTTCTGATTGCAGGGTCCATGGTCTCCTGAGGATATATTGGAACTGTTACAAAGTCCACCTTTTCGTCAACAAGTAGAGTCATTTACTTATGTAATAATCTAAACTCTAGATTTTGGTTTCTTACTTATTAATATTTGGTGCTCAAATTTGTTTGTTCTCTTACCATATTTTGGTATTGATGTTTCTCTAGGTTCTTCGGACTGGACAGATAGATTTGTCTCAGTTTGGGATAGACCCGAGCAAATGTAAGTAGATTGTGCTTTGATGAGCTTTTACTTTTTCAATAAATGGCATGCTGCTAGTTTTGATATCTGAATGCACGCACTTACTGTTTCGTTTTATCATTTTTTGACAAAGTGGCAGATGATCTTGTTCTTTTTCCAAAATAAATAAATAAATGTCATGCTTCTAGGCATTGTTGTCTTCACATTAATTTTGTTGTCGGGGGTGGGGACTTTATTCTCCTTGTTGAGAGGTTGGCTTTAGTAATGGTGATCTCGAGGGGTGTCCAGATGGTAAGAGTTTATAATACCTGAAGACGGTTGTCATGTGAGATTAGTTGGGGTACGCGTAAGCTGGTCCAATTTGGAGACAGCTTTGAAGGTGTCCTAAATAGGACCCATTTGGTAATGTTTTTGTTTCATATTTCTTGTTTCCCATTTCTCCTTTCTCATTTTCTATTTCTTGTTCCCTCTTTTCAATAAACACTGAACTATGTTTGGTTTTTTTTCTTATTTCTTTCTTTTTTATTGAAAAAATAATGAAAACATAGTTGTTAAATAATGAACTATGTTTGATTTTGTTGTTTCCAAAATTTGTACACAATTTTAGAAACGTTTGCCAAACACTCATCACTTATGTTTCTCAGAAATTGGAAACAAAAAACATAAAAGTTATCAACCATGCTCTTAAAAACTTGGTGGGCGAAGCATCCTTGGGGATTAGAAGAGGTAGGGCCGTGAACAAGGAGTGCGACCTCATTACTCTGATTAAAAGAAAAAGTGATAGATTTGCATCTGCTGCACCCGACCTGGTTGTCAGTTCCTTTTCTTGCTGCTCTAAAAAATTGCAGTGTTTAAAGATTCTCCCGTTTCTTGCAGACAAGTTTACAGTATTGTCTTTTCTCGAGGCCCTCGAGGATTCTGTTTCCAAAATGCCAAATTCCGAGCAGGGGCAAGATGACAAGGATGTAAGATCTCAGTCCTGTAATCGTAACGACTCAATGGATGAATCA

mRNA sequence

CAGGAAATACTTTTGGAATTTCGTGCAGGAAAAATGTGTTTTGAAGGAAAAAGGGTTGTACCTGATACACGTAAAGGACTTGTTCGTATTGGAAGGGGTGAGGAGGGATTGCTGCACTTTCAATGGCTTGATCGGACACAAAATGTCATCGAAGATGATCAGATTGTTTTTCCTGATGAAGCTGTTTTTGAGAAGGTTAATCAAGCGTCGGGAAGAGTTTACTTATTGAAGTTTAAAACAGATGACAGAAAGTTCTTCTTTTGGATGCAGGAGCCCAAAGCTGAAGAGGACCAGCAGTTGTGTAGCTCCATCAACGACTACCTAAATCGGCCATTGGAGTTCCTTGAGGAAGAACCTGTTGCTTCCACTCCTATACAAGTTTCAGAAGGCACAGTCGAAGAAAATATCCCATCAAGCTCCTCACTACGGCCAGTGAAGTTGGAAGACCTGCAAAGAATTTTAAGTCACATTGACTCTTCTGTTTTATGTTGGCACTTCCTCTATAATGCAGGTTTTGGATTGGGAGATTTATTAAAGCCTGACCTGATAATGCCATTGCTGGAAACGTTGCCGTTGGAACAGAGTTTAGCTTCTTATTTACCTGAGGGTCCATGGTCTCCTGAGGATATATTGGAACTGTTACAAAGTCCACCTTTTCGTCAACAAGTAGAGTCATTTACTTATGTTCTTCGGACTGGACAGATAGATTTGTCTCAGTTTGGGATAGACCCGAGCAAATACAAGTTTACAGTATTGTCTTTTCTCGAGGCCCTCGAGGATTCTGTTTCCAAAATGCCAAATTCCGAGCAGGGGCAAGATGACAAGGATGTAAGATCTCAGTCCTGTAATCGTAACGACTCAATGGATGAATCA

Coding sequence (CDS)

CAGGAAATACTTTTGGAATTTCGTGCAGGAAAAATGTGTTTTGAAGGAAAAAGGGTTGTACCTGATACACGTAAAGGACTTGTTCGTATTGGAAGGGGTGAGGAGGGATTGCTGCACTTTCAATGGCTTGATCGGACACAAAATGTCATCGAAGATGATCAGATTGTTTTTCCTGATGAAGCTGTTTTTGAGAAGGTTAATCAAGCGTCGGGAAGAGTTTACTTATTGAAGTTTAAAACAGATGACAGAAAGTTCTTCTTTTGGATGCAGGAGCCCAAAGCTGAAGAGGACCAGCAGTTGTGTAGCTCCATCAACGACTACCTAAATCGGCCATTGGAGTTCCTTGAGGAAGAACCTGTTGCTTCCACTCCTATACAAGTTTCAGAAGGCACAGTCGAAGAAAATATCCCATCAAGCTCCTCACTACGGCCAGTGAAGTTGGAAGACCTGCAAAGAATTTTAAGTCACATTGACTCTTCTGTTTTATGTTGGCACTTCCTCTATAATGCAGGTTTTGGATTGGGAGATTTATTAAAGCCTGACCTGATAATGCCATTGCTGGAAACGTTGCCGTTGGAACAGAGTTTAGCTTCTTATTTACCTGAGGGTCCATGGTCTCCTGAGGATATATTGGAACTGTTACAAAGTCCACCTTTTCGTCAACAAGTAGAGTCATTTACTTATGTTCTTCGGACTGGACAGATAGATTTGTCTCAGTTTGGGATAGACCCGAGCAAATACAAGTTTACAGTATTGTCTTTTCTCGAGGCCCTCGAGGATTCTGTTTCCAAAATGCCAAATTCCGAGCAGGGGCAAGATGACAAGGATGTAAGATCTCAGTCCTGTAATCGTAACGACTCAATGGATGAATCA

Protein sequence

QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEEDQQLCSSINDYLNRPLEFLEEEPVASTPIQVSEGTVEENIPSSSSLRPVKLEDLQRILSHIDSSVLCWHFLYNAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVESFTYVLRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKMPNSEQGQDDKDVRSQSCNRNDSMDES

Homology

[Close]

BLAST of MS007087 vs. NCBI nr
Match: XP_022149851.1 (26S proteasome regulatory subunit RPN13 isoform X1 [Momordica charantia] >XP_022149852.1 26S proteasome regulatory subunit RPN13 isoform X1 [Momordica charantia] >XP_022149853.1 26S proteasome regulatory subunit RPN13 isoform X2 [Momordica charantia])

HSP 1 Score: 550.4 bits (1417), Expect = 9.1e-153
Identity = 281/291 (96.56%), Postives = 284/291 (97.59%), Query Frame = 0


Query: 1   QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDE 60
           QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDE
Sbjct: 13  QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDE 72

Query: 61  AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEEDQQLCSSINDYLNRPLEFLEEEPV 120
           AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEEDQQLCSSINDYLNRPLEFLEEEPV
Sbjct: 73  AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEEDQQLCSSINDYLNRPLEFLEEEPV 132

Query: 121 ASTPIQVSEGTVEENIPSSSSLRPVKLEDLQRILSHIDSSVLCWHFLYNAGFGLGDLLKP 180
           ASTPIQVSEGTVEENIPSSSSLRPVKLEDLQRILS+IDSS +      +AGFGLGDLLKP
Sbjct: 133 ASTPIQVSEGTVEENIPSSSSLRPVKLEDLQRILSNIDSSDI--DLDPDAGFGLGDLLKP 192

Query: 181 DLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVESFTYVLRTGQIDLSQF 240
           DLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVESFTYVLRTGQIDLSQF
Sbjct: 193 DLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVESFTYVLRTGQIDLSQF 252

Query: 241 GIDPSKYKFTVLSFLEALEDSVSKMPNSEQGQDDKDVRSQSCNRNDSMDES 292
           GIDPSKYKFTVLSFLEALEDSVSKMPNSEQGQDDKDVRSQSCNRNDSMDES
Sbjct: 253 GIDPSKYKFTVLSFLEALEDSVSKMPNSEQGQDDKDVRSQSCNRNDSMDES 301

[Close]

BLAST of MS007087 vs. NCBI nr
Match: KAA0047594.1 (26S proteasome regulatory subunit RPN13 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 521.9 bits (1343), Expect = 3.5e-144
Identity = 263/292 (90.07%), Postives = 277/292 (94.86%), Query Frame = 0


Query: 1   QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDE 60
           QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDE
Sbjct: 13  QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDE 72

Query: 61  AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEEDQQLCSSINDYLNRPLEFL-EEEP 120
           AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAE+DQQLC S+NDY+NRPLEFL EEEP
Sbjct: 73  AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYINRPLEFLEEEEP 132

Query: 121 VASTPIQVSEGTVEENIPSSSSLRPVKLEDLQRILSHIDSSVLCWHFLYNAGFGLGDLLK 180
           VASTP+ VSEGTVEEN PSSSSLRPVKLEDLQRILS+I+ S  C HFL + GFGLGDLLK
Sbjct: 133 VASTPMHVSEGTVEENTPSSSSLRPVKLEDLQRILSNIEPSAYCLHFLDDVGFGLGDLLK 192

Query: 181 PDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVESFTYVLRTGQIDLSQ 240
           PDLIMP+LETLPLEQSLASYLPEGPW+PEDILELLQSPPFRQQV+SFTYVLRTGQIDLSQ
Sbjct: 193 PDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTYVLRTGQIDLSQ 252

Query: 241 FGIDPSKYKFTVLSFLEALEDSVSKMPNSEQGQDDKDVRSQSCNRNDSMDES 292
           FGIDPSKYKFTVLSFL+ALEDSVSK  +SE  QD+KDVRSQS NR+DSMDES
Sbjct: 253 FGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSMDES 304

[Close]

BLAST of MS007087 vs. NCBI nr
Match: XP_011648975.1 (26S proteasome regulatory subunit RPN13 isoform X2 [Cucumis sativus])

HSP 1 Score: 507.7 bits (1306), Expect = 6.7e-140
Identity = 260/292 (89.04%), Postives = 276/292 (94.52%), Query Frame = 0


Query: 1   QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDE 60
           QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQW+DRTQNVIEDDQIVFPDE
Sbjct: 13  QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQNVIEDDQIVFPDE 72

Query: 61  AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEEDQQLCSSINDYLNRPLEFL-EEEP 120
           AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAE+DQQLC S+NDY+NRPLEFL EEEP
Sbjct: 73  AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYINRPLEFLEEEEP 132

Query: 121 VASTPIQVSEGTVEENIPSSSSLRPVKLEDLQRILSHIDSSVLCWHFLYNAGFGLGDLLK 180
           VASTP+ VSEGTVEENIPSSSSLRPVKLEDLQRILS+I+ S +      +AGFGLGDLLK
Sbjct: 133 VASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPSDI--DVDPDAGFGLGDLLK 192

Query: 181 PDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVESFTYVLRTGQIDLSQ 240
           PDLIMP+LETLPLEQSLASYLPEGPW+PEDILELLQSPPFRQQV+SFTYVLRTGQIDLSQ
Sbjct: 193 PDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTYVLRTGQIDLSQ 252

Query: 241 FGIDPSKYKFTVLSFLEALEDSVSKMPNSEQGQDDKDVRSQSCNRNDSMDES 292
           FGIDPSKYKFTVLSFL+ALEDSVSK  +SE  QD+KDVRSQS NR+DSMDES
Sbjct: 253 FGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSMDES 302

[Close]

BLAST of MS007087 vs. NCBI nr
Match: XP_004152857.1 (26S proteasome regulatory subunit RPN13 isoform X1 [Cucumis sativus] >XP_031737034.1 26S proteasome regulatory subunit RPN13 isoform X1 [Cucumis sativus] >KAE8651692.1 hypothetical protein Csa_006084 [Cucumis sativus])

HSP 1 Score: 506.5 bits (1303), Expect = 1.5e-139
Identity = 260/292 (89.04%), Postives = 275/292 (94.18%), Query Frame = 0


Query: 1   QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDE 60
           QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQW+DRTQNVIEDDQIVFPDE
Sbjct: 13  QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQNVIEDDQIVFPDE 72

Query: 61  AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEEDQQLCSSINDYLNRPLEFL-EEEP 120
           AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAE+DQQLC S+NDY+NRPLEFL EEEP
Sbjct: 73  AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYINRPLEFLEEEEP 132

Query: 121 VASTPIQVSEGTVEENIPSSSSLRPVKLEDLQRILSHIDSSVLCWHFLYNAGFGLGDLLK 180
           VASTP+ VSEGTVEENIPSSSSLRPVKLEDLQRILS+I+ S        +AGFGLGDLLK
Sbjct: 133 VASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPSADI-DVDPDAGFGLGDLLK 192

Query: 181 PDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVESFTYVLRTGQIDLSQ 240
           PDLIMP+LETLPLEQSLASYLPEGPW+PEDILELLQSPPFRQQV+SFTYVLRTGQIDLSQ
Sbjct: 193 PDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTYVLRTGQIDLSQ 252

Query: 241 FGIDPSKYKFTVLSFLEALEDSVSKMPNSEQGQDDKDVRSQSCNRNDSMDES 292
           FGIDPSKYKFTVLSFL+ALEDSVSK  +SE  QD+KDVRSQS NR+DSMDES
Sbjct: 253 FGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSMDES 303

[Close]

BLAST of MS007087 vs. NCBI nr
Match: XP_008450644.1 (PREDICTED: 26S proteasome regulatory subunit RPN13 isoform X2 [Cucumis melo] >TYK08253.1 26S proteasome regulatory subunit RPN13 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 506.5 bits (1303), Expect = 1.5e-139
Identity = 260/292 (89.04%), Postives = 275/292 (94.18%), Query Frame = 0


Query: 1   QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDE 60
           QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDE
Sbjct: 13  QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDE 72

Query: 61  AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEEDQQLCSSINDYLNRPLEFL-EEEP 120
           AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAE+DQQLC S+NDY+NRPLEFL EEEP
Sbjct: 73  AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYINRPLEFLEEEEP 132

Query: 121 VASTPIQVSEGTVEENIPSSSSLRPVKLEDLQRILSHIDSSVLCWHFLYNAGFGLGDLLK 180
           VASTP+ VSEGTVEEN PSSSSLRPVKLEDLQRILS+I+ S +      +AGFGLGDLLK
Sbjct: 133 VASTPMHVSEGTVEENTPSSSSLRPVKLEDLQRILSNIEPSDI--DVDPDAGFGLGDLLK 192

Query: 181 PDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVESFTYVLRTGQIDLSQ 240
           PDLIMP+LETLPLEQSLASYLPEGPW+PEDILELLQSPPFRQQV+SFTYVLRTGQIDLSQ
Sbjct: 193 PDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTYVLRTGQIDLSQ 252

Query: 241 FGIDPSKYKFTVLSFLEALEDSVSKMPNSEQGQDDKDVRSQSCNRNDSMDES 292
           FGIDPSKYKFTVLSFL+ALEDSVSK  +SE  QD+KDVRSQS NR+DSMDES
Sbjct: 253 FGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSMDES 302

[Close]

BLAST of MS007087 vs. ExPASy Swiss-Prot
Match: O48726 (26S proteasome regulatory subunit RPN13 OS=Arabidopsis thaliana OX=3702 GN=RPN13 PE=1 SV=2)

HSP 1 Score: 353.6 bits (906), Expect = 2.1e-96
Identity = 181/280 (64.64%), Postives = 214/280 (76.43%), Query Frame = 0


Query: 1   QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDE 60
           QEI+LEFRAGKM  +G RVVPD RKGLVRI RG+EGL+HFQWLDR QN +EDDQIVFPDE
Sbjct: 11  QEIMLEFRAGKMSLQGTRVVPDARKGLVRIARGDEGLIHFQWLDRNQNTVEDDQIVFPDE 70

Query: 61  AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEEDQQLCSSINDYLNRPLEFLEEEPV 120
           A+FEKVNQ+S RVY+LKF +DDRK FFWMQEP+AE D +LCSS+N YLN+PLEF  EE +
Sbjct: 71  ALFEKVNQSSDRVYILKFNSDDRKLFFWMQEPRAEGDAELCSSVNQYLNQPLEFPGEEGL 130

Query: 121 ASTPIQVSEGTVEENIPS-----------------SSSLRPVKLEDLQRILSHIDSSVLC 180
           A+   +  E   E+N  S                 +SS  PVKL DLQRIL+++    + 
Sbjct: 131 AAAITEELEDMAEDNTSSRAGNLVVPNLSSEVSDVTSSSGPVKLADLQRILNNLSGGPVG 190

Query: 181 WHFLYNAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQV 240
                + G  LGD+LKP+LIMPLLE LP+++ L+S+LPEG    EDILELLQSPPFRQQV
Sbjct: 191 IAGDQDEGLALGDILKPELIMPLLEALPVQERLSSHLPEGHSRAEDILELLQSPPFRQQV 250

Query: 241 ESFTYVLRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVS 264
           ++FTYVLRTGQIDL+QFGIDPSKYKFTV SFLEALEDSVS
Sbjct: 251 DAFTYVLRTGQIDLTQFGIDPSKYKFTVDSFLEALEDSVS 290

[Close]

BLAST of MS007087 vs. ExPASy Swiss-Prot
Match: Q6NZ09 (Proteasomal ubiquitin receptor ADRM1 OS=Danio rerio OX=7955 GN=adrm1b PE=1 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 5.0e-37
Identity = 120/386 (31.09%), Postives = 173/386 (44.82%), Query Frame = 0


Query: 4   LLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDEAVF 63
           L+EFRAGKM  +G  V PD RKG V I + ++ L+HF W DRT   +EDD I+FPD+  F
Sbjct: 22  LVEFRAGKMTLKGSTVTPDKRKGTVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDDCEF 81

Query: 64  EKVNQ-ASGRVYLLKFKTDDRKFFFWMQEPKAEEDQQLCSSINDYLNRP----------- 123
           ++VNQ  +GRVY+LKFK   ++ FFWMQEPK ++D + C  +N+YLN P           
Sbjct: 82  KRVNQCTTGRVYVLKFKAGSKRLFFWMQEPKTDKDDEYCRKVNEYLNNPPMPGALGSGGG 141

Query: 124 ----LEFLEEEPVAS--------------------------------------------- 183
               L  L E  + S                                             
Sbjct: 142 GGHELSALGEGGLQSLLGNMSHNQLMQLIGPTGLGGLGALAGPGLASLLGSGGPATSSST 201

Query: 184 ------------------------------TPIQVSEG--TVEENIPS----------SS 243
                                         TP   S G  TV    P+          +S
Sbjct: 202 SSSRSQSAAATPSSGSAARLSSTQAPTTPVTPAATSSGSPTVTPTTPAAQTPSLPAGPAS 261

Query: 244 SLRPVKLEDLQRILSHIDSSVLCWHFLYNAGFGLGDLLKPDLIMPLLETLPLEQSLASYL 277
           S +P++L DLQ IL+ ++   +       +G  L  +L PD++ P+L    ++Q L  YL
Sbjct: 262 STQPIQLSDLQSILATMNVPAMPTE---GSGVDLASVLTPDVMAPILANPEVQQRLLPYL 321

[Close]

BLAST of MS007087 vs. ExPASy Swiss-Prot
Match: A1L5A6 (Proteasomal ubiquitin receptor ADRM1 OS=Bos taurus OX=9913 GN=ADRM1 PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.0e-34
Identity = 112/384 (29.17%), Postives = 165/384 (42.97%), Query Frame = 0


Query: 4   LLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDEAVF 63
           L+EFRAGKM  +G  V PD RKGLV I + ++ L+HF W DRT   +EDD I+FPD+  F
Sbjct: 23  LVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDDCEF 82

Query: 64  EKVNQA-SGRVYLLKFKTDDRKFFFWMQEPKAEEDQQLCSSINDYLNRP----------- 123
           ++V Q  SGRVY+LKFK   ++ FFWMQEPK ++D++ C  +N+YLN P           
Sbjct: 83  KRVPQCPSGRVYVLKFKAGSKRLFFWMQEPKTDQDEEHCRKVNEYLNNPPMPGALGASGS 142

Query: 124 -------------LEFL------------------------------------------- 183
                        L+ L                                           
Sbjct: 143 GGHELSALGGEGGLQSLLGNMSHSQLMQLIGPAGLGGLGGLGALTGPGLASLLGSGGPPA 202

Query: 184 -------EEEPVASTPIQVSEGTVEENIPS-----------------------SSSLRPV 243
                    +  A TP   +  T     PS                       +S  +P+
Sbjct: 203 SSSSSSSRSQSAAVTPSSTTSSTRATPAPSAPAAASATSPSPAPSSGDGASTAASPAQPI 262

Query: 244 KLEDLQRILSHIDSSVLCWHFLYNAGFG----LGDLLKPDLIMPLLETLPLEQSLASYLP 277
           +L DLQ IL+ +             G G    L  +L P+++ P+L    +++ L  YLP
Sbjct: 263 QLSDLQSILATMSVPA-------GPGGGQQVDLASVLTPEIMAPILANADVQERLLPYLP 322

[Close]

BLAST of MS007087 vs. ExPASy Swiss-Prot
Match: Q98SH3 (Proteasomal ubiquitin receptor ADRM1 OS=Gallus gallus OX=9031 GN=ADRM1 PE=2 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 6.8e-34
Identity = 112/385 (29.09%), Postives = 167/385 (43.38%), Query Frame = 0


Query: 4   LLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDEAVF 63
           L+EFRAGKM  +G  V PD RKGLV I + ++ L+HF W DRT   +EDD I+FPD+  F
Sbjct: 23  LVEFRAGKMSLKGSTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDDCEF 82

Query: 64  EKVNQ-ASGRVYLLKFKTDDRKFFFWMQEPKAEEDQQLCSSINDYLNRP----------- 123
           ++V Q  +GRVY+LKFK   ++ FFWMQEPK ++D++ C  +N+YLN P           
Sbjct: 83  KRVPQCTTGRVYVLKFKAGSKRLFFWMQEPKTDKDEEHCRKVNEYLNNPPMPGALGGNAS 142

Query: 124 -------------LEFL------------------------------------------- 183
                        L+ L                                           
Sbjct: 143 GGHELSALGGEGGLQSLLGNMSHNQLMQLIGPTGLGGLGGLGALTGPGLASLLGSGGFPT 202

Query: 184 -------EEEPVASTPIQVSEG---------------TVEENIPSSSS--------LRPV 243
                    +  A TP   +                 T    +PSS S         +P+
Sbjct: 203 SSSSSSSRSQSAAVTPSSTTSSTHVTPAPAVPAAASVTSPSPVPSSGSGTSSATSPTQPI 262

Query: 244 KLEDLQRILSHIDSSVLCWHFLYNAGFG-----LGDLLKPDLIMPLLETLPLEQSLASYL 277
           +L DLQ IL+ ++           +G G     L  +L P+++ P+L    +++ L  YL
Sbjct: 263 QLSDLQNILATMN---------VPSGAGGQQVDLATVLTPEIMAPILANAEVQERLMPYL 322

[Close]

BLAST of MS007087 vs. ExPASy Swiss-Prot
Match: Q6P877 (Proteasomal ubiquitin receptor ADRM1 OS=Xenopus tropicalis OX=8364 GN=adrm1 PE=2 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 8.8e-34
Identity = 107/388 (27.58%), Postives = 173/388 (44.59%), Query Frame = 0


Query: 4   LLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDEAVF 63
           L+EFRAGKM  +G  V PD RKGLV I + ++ L+HF W DRT   +EDD I+FPD+  F
Sbjct: 22  LVEFRAGKMSLKGSTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGSVEDDLIIFPDDCEF 81

Query: 64  EKVNQ-ASGRVYLLKFKTDDRKFFFWMQEPKAEEDQQLCSSINDYLNRP----------- 123
           ++V+Q  +GRVY+LKFK   ++ FFWMQEPK ++D++ C  +N+YLN P           
Sbjct: 82  KRVSQCTTGRVYVLKFKAGSKRLFFWMQEPKTDKDEEYCRKVNEYLNNPPMPGALGGSGS 141

Query: 124 -------------LEFL------------------------------------------- 183
                        L+ L                                           
Sbjct: 142 GGHELSALGGEGGLQSLLGNMSHNQLMQLIGPTGLGGLGGLGALTGPGLASLLGSGGPTT 201

Query: 184 -------EEEPVASTPIQVSEGTVEENIP-----------------------SSSSLRPV 243
                    +  A TP   +  T   + P                       ++S  +P+
Sbjct: 202 SSSSSSSRSQSAAVTPSSTTSSTRTTSAPAAPAAAPATTPSPAVSSNDGASAATSPTQPI 261

Query: 244 KLEDLQRILSHIDSSVLCWHFLYNAGFG-----LGDLLKPDLIMPLLETLPLEQSLASYL 278
           +L DLQ IL+ ++            G G     L  +L P+++ P+L    +++ L  YL
Sbjct: 262 QLSDLQNILATMNVPA--------TGEGGQQVDLASVLTPEIMAPILANAEVQERLMPYL 321

[Close]

BLAST of MS007087 vs. ExPASy TrEMBL
Match: A0A6J1D7V9 (26S proteasome regulatory subunit RPN13 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018182 PE=4 SV=1)

HSP 1 Score: 550.4 bits (1417), Expect = 4.4e-153
Identity = 281/291 (96.56%), Postives = 284/291 (97.59%), Query Frame = 0


Query: 1   QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDE 60
           QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDE
Sbjct: 13  QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDE 72

Query: 61  AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEEDQQLCSSINDYLNRPLEFLEEEPV 120
           AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEEDQQLCSSINDYLNRPLEFLEEEPV
Sbjct: 73  AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEEDQQLCSSINDYLNRPLEFLEEEPV 132

Query: 121 ASTPIQVSEGTVEENIPSSSSLRPVKLEDLQRILSHIDSSVLCWHFLYNAGFGLGDLLKP 180
           ASTPIQVSEGTVEENIPSSSSLRPVKLEDLQRILS+IDSS +      +AGFGLGDLLKP
Sbjct: 133 ASTPIQVSEGTVEENIPSSSSLRPVKLEDLQRILSNIDSSDI--DLDPDAGFGLGDLLKP 192

Query: 181 DLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVESFTYVLRTGQIDLSQF 240
           DLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVESFTYVLRTGQIDLSQF
Sbjct: 193 DLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVESFTYVLRTGQIDLSQF 252

Query: 241 GIDPSKYKFTVLSFLEALEDSVSKMPNSEQGQDDKDVRSQSCNRNDSMDES 292
           GIDPSKYKFTVLSFLEALEDSVSKMPNSEQGQDDKDVRSQSCNRNDSMDES
Sbjct: 253 GIDPSKYKFTVLSFLEALEDSVSKMPNSEQGQDDKDVRSQSCNRNDSMDES 301

[Close]

BLAST of MS007087 vs. ExPASy TrEMBL
Match: A0A5A7TXA8 (26S proteasome regulatory subunit RPN13 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00620 PE=4 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 1.7e-144
Identity = 263/292 (90.07%), Postives = 277/292 (94.86%), Query Frame = 0


Query: 1   QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDE 60
           QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDE
Sbjct: 13  QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDE 72

Query: 61  AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEEDQQLCSSINDYLNRPLEFL-EEEP 120
           AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAE+DQQLC S+NDY+NRPLEFL EEEP
Sbjct: 73  AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYINRPLEFLEEEEP 132

Query: 121 VASTPIQVSEGTVEENIPSSSSLRPVKLEDLQRILSHIDSSVLCWHFLYNAGFGLGDLLK 180
           VASTP+ VSEGTVEEN PSSSSLRPVKLEDLQRILS+I+ S  C HFL + GFGLGDLLK
Sbjct: 133 VASTPMHVSEGTVEENTPSSSSLRPVKLEDLQRILSNIEPSAYCLHFLDDVGFGLGDLLK 192

Query: 181 PDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVESFTYVLRTGQIDLSQ 240
           PDLIMP+LETLPLEQSLASYLPEGPW+PEDILELLQSPPFRQQV+SFTYVLRTGQIDLSQ
Sbjct: 193 PDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTYVLRTGQIDLSQ 252

Query: 241 FGIDPSKYKFTVLSFLEALEDSVSKMPNSEQGQDDKDVRSQSCNRNDSMDES 292
           FGIDPSKYKFTVLSFL+ALEDSVSK  +SE  QD+KDVRSQS NR+DSMDES
Sbjct: 253 FGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSMDES 304

[Close]

BLAST of MS007087 vs. ExPASy TrEMBL
Match: A0A5D3C8P5 (26S proteasome regulatory subunit RPN13 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G00230 PE=4 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 7.3e-140
Identity = 260/292 (89.04%), Postives = 275/292 (94.18%), Query Frame = 0


Query: 1   QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDE 60
           QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDE
Sbjct: 13  QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDE 72

Query: 61  AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEEDQQLCSSINDYLNRPLEFL-EEEP 120
           AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAE+DQQLC S+NDY+NRPLEFL EEEP
Sbjct: 73  AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYINRPLEFLEEEEP 132

Query: 121 VASTPIQVSEGTVEENIPSSSSLRPVKLEDLQRILSHIDSSVLCWHFLYNAGFGLGDLLK 180
           VASTP+ VSEGTVEEN PSSSSLRPVKLEDLQRILS+I+ S +      +AGFGLGDLLK
Sbjct: 133 VASTPMHVSEGTVEENTPSSSSLRPVKLEDLQRILSNIEPSDI--DVDPDAGFGLGDLLK 192

Query: 181 PDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVESFTYVLRTGQIDLSQ 240
           PDLIMP+LETLPLEQSLASYLPEGPW+PEDILELLQSPPFRQQV+SFTYVLRTGQIDLSQ
Sbjct: 193 PDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTYVLRTGQIDLSQ 252

Query: 241 FGIDPSKYKFTVLSFLEALEDSVSKMPNSEQGQDDKDVRSQSCNRNDSMDES 292
           FGIDPSKYKFTVLSFL+ALEDSVSK  +SE  QD+KDVRSQS NR+DSMDES
Sbjct: 253 FGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSMDES 302

[Close]

BLAST of MS007087 vs. ExPASy TrEMBL
Match: A0A1S3BQP8 (26S proteasome regulatory subunit RPN13 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492157 PE=4 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 7.3e-140
Identity = 260/292 (89.04%), Postives = 275/292 (94.18%), Query Frame = 0


Query: 1   QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDE 60
           QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDE
Sbjct: 13  QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDE 72

Query: 61  AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEEDQQLCSSINDYLNRPLEFL-EEEP 120
           AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAE+DQQLC S+NDY+NRPLEFL EEEP
Sbjct: 73  AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYINRPLEFLEEEEP 132

Query: 121 VASTPIQVSEGTVEENIPSSSSLRPVKLEDLQRILSHIDSSVLCWHFLYNAGFGLGDLLK 180
           VASTP+ VSEGTVEEN PSSSSLRPVKLEDLQRILS+I+ S +      +AGFGLGDLLK
Sbjct: 133 VASTPMHVSEGTVEENTPSSSSLRPVKLEDLQRILSNIEPSDI--DVDPDAGFGLGDLLK 192

Query: 181 PDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVESFTYVLRTGQIDLSQ 240
           PDLIMP+LETLPLEQSLASYLPEGPW+PEDILELLQSPPFRQQV+SFTYVLRTGQIDLSQ
Sbjct: 193 PDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTYVLRTGQIDLSQ 252

Query: 241 FGIDPSKYKFTVLSFLEALEDSVSKMPNSEQGQDDKDVRSQSCNRNDSMDES 292
           FGIDPSKYKFTVLSFL+ALEDSVSK  +SE  QD+KDVRSQS NR+DSMDES
Sbjct: 253 FGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSMDES 302

[Close]

BLAST of MS007087 vs. ExPASy TrEMBL
Match: A0A6J1HQU2 (26S proteasome regulatory subunit RPN13 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465791 PE=4 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 1.2e-139
Identity = 262/292 (89.73%), Postives = 275/292 (94.18%), Query Frame = 0


Query: 1   QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDE 60
           QEILLEFRAGKMCFEGKRV+PDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDE
Sbjct: 13  QEILLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDE 72

Query: 61  AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEEDQQLCSSINDYLNRPLEFLEEE-P 120
           AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAE+DQQLC S+NDY+NRPLEFLEEE  
Sbjct: 73  AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYINRPLEFLEEEQS 132

Query: 121 VASTPIQVSEGTVEENIPSSSSLRPVKLEDLQRILSHIDSSVLCWHFLYNAGFGLGDLLK 180
           VASTP+QVSEGTVEENIPSSSSLRPVKLEDLQRILS+I+SS +      +AGFGLGDLLK
Sbjct: 133 VASTPLQVSEGTVEENIPSSSSLRPVKLEDLQRILSNIESSDI--DVDPDAGFGLGDLLK 192

Query: 181 PDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVESFTYVLRTGQIDLSQ 240
           PDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQV+SFTYVLRTGQIDLSQ
Sbjct: 193 PDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVDSFTYVLRTGQIDLSQ 252

Query: 241 FGIDPSKYKFTVLSFLEALEDSVSKMPNSEQGQDDKDVRSQSCNRNDSMDES 292
           FGIDPSKYKFTVLSFLEALEDSVSKM NSE GQD+KDVRS+S    + MDES
Sbjct: 253 FGIDPSKYKFTVLSFLEALEDSVSKMSNSEAGQDEKDVRSES----NLMDES 298

[Close]

BLAST of MS007087 vs. TAIR 10
Match: AT2G26590.1 (regulatory particle non-ATPase 13 )

HSP 1 Score: 353.6 bits (906), Expect = 1.5e-97
Identity = 181/280 (64.64%), Postives = 214/280 (76.43%), Query Frame = 0


Query: 1   QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDE 60
           QEI+LEFRAGKM  +G RVVPD RKGLVRI RG+EGL+HFQWLDR QN +EDDQIVFPDE
Sbjct: 11  QEIMLEFRAGKMSLQGTRVVPDARKGLVRIARGDEGLIHFQWLDRNQNTVEDDQIVFPDE 70

Query: 61  AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEEDQQLCSSINDYLNRPLEFLEEEPV 120
           A+FEKVNQ+S RVY+LKF +DDRK FFWMQEP+AE D +LCSS+N YLN+PLEF  EE +
Sbjct: 71  ALFEKVNQSSDRVYILKFNSDDRKLFFWMQEPRAEGDAELCSSVNQYLNQPLEFPGEEGL 130

Query: 121 ASTPIQVSEGTVEENIPS-----------------SSSLRPVKLEDLQRILSHIDSSVLC 180
           A+   +  E   E+N  S                 +SS  PVKL DLQRIL+++    + 
Sbjct: 131 AAAITEELEDMAEDNTSSRAGNLVVPNLSSEVSDVTSSSGPVKLADLQRILNNLSGGPVG 190

Query: 181 WHFLYNAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQV 240
                + G  LGD+LKP+LIMPLLE LP+++ L+S+LPEG    EDILELLQSPPFRQQV
Sbjct: 191 IAGDQDEGLALGDILKPELIMPLLEALPVQERLSSHLPEGHSRAEDILELLQSPPFRQQV 250

Query: 241 ESFTYVLRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVS 264
           ++FTYVLRTGQIDL+QFGIDPSKYKFTV SFLEALEDSVS
Sbjct: 251 DAFTYVLRTGQIDLTQFGIDPSKYKFTVDSFLEALEDSVS 290

[Close]

BLAST of MS007087 vs. TAIR 10
Match: AT2G26590.2 (regulatory particle non-ATPase 13 )

HSP 1 Score: 353.6 bits (906), Expect = 1.5e-97
Identity = 181/280 (64.64%), Postives = 214/280 (76.43%), Query Frame = 0


Query: 1   QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDE 60
           QEI+LEFRAGKM  +G RVVPD RKGLVRI RG+EGL+HFQWLDR QN +EDDQIVFPDE
Sbjct: 11  QEIMLEFRAGKMSLQGTRVVPDARKGLVRIARGDEGLIHFQWLDRNQNTVEDDQIVFPDE 70

Query: 61  AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEEDQQLCSSINDYLNRPLEFLEEEPV 120
           A+FEKVNQ+S RVY+LKF +DDRK FFWMQEP+AE D +LCSS+N YLN+PLEF  EE +
Sbjct: 71  ALFEKVNQSSDRVYILKFNSDDRKLFFWMQEPRAEGDAELCSSVNQYLNQPLEFPGEEGL 130

Query: 121 ASTPIQVSEGTVEENIPS-----------------SSSLRPVKLEDLQRILSHIDSSVLC 180
           A+   +  E   E+N  S                 +SS  PVKL DLQRIL+++    + 
Sbjct: 131 AAAITEELEDMAEDNTSSRAGNLVVPNLSSEVSDVTSSSGPVKLADLQRILNNLSGGPVG 190

Query: 181 WHFLYNAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQV 240
                + G  LGD+LKP+LIMPLLE LP+++ L+S+LPEG    EDILELLQSPPFRQQV
Sbjct: 191 IAGDQDEGLALGDILKPELIMPLLEALPVQERLSSHLPEGHSRAEDILELLQSPPFRQQV 250

Query: 241 ESFTYVLRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVS 264
           ++FTYVLRTGQIDL+QFGIDPSKYKFTV SFLEALEDSVS
Sbjct: 251 DAFTYVLRTGQIDLTQFGIDPSKYKFTVDSFLEALEDSVS 290

[Close]

BLAST of MS007087 vs. TAIR 10
Match: AT2G26590.3 (regulatory particle non-ATPase 13 )

HSP 1 Score: 353.6 bits (906), Expect = 1.5e-97
Identity = 181/280 (64.64%), Postives = 214/280 (76.43%), Query Frame = 0


Query: 1   QEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDE 60
           QEI+LEFRAGKM  +G RVVPD RKGLVRI RG+EGL+HFQWLDR QN +EDDQIVFPDE
Sbjct: 11  QEIMLEFRAGKMSLQGTRVVPDARKGLVRIARGDEGLIHFQWLDRNQNTVEDDQIVFPDE 70

Query: 61  AVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEEDQQLCSSINDYLNRPLEFLEEEPV 120
           A+FEKVNQ+S RVY+LKF +DDRK FFWMQEP+AE D +LCSS+N YLN+PLEF  EE +
Sbjct: 71  ALFEKVNQSSDRVYILKFNSDDRKLFFWMQEPRAEGDAELCSSVNQYLNQPLEFPGEEGL 130

Query: 121 ASTPIQVSEGTVEENIPS-----------------SSSLRPVKLEDLQRILSHIDSSVLC 180
           A+   +  E   E+N  S                 +SS  PVKL DLQRIL+++    + 
Sbjct: 131 AAAITEELEDMAEDNTSSRAGNLVVPNLSSEVSDVTSSSGPVKLADLQRILNNLSGGPVG 190

Query: 181 WHFLYNAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQV 240
                + G  LGD+LKP+LIMPLLE LP+++ L+S+LPEG    EDILELLQSPPFRQQV
Sbjct: 191 IAGDQDEGLALGDILKPELIMPLLEALPVQERLSSHLPEGHSRAEDILELLQSPPFRQQV 250

Query: 241 ESFTYVLRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVS 264
           ++FTYVLRTGQIDL+QFGIDPSKYKFTV SFLEALEDSVS
Sbjct: 251 DAFTYVLRTGQIDLTQFGIDPSKYKFTVDSFLEALEDSVS 290

The following BLAST results are available for this feature:

BLAST of MS007087 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149851.1	9.1e-153	96.56	26S proteasome regulatory subunit RPN13 isoform X1 [Momordica charantia] >XP_022...	[more]
KAA0047594.1	3.5e-144	90.07	26S proteasome regulatory subunit RPN13 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_011648975.1	6.7e-140	89.04	26S proteasome regulatory subunit RPN13 isoform X2 [Cucumis sativus]	[more]
XP_004152857.1	1.5e-139	89.04	26S proteasome regulatory subunit RPN13 isoform X1 [Cucumis sativus] >XP_0317370...	[more]
XP_008450644.1	1.5e-139	89.04	PREDICTED: 26S proteasome regulatory subunit RPN13 isoform X2 [Cucumis melo] >TY...	[more]

BLAST of MS007087 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48726	2.1e-96	64.64	26S proteasome regulatory subunit RPN13 OS=Arabidopsis thaliana OX=3702 GN=RPN13...	[more]
Q6NZ09	5.0e-37	31.09	Proteasomal ubiquitin receptor ADRM1 OS=Danio rerio OX=7955 GN=adrm1b PE=1 SV=1	[more]
A1L5A6	1.0e-34	29.17	Proteasomal ubiquitin receptor ADRM1 OS=Bos taurus OX=9913 GN=ADRM1 PE=2 SV=1	[more]
Q98SH3	6.8e-34	29.09	Proteasomal ubiquitin receptor ADRM1 OS=Gallus gallus OX=9031 GN=ADRM1 PE=2 SV=1	[more]
Q6P877	8.8e-34	27.58	Proteasomal ubiquitin receptor ADRM1 OS=Xenopus tropicalis OX=8364 GN=adrm1 PE=2...	[more]

BLAST of MS007087 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D7V9	4.4e-153	96.56	26S proteasome regulatory subunit RPN13 isoform X1 OS=Momordica charantia OX=367...	[more]
A0A5A7TXA8	1.7e-144	90.07	26S proteasome regulatory subunit RPN13 isoform X1 OS=Cucumis melo var. makuwa O...	[more]
A0A5D3C8P5	7.3e-140	89.04	26S proteasome regulatory subunit RPN13 isoform X2 OS=Cucumis melo var. makuwa O...	[more]
A0A1S3BQP8	7.3e-140	89.04	26S proteasome regulatory subunit RPN13 isoform X2 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A6J1HQU2	1.2e-139	89.73	26S proteasome regulatory subunit RPN13 isoform X2 OS=Cucurbita maxima OX=3661 G...	[more]

BLAST of MS007087 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26590.1	1.5e-97	64.64	regulatory particle non-ATPase 13	[more]
AT2G26590.2	1.5e-97	64.64	regulatory particle non-ATPase 13	[more]
AT2G26590.3	1.5e-97	64.64	regulatory particle non-ATPase 13	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038108	RPN13, DEUBAD domain superfamily	GENE3D	1.10.2020.20		coord: 168..263 e-value: 2.7E-19 score: 71.2
IPR044868	Rpn13/ADRM1, Pru domain	PFAM	PF04683	Proteasom_Rpn13	coord: 10..91 e-value: 1.1E-24 score: 86.8
IPR044868	Rpn13/ADRM1, Pru domain	PROSITE	PS51917	PRU	coord: 1..111 score: 51.929787
IPR038633	Proteasomal ubiquitin receptor Rpn13/ADRM1, Pru domain superfamily	GENE3D	2.30.29.70	Proteasomal ubiquitin receptor Rpn13/ADRM1	coord: 1..112 e-value: 1.2E-38 score: 133.6
IPR032368	RPN13, DEUBAD domain	PFAM	PF16550	RPN13_C	coord: 169..258 e-value: 3.2E-22 score: 78.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 263..291
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 269..291
None	No IPR available	CDD	cd13314	PH_Rpn13	coord: 5..108 e-value: 3.00957E-58 score: 180.158
IPR006773	Proteasomal ubiquitin receptor Rpn13/ADRM1	PANTHER	PTHR12225	ADHESION REGULATING MOLECULE 1 110 KDA CELL MEMBRANE GLYCOPROTEIN	coord: 2..269
IPR044867	DEUBAD domain	PROSITE	PS51916	DEUBAD	coord: 164..268 score: 12.834846

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS007087.1	MS007087.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus