MS007058 (gene) Bitter gourd (TR) v1

Overview


Name	MS007058
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	polyadenylate-binding protein RBP47B'
Location	scaffold430: 204468 .. 208439 (-)
RNA-Seq Expression	MS007058
Synteny	MS007058

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGACTCTGGCAGGCCAACCAGCGCACCATCAACCAACTACGGTCGAGGAAGTTCGTACACTTTGGATAGGGGATTTGCAGTACTGGGTCGATGAATCTTATCTCAGTTCTTGCTTCGCTCACACTGGCGAGGTTCGTTCGTTCGTTTCTTTTCCCCTTCTCGTTGTTGGCAATTGGAATTTCTTAAATTTGAATGCACTTTGGGTTACAGGATAATGTTCTAAAAATATACCCATTTGAATTCGTCAGTTTTTCAAGCTGATAGCATTTTTTTATCTGTTACCGAGAGTTGCGTAAGTGGATTTTAGAGGTTTCTACTTTTCGCTGATGTAGTGCAAAATATTTATTATCCGGTTCTGAAATTTCTTCGGGGTTTCGGAAGTGGATTTTATAAATGTGTTTGTATTTGCTCTATGCTACGAAAGCTGGATAATAGGGAGGGCCTCTCATATGGCCTTTCATACCACTGAATAGGGATGAGTTCAATGCTTGAGAGCCGTGGTAGTGGAAACGCCAATGTATAATTGTGGTTATTGTCGAGTAATTGTTATATTATAACGGCCCATTCAAATATATTCCTGGTGTCTGGTAGTTGTTATTTGTGTTATTGTATTTTAGTAAGAGCTAATAACTCTTAAGACGCATTTAGAAAGAGAGNTATAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTGACTATGCTATTTTTTTCTACAGGTAGTATCAATTAAAATTATTCGCAATAAGATCACTGGCCAGCCTGAGGGCTATGGGTTTGTGGAGTTTGTATCTCATGCAGCAGCAGAGAGAATTTTGCAGACTTACAATGGGACTCAGATGCCTGGAACTGAGCAAACTTTCAGGTTGAATTGGGCCTCTTTTGGAATTGGAGAAAGGCGTCCTGATGCTGGCCCTGAACACTCAATTTTTGTTGGGGATTTGGCTCCTGATGTTACAGATTATCTGTTGCAAGAGACCTTTAGAGCTCAATATCCATCTGTCAGGGGCGCTAAAGTTGTGACTGATCCAAACACAGGGCGTTCAAAGGGATATGGGTTTGTTAAATTTGCTGATGAAAATGAAAGGAATCGGGCTATGACAGAAATGAATGGTGTCTATTGCTCAACTAGACCTATGCGTATTAGTGCAGCAACACCCAAAAAGACCATTGGTGTTCAGCAGCAATATAATACTTTAGGTAAAGGTAATGAATATGCAGTATTGCCTTTTCTTTTCTTCATTTAATTATATATTATATGGATTAAAAAAGTTATTCAATGTAAAAAATATTTTCCACAAGCCTTGATGGGAGATGGTATCTGTCCAATTATGAATGAAATAGGATTTATTGCTACTATCATTACAACCTTTCCCTGGTTATGAGCAACTGGAAAGCGTTGATTTAGTCCTTGGGTAGGGTTCCCTCTACCACACCCCTTAAGGACGGGTTCCCTCTACCACACCCCTTAGGTTGTCTCCTTTTGCTTTGATGTTTAACATACAGAAGTCTCTTATCTAAAAAAAAGGGTATAGTAAAATCTTATGAGGAGACTGTTATTTACTATGTTTAAACTCGTACTTATTGTGTGCCTCTTGTCCCAGCAATGTACCCAGTTCCAGCCTATACTACACCAGTTCCCACGCTTCCGGCAGATTACGATTCGAATAACACAACTGTAAGTGATAGCATTACTCTTTCTGGTTGCTATGCTTATCTCTCACTACATTGTTCTTTATGCAGATCTTTGTTGGTAACTTGGATCCTAATATTACAGAGGAGGAGTTGAAGCAAACTTTTCTGCAGTTTGGGGAGATTGTTTATGTGAAAATTCCTGCAGGGAAAGGCTGTGGTTTTGTTCAGTTTGGGACGAGGTATGTTTTAGCATGTAGGTTAATTTTATTGCTGTGAATAAGATGGAAAGGAAGTGCGAGAAAAAAAATCTTGTGGGAGAATGGAAAATCTTGTGTATTTACATTTATCAAAGATATTTTTTCTACTTGTTAGTTCATTATGAACAATTGGACTTGGATTAAATATGTTCTCCTGATCGTGTCTGTGCAGGACATCGGCTGAAGAAGCTATTCAAAAGATGCAAGGAAAGATCATCGGTCAACAAGTGGTTCGTACTTCTTGGGGTAGAAATCCAGCTGCCAAGCAGGTAATTGACCTTCTATTGCAGTCCAGAACAAATATTTTACTTGATTTACTGAAAAGAACATTTTCCATTTGTGGATGTGATGTGTAATCATGTTGTTTATAATTAAATGCCTCGGTTAGACTTTATGAAACCTTGATTGTATAATGAGTTTGTGTAGTAAACTTTAGCGATATTGTTTTTTATATAGCCTGTGAAGTTGGAATTTCATCATTAGGGAAAAGAAAGGCTTATTATTGGTCATCATAGTAAATAATGTTCTTTTTCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATGAGAAAAAAAAATTTCATTGAGAATAATGAAAAAAGATACAAGAGCTACAAAAAAGCCTACAAAAGGGCATAAAAAAAAAGACCTGAAAGAGGAGGTCCCCTATAGAAAAGGACTCCAATCCAAAAGAATAAGGCCTAGAGAATAATTACAAAAGGGTTTAGAAACCGAGCCCCATAAAGAAGTGTTAAATCTAACGATGTCCCAAACATAGTCCACAGATTTCTTCACCGGTCCACCCCTAAACAATCTATGATTTCTTTCCAGCCAAATACCCTATAACATAGCTAGAAAGTCAGTCTACCATAAGAAGCAACCCCTGTAACAAAAATGGGGTTATAAAAGCACATCCTCCATCATGGCCCTACAATCCCTAGCACGGACCCAGGATACCCTAGTGCCTAGTATGAAAATAGGACTCTATAGAAATGGTCTAAGGACAAGGTATGTCCCCAGAAAACTATAGTAGACGCAATCTAAGAAACTGTACCAGACAAAAACATTTACAAAATTATTCCTTATGACATTTACCTAATCTATAACATCGAATATTCTACAGTGGCGAAATGGATTTTTTTTTCCAAAAAAGTAAAAAAGAAGAAAAGGATTTTAAATTTCCATGTGTTGTACTCCTTGGTAGAATTGGTAATTGCACGTTTATCTTTCTGATATTAAGCTCTCAAATTACCTGTGTAATGCTCTTCATAGTTAACCAGAGTTTACTGTATTGAATAGACTTTATGAAATGGCGATGAACTTTTAGGAATTGACTACTTGGGGTCAGCAAGTTGATCCGAACCAGTGGAGTGCTTACTATGGCTATGGAGGAGGTTATGATGCTTATGGATATGGAGTCGTACAAGATCCATCTTTATATGCTTATGGTGCATATTCGGGTTATGCCTCGTATCCTCAACAGGCAAGTTTTATTCTCTTTAGATATCTCTGTACAAGAGTTAATGTACGCTCTTCTGGTAGATAATGGGCAGAGTGATTGTTATTTTCTATTTGTTTGCAGCCATTTTCCAATGGGAGCATATTGGGTGAATTCTAATTGTTGTTTCAGGATGCTAAGGCTTAGAATCAGAGAATAAAATTAGTGGGAACGTGGAGCAATATAATTATAGAAAAAAGGTTAATCGTTTCAGAAGATTTGTTGCCTTCTCTGATCTTGGAACAATTTATTCGAACTATTTTCTCTCAGGTTGATGGTGTACAAGATTTAGCAGCTGTAGCTGGTGCTGTCCCTGCAGTGGAACATGGGGAGGAATGGAATGAAACCCTGGATACACCAGATGTTGAGTAGTAAGTTTCTTTATCTTTTGTCCCTCTAAAGATGCACCATTGGGAATTTACAAGTCTGTCATTTTTTGAACTTGAATTAACATCAAATCATAAATTTGGCAGTTTAAACGATGCATACCTCTCAAAACACGAAAGCGCCATTTTAGGCTGGCCCTTATGGTTAACCACCTCATCACTGGTTAGGCAAACA

mRNA sequence

ATGACGACTCTGGCAGGCCAACCAGCGCACCATCAACCAACTACGGTCGAGGAAGTTCGTACACTTTGGATAGGGGATTTGCAGTACTGGGTCGATGAATCTTATCTCAGTTCTTGCTTCGCTCACACTGGCGAGGTAGTATCAATTAAAATTATTCGCAATAAGATCACTGGCCAGCCTGAGGGCTATGGGTTTGTGGAGTTTGTATCTCATGCAGCAGCAGAGAGAATTTTGCAGACTTACAATGGGACTCAGATGCCTGGAACTGAGCAAACTTTCAGGTTGAATTGGGCCTCTTTTGGAATTGGAGAAAGGCGTCCTGATGCTGGCCCTGAACACTCAATTTTTGTTGGGGATTTGGCTCCTGATGTTACAGATTATCTGTTGCAAGAGACCTTTAGAGCTCAATATCCATCTGTCAGGGGCGCTAAAGTTGTGACTGATCCAAACACAGGGCGTTCAAAGGGATATGGGTTTGTTAAATTTGCTGATGAAAATGAAAGGAATCGGGCTATGACAGAAATGAATGGTGTCTATTGCTCAACTAGACCTATGCGTATTAGTGCAGCAACACCCAAAAAGACCATTGGTGTTCAGCAGCAATATAATACTTTAGGTAAAGCAATGTACCCAGTTCCAGCCTATACTACACCAGTTCCCACGCTTCCGGCAGATTACGATTCGAATAACACAACTATCTTTGTTGGTAACTTGGATCCTAATATTACAGAGGAGGAGTTGAAGCAAACTTTTCTGCAGTTTGGGGAGATTGTTTATGTGAAAATTCCTGCAGGGAAAGGCTGTGGTTTTGTTCAGTTTGGGACGAGGACATCGGCTGAAGAAGCTATTCAAAAGATGCAAGGAAAGATCATCGGTCAACAAGTGGTTCGTACTTCTTGGGGTAGAAATCCAGCTGCCAAGCAGGAATTGACTACTTGGGGTCAGCAAGTTGATCCGAACCAGTGGAGTGCTTACTATGGCTATGGAGGAGGTTATGATGCTTATGGATATGGAGTCGTACAAGATCCATCTTTATATGCTTATGGTGCATATTCGGGTTATGCCTCGTATCCTCAACAGGCAAGTTTTATTCTCTTTAGATATCTCTGTACAAGAGTTGATGGTGTACAAGATTTAGCAGCTGTAGCTGGTGCTGTCCCTGCAGTGGAACATGGGGAGGAATGGAATGAAACCCTGGATACACCAGATGTTGAGTATTTAAACGATGCATACCTCTCAAAACACGAAAGCGCCATTTTAGGCTGGCCCTTATGGTTAACCACCTCATCACTGGTTAGGCAAACA

Coding sequence (CDS)

ATGACGACTCTGGCAGGCCAACCAGCGCACCATCAACCAACTACGGTCGAGGAAGTTCGTACACTTTGGATAGGGGATTTGCAGTACTGGGTCGATGAATCTTATCTCAGTTCTTGCTTCGCTCACACTGGCGAGGTAGTATCAATTAAAATTATTCGCAATAAGATCACTGGCCAGCCTGAGGGCTATGGGTTTGTGGAGTTTGTATCTCATGCAGCAGCAGAGAGAATTTTGCAGACTTACAATGGGACTCAGATGCCTGGAACTGAGCAAACTTTCAGGTTGAATTGGGCCTCTTTTGGAATTGGAGAAAGGCGTCCTGATGCTGGCCCTGAACACTCAATTTTTGTTGGGGATTTGGCTCCTGATGTTACAGATTATCTGTTGCAAGAGACCTTTAGAGCTCAATATCCATCTGTCAGGGGCGCTAAAGTTGTGACTGATCCAAACACAGGGCGTTCAAAGGGATATGGGTTTGTTAAATTTGCTGATGAAAATGAAAGGAATCGGGCTATGACAGAAATGAATGGTGTCTATTGCTCAACTAGACCTATGCGTATTAGTGCAGCAACACCCAAAAAGACCATTGGTGTTCAGCAGCAATATAATACTTTAGGTAAAGCAATGTACCCAGTTCCAGCCTATACTACACCAGTTCCCACGCTTCCGGCAGATTACGATTCGAATAACACAACTATCTTTGTTGGTAACTTGGATCCTAATATTACAGAGGAGGAGTTGAAGCAAACTTTTCTGCAGTTTGGGGAGATTGTTTATGTGAAAATTCCTGCAGGGAAAGGCTGTGGTTTTGTTCAGTTTGGGACGAGGACATCGGCTGAAGAAGCTATTCAAAAGATGCAAGGAAAGATCATCGGTCAACAAGTGGTTCGTACTTCTTGGGGTAGAAATCCAGCTGCCAAGCAGGAATTGACTACTTGGGGTCAGCAAGTTGATCCGAACCAGTGGAGTGCTTACTATGGCTATGGAGGAGGTTATGATGCTTATGGATATGGAGTCGTACAAGATCCATCTTTATATGCTTATGGTGCATATTCGGGTTATGCCTCGTATCCTCAACAGGCAAGTTTTATTCTCTTTAGATATCTCTGTACAAGAGTTGATGGTGTACAAGATTTAGCAGCTGTAGCTGGTGCTGTCCCTGCAGTGGAACATGGGGAGGAATGGAATGAAACCCTGGATACACCAGATGTTGAGTATTTAAACGATGCATACCTCTCAAAACACGAAAGCGCCATTTTAGGCTGGCCCTTATGGTTAACCACCTCATCACTGGTTAGGCAAACA

Protein sequence

MTTLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVVSIKIIRNKITGQPEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVYCSTRPMRISAATPKKTIGVQQQYNTLGKAMYPVPAYTTPVPTLPADYDSNNTTIFVGNLDPNITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRTSAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQELTTWGQQVDPNQWSAYYGYGGGYDAYGYGVVQDPSLYAYGAYSGYASYPQQASFILFRYLCTRVDGVQDLAAVAGAVPAVEHGEEWNETLDTPDVEYLNDAYLSKHESAILGWPLWLTTSSLVRQT

Homology

[Close]

BLAST of MS007058 vs. NCBI nr
Match: XP_022154792.1 (polyadenylate-binding protein RBP47B' isoform X1 [Momordica charantia] >XP_022154793.1 polyadenylate-binding protein RBP47B' isoform X1 [Momordica charantia])

HSP 1 Score: 867.1 bits (2239), Expect = 6.5e-248
Identity = 423/435 (97.24%), Postives = 423/435 (97.24%), Query Frame = 0


Query: 1   MTTLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVVSIKIIRNKITGQP 60
           MTTLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVVSIKIIRNKITGQP
Sbjct: 1   MTTLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVVSIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYNTLGKAMYPVPAYTTPVPTLPADYDSNNTTIFVGNLDP 240
           STRPMRISAATPKKTIGVQQQYNTLGKAMYPVPAYTTPVPTLPADYDSNNTTIFVGNLDP
Sbjct: 181 STRPMRISAATPKKTIGVQQQYNTLGKAMYPVPAYTTPVPTLPADYDSNNTTIFVGNLDP 240

Query: 241 NITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRTSAEEAIQKMQGKIIGQQVVRTSW 300
           NITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRTSAEEAIQKMQGKIIGQQVVRTSW
Sbjct: 241 NITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRTSAEEAIQKMQGKIIGQQVVRTSW 300

Query: 301 GRNPAAKQELTTWGQQVDPNQWSAYYGYGGGYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360
           GRNPAAKQELTTWGQQVDPNQWSAYYGYGGGYDAYGYGVVQDPSLYAYGAYSGYASYPQQ
Sbjct: 301 GRNPAAKQELTTWGQQVDPNQWSAYYGYGGGYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360

Query: 361 ASFILFRYLCTRVDGVQDLAAVAGAVPAVEHGEEWNETLDTPDVEYLNDAYLSKHESAIL 420
                       VDGVQDLAAVAGAVPAVEHGEEWNETLDTPDVEYLNDAYLSKHESAIL
Sbjct: 361 ------------VDGVQDLAAVAGAVPAVEHGEEWNETLDTPDVEYLNDAYLSKHESAIL 420

Query: 421 GWPLWLTTSSLVRQT 436
           GWPLWLTTSSLVRQT
Sbjct: 421 GWPLWLTTSSLVRQT 423

[Close]

BLAST of MS007058 vs. NCBI nr
Match: XP_022154794.1 (polyadenylate-binding protein RBP47B' isoform X2 [Momordica charantia])

HSP 1 Score: 857.8 bits (2215), Expect = 4.0e-245
Identity = 421/435 (96.78%), Postives = 421/435 (96.78%), Query Frame = 0


Query: 1   MTTLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVVSIKIIRNKITGQP 60
           MTTLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVVSIKIIRNKITGQP
Sbjct: 1   MTTLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVVSIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYNTLGKAMYPVPAYTTPVPTLPADYDSNNTTIFVGNLDP 240
           STRPMRISAATPKKTIGVQQQYNTL  AMYPVPAYTTPVPTLPADYDSNNTTIFVGNLDP
Sbjct: 181 STRPMRISAATPKKTIGVQQQYNTL--AMYPVPAYTTPVPTLPADYDSNNTTIFVGNLDP 240

Query: 241 NITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRTSAEEAIQKMQGKIIGQQVVRTSW 300
           NITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRTSAEEAIQKMQGKIIGQQVVRTSW
Sbjct: 241 NITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRTSAEEAIQKMQGKIIGQQVVRTSW 300

Query: 301 GRNPAAKQELTTWGQQVDPNQWSAYYGYGGGYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360
           GRNPAAKQELTTWGQQVDPNQWSAYYGYGGGYDAYGYGVVQDPSLYAYGAYSGYASYPQQ
Sbjct: 301 GRNPAAKQELTTWGQQVDPNQWSAYYGYGGGYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360

Query: 361 ASFILFRYLCTRVDGVQDLAAVAGAVPAVEHGEEWNETLDTPDVEYLNDAYLSKHESAIL 420
                       VDGVQDLAAVAGAVPAVEHGEEWNETLDTPDVEYLNDAYLSKHESAIL
Sbjct: 361 ------------VDGVQDLAAVAGAVPAVEHGEEWNETLDTPDVEYLNDAYLSKHESAIL 420

Query: 421 GWPLWLTTSSLVRQT 436
           GWPLWLTTSSLVRQT
Sbjct: 421 GWPLWLTTSSLVRQT 421

[Close]

BLAST of MS007058 vs. NCBI nr
Match: XP_008437079.1 (PREDICTED: polyadenylate-binding protein RBP47B' isoform X3 [Cucumis melo])

HSP 1 Score: 828.2 bits (2138), Expect = 3.4e-236
Identity = 403/435 (92.64%), Postives = 412/435 (94.71%), Query Frame = 0


Query: 1   MTTLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVVSIKIIRNKITGQP 60
           M TLAGQP HHQPTTVEEVRTLWIGDLQYWVDESYL+SCFAHTGEV+SIKIIRNKITGQP
Sbjct: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAM+EMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYNTLGKAMYPVPAYTTPVPTLPADYDSNNTTIFVGNLDP 240
           STRPMRISAATPKKTIGVQQQY +LGKAMYPVPAYTT VP LPADYD+NNTTIFVGNLDP
Sbjct: 181 STRPMRISAATPKKTIGVQQQY-SLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDP 240

Query: 241 NITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRTSAEEAIQKMQGKIIGQQVVRTSW 300
           NITEEELKQTFLQFGEI YVKIPAGKGCGFVQFGTR SAEEAIQKMQGKIIGQQVVRTSW
Sbjct: 241 NITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSW 300

Query: 301 GRNPAAKQELTTWGQQVDPNQWSAYYGYGGGYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360
           GRNPAAKQ+L TWGQQVDPNQWSAYYGYGG YDAYGYGVVQDPSLYAYGAYSGYASYPQQ
Sbjct: 301 GRNPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360

Query: 361 ASFILFRYLCTRVDGVQDLAAVAGAVPAVEHGEEWNETLDTPDVEYLNDAYLSKHESAIL 420
                       VDGVQDLA VAGAVP+VE GEEWN+TLDTPDV+YLNDAYLSKHESAIL
Sbjct: 361 ------------VDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAIL 420

Query: 421 GWPLWLTTSSLVRQT 436
           GWPLWLTTSSLVRQT
Sbjct: 421 GWPLWLTTSSLVRQT 422

[Close]

BLAST of MS007058 vs. NCBI nr
Match: XP_022969897.1 (polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita maxima] >XP_022969898.1 polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 827.4 bits (2136), Expect = 5.7e-236
Identity = 404/435 (92.87%), Postives = 411/435 (94.48%), Query Frame = 0


Query: 1   MTTLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVVSIKIIRNKITGQP 60
           M TLA QP HHQPT+VEEVRTLWIGDLQYWVDESYLSSCFAHTGEV+SIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAM+EMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYNTLGKAMYPVPAYTTPVPTLPADYDSNNTTIFVGNLDP 240
           STRPMRISAATPKKTIGVQQQY T GKAMYPVPAYTTPVP LPADYD+NNTTIFVGNLDP
Sbjct: 181 STRPMRISAATPKKTIGVQQQY-TPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDP 240

Query: 241 NITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRTSAEEAIQKMQGKIIGQQVVRTSW 300
           NITEEELKQTFLQFGEI YVKIPAG+GCGFVQFGTR SAEEAIQKMQGKIIGQQVVRTSW
Sbjct: 241 NITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSW 300

Query: 301 GRNPAAKQELTTWGQQVDPNQWSAYYGYGGGYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360
           GRNPAAKQ+L TWGQQVDPNQWSAYYGYGG YDAYGYGVVQDPSLYAYGAYSGYASYPQQ
Sbjct: 301 GRNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360

Query: 361 ASFILFRYLCTRVDGVQDLAAVAGAVPAVEHGEEWNETLDTPDVEYLNDAYLSKHESAIL 420
                       VDGVQDLAAVAGAVPAVE GEEWN+TLDTPDVE LNDAYLSKHESAIL
Sbjct: 361 ------------VDGVQDLAAVAGAVPAVEQGEEWNDTLDTPDVECLNDAYLSKHESAIL 420

Query: 421 GWPLWLTTSSLVRQT 436
           GWPLWLTTSSLVRQT
Sbjct: 421 GWPLWLTTSSLVRQT 422

[Close]

BLAST of MS007058 vs. NCBI nr
Match: XP_022922187.1 (polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita moschata] >XP_022922188.1 polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 826.2 bits (2133), Expect = 1.3e-235
Identity = 403/435 (92.64%), Postives = 411/435 (94.48%), Query Frame = 0


Query: 1   MTTLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVVSIKIIRNKITGQP 60
           M TLA QP HHQPT+VEEVRTLWIGDLQYWVDESYLSSCFAHTGEV+SIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAM+EMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYNTLGKAMYPVPAYTTPVPTLPADYDSNNTTIFVGNLDP 240
           STRPMRISAATPKKTIGVQQQY T GKAMYPVPAYTTPVP LPADYD+NNTTIFVGNLDP
Sbjct: 181 STRPMRISAATPKKTIGVQQQY-TPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDP 240

Query: 241 NITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRTSAEEAIQKMQGKIIGQQVVRTSW 300
           NITEEELKQTFLQFGEI YVKIPAG+GCGFVQFGTR SAEEAIQKMQGKIIGQQVVRTSW
Sbjct: 241 NITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSW 300

Query: 301 GRNPAAKQELTTWGQQVDPNQWSAYYGYGGGYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360
           GRNPAAKQ+L TWGQQVDPNQWSAYYGYGG YDAYGYGVVQDPSLYAYGAYSGYASYPQQ
Sbjct: 301 GRNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360

Query: 361 ASFILFRYLCTRVDGVQDLAAVAGAVPAVEHGEEWNETLDTPDVEYLNDAYLSKHESAIL 420
                       VDGVQDLAAVAGAVPA+E GEEWN+TLDTPDVE LNDAYLSKHESAIL
Sbjct: 361 ------------VDGVQDLAAVAGAVPALEQGEEWNDTLDTPDVECLNDAYLSKHESAIL 420

Query: 421 GWPLWLTTSSLVRQT 436
           GWPLWLTTSSLVRQT
Sbjct: 421 GWPLWLTTSSLVRQT 422

[Close]

BLAST of MS007058 vs. ExPASy Swiss-Prot
Match: Q8VXZ9 (Polyadenylate-binding protein RBP47B' OS=Arabidopsis thaliana OX=3702 GN=RBP47B' PE=2 SV=1)

HSP 1 Score: 568.2 bits (1463), Expect = 8.2e-161
Identity = 291/434 (67.05%), Postives = 332/434 (76.50%), Query Frame = 0


Query: 7   QPAHHQPTTVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVVSIKIIRNKITGQPEGYGFV 66
           Q ++H P T+EEVRTLWIGDLQYWVDE+YL+SCF+ TGE+VS+K+IRNKITGQPEGYGF+
Sbjct: 11  QGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFI 70

Query: 67  EFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTD 126
           EF+SHAAAER LQTYNGTQMPGTE TFRLNWASFG G+ + DAGP+HSIFVGDLAPDVTD
Sbjct: 71  EFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQ-KVDAGPDHSIFVGDLAPDVTD 130

Query: 127 YLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVYCSTRPMR 186
           YLLQETFR  Y SVRGAKVVTDP+TGRSKGYGFVKFA+E+ERNRAM EMNG+YCSTRPMR
Sbjct: 131 YLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMR 190

Query: 187 ISAATPKKTIGVQQQYNTLGKAMYPV---PAYTTPVP--TLPADYDSNNTTIFVGNLDPN 246
           ISAATPKK +GVQQQY T  KA+YPV    A   PV     P + D   TTI V NLD N
Sbjct: 191 ISAATPKKNVGVQQQYVT--KAVYPVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQN 250

Query: 247 ITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRTSAEEAIQKMQGKIIGQQVVRTSWG 306
           +TEEELK+ F Q GE++YVKIPA KG G+VQF TR SAEEA+Q+MQG++IGQQ VR SW 
Sbjct: 251 VTEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWS 310

Query: 307 RNPAAKQELTTWGQQVDPNQWSAYYGYGGGYDAYGYGVVQDPSLYAYGAYSGYASYPQQA 366
           +NP        W  Q DPNQW+ YYGYG GYDAY YG  QDPS+YAYG Y GY  YPQQ 
Sbjct: 311 KNPGQ----DGWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVYAYGGY-GYPQYPQQG 370

Query: 367 SFILFRYLCTRVDGVQDLA-AVAGAVPAVEHGEEWNETLDTPDVEYLNDAYLSKHESAIL 426
                       +G QD++ + AG V   E  +E  + L TPDV+ LN AYLS H SAIL
Sbjct: 371 ------------EGTQDISNSAAGGVAGAE--QELYDPLATPDVDKLNAAYLSVHASAIL 422

Query: 427 GWPLWLTTSSLVRQ 435
           G P+W  TSSL  Q
Sbjct: 431 GRPMWQRTSSLTSQ 422

[Close]

BLAST of MS007058 vs. ExPASy Swiss-Prot
Match: Q9LEB4 (Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP45 PE=1 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 8.6e-118
Identity = 220/344 (63.95%), Postives = 255/344 (74.13%), Query Frame = 0


Query: 18  EVRTLWIGDLQYWVDESYLSSCFAHTGEVVSIKIIRNKITGQPEGYGFVEFVSHAAAERI 77
           EVR+LWIGDLQYW+DE+YLS+CF HTGE+VS K+IRNK TGQ EGYGF+EF SHAAAE I
Sbjct: 82  EVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIRNKQTGQSEGYGFLEFRSHAAAETI 141

Query: 78  LQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQY 137
           LQTYNGT MP  EQ FR+NWAS G GERR D+  EH+IFVGDLA DVTDY+LQETF++ Y
Sbjct: 142 LQTYNGTLMPNVEQNFRMNWASLGAGERRDDSA-EHTIFVGDLAADVTDYILQETFKSVY 201

Query: 138 PSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVYCSTRPMRISAATPKKTIG 197
            SVRGAKVVTD  TGRSKGYGFVKFADE+E+ RAMTEMNGV CSTRPMRI  A  KK +G
Sbjct: 202 SSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMTEMNGVLCSTRPMRIGPAANKKPVG 261

Query: 198 VQQQYNTLGKAMYPVPAYTTPVPTLPADYDSNNTTIFVGNLDPNITEEELKQTFLQFGEI 257
             Q      KA Y  P  T        + D NNTTIFVG LDP + EE L+Q F  +GE+
Sbjct: 262 TPQ------KATYQNPQAT------QGESDPNNTTIFVGGLDPTVAEEHLRQVFSPYGEL 321

Query: 258 VYVKIPAGKGCGFVQFGTRTSAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQ-ELTTWGQQ 317
           V+VKI AGK CGFVQFGTR SAE+A+  + G  +G Q +R SWGR+P++KQ + T WG  
Sbjct: 322 VHVKIVAGKRCGFVQFGTRASAEQALSSLNGTQLGGQSIRLSWGRSPSSKQTDQTQWG-- 381

Query: 318 VDPNQWSAYYGYGGGYDAYGYG-VVQDPSLYAYGAYSGYASYPQ 360
                  AYYGYG GY+AYGY    QDP++Y YG Y GYA+Y Q
Sbjct: 382 ---GSGGAYYGYGQGYEAYGYAPPAQDPNMY-YGNYPGYANYQQ 406

[Close]

BLAST of MS007058 vs. ExPASy Swiss-Prot
Match: Q9LEB3 (Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP47 PE=1 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 1.3e-110
Identity = 209/359 (58.22%), Postives = 257/359 (71.59%), Query Frame = 0


Query: 7   QPAHHQPTTV----EEVRTLWIGDLQYWVDESYLSSCFAHTGEVVSIKIIRNKITGQPEG 66
           Q     PT +    E+ +T+WIGDLQ W+DESYL SCF+  GEV+S+KIIRNK TGQ E 
Sbjct: 67  QKMQQSPTQIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSER 126

Query: 67  YGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAP 126
           YGFVEF +HAAAE++LQ+YNGT MP TEQ FRLNWA F  GE+R + G + SIFVGDLA 
Sbjct: 127 YGFVEFNTHAAAEKVLQSYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLAS 186

Query: 127 DVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVYCST 186
           DVTD +L++TF ++YPS++GAKVV D NTG SKGYGFV+F DE+ER+RAMTEMNGVYCS+
Sbjct: 187 DVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSS 246

Query: 187 RPMRISAATPKKTIGVQQQYNTLGKAMYPVPAYTT---PVPTLPADYDSNNTTIFVGNLD 246
           R MRI  ATPKK     +QY++  +A+     Y +         +D DS+NTTIFVG LD
Sbjct: 247 RAMRIGVATPKKP-SAHEQYSS--QAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLD 306

Query: 247 PNITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRTSAEEAIQKMQGKIIGQQVVRTS 306
             +T+EEL+Q+F QFGE+V VKIPAGKGCGFVQF  R+SA+EAIQK+ G IIG+Q VR S
Sbjct: 307 SEVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLS 366

Query: 307 WGRNPAAKQELTTWGQQVDPNQWSAYYGYGGGYDAYGYGVV--QDPSLYAYGAYSGYAS 357
           WGR+PA KQ  T  G     +QW+  Y     Y  YGYG    QD  +YA GA  G +S
Sbjct: 367 WGRSPANKQMRTDSG-----SQWNGGYNGRQNYGGYGYGASQNQDSGMYATGAAYGASS 417

[Close]

BLAST of MS007058 vs. ExPASy Swiss-Prot
Match: Q0J9Y2 (RNA-binding protein L OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-L PE=1 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 1.3e-110
Identity = 210/356 (58.99%), Postives = 250/356 (70.22%), Query Frame = 0


Query: 13  PTTVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVVSIKIIRNKITGQPEGYGFVEFVSHA 72
           P   +EV+TLWIGDLQ W+DESY+ +CFA TGEV S+K+IR+K +GQ +GYGFVEF S A
Sbjct: 83  PAAADEVKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRA 142

Query: 73  AAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQET 132
           AA+RILQTYNG  MP  E  FRLNWAS   GE+R D  P+++IFVGDLA DVTDYLLQET
Sbjct: 143 AADRILQTYNGQMMPNVEMVFRLNWAS--AGEKRDDT-PDYTIFVGDLAADVTDYLLQET 202

Query: 133 FRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVYCSTRPMRISAATP 192
           FR  YPSV+GAKVVTD  T RSKGYGFVKF D  E+ RAMTEMNG+ CS+RPMRI  A  
Sbjct: 203 FRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAAN 262

Query: 193 KKTIGVQQQYNTLGKAMYPVPAYTTPVPTLPADYDSNNTTIFVGNLDPNITEEELKQTFL 252
           KKT GVQ++      A               ++ D NNTTIFVG LDPN+TE+ LKQ F 
Sbjct: 263 KKTTGVQERVPNAQGAQ--------------SENDPNNTTIFVGGLDPNVTEDVLKQVFA 322

Query: 253 QFGEIVYVKIPAGKGCGFVQFGTRTSAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQELTT 312
            +GE+V+VKIP GK CGFVQ+  R SAE+A+  +QG +IG Q VR SWGR+ + KQ    
Sbjct: 323 PYGEVVHVKIPVGKRCGFVQYVNRPSAEQALAVLQGTLIGGQNVRLSWGRSLSNKQ---- 382

Query: 313 WGQQVDPNQWSA-------YYGYGGGYDAY-GYGVVQDPSLYAYGAYSGYASYPQQ 361
              Q D NQW A       Y GYG GY+AY GY   QDP++Y YGAY+GY +Y QQ
Sbjct: 383 --PQHDSNQWGAGAGAGGYYGGYGQGYEAYGGYAQPQDPNMYGYGAYAGYPNYQQQ 415

[Close]

BLAST of MS007058 vs. ExPASy Swiss-Prot
Match: Q9SAB3 (Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B PE=1 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 1.4e-107
Identity = 200/350 (57.14%), Postives = 250/350 (71.43%), Query Frame = 0


Query: 5   AGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVVSIKIIRNKITGQPEGYG 64
           A  P   QPTT +E+RTLWIGDLQYW+DE++L  CFAHTGE+VS K+IRNK TGQ EGYG
Sbjct: 47  AAAPPSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYG 106

Query: 65  FVEFVSHAAAERILQTYNGTQMPG-TEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPD 124
           F+EF SHAAAER+LQT+N   +P   +Q FRLNWAS   G++R D+ P+++IFVGDLA D
Sbjct: 107 FIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDS-PDYTIFVGDLAAD 166

Query: 125 VTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVYCSTR 184
           VTDY+L ETFRA YPSV+GAKVV D  TGR+KGYGFV+F+DE+E+ RAMTEMNGV CSTR
Sbjct: 167 VTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTR 226

Query: 185 PMRISAATPKKTIGVQQQYNTLGKAMYPVPAYTTPVPTLPADYDSNNTTIFVGNLDPNIT 244
           PMRI  A  KK +  Q+             +Y +    +  D D NNTT+FVG LD ++T
Sbjct: 227 PMRIGPAASKKGVTGQRD------------SYQSSAAGVTTDNDPNNTTVFVGGLDASVT 286

Query: 245 EEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRTSAEEAIQKMQGKIIGQQVVRTSWGRN 304
           ++ LK  F Q+GEIV+VKIPAGK CGFVQF  ++ AEEA++ + G  +G   VR SWGR+
Sbjct: 287 DDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRS 346

Query: 305 PAAKQELTTWGQQVDPNQWSAYYGYGGGYDAYGYGVVQDPSLYAYGAYSG 354
           P+ K       Q  DP+Q+  Y GYG G + YGY + QDP+ Y YG YSG
Sbjct: 347 PSNK-------QSGDPSQF-YYGGYGQGQEQYGYTMPQDPNAY-YGGYSG 374

[Close]

BLAST of MS007058 vs. ExPASy TrEMBL
Match: A0A6J1DLA1 (polyadenylate-binding protein RBP47B' isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021961 PE=4 SV=1)

HSP 1 Score: 867.1 bits (2239), Expect = 3.2e-248
Identity = 423/435 (97.24%), Postives = 423/435 (97.24%), Query Frame = 0


Query: 1   MTTLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVVSIKIIRNKITGQP 60
           MTTLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVVSIKIIRNKITGQP
Sbjct: 1   MTTLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVVSIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYNTLGKAMYPVPAYTTPVPTLPADYDSNNTTIFVGNLDP 240
           STRPMRISAATPKKTIGVQQQYNTLGKAMYPVPAYTTPVPTLPADYDSNNTTIFVGNLDP
Sbjct: 181 STRPMRISAATPKKTIGVQQQYNTLGKAMYPVPAYTTPVPTLPADYDSNNTTIFVGNLDP 240

Query: 241 NITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRTSAEEAIQKMQGKIIGQQVVRTSW 300
           NITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRTSAEEAIQKMQGKIIGQQVVRTSW
Sbjct: 241 NITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRTSAEEAIQKMQGKIIGQQVVRTSW 300

Query: 301 GRNPAAKQELTTWGQQVDPNQWSAYYGYGGGYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360
           GRNPAAKQELTTWGQQVDPNQWSAYYGYGGGYDAYGYGVVQDPSLYAYGAYSGYASYPQQ
Sbjct: 301 GRNPAAKQELTTWGQQVDPNQWSAYYGYGGGYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360

Query: 361 ASFILFRYLCTRVDGVQDLAAVAGAVPAVEHGEEWNETLDTPDVEYLNDAYLSKHESAIL 420
                       VDGVQDLAAVAGAVPAVEHGEEWNETLDTPDVEYLNDAYLSKHESAIL
Sbjct: 361 ------------VDGVQDLAAVAGAVPAVEHGEEWNETLDTPDVEYLNDAYLSKHESAIL 420

Query: 421 GWPLWLTTSSLVRQT 436
           GWPLWLTTSSLVRQT
Sbjct: 421 GWPLWLTTSSLVRQT 423

[Close]

BLAST of MS007058 vs. ExPASy TrEMBL
Match: A0A6J1DN83 (polyadenylate-binding protein RBP47B' isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021961 PE=4 SV=1)

HSP 1 Score: 857.8 bits (2215), Expect = 1.9e-245
Identity = 421/435 (96.78%), Postives = 421/435 (96.78%), Query Frame = 0


Query: 1   MTTLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVVSIKIIRNKITGQP 60
           MTTLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVVSIKIIRNKITGQP
Sbjct: 1   MTTLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVVSIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYNTLGKAMYPVPAYTTPVPTLPADYDSNNTTIFVGNLDP 240
           STRPMRISAATPKKTIGVQQQYNTL  AMYPVPAYTTPVPTLPADYDSNNTTIFVGNLDP
Sbjct: 181 STRPMRISAATPKKTIGVQQQYNTL--AMYPVPAYTTPVPTLPADYDSNNTTIFVGNLDP 240

Query: 241 NITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRTSAEEAIQKMQGKIIGQQVVRTSW 300
           NITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRTSAEEAIQKMQGKIIGQQVVRTSW
Sbjct: 241 NITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRTSAEEAIQKMQGKIIGQQVVRTSW 300

Query: 301 GRNPAAKQELTTWGQQVDPNQWSAYYGYGGGYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360
           GRNPAAKQELTTWGQQVDPNQWSAYYGYGGGYDAYGYGVVQDPSLYAYGAYSGYASYPQQ
Sbjct: 301 GRNPAAKQELTTWGQQVDPNQWSAYYGYGGGYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360

Query: 361 ASFILFRYLCTRVDGVQDLAAVAGAVPAVEHGEEWNETLDTPDVEYLNDAYLSKHESAIL 420
                       VDGVQDLAAVAGAVPAVEHGEEWNETLDTPDVEYLNDAYLSKHESAIL
Sbjct: 361 ------------VDGVQDLAAVAGAVPAVEHGEEWNETLDTPDVEYLNDAYLSKHESAIL 420

Query: 421 GWPLWLTTSSLVRQT 436
           GWPLWLTTSSLVRQT
Sbjct: 421 GWPLWLTTSSLVRQT 421

[Close]

BLAST of MS007058 vs. ExPASy TrEMBL
Match: A0A1S3ATQ6 (polyadenylate-binding protein RBP47B' isoform X3 OS=Cucumis melo OX=3656 GN=LOC103482609 PE=4 SV=1)

HSP 1 Score: 828.2 bits (2138), Expect = 1.6e-236
Identity = 403/435 (92.64%), Postives = 412/435 (94.71%), Query Frame = 0


Query: 1   MTTLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVVSIKIIRNKITGQP 60
           M TLAGQP HHQPTTVEEVRTLWIGDLQYWVDESYL+SCFAHTGEV+SIKIIRNKITGQP
Sbjct: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAM+EMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYNTLGKAMYPVPAYTTPVPTLPADYDSNNTTIFVGNLDP 240
           STRPMRISAATPKKTIGVQQQY +LGKAMYPVPAYTT VP LPADYD+NNTTIFVGNLDP
Sbjct: 181 STRPMRISAATPKKTIGVQQQY-SLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDP 240

Query: 241 NITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRTSAEEAIQKMQGKIIGQQVVRTSW 300
           NITEEELKQTFLQFGEI YVKIPAGKGCGFVQFGTR SAEEAIQKMQGKIIGQQVVRTSW
Sbjct: 241 NITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSW 300

Query: 301 GRNPAAKQELTTWGQQVDPNQWSAYYGYGGGYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360
           GRNPAAKQ+L TWGQQVDPNQWSAYYGYGG YDAYGYGVVQDPSLYAYGAYSGYASYPQQ
Sbjct: 301 GRNPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360

Query: 361 ASFILFRYLCTRVDGVQDLAAVAGAVPAVEHGEEWNETLDTPDVEYLNDAYLSKHESAIL 420
                       VDGVQDLA VAGAVP+VE GEEWN+TLDTPDV+YLNDAYLSKHESAIL
Sbjct: 361 ------------VDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAIL 420

Query: 421 GWPLWLTTSSLVRQT 436
           GWPLWLTTSSLVRQT
Sbjct: 421 GWPLWLTTSSLVRQT 422

[Close]

BLAST of MS007058 vs. ExPASy TrEMBL
Match: A0A6J1HXL5 (polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468959 PE=4 SV=1)

HSP 1 Score: 827.4 bits (2136), Expect = 2.8e-236
Identity = 404/435 (92.87%), Postives = 411/435 (94.48%), Query Frame = 0


Query: 1   MTTLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVVSIKIIRNKITGQP 60
           M TLA QP HHQPT+VEEVRTLWIGDLQYWVDESYLSSCFAHTGEV+SIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAM+EMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYNTLGKAMYPVPAYTTPVPTLPADYDSNNTTIFVGNLDP 240
           STRPMRISAATPKKTIGVQQQY T GKAMYPVPAYTTPVP LPADYD+NNTTIFVGNLDP
Sbjct: 181 STRPMRISAATPKKTIGVQQQY-TPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDP 240

Query: 241 NITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRTSAEEAIQKMQGKIIGQQVVRTSW 300
           NITEEELKQTFLQFGEI YVKIPAG+GCGFVQFGTR SAEEAIQKMQGKIIGQQVVRTSW
Sbjct: 241 NITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSW 300

Query: 301 GRNPAAKQELTTWGQQVDPNQWSAYYGYGGGYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360
           GRNPAAKQ+L TWGQQVDPNQWSAYYGYGG YDAYGYGVVQDPSLYAYGAYSGYASYPQQ
Sbjct: 301 GRNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360

Query: 361 ASFILFRYLCTRVDGVQDLAAVAGAVPAVEHGEEWNETLDTPDVEYLNDAYLSKHESAIL 420
                       VDGVQDLAAVAGAVPAVE GEEWN+TLDTPDVE LNDAYLSKHESAIL
Sbjct: 361 ------------VDGVQDLAAVAGAVPAVEQGEEWNDTLDTPDVECLNDAYLSKHESAIL 420

Query: 421 GWPLWLTTSSLVRQT 436
           GWPLWLTTSSLVRQT
Sbjct: 421 GWPLWLTTSSLVRQT 422

[Close]

BLAST of MS007058 vs. ExPASy TrEMBL
Match: A0A6J1E2I3 (polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430253 PE=4 SV=1)

HSP 1 Score: 826.2 bits (2133), Expect = 6.2e-236
Identity = 403/435 (92.64%), Postives = 411/435 (94.48%), Query Frame = 0


Query: 1   MTTLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVVSIKIIRNKITGQP 60
           M TLA QP HHQPT+VEEVRTLWIGDLQYWVDESYLSSCFAHTGEV+SIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAM+EMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYNTLGKAMYPVPAYTTPVPTLPADYDSNNTTIFVGNLDP 240
           STRPMRISAATPKKTIGVQQQY T GKAMYPVPAYTTPVP LPADYD+NNTTIFVGNLDP
Sbjct: 181 STRPMRISAATPKKTIGVQQQY-TPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDP 240

Query: 241 NITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRTSAEEAIQKMQGKIIGQQVVRTSW 300
           NITEEELKQTFLQFGEI YVKIPAG+GCGFVQFGTR SAEEAIQKMQGKIIGQQVVRTSW
Sbjct: 241 NITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSW 300

Query: 301 GRNPAAKQELTTWGQQVDPNQWSAYYGYGGGYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360
           GRNPAAKQ+L TWGQQVDPNQWSAYYGYGG YDAYGYGVVQDPSLYAYGAYSGYASYPQQ
Sbjct: 301 GRNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360

Query: 361 ASFILFRYLCTRVDGVQDLAAVAGAVPAVEHGEEWNETLDTPDVEYLNDAYLSKHESAIL 420
                       VDGVQDLAAVAGAVPA+E GEEWN+TLDTPDVE LNDAYLSKHESAIL
Sbjct: 361 ------------VDGVQDLAAVAGAVPALEQGEEWNDTLDTPDVECLNDAYLSKHESAIL 420

Query: 421 GWPLWLTTSSLVRQT 436
           GWPLWLTTSSLVRQT
Sbjct: 421 GWPLWLTTSSLVRQT 422

[Close]

BLAST of MS007058 vs. TAIR 10
Match: AT5G19350.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 568.2 bits (1463), Expect = 5.9e-162
Identity = 291/434 (67.05%), Postives = 332/434 (76.50%), Query Frame = 0


Query: 7   QPAHHQPTTVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVVSIKIIRNKITGQPEGYGFV 66
           Q ++H P T+EEVRTLWIGDLQYWVDE+YL+SCF+ TGE+VS+K+IRNKITGQPEGYGF+
Sbjct: 11  QGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFI 70

Query: 67  EFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTD 126
           EF+SHAAAER LQTYNGTQMPGTE TFRLNWASFG G+ + DAGP+HSIFVGDLAPDVTD
Sbjct: 71  EFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQ-KVDAGPDHSIFVGDLAPDVTD 130

Query: 127 YLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVYCSTRPMR 186
           YLLQETFR  Y SVRGAKVVTDP+TGRSKGYGFVKFA+E+ERNRAM EMNG+YCSTRPMR
Sbjct: 131 YLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMR 190

Query: 187 ISAATPKKTIGVQQQYNTLGKAMYPV---PAYTTPVP--TLPADYDSNNTTIFVGNLDPN 246
           ISAATPKK +GVQQQY T  KA+YPV    A   PV     P + D   TTI V NLD N
Sbjct: 191 ISAATPKKNVGVQQQYVT--KAVYPVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQN 250

Query: 247 ITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRTSAEEAIQKMQGKIIGQQVVRTSWG 306
           +TEEELK+ F Q GE++YVKIPA KG G+VQF TR SAEEA+Q+MQG++IGQQ VR SW 
Sbjct: 251 VTEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWS 310

Query: 307 RNPAAKQELTTWGQQVDPNQWSAYYGYGGGYDAYGYGVVQDPSLYAYGAYSGYASYPQQA 366
           +NP        W  Q DPNQW+ YYGYG GYDAY YG  QDPS+YAYG Y GY  YPQQ 
Sbjct: 311 KNPGQ----DGWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVYAYGGY-GYPQYPQQG 370

Query: 367 SFILFRYLCTRVDGVQDLA-AVAGAVPAVEHGEEWNETLDTPDVEYLNDAYLSKHESAIL 426
                       +G QD++ + AG V   E  +E  + L TPDV+ LN AYLS H SAIL
Sbjct: 371 ------------EGTQDISNSAAGGVAGAE--QELYDPLATPDVDKLNAAYLSVHASAIL 422

Query: 427 GWPLWLTTSSLVRQ 435
           G P+W  TSSL  Q
Sbjct: 431 GRPMWQRTSSLTSQ 422

[Close]

BLAST of MS007058 vs. TAIR 10
Match: AT5G19350.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 562.8 bits (1449), Expect = 2.5e-160
Identity = 287/433 (66.28%), Postives = 327/433 (75.52%), Query Frame = 0


Query: 7   QPAHHQPTTVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVVSIKIIRNKITGQPEGYGFV 66
           Q ++H P T+EEVRTLWIGDLQYWVDE+YL+SCF+ TGE+VS+K+IRNKITGQPEGYGF+
Sbjct: 11  QGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFI 70

Query: 67  EFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTD 126
           EF+SHAAAER LQTYNGTQMPGTE TFRLNWASFG G+ + DAGP+HSIFVGDLAPDVTD
Sbjct: 71  EFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQ-KVDAGPDHSIFVGDLAPDVTD 130

Query: 127 YLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVYCSTRPMR 186
           YLLQETFR  Y SVRGAKVVTDP+TGRSKGYGFVKFA+E+ERNRAM EMNG+YCSTRPMR
Sbjct: 131 YLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMR 190

Query: 187 ISAATPKKTIGVQQQYNTL----GKAMYPVPAYTTPVPTLPADYDSNNTTIFVGNLDPNI 246
           ISAATPKK +GVQQQY T          PV AY       P + D   TTI V NLD N+
Sbjct: 191 ISAATPKKNVGVQQQYVTKVTVPSAVAAPVQAYVA-----PPESDVTCTTISVANLDQNV 250

Query: 247 TEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRTSAEEAIQKMQGKIIGQQVVRTSWGR 306
           TEEELK+ F Q GE++YVKIPA KG G+VQF TR SAEEA+Q+MQG++IGQQ VR SW +
Sbjct: 251 TEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSK 310

Query: 307 NPAAKQELTTWGQQVDPNQWSAYYGYGGGYDAYGYGVVQDPSLYAYGAYSGYASYPQQAS 366
           NP        W  Q DPNQW+ YYGYG GYDAY YG  QDPS+YAYG Y GY  YPQQ  
Sbjct: 311 NPGQ----DGWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVYAYGGY-GYPQYPQQG- 370

Query: 367 FILFRYLCTRVDGVQDLA-AVAGAVPAVEHGEEWNETLDTPDVEYLNDAYLSKHESAILG 426
                      +G QD++ + AG V   E  +E  + L TPDV+ LN AYLS H SAILG
Sbjct: 371 -----------EGTQDISNSAAGGVAGAE--QELYDPLATPDVDKLNAAYLSVHASAILG 418

Query: 427 WPLWLTTSSLVRQ 435
            P+W  TSSL  Q
Sbjct: 431 RPMWQRTSSLTSQ 418

[Close]

BLAST of MS007058 vs. TAIR 10
Match: AT1G11650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 391.3 bits (1004), Expect = 9.8e-109
Identity = 200/350 (57.14%), Postives = 250/350 (71.43%), Query Frame = 0


Query: 5   AGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVVSIKIIRNKITGQPEGYG 64
           A  P   QPTT +E+RTLWIGDLQYW+DE++L  CFAHTGE+VS K+IRNK TGQ EGYG
Sbjct: 47  AAAPPSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYG 106

Query: 65  FVEFVSHAAAERILQTYNGTQMPG-TEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPD 124
           F+EF SHAAAER+LQT+N   +P   +Q FRLNWAS   G++R D+ P+++IFVGDLA D
Sbjct: 107 FIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDS-PDYTIFVGDLAAD 166

Query: 125 VTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVYCSTR 184
           VTDY+L ETFRA YPSV+GAKVV D  TGR+KGYGFV+F+DE+E+ RAMTEMNGV CSTR
Sbjct: 167 VTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTR 226

Query: 185 PMRISAATPKKTIGVQQQYNTLGKAMYPVPAYTTPVPTLPADYDSNNTTIFVGNLDPNIT 244
           PMRI  A  KK +  Q+             +Y +    +  D D NNTT+FVG LD ++T
Sbjct: 227 PMRIGPAASKKGVTGQRD------------SYQSSAAGVTTDNDPNNTTVFVGGLDASVT 286

Query: 245 EEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRTSAEEAIQKMQGKIIGQQVVRTSWGRN 304
           ++ LK  F Q+GEIV+VKIPAGK CGFVQF  ++ AEEA++ + G  +G   VR SWGR+
Sbjct: 287 DDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRS 346

Query: 305 PAAKQELTTWGQQVDPNQWSAYYGYGGGYDAYGYGVVQDPSLYAYGAYSG 354
           P+ K       Q  DP+Q+  Y GYG G + YGY + QDP+ Y YG YSG
Sbjct: 347 PSNK-------QSGDPSQF-YYGGYGQGQEQYGYTMPQDPNAY-YGGYSG 374

[Close]

BLAST of MS007058 vs. TAIR 10
Match: AT5G54900.1 (RNA-binding protein 45A )

HSP 1 Score: 380.6 bits (976), Expect = 1.7e-105
Identity = 197/356 (55.34%), Postives = 240/356 (67.42%), Query Frame = 0


Query: 13  PTTVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVVSIKIIRNKITGQPEGYGFVEFVSHA 72
           P +  +V++LWIGDLQ W+DE+Y+ S FA +GE  S K+IRNK+TGQ EGYGF+EFVSH+
Sbjct: 53  PGSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHS 112

Query: 73  AAERILQTYNGTQMPGTEQTFRLNWASFGIGERR-PDAGPEHSIFVGDLAPDVTDYLLQE 132
            AER+LQTYNG  MP TEQTFRLNWA  G GE+R    GP+H+IFVGDLAP+VTDY+L +
Sbjct: 113 VAERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSD 172

Query: 133 TFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVYCSTRPMRISAAT 192
           TF+  Y SV+GAKVV D  TGRSKGYGFV+FADENE+ RAMTEMNG YCSTRPMRI  A 
Sbjct: 173 TFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAA 232

Query: 193 PKKTIGVQQQYNTLGKAMYPVPA-YTTPVPTLPADYDSNNTTIFVGNLDPNITEEELKQT 252
            K  + +Q             PA Y         D D NNTTIFVG LD N+T++ELK  
Sbjct: 233 NKNALPMQ-------------PAMYQNTQGANAGDNDPNNTTIFVGGLDANVTDDELKSI 292

Query: 253 FLQFGEIVYVKIPAGKGCGFVQFGTRTSAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQEL 312
           F QFGE+++VKIP GK CGFVQ+  + SAE A+  + G  +G Q +R SWGR+P      
Sbjct: 293 FGQFGELLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSP------ 352

Query: 313 TTWGQQVDPNQWS--AYYGY----GGGYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 361
               +Q D  QW+   YYGY     GGY        QDP+ Y YG Y+GY +Y QQ
Sbjct: 353 ---NKQSDQAQWNGGGYYGYPPQPQGGYGYAAQPPTQDPNAY-YGGYTGYGNYQQQ 385

[Close]

BLAST of MS007058 vs. TAIR 10
Match: AT1G47500.1 (RNA-binding protein 47C' )

HSP 1 Score: 378.6 bits (971), Expect = 6.6e-105
Identity = 206/358 (57.54%), Postives = 250/358 (69.83%), Query Frame = 0


Query: 11  HQPTTVEEVRTLWIGDLQYWVDESYLSSCF--AHTGEVVSIKIIRNKITGQPEGYGFVEF 70
           HQ     E +T+W+GDLQ W+DE+YL+S F  A   E+VS+K+IRNK  G  EGYGFVEF
Sbjct: 94  HQNAFNGENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEF 153

Query: 71  VSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERR-PDAGPEHSIFVGDLAPDVTDY 130
            SH  A+++LQ +NG  MP T+Q FRLNWASF  GE+R  + GP+ SIFVGDLAPDV+D 
Sbjct: 154 ESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDA 213

Query: 131 LLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVYCSTRPMRI 190
           LL ETF  +YPSV+ AKVV D NTGRSKGYGFV+F DENER +AMTEMNGV CS+R MRI
Sbjct: 214 LLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRI 273

Query: 191 SAATPKKTIGVQQQYNTLGKAMYPVPAYTTPVPTLPADYDSNNTTIFVGNLDPNITEEEL 250
             ATP+KT G QQQ   +     P  A+T       ++ D+ NTTIFVG LD ++T+E+L
Sbjct: 274 GPATPRKTNGYQQQGGYM-----PSGAFTR------SEGDTINTTIFVGGLDSSVTDEDL 333

Query: 251 KQTFLQFGEIVYVKIPAGKGCGFVQFGTRTSAEEAIQKMQGKIIGQQVVRTSWGRNPAAK 310
           KQ F +FGEIV VKIP GKGCGFVQF  R +AEEA++K+ G +IG+Q VR SWGRNPA K
Sbjct: 334 KQPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANK 393

Query: 311 QELTTWGQQ-VDPNQWSAYYGYGGGYDAYGYGVVQ-DPSLY-AYGAYSGYASYPQQAS 363
           Q    +G Q VDP     YYG G  Y+ YGY V Q DP +Y A   Y  Y  + QQ S
Sbjct: 394 QPRDKYGNQWVDP-----YYG-GQFYNGYGYMVPQPDPRMYPAAPYYPMYGGHQQQVS 434

The following BLAST results are available for this feature:

BLAST of MS007058 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154792.1	6.5e-248	97.24	polyadenylate-binding protein RBP47B' isoform X1 [Momordica charantia] >XP_02215...	[more]
XP_022154794.1	4.0e-245	96.78	polyadenylate-binding protein RBP47B' isoform X2 [Momordica charantia]	[more]
XP_008437079.1	3.4e-236	92.64	PREDICTED: polyadenylate-binding protein RBP47B' isoform X3 [Cucumis melo]	[more]
XP_022969897.1	5.7e-236	92.87	polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita maxima] >XP_022...	[more]
XP_022922187.1	1.3e-235	92.64	polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita moschata] >XP_0...	[more]

BLAST of MS007058 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VXZ9	8.2e-161	67.05	Polyadenylate-binding protein RBP47B' OS=Arabidopsis thaliana OX=3702 GN=RBP47B'...	[more]
Q9LEB4	8.6e-118	63.95	Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]
Q9LEB3	1.3e-110	58.22	Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]
Q0J9Y2	1.3e-110	58.99	RNA-binding protein L OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-L PE=1 SV=...	[more]
Q9SAB3	1.4e-107	57.14	Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B P...	[more]

BLAST of MS007058 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DLA1	3.2e-248	97.24	polyadenylate-binding protein RBP47B' isoform X1 OS=Momordica charantia OX=3673 ...	[more]
A0A6J1DN83	1.9e-245	96.78	polyadenylate-binding protein RBP47B' isoform X2 OS=Momordica charantia OX=3673 ...	[more]
A0A1S3ATQ6	1.6e-236	92.64	polyadenylate-binding protein RBP47B' isoform X3 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1HXL5	2.8e-236	92.87	polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita maxima OX=366...	[more]
A0A6J1E2I3	6.2e-236	92.64	polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita moschata OX=3...	[more]

BLAST of MS007058 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19350.1	5.9e-162	67.05	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G19350.2	2.5e-160	66.28	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G11650.2	9.8e-109	57.14	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G54900.1	1.7e-105	55.34	RNA-binding protein 45A	[more]
AT1G47500.1	6.6e-105	57.54	RNA-binding protein 47C'	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 21..96 e-value: 8.1E-15 score: 65.2 coord: 114..188 e-value: 5.7E-21 score: 85.7 coord: 232..299 e-value: 7.6E-23 score: 91.9
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 115..179 e-value: 3.9E-16 score: 58.6 coord: 233..296 e-value: 7.4E-19 score: 67.4 coord: 22..90 e-value: 1.2E-14 score: 53.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 20..100 score: 15.425642
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 231..303 score: 17.421124
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 113..192 score: 17.387012
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 19..99 e-value: 1.7E-24 score: 87.7
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 103..209 e-value: 2.4E-22 score: 81.3
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 221..310 e-value: 4.0E-25 score: 90.0
None	No IPR available	PANTHER	PTHR47640:SF6	POLYADENYLATE-BINDING PROTEIN RBP45A-RELATED	coord: 10..360
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 10..360
None	No IPR available	CDD	cd12346	RRM3_NGR1_NAM8_like	coord: 230..301 e-value: 3.92317E-39 score: 133.583
None	No IPR available	CDD	cd12345	RRM2_SECp43_like	coord: 112..191 e-value: 8.67187E-55 score: 174.775
None	No IPR available	CDD	cd12344	RRM1_SECp43_like	coord: 21..101 e-value: 8.85796E-49 score: 158.965
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 8..88
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 112..305

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS007058.1	MS007058.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding