MS007041 (gene) Bitter gourd (TR) v1

Overview
NameMS007041
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Locationscaffold430: 27431 .. 27559 (-)
RNA-Seq ExpressionMS007041
SyntenyMS007041
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGTTTAGCATACCTATAAATACGAGAATAAGCTTTATGGACTTTTGGTTGTATCTAATTGATCATTTAAATCCAGATGAAATAGGGCTTGCTGCTGTTACCTGTTGGGCGACTTGGGGTGATCGGAAC

mRNA sequence

TTGTTTAGCATACCTATAAATACGAGAATAAGCTTTATGGACTTTTGGTTGTATCTAATTGATCATTTAAATCCAGATGAAATAGGGCTTGCTGCTGTTACCTGTTGGGCGACTTGGGGTGATCGGAAC

Coding sequence (CDS)

TTGTTTAGCATACCTATAAATACGAGAATAAGCTTTATGGACTTTTGGTTGTATCTAATTGATCATTTAAATCCAGATGAAATAGGGCTTGCTGCTGTTACCTGTTGGGCGACTTGGGGTGATCGGAAC

Protein sequence

LFSIPINTRISFMDFWLYLIDHLNPDEIGLAAVTCWATWGDRN
Homology
[Close]
BLAST of MS007041 vs. NCBI nr
Match: XP_022131661.1 (uncharacterized protein LOC111004786 [Momordica charantia])

HSP 1 Score: 58.9 bits (141), Expect = 1.2e-05
Identity = 26/43 (60.47%), Postives = 29/43 (67.44%), Query Frame = 0 

Query: 1  LFSIPINTRISFMDFWLYLIDHLNPDEIGLAAVTCWATWGDRN 44
          LF+ PIN  +SFMD WL L D LNP +  LAA T WA W DRN
Sbjct: 25 LFTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFTXWAIWCDRN 67

[Close]
BLAST of MS007041 vs. ExPASy TrEMBL
Match: A0A6J1BQ49 (uncharacterized protein LOC111004786 OS=Momordica charantia OX=3673 GN=LOC111004786 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.9e-06
Identity = 26/43 (60.47%), Postives = 29/43 (67.44%), Query Frame = 0 

Query: 1  LFSIPINTRISFMDFWLYLIDHLNPDEIGLAAVTCWATWGDRN 44
          LF+ PIN  +SFMD WL L D LNP +  LAA T WA W DRN
Sbjct: 25 LFTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFTXWAIWCDRN 67

The following BLAST results are available for this feature:
BLAST of MS007041 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022131661.11.2e-0560.47uncharacterized protein LOC111004786 [Momordica charantia][more]
BLAST of MS007041 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MS007041 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1BQ495.9e-0660.47uncharacterized protein LOC111004786 OS=Momordica charantia OX=3673 GN=LOC111004... [more]
BLAST of MS007041 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS007041.1MS007041.1mRNA