MS006856 (gene) Bitter gourd (TR) v1

Overview


Name	MS006856
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	tetraspanin-3-like
Location	scaffold871: 34001 .. 38351 (-)
RNA-Seq Expression	MS006856
Synteny	MS006856

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAGCAGCAACCACTTAATCGGGCTCCTAAATTTCCTGACCTTCCTCCTGTCCCTCCCCATTATCGGCGGCGGCGTGTGGCTGAGCAGCCGCGCCAACACCACCGACTGCGTCAAGTTCCTCCAGTGGCCCCTCATCGGGATCGGCGTCGCCCTCCTCGTCGTCTCCCTCGCCGGCTTCGGCGGCGCCTGCTACCGCAACACATTCCTCATGTGGTTCTACCTCTTCCTCATGTTCTTCGTCATCGGCGCCCTCGTCGGCTTCATCATCTTCGCCTACGCCGCCACCGACCGCGGCTCCGGCCGCCCCCAGCCCAACCGCGCCTACTTCGACTACTATCTCCACGACTACTCCGGCTGGCTCCGCGACCGCGTCGCCGACGACGCCTACTGGCCCAAGATCGCCTCCTGCGTTAGAGACTCCAAAGTCTGCCGGAACATCGCCAGAACCGCCGGTGGCCTGCCGGAGACCGTCGACATGTTTTATCTCAGGCACCTCACCCCGCTCGAGGTACGTACTTTCTTTCTTTCAAAAATCATTATTTTTTTAAAAAAAATTATTTTTATTTTTATATTTAGTGGTGAATTTTTGATGAAGATAAAATTTGTCAAAACGGCTACTCAAGGATAAGGATAGTATTTACTGGTAAGAACTTAAATATTTTGTTTTATTCGATTTAACTTTTAAAAATTTGAAAAATATTAAATTTGTTATTTATGGACTATATAATTACATTTTTTACAGACAAGAAATAATAATCACAAAATAAGTGTTTCTTTTAGTCTGGATTGATAGATATACGAGTATTGTAATTCTAAATATTCCCTCGTTAATGGAAGTTTAGTTTTAGTTGGTTGTAATCAAGAAATTCTTGATTTCACTTGGTGGAGAAGGAAGAAATTACCACCCCTTTTCGTTTTAGATTTAAAATATTATATTAAAAGAAGCTTTTTTCTAAACAATATATTAAAAGAAGCTGAAACTTTATAGAATTGAAAAATTATATATACAAAAATTTGATTTGACCCCGGTGACTAGTTATGAATTGAGGTGTACTTGAACAAACCTGAATATTTACATTATATAAGAAAAAAACTTTTTTAGATAAATTATACATTTTAACAAGTAATTCTAAATTTATGATCTCAAGTATAAAAATATGGATTTTGAAACTTTGGGATCCAGTGGAAATCAAGTTGTATTTGCCTAAATATGTTTTAAATCTTTAGAAAATGATGAAGTTGGATTATTTATTTATTTATTTATTACTATTTGGTATTTCTAAAACATAAAATAATTAAAAACTGTTTGAGTAAAAAATAATTTAAAAATTTTAGATTTAAAAAAAAAAAAAGATTGCTTTATGAAGTGGTTTTTGAAAAAGCAGTTTTATGTGATTACTTAAAAGAAGGCAGATCTGATTTTAAGGAGAGTTTTAATTGCATGTGGAGTGTCATTATTAGTCATGGGCTGGAATACAAGGCCCATGCAATTCCCCCATTAAGCCCTCCTGCGGGCCCACTTATCTACTGACACCTCAATTTTTCATTTATTTTTAAATCCAATTCCTCTTATATACCCTTTCTTTTTTTATTTAAAACAATTCTAATTTTGTTTATTGGATTTTAATATAAAAGCAATAACAAATTAATGTGTCAAAAGAGCTCGTACGTTATTAAGTTTAAATTCTTATCTTAGTACTTTCAAATATTTGTTTTGATTTTCTTAAAAAAGAAAATTTTGCTTCTTTTTCTTTTCTTTATTGCATTCGGAAGTTGAACTTATTTGATTAGTAAAAGAAAATAAAAATGAGTCAAACTGAACATATCTCAACAAGTTAAAACACCAATCTCTGACCAAAAATTAGATGATGAGTTCGAATTCTTAATCCACAAAAAGAAAATTTACTTTAAAATTTAAGAGATTGTTTGAAAGTTACGTCTAAAACCGATTAGTATAATTCTTAAAAACAATAGATAGGAAAAAAATATATTGAGAAATTTTATTCACAGGCATAAAATAAATTTGTATTTTTTAAAATGTCACCATTTTTTGTTTCTTAAAAAATATAGCATAATTTCGACTTTTCTTAGTATACTTTATATCACATTTAAATTAAATTGGATTGAATTATACTATTTTTTGTAAAATTTTAAAATTTATGCTATATTTAAAAATGTATTTATTCTATGCTATTTACGTAATTACTTAAAAATATATTTGTTTTTTGTTTTAATGTTAAATTAGTTTTATATGAAATTATATTTTAATATATAATTTAATTTAAACGTGTTGTTTATATTAACGTCCAGAAAAAAAGAGATGAAAACTAGAGTGAAAGGTATTTTTTCAGACATTTTCTTAAATTTAGATAACGGAAAACAATTTAAATTTAATCTAGCTCATATTTTCGATTTCGATACACGTGGCGTAAATCTAGCTCGCGGGCGGTGGCGTTTCCCAAATAACCGCCATGCTTTAGATTCTGTTTCACTTTCTTAAATGCAATGAACTTTTTTTCAATTTTCAGTTTTTTTCCCCTTTATTTCGTGTTTCTTTCCATTAGTATATATTATAAACCTTCGATTTAAACCTACTTCAACTTTTTTAATTAACTAGTTAAATTGAGTATAGCTCAACTGATTAGATATATTATTCCAATATAATTGTTATGTATGTGAATACGAATCTATTTTCCTTTTTCTGATAAAAATATATGAATTCAATCTATATCTCCTCAAATTGTTGTACTAAAAAAGAAATTGATTCAGATCATTTATATGATCAAATATTTACCTTCTTTGAACTAAAATAAAAAAGAAAAAATATTCGAAGAATACTTCTTACCTAGTTGAGACTTTCCTCATATCAGGCTAACTCTTTGTCACACCCTAACAAGATTTTTACATAAATAAATGCCAAAAAAAAAAAAACTTGATATTTAAGATTAAAAAAGAAAGGAAAAGTGACAATCTAGAATATTTTAAAATGATCCAAAGTGAATATGGAGATCCAATATGAAAGGGAGTGAGAAGATAATAATATATATATAAAAAAAAAAAAGCTCAAAACTTTATTAAATTCCTCTCTTTGTAAAGTAGAAAAGTGCCTTTTTCCTCATGACAATAGGCTCAAGTTGTAGAAATATTCAATTTTTTCCCCTCCCATTGTTTTTGCTTGCAAAAGCTATCCTTTTTCTTTCCTTTTTTTTCTTTTCTTTTTTTCCTCTCATTCTAAGTTATAGCTAGAAGGTGATCCTTTAGGACCATTAAATGAGAATCTTATCCATGGTAGACATGGTAGAAGACAAAAAAGTGGGACCTTCCAAAAACTATAGCATCAACCAAGATTCTTAGGTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAGATATAATCTTATCCAGATAGGCTTCATTCAATTTACAAGGGCTTTGAATAAAAGTTTGTAACTTGTGTTATAAAGGTTTAATGGGACGAAAATCCAATAGTTTTCTTGACCGATGGCATTTGAGAATAGGAATGATTTGAGTTACTTAGATCCTTAAATTCTAATACTTTGAAAACTGTGTCAAATTAACCTTGAAACTTTAGAAGATTTCAATCGAGTATTTAGATTTTGAAATGTGTCAATCTGTAGTCCCCACTGTTGTTAGAATAGACGTGACGTTCACCTTTTTAAAATTTAAATGAAATGACATGCTATGATACACTTTGTTTGAGAGATTGATTTGACATATAATTGTATTCTATTTAAAACTAAATTCGTCCATAATAGTACCTAACACAAACTATAGCGGTCGTGGAGACCATTTAAACTTACTTTTGGAAACTTAAAGATTTAAATAATAAGCAATTTCTCTTCAACCTTTTTATCTTATTTTACTTGATTCCAAGAATCTTAAAAGAAAAAAACGTCCAATAATTTCCTCAACTTTAACTTATTTCTTTCTTTATTTGGCAGTCTGGTTGCTGCAAGCCTCCCACAGTGTGTGGGTACGTGTATGTGAATGAGACAATGTGGGATGTGGGAGGAGGCCTCGTGGGGGGTGAACCTGACTGTGGGAGGTGGAGCAATGATCAATCTCAACTCTGTTATGCTTGTGACTCTTGCAAGGCTGGGGTTCTGGCCAGCCTCAAGAAGAGTTGGAGGAAGGTCTCGGTCGTCAATGTCATTGTTCTCATCATTCTCGTCATCTGCTACGTTGTCGGTTATGCAGCCTTTCGAAACAATCGCCGTATCGACAATGACGAACCTGCTAGTTCTGCACGTATGACTAAGGCGAAACCTGGATGGTTTAACTTT

mRNA sequence

ATGAGAAGCAGCAACCACTTAATCGGGCTCCTAAATTTCCTGACCTTCCTCCTGTCCCTCCCCATTATCGGCGGCGGCGTGTGGCTGAGCAGCCGCGCCAACACCACCGACTGCGTCAAGTTCCTCCAGTGGCCCCTCATCGGGATCGGCGTCGCCCTCCTCGTCGTCTCCCTCGCCGGCTTCGGCGGCGCCTGCTACCGCAACACATTCCTCATGTGGTTCTACCTCTTCCTCATGTTCTTCGTCATCGGCGCCCTCGTCGGCTTCATCATCTTCGCCTACGCCGCCACCGACCGCGGCTCCGGCCGCCCCCAGCCCAACCGCGCCTACTTCGACTACTATCTCCACGACTACTCCGGCTGGCTCCGCGACCGCGTCGCCGACGACGCCTACTGGCCCAAGATCGCCTCCTGCGTTAGAGACTCCAAAGTCTGCCGGAACATCGCCAGAACCGCCGGTGGCCTGCCGGAGACCGTCGACATGTTTTATCTCAGGCACCTCACCCCGCTCGAGTCTGGTTGCTGCAAGCCTCCCACAGTGTGTGGGTACGTGTATGTGAATGAGACAATGTGGGATGTGGGAGGAGGCCTCGTGGGGGGTGAACCTGACTGTGGGAGGTGGAGCAATGATCAATCTCAACTCTGTTATGCTTGTGACTCTTGCAAGGCTGGGGTTCTGGCCAGCCTCAAGAAGAGTTGGAGGAAGGTCTCGGTCGTCAATGTCATTGTTCTCATCATTCTCGTCATCTGCTACGTTGTCGGTTATGCAGCCTTTCGAAACAATCGCCGTATCGACAATGACGAACCTGCTAGTTCTGCACGTATGACTAAGGCGAAACCTGGATGGTTTAACTTT

Coding sequence (CDS)

ATGAGAAGCAGCAACCACTTAATCGGGCTCCTAAATTTCCTGACCTTCCTCCTGTCCCTCCCCATTATCGGCGGCGGCGTGTGGCTGAGCAGCCGCGCCAACACCACCGACTGCGTCAAGTTCCTCCAGTGGCCCCTCATCGGGATCGGCGTCGCCCTCCTCGTCGTCTCCCTCGCCGGCTTCGGCGGCGCCTGCTACCGCAACACATTCCTCATGTGGTTCTACCTCTTCCTCATGTTCTTCGTCATCGGCGCCCTCGTCGGCTTCATCATCTTCGCCTACGCCGCCACCGACCGCGGCTCCGGCCGCCCCCAGCCCAACCGCGCCTACTTCGACTACTATCTCCACGACTACTCCGGCTGGCTCCGCGACCGCGTCGCCGACGACGCCTACTGGCCCAAGATCGCCTCCTGCGTTAGAGACTCCAAAGTCTGCCGGAACATCGCCAGAACCGCCGGTGGCCTGCCGGAGACCGTCGACATGTTTTATCTCAGGCACCTCACCCCGCTCGAGTCTGGTTGCTGCAAGCCTCCCACAGTGTGTGGGTACGTGTATGTGAATGAGACAATGTGGGATGTGGGAGGAGGCCTCGTGGGGGGTGAACCTGACTGTGGGAGGTGGAGCAATGATCAATCTCAACTCTGTTATGCTTGTGACTCTTGCAAGGCTGGGGTTCTGGCCAGCCTCAAGAAGAGTTGGAGGAAGGTCTCGGTCGTCAATGTCATTGTTCTCATCATTCTCGTCATCTGCTACGTTGTCGGTTATGCAGCCTTTCGAAACAATCGCCGTATCGACAATGACGAACCTGCTAGTTCTGCACGTATGACTAAGGCGAAACCTGGATGGTTTAACTTT

Protein sequence

MRSSNHLIGLLNFLTFLLSLPIIGGGVWLSSRANTTDCVKFLQWPLIGIGVALLVVSLAGFGGACYRNTFLMWFYLFLMFFVIGALVGFIIFAYAATDRGSGRPQPNRAYFDYYLHDYSGWLRDRVADDAYWPKIASCVRDSKVCRNIARTAGGLPETVDMFYLRHLTPLESGCCKPPTVCGYVYVNETMWDVGGGLVGGEPDCGRWSNDQSQLCYACDSCKAGVLASLKKSWRKVSVVNVIVLIILVICYVVGYAAFRNNRRIDNDEPASSARMTKAKPGWFNF

Homology

[Close]

BLAST of MS006856 vs. NCBI nr
Match: XP_038893969.1 (tetraspanin-3-like [Benincasa hispida])

HSP 1 Score: 547.0 bits (1408), Expect = 9.8e-152
Identity = 254/284 (89.44%), Postives = 269/284 (94.72%), Query Frame = 0


Query: 1   MRSSNHLIGLLNFLTFLLSLPIIGGGVWLSSRANTTDCVKFLQWPLIGIGVALLVVSLAG 60
           MR+SNHLIGLLNF+TFLLSLPIIGGGVWLSSRANTTDC+KFLQWPLIGIGVA++VVSLAG
Sbjct: 1   MRASNHLIGLLNFITFLLSLPIIGGGVWLSSRANTTDCLKFLQWPLIGIGVAIMVVSLAG 60

Query: 61  FGGACYRNTFLMWFYLFLMFFVIGALVGFIIFAYAATDRGSGRPQPNRAYFDYYLHDYSG 120
           FGGACYRNTFLMWFYLF+MFFVIGALVGFIIFAYA T+RGSGRP PNR YFDYYL DYSG
Sbjct: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRNYFDYYLQDYSG 120

Query: 121 WLRDRVADDAYWPKIASCVRDSKVCRNIARTAGGLPETVDMFYLRHLTPLESGCCKPPTV 180
           WLRDRVADD YW KI+SCVRDSK C+ IART  G+PETVDMFYLRHLTP+ESGCCKPPTV
Sbjct: 121 WLRDRVADDTYWAKISSCVRDSKACQKIARTVSGVPETVDMFYLRHLTPVESGCCKPPTV 180

Query: 181 CGYVYVNETMWDVGGGLVGGEPDCGRWSNDQSQLCYACDSCKAGVLASLKKSWRKVSVVN 240
           CGYVYVNETMWD GGGLVG EPDCGRWSNDQ QLCYACDSCKAGVLASLKKSWRKVSV+N
Sbjct: 181 CGYVYVNETMWDFGGGLVGAEPDCGRWSNDQGQLCYACDSCKAGVLASLKKSWRKVSVIN 240

Query: 241 VIVLIILVICYVVGYAAFRNNRRIDNDEPASSARMTKAKPGWFN 285
           +IVLIILVI YVVGYAAFRNNRRIDNDEPAS+ARMTK+KP WFN
Sbjct: 241 IIVLIILVISYVVGYAAFRNNRRIDNDEPASTARMTKSKPSWFN 284

[Close]

BLAST of MS006856 vs. NCBI nr
Match: XP_008463449.1 (PREDICTED: tetraspanin-3-like [Cucumis melo])

HSP 1 Score: 543.1 bits (1398), Expect = 1.4e-150
Identity = 251/284 (88.38%), Postives = 268/284 (94.37%), Query Frame = 0


Query: 1   MRSSNHLIGLLNFLTFLLSLPIIGGGVWLSSRANTTDCVKFLQWPLIGIGVALLVVSLAG 60
           MR+SNHLIGLLNF+TFLLSLPIIGGGVWLSSRANTTDC+KFLQWPLIGIGVA++VVSLAG
Sbjct: 1   MRASNHLIGLLNFITFLLSLPIIGGGVWLSSRANTTDCLKFLQWPLIGIGVAIMVVSLAG 60

Query: 61  FGGACYRNTFLMWFYLFLMFFVIGALVGFIIFAYAATDRGSGRPQPNRAYFDYYLHDYSG 120
           FGGACYRNTFLMWFYLF+MFFVIGALVGFIIFAYA T++GSGRP PNR YFDYYL DYSG
Sbjct: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTEKGSGRPLPNRNYFDYYLQDYSG 120

Query: 121 WLRDRVADDAYWPKIASCVRDSKVCRNIARTAGGLPETVDMFYLRHLTPLESGCCKPPTV 180
           WLRDRVADD YW KI+SCVRDS+ CR I RT  G+PETVDMFYLRHLTP+ESGCCKPPTV
Sbjct: 121 WLRDRVADDTYWGKISSCVRDSQACRKIGRTISGVPETVDMFYLRHLTPVESGCCKPPTV 180

Query: 181 CGYVYVNETMWDVGGGLVGGEPDCGRWSNDQSQLCYACDSCKAGVLASLKKSWRKVSVVN 240
           CGYVYVNETMWD GGGLVG EPDCGRWSNDQ QLCYACDSCKAGVLASLKKSWRKVSV+N
Sbjct: 181 CGYVYVNETMWDFGGGLVGAEPDCGRWSNDQDQLCYACDSCKAGVLASLKKSWRKVSVIN 240

Query: 241 VIVLIILVICYVVGYAAFRNNRRIDNDEPASSARMTKAKPGWFN 285
           +IVLIILVI YV+GYAAFRNNRRIDNDEPAS+ARMTK+KP WFN
Sbjct: 241 IIVLIILVISYVIGYAAFRNNRRIDNDEPASTARMTKSKPSWFN 284

[Close]

BLAST of MS006856 vs. NCBI nr
Match: XP_022998885.1 (tetraspanin-3-like [Cucurbita maxima])

HSP 1 Score: 542.7 bits (1397), Expect = 1.9e-150
Identity = 249/284 (87.68%), Postives = 269/284 (94.72%), Query Frame = 0


Query: 1   MRSSNHLIGLLNFLTFLLSLPIIGGGVWLSSRANTTDCVKFLQWPLIGIGVALLVVSLAG 60
           MR+SNHLIGLLNFLTFLLSLPIIGGG+WLSSRANTTDC+KFLQWPLIGIGV +++VSLAG
Sbjct: 1   MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG 60

Query: 61  FGGACYRNTFLMWFYLFLMFFVIGALVGFIIFAYAATDRGSGRPQPNRAYFDYYLHDYSG 120
           FGGACYRNTFLMWFYLF+MFFVIGALVGFIIFAYA T+RGSGRP PNRAYFDYYL DYSG
Sbjct: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG 120

Query: 121 WLRDRVADDAYWPKIASCVRDSKVCRNIARTAGGLPETVDMFYLRHLTPLESGCCKPPTV 180
           WLRDRVADD+YW KI+SCVRDS  CR I RT  G+PETVDMFY RHLTP+ESGCCKPPTV
Sbjct: 121 WLRDRVADDSYWAKISSCVRDSGSCRKIVRTVSGVPETVDMFYHRHLTPVESGCCKPPTV 180

Query: 181 CGYVYVNETMWDVGGGLVGGEPDCGRWSNDQSQLCYACDSCKAGVLASLKKSWRKVSVVN 240
           CGYVYVNET WDVGGG+VGGEPDCGRWSNDQ QLCYACDSCKAGVLA+LKKSWRKVSVVN
Sbjct: 181 CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN 240

Query: 241 VIVLIILVICYVVGYAAFRNNRRIDNDEPASSARMTKAKPGWFN 285
           +IVLI+LV+ YV+GYAAFRNNRRIDNDEPAS+ARMTK+KPGWFN
Sbjct: 241 IIVLIVLVVSYVIGYAAFRNNRRIDNDEPASTARMTKSKPGWFN 284

[Close]

BLAST of MS006856 vs. NCBI nr
Match: XP_023521528.1 (tetraspanin-3-like [Cucurbita pepo subsp. pepo] >XP_023523592.1 tetraspanin-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 539.7 bits (1389), Expect = 1.6e-149
Identity = 248/284 (87.32%), Postives = 268/284 (94.37%), Query Frame = 0


Query: 1   MRSSNHLIGLLNFLTFLLSLPIIGGGVWLSSRANTTDCVKFLQWPLIGIGVALLVVSLAG 60
           MR+SNHLIGLLNFLTFLLSLPIIGGG+WLSSRANTTDC+KFLQWPLIGIGV +++VSLAG
Sbjct: 1   MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG 60

Query: 61  FGGACYRNTFLMWFYLFLMFFVIGALVGFIIFAYAATDRGSGRPQPNRAYFDYYLHDYSG 120
           FGGACYRNTFLMWFYLF+MFFVIGALVGFIIFAYA T+RGSGRP PNRAYFDYYL DYSG
Sbjct: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG 120

Query: 121 WLRDRVADDAYWPKIASCVRDSKVCRNIARTAGGLPETVDMFYLRHLTPLESGCCKPPTV 180
           WLRDRVADD+YW KI+SCVRDS  CR I RT  G+PETVDMFY RHLTP+ESGCCKPPTV
Sbjct: 121 WLRDRVADDSYWAKISSCVRDSGSCRKIVRTVNGVPETVDMFYHRHLTPVESGCCKPPTV 180

Query: 181 CGYVYVNETMWDVGGGLVGGEPDCGRWSNDQSQLCYACDSCKAGVLASLKKSWRKVSVVN 240
           CGYVYVNET WDVGGG+VGGEPDCGRWSNDQ QLCYACDSCKAGVLA+LKKSWRKVSVVN
Sbjct: 181 CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN 240

Query: 241 VIVLIILVICYVVGYAAFRNNRRIDNDEPASSARMTKAKPGWFN 285
           +IVLI+LVI YV+GYA FRNNRRIDN+EPAS+ARMTK+KPGWFN
Sbjct: 241 IIVLIVLVISYVIGYATFRNNRRIDNNEPASTARMTKSKPGWFN 284

[Close]

BLAST of MS006856 vs. NCBI nr
Match: XP_022948516.1 (tetraspanin-3-like [Cucurbita moschata])

HSP 1 Score: 538.9 bits (1387), Expect = 2.7e-149
Identity = 247/284 (86.97%), Postives = 269/284 (94.72%), Query Frame = 0


Query: 1   MRSSNHLIGLLNFLTFLLSLPIIGGGVWLSSRANTTDCVKFLQWPLIGIGVALLVVSLAG 60
           MR+SNHLIGLLNFLTFLLSLPIIGGG+WLSSRANTTDC+KFLQWPLIGIGV +++VSLAG
Sbjct: 1   MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG 60

Query: 61  FGGACYRNTFLMWFYLFLMFFVIGALVGFIIFAYAATDRGSGRPQPNRAYFDYYLHDYSG 120
           FGGACYRNTFLMWFYLF+MFFVIGALVGFIIFAYA T+RGSGRP PNRAYFDYYL DYSG
Sbjct: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG 120

Query: 121 WLRDRVADDAYWPKIASCVRDSKVCRNIARTAGGLPETVDMFYLRHLTPLESGCCKPPTV 180
           WLRDRVADD+YW KI+SCVRDS  CR I RT  G+PETVDMFY RHLTP+ESGCCKPPTV
Sbjct: 121 WLRDRVADDSYWAKISSCVRDSGSCRKIVRTVNGVPETVDMFYHRHLTPVESGCCKPPTV 180

Query: 181 CGYVYVNETMWDVGGGLVGGEPDCGRWSNDQSQLCYACDSCKAGVLASLKKSWRKVSVVN 240
           CGYVYVNET WDVGGG+VGGEPDCGRWSNDQ QLCYACDSCKAGVLA+LKKSWRKVSVVN
Sbjct: 181 CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN 240

Query: 241 VIVLIILVICYVVGYAAFRNNRRIDNDEPASSARMTKAKPGWFN 285
           +IVLI+LV+ YV+GYAAFRNNRRIDN+EPAS+ARMTK+KPGWF+
Sbjct: 241 IIVLIVLVVSYVIGYAAFRNNRRIDNNEPASTARMTKSKPGWFS 284

[Close]

BLAST of MS006856 vs. ExPASy Swiss-Prot
Match: Q9M1E7 (Tetraspanin-3 OS=Arabidopsis thaliana OX=3702 GN=TET3 PE=1 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 3.4e-123
Identity = 201/284 (70.77%), Postives = 237/284 (83.45%), Query Frame = 0


Query: 1   MRSSNHLIGLLNFLTFLLSLPIIGGGVWLSSRANTTDCVKFLQWPLIGIGVALLVVSLAG 60
           MR+SNHLIGL+NFLTFLLS+PI+GGG+WLSSRAN+TDC++FLQWPLI IG++++VVSLAG
Sbjct: 1   MRTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAG 60

Query: 61  FGGACYRNTFLMWFYLFLMFFVIGALVGFIIFAYAATDRGSGRPQPNRAYFDYYLHDYSG 120
           F GACYRN FLMW YL +M  +I AL+GFIIFAYA TD+GSGR   NR Y DYYL DYSG
Sbjct: 61  FAGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSG 120

Query: 121 WLRDRVADDAYWPKIASCVRDSKVCRNIARTAGGLPETVDMFYLRHLTPLESGCCKPPTV 180
           WL+DRV+DD+YW KI+SC+RDS  CR I R   G+PET DMF+LR L+P+ESGCCKPPT 
Sbjct: 121 WLKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTD 180

Query: 181 CGYVYVNETMWDVGGGLVGGEPDCGRWSNDQSQLCYACDSCKAGVLASLKKSWRKVSVVN 240
           CG+ YVNET WD  GG++G   DC  WSNDQS LCY C SCKAGVL SLKKSWRKVSV+N
Sbjct: 181 CGFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVIN 240

Query: 241 VIVLIILVICYVVGYAAFRNNRRIDNDEPASSARMTKAKPGWFN 285
           ++VLIILVI YV+ YAA+RN +RIDNDEPA  ARMTK+ P  F+
Sbjct: 241 IVVLIILVIFYVIAYAAYRNVKRIDNDEPAGEARMTKSHPSHFH 284

[Close]

BLAST of MS006856 vs. ExPASy Swiss-Prot
Match: Q9LSS4 (Tetraspanin-4 OS=Arabidopsis thaliana OX=3702 GN=TET4 PE=3 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 5.5e-113
Identity = 186/276 (67.39%), Postives = 223/276 (80.80%), Query Frame = 0


Query: 1   MRSSNHLIGLLNFLTFLLSLPIIGGGVWLSSRANTTDCVKFLQWPLIGIGVALLVVSLAG 60
           MRS ++LIGL+NF TFLLS+PI+GGG+WLSSRAN+TDC++FLQWPLI IG++++V+SLAG
Sbjct: 1   MRSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAG 60

Query: 61  FGGACYRNTFLMWFYLFLMFFVIGALVGFIIFAYAATDRGSGRPQPNRAYFDYYLHDYSG 120
             GACY+N FLMW YLF MFFVI AL+GF IFAY  TD+GSGR   NR Y DYYL+DYSG
Sbjct: 61  IAGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSG 120

Query: 121 WLRDRVADDAYWPKIASCVRDSKVCRNIARTAGGLPETVDMFYLRHLTPLESGCCKPPTV 180
           WL+DRV D+ YW  I SCVRDS VC+ I R   G+PET  MFY R+L+P+ESGCCKPPT 
Sbjct: 121 WLKDRVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTD 180

Query: 181 CGYVYVNETMWDVGGGLVGGEPDCGRWSNDQSQLCYACDSCKAGVLASLKKSWRKVSVVN 240
           CGY YVNET+W  GG +VG  PDC  W+NDQ  LCY C SCKAGVL SLKKSWRKVSV+N
Sbjct: 181 CGYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVIN 240

Query: 241 VIVLIILVICYVVGYAAFRNNRRIDNDEPASSARMT 277
           ++V+IILVI YV+  AA++N +R+ NDEP   ARMT
Sbjct: 241 IVVVIILVIFYVIACAAYQNVKRMYNDEPVGEARMT 276

[Close]

BLAST of MS006856 vs. ExPASy Swiss-Prot
Match: Q8S8Q6 (Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 2.4e-68
Identity = 123/265 (46.42%), Postives = 176/265 (66.42%), Query Frame = 0


Query: 2   RSSNHLIGLLNFLTFLLSLPIIGGGVWLSSRANTTDCVKFLQWPLIGIGVALLVVSLAGF 61
           R SN+L+G+LNFL FLLS+PI+ GG+WLS +  +T+C +FL  P+I +GV L+VV++AG 
Sbjct: 3   RCSNNLVGILNFLVFLLSIPILAGGIWLSQK-GSTECERFLDKPVIALGVFLMVVAIAGL 62

Query: 62  GGACYRNTFLMWFYLFLMFFVIGALVGFIIFAYAATDRGSGRPQPNRAYFDYYLHDYSGW 121
            G+C R T+L+W YLF+MF +I  +    +FA+  T++G+G     + Y +Y L DYS W
Sbjct: 63  IGSCCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTW 122

Query: 122 LRDRVADDAYWPKIASCVRDSKVCRNIARTAGGLPETVDMFYLRHLTPLESGCCKPPTVC 181
           L+ RV +   W KI SC+ +SKVC  +      +P  V+ FY  HLT L+SGCCKP   C
Sbjct: 123 LQKRVENGKNWNKIRSCLVESKVCSKLEAKFVNVP--VNSFYKEHLTALQSGCCKPSDEC 182

Query: 182 GYVYVNETMWDVGGGLVGGEPDCGRWSNDQSQLCYACDSCKAGVLASLKKSWRKVSVVNV 241
           G+ YVN T W          PDC  W N + +LC+ C SCKAG+L ++K +W+KV++VN+
Sbjct: 183 GFEYVNPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNI 242

Query: 242 IVLIILVICYVVGYAAFRNNRRIDN 267
           + L+ L+I Y VG  AFRNN+R D+
Sbjct: 243 VFLVFLIIVYSVGCCAFRNNKRDDS 264

[Close]

BLAST of MS006856 vs. ExPASy Swiss-Prot
Match: Q9M0B7 (Tetraspanin-9 OS=Arabidopsis thaliana OX=3702 GN=TET9 PE=2 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 8.0e-64
Identity = 118/262 (45.04%), Postives = 169/262 (64.50%), Query Frame = 0


Query: 1   MRSSNHLIGLLNFLTFLLSLPIIGGGVWLSSRANTTDCVKFLQWPLIGIGVALLVVSLAG 60
           +R SN L+G+LNF  FLLS+PI+  G+WLS +A TT C +FL  P+I +GV L+++++AG
Sbjct: 2   VRFSNSLVGILNFFVFLLSVPILSTGIWLSLKA-TTQCERFLDKPMIALGVFLMIIAIAG 61

Query: 61  FGGACYRNTFLMWFYLFLMFFVIGALVGFIIFAYAATDRGSGRPQPNRAYFDYYLHDYSG 120
             G+C R T+L+W YLF+MFF+I  ++ F IFA+  T +GSG     +AY +Y L  YS 
Sbjct: 62  VVGSCCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYSD 121

Query: 121 WLRDRVADDAYWPKIASCVRDSKVCRNIARTAGGLPETVDMFYLRHLTPLESGCCKPPTV 180
           WL+ RV +  +W  I SC+ +SK C N+         TV  FY   LT  ESGCCKP   
Sbjct: 122 WLQRRVNNAKHWNSIRSCLYESKFCYNLELVTAN--HTVSDFYKEDLTAFESGCCKPSND 181

Query: 181 CGYVYVNETMWDVGGGLVGGEPDCGRWSNDQSQLCYACDSCKAGVLASLKKSWRKVSVVN 240
           C + Y+  T W+   G      DC  W N++ +LCY C +CKAG L +LK +W++V++VN
Sbjct: 182 CDFTYITSTTWNKTSG-THKNSDCQLWDNEKHKLCYNCKACKAGFLDNLKAAWKRVAIVN 241

Query: 241 VIVLIILVICYVVGYAAFRNNR 263
           +I L++LV+ Y +G  AFRNN+
Sbjct: 242 IIFLVLLVVVYAMGCCAFRNNK 259

[Close]

BLAST of MS006856 vs. ExPASy Swiss-Prot
Match: Q9FIQ5 (Protein TORNADO 2 OS=Arabidopsis thaliana OX=3702 GN=TRN2 PE=1 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.2e-62
Identity = 122/263 (46.39%), Postives = 167/263 (63.50%), Query Frame = 0


Query: 1   MRSSNHLIGLLNFLTFLLSLPIIGGGVWLSSRANTTDCVKFLQWPLIGIGVALLVVSLAG 60
           M  SN++IG +NF+T LLS+P+IG G+WL+       CVK LQWP+I +GV +L+V LAG
Sbjct: 1   MPLSNNVIGCINFITVLLSIPVIGAGIWLAI-GTVNSCVKLLQWPVIILGVLILLVGLAG 60

Query: 61  FGGACYRNTFLMWFYLFLMFFVI---GALVGFIIFAYAATDRGSGRPQPNRAYFDYYLHD 120
           F G  +R T+L+  YL  M  +I   G LVGFI   Y  T RGSG P+P+RAY +Y L D
Sbjct: 61  FIGGFWRITWLLVVYLIAMLILIVLLGCLVGFI---YMVTIRGSGHPEPSRAYLEYSLQD 120

Query: 121 YSGWLRDRVADDAYWPKIASCVRDSKVCRNIARTAGGLPETVDMFYLRHLTPLESGCCKP 180
           +SGWLR RV     W +I +C+  + +C  + +           F+  HL P++SGCCKP
Sbjct: 121 FSGWLRRRVQRSYKWERIRTCLSTTTICPELNQRY----TLAQDFFNAHLDPIQSGCCKP 180

Query: 181 PTVCGYVYVNETMWDVGGGLVGGEPDCGRWSNDQSQLCYACDSCKAGVLASLKKSWRKVS 240
           PT CG+ +VN T W +    +  + DC  WSNDQ+ LCY CDSCKAG+LA++K  W K  
Sbjct: 181 PTKCGFTFVNPTYW-ISPIDMSADMDCLNWSNDQNTLCYTCDSCKAGLLANIKVDWLKAD 240

Query: 241 VVNVIVLIILVICYVVGYAAFRN 261
           +  ++ LI L+I Y++G  AFRN
Sbjct: 241 IFLLLALIGLIIVYIIGCCAFRN 254

[Close]

BLAST of MS006856 vs. ExPASy TrEMBL
Match: A0A1S3CJB4 (tetraspanin-3-like OS=Cucumis melo OX=3656 GN=LOC103501616 PE=4 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 6.9e-151
Identity = 251/284 (88.38%), Postives = 268/284 (94.37%), Query Frame = 0


Query: 1   MRSSNHLIGLLNFLTFLLSLPIIGGGVWLSSRANTTDCVKFLQWPLIGIGVALLVVSLAG 60
           MR+SNHLIGLLNF+TFLLSLPIIGGGVWLSSRANTTDC+KFLQWPLIGIGVA++VVSLAG
Sbjct: 1   MRASNHLIGLLNFITFLLSLPIIGGGVWLSSRANTTDCLKFLQWPLIGIGVAIMVVSLAG 60

Query: 61  FGGACYRNTFLMWFYLFLMFFVIGALVGFIIFAYAATDRGSGRPQPNRAYFDYYLHDYSG 120
           FGGACYRNTFLMWFYLF+MFFVIGALVGFIIFAYA T++GSGRP PNR YFDYYL DYSG
Sbjct: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTEKGSGRPLPNRNYFDYYLQDYSG 120

Query: 121 WLRDRVADDAYWPKIASCVRDSKVCRNIARTAGGLPETVDMFYLRHLTPLESGCCKPPTV 180
           WLRDRVADD YW KI+SCVRDS+ CR I RT  G+PETVDMFYLRHLTP+ESGCCKPPTV
Sbjct: 121 WLRDRVADDTYWGKISSCVRDSQACRKIGRTISGVPETVDMFYLRHLTPVESGCCKPPTV 180

Query: 181 CGYVYVNETMWDVGGGLVGGEPDCGRWSNDQSQLCYACDSCKAGVLASLKKSWRKVSVVN 240
           CGYVYVNETMWD GGGLVG EPDCGRWSNDQ QLCYACDSCKAGVLASLKKSWRKVSV+N
Sbjct: 181 CGYVYVNETMWDFGGGLVGAEPDCGRWSNDQDQLCYACDSCKAGVLASLKKSWRKVSVIN 240

Query: 241 VIVLIILVICYVVGYAAFRNNRRIDNDEPASSARMTKAKPGWFN 285
           +IVLIILVI YV+GYAAFRNNRRIDNDEPAS+ARMTK+KP WFN
Sbjct: 241 IIVLIILVISYVIGYAAFRNNRRIDNDEPASTARMTKSKPSWFN 284

[Close]

BLAST of MS006856 vs. ExPASy TrEMBL
Match: A0A6J1KDR8 (tetraspanin-3-like OS=Cucurbita maxima OX=3661 GN=LOC111493409 PE=4 SV=1)

HSP 1 Score: 542.7 bits (1397), Expect = 9.0e-151
Identity = 249/284 (87.68%), Postives = 269/284 (94.72%), Query Frame = 0


Query: 1   MRSSNHLIGLLNFLTFLLSLPIIGGGVWLSSRANTTDCVKFLQWPLIGIGVALLVVSLAG 60
           MR+SNHLIGLLNFLTFLLSLPIIGGG+WLSSRANTTDC+KFLQWPLIGIGV +++VSLAG
Sbjct: 1   MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG 60

Query: 61  FGGACYRNTFLMWFYLFLMFFVIGALVGFIIFAYAATDRGSGRPQPNRAYFDYYLHDYSG 120
           FGGACYRNTFLMWFYLF+MFFVIGALVGFIIFAYA T+RGSGRP PNRAYFDYYL DYSG
Sbjct: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG 120

Query: 121 WLRDRVADDAYWPKIASCVRDSKVCRNIARTAGGLPETVDMFYLRHLTPLESGCCKPPTV 180
           WLRDRVADD+YW KI+SCVRDS  CR I RT  G+PETVDMFY RHLTP+ESGCCKPPTV
Sbjct: 121 WLRDRVADDSYWAKISSCVRDSGSCRKIVRTVSGVPETVDMFYHRHLTPVESGCCKPPTV 180

Query: 181 CGYVYVNETMWDVGGGLVGGEPDCGRWSNDQSQLCYACDSCKAGVLASLKKSWRKVSVVN 240
           CGYVYVNET WDVGGG+VGGEPDCGRWSNDQ QLCYACDSCKAGVLA+LKKSWRKVSVVN
Sbjct: 181 CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN 240

Query: 241 VIVLIILVICYVVGYAAFRNNRRIDNDEPASSARMTKAKPGWFN 285
           +IVLI+LV+ YV+GYAAFRNNRRIDNDEPAS+ARMTK+KPGWFN
Sbjct: 241 IIVLIVLVVSYVIGYAAFRNNRRIDNDEPASTARMTKSKPGWFN 284

[Close]

BLAST of MS006856 vs. ExPASy TrEMBL
Match: A0A6J1G9E4 (tetraspanin-3-like OS=Cucurbita moschata OX=3662 GN=LOC111452174 PE=4 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 1.3e-149
Identity = 247/284 (86.97%), Postives = 269/284 (94.72%), Query Frame = 0


Query: 1   MRSSNHLIGLLNFLTFLLSLPIIGGGVWLSSRANTTDCVKFLQWPLIGIGVALLVVSLAG 60
           MR+SNHLIGLLNFLTFLLSLPIIGGG+WLSSRANTTDC+KFLQWPLIGIGV +++VSLAG
Sbjct: 1   MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG 60

Query: 61  FGGACYRNTFLMWFYLFLMFFVIGALVGFIIFAYAATDRGSGRPQPNRAYFDYYLHDYSG 120
           FGGACYRNTFLMWFYLF+MFFVIGALVGFIIFAYA T+RGSGRP PNRAYFDYYL DYSG
Sbjct: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG 120

Query: 121 WLRDRVADDAYWPKIASCVRDSKVCRNIARTAGGLPETVDMFYLRHLTPLESGCCKPPTV 180
           WLRDRVADD+YW KI+SCVRDS  CR I RT  G+PETVDMFY RHLTP+ESGCCKPPTV
Sbjct: 121 WLRDRVADDSYWAKISSCVRDSGSCRKIVRTVNGVPETVDMFYHRHLTPVESGCCKPPTV 180

Query: 181 CGYVYVNETMWDVGGGLVGGEPDCGRWSNDQSQLCYACDSCKAGVLASLKKSWRKVSVVN 240
           CGYVYVNET WDVGGG+VGGEPDCGRWSNDQ QLCYACDSCKAGVLA+LKKSWRKVSVVN
Sbjct: 181 CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN 240

Query: 241 VIVLIILVICYVVGYAAFRNNRRIDNDEPASSARMTKAKPGWFN 285
           +IVLI+LV+ YV+GYAAFRNNRRIDN+EPAS+ARMTK+KPGWF+
Sbjct: 241 IIVLIVLVVSYVIGYAAFRNNRRIDNNEPASTARMTKSKPGWFS 284

[Close]

BLAST of MS006856 vs. ExPASy TrEMBL
Match: A0A0A0LS61 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G089490 PE=4 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 8.4e-149
Identity = 247/284 (86.97%), Postives = 265/284 (93.31%), Query Frame = 0


Query: 1   MRSSNHLIGLLNFLTFLLSLPIIGGGVWLSSRANTTDCVKFLQWPLIGIGVALLVVSLAG 60
           MR+SNHLIGLLNF+TFLLSLPIIGGGVWLSSRANTTDC+KFLQWPLI IGVA+++VSLAG
Sbjct: 1   MRASNHLIGLLNFITFLLSLPIIGGGVWLSSRANTTDCLKFLQWPLISIGVAIMIVSLAG 60

Query: 61  FGGACYRNTFLMWFYLFLMFFVIGALVGFIIFAYAATDRGSGRPQPNRAYFDYYLHDYSG 120
           FGGACYRNTFLMWFYLF+MFFVIGALVGFIIFAYA T++GSGRP PNR YFDYYL DYSG
Sbjct: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTEKGSGRPLPNRNYFDYYLQDYSG 120

Query: 121 WLRDRVADDAYWPKIASCVRDSKVCRNIARTAGGLPETVDMFYLRHLTPLESGCCKPPTV 180
           WLRDRVADD YW KI+SCVRDS+ CR I RT  G+PETVDMFY RHLTP+ESGCCKPPTV
Sbjct: 121 WLRDRVADDTYWGKISSCVRDSQACRKIGRTISGVPETVDMFYRRHLTPVESGCCKPPTV 180

Query: 181 CGYVYVNETMWDVGGGLVGGEPDCGRWSNDQSQLCYACDSCKAGVLASLKKSWRKVSVVN 240
           CGYVYVNETMWD GGGLVGGEPDCGRWSNDQ QLCYACDSCKA VLASLKKSWRKVSV+N
Sbjct: 181 CGYVYVNETMWDFGGGLVGGEPDCGRWSNDQRQLCYACDSCKAAVLASLKKSWRKVSVIN 240

Query: 241 VIVLIILVICYVVGYAAFRNNRRIDNDEPASSARMTKAKPGWFN 285
           +I LIILVI YV+GYAAFRNNRRIDNDEPAS+ARMTK+KP WFN
Sbjct: 241 IIALIILVISYVIGYAAFRNNRRIDNDEPASTARMTKSKPSWFN 284

[Close]

BLAST of MS006856 vs. ExPASy TrEMBL
Match: A0A6J1I2T9 (tetraspanin-3-like OS=Cucurbita maxima OX=3661 GN=LOC111469410 PE=3 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 4.3e-145
Identity = 241/284 (84.86%), Postives = 260/284 (91.55%), Query Frame = 0


Query: 1   MRSSNHLIGLLNFLTFLLSLPIIGGGVWLSSRANTTDCVKFLQWPLIGIGVALLVVSLAG 60
           MR+SNHLIGLLNFLTFLLSLPIIGGGVWL++ ANTTDC+KFLQWPLI IGVA++VVSLAG
Sbjct: 1   MRTSNHLIGLLNFLTFLLSLPIIGGGVWLTNHANTTDCLKFLQWPLIVIGVAIMVVSLAG 60

Query: 61  FGGACYRNTFLMWFYLFLMFFVIGALVGFIIFAYAATDRGSGRPQPNRAYFDYYLHDYSG 120
           FGGACYRNTFLMW YLF MFF+I A++GFIIFAYA TD+GSGRP PNR Y DYYL DYSG
Sbjct: 61  FGGACYRNTFLMWLYLFAMFFIIAAILGFIIFAYAVTDKGSGRPLPNRLYLDYYLQDYSG 120

Query: 121 WLRDRVADDAYWPKIASCVRDSKVCRNIARTAGGLPETVDMFYLRHLTPLESGCCKPPTV 180
           WLRDR+ADDAYW KI+SCVRDS  CR I RT G LPET+DMFYLRHLTP+ESGCCKPPTV
Sbjct: 121 WLRDRIADDAYWAKISSCVRDSNACRKIGRTVGSLPETIDMFYLRHLTPVESGCCKPPTV 180

Query: 181 CGYVYVNETMWDVGGGLVGGEPDCGRWSNDQSQLCYACDSCKAGVLASLKKSWRKVSVVN 240
           CGYVYVNET+WDVGGGLVG EPDC RWSNDQ QLCYACDSCKAGVLASLKKSWRKVSV+N
Sbjct: 181 CGYVYVNETVWDVGGGLVGPEPDCARWSNDQHQLCYACDSCKAGVLASLKKSWRKVSVIN 240

Query: 241 VIVLIILVICYVVGYAAFRNNRRIDNDEPASSARMTKAKPGWFN 285
           ++VLIILVI YVVGYAAFRNNRR+DNDEPA SARMTK KP WFN
Sbjct: 241 IVVLIILVISYVVGYAAFRNNRRMDNDEPAGSARMTKYKPRWFN 284

[Close]

BLAST of MS006856 vs. TAIR 10
Match: AT3G45600.1 (tetraspanin3 )

HSP 1 Score: 442.6 bits (1137), Expect = 2.4e-124
Identity = 201/284 (70.77%), Postives = 237/284 (83.45%), Query Frame = 0


Query: 1   MRSSNHLIGLLNFLTFLLSLPIIGGGVWLSSRANTTDCVKFLQWPLIGIGVALLVVSLAG 60
           MR+SNHLIGL+NFLTFLLS+PI+GGG+WLSSRAN+TDC++FLQWPLI IG++++VVSLAG
Sbjct: 1   MRTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAG 60

Query: 61  FGGACYRNTFLMWFYLFLMFFVIGALVGFIIFAYAATDRGSGRPQPNRAYFDYYLHDYSG 120
           F GACYRN FLMW YL +M  +I AL+GFIIFAYA TD+GSGR   NR Y DYYL DYSG
Sbjct: 61  FAGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSG 120

Query: 121 WLRDRVADDAYWPKIASCVRDSKVCRNIARTAGGLPETVDMFYLRHLTPLESGCCKPPTV 180
           WL+DRV+DD+YW KI+SC+RDS  CR I R   G+PET DMF+LR L+P+ESGCCKPPT 
Sbjct: 121 WLKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTD 180

Query: 181 CGYVYVNETMWDVGGGLVGGEPDCGRWSNDQSQLCYACDSCKAGVLASLKKSWRKVSVVN 240
           CG+ YVNET WD  GG++G   DC  WSNDQS LCY C SCKAGVL SLKKSWRKVSV+N
Sbjct: 181 CGFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVIN 240

Query: 241 VIVLIILVICYVVGYAAFRNNRRIDNDEPASSARMTKAKPGWFN 285
           ++VLIILVI YV+ YAA+RN +RIDNDEPA  ARMTK+ P  F+
Sbjct: 241 IVVLIILVIFYVIAYAAYRNVKRIDNDEPAGEARMTKSHPSHFH 284

[Close]

BLAST of MS006856 vs. TAIR 10
Match: AT5G60220.1 (tetraspanin4 )

HSP 1 Score: 408.7 bits (1049), Expect = 3.9e-114
Identity = 186/276 (67.39%), Postives = 223/276 (80.80%), Query Frame = 0


Query: 1   MRSSNHLIGLLNFLTFLLSLPIIGGGVWLSSRANTTDCVKFLQWPLIGIGVALLVVSLAG 60
           MRS ++LIGL+NF TFLLS+PI+GGG+WLSSRAN+TDC++FLQWPLI IG++++V+SLAG
Sbjct: 1   MRSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAG 60

Query: 61  FGGACYRNTFLMWFYLFLMFFVIGALVGFIIFAYAATDRGSGRPQPNRAYFDYYLHDYSG 120
             GACY+N FLMW YLF MFFVI AL+GF IFAY  TD+GSGR   NR Y DYYL+DYSG
Sbjct: 61  IAGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSG 120

Query: 121 WLRDRVADDAYWPKIASCVRDSKVCRNIARTAGGLPETVDMFYLRHLTPLESGCCKPPTV 180
           WL+DRV D+ YW  I SCVRDS VC+ I R   G+PET  MFY R+L+P+ESGCCKPPT 
Sbjct: 121 WLKDRVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTD 180

Query: 181 CGYVYVNETMWDVGGGLVGGEPDCGRWSNDQSQLCYACDSCKAGVLASLKKSWRKVSVVN 240
           CGY YVNET+W  GG +VG  PDC  W+NDQ  LCY C SCKAGVL SLKKSWRKVSV+N
Sbjct: 181 CGYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVIN 240

Query: 241 VIVLIILVICYVVGYAAFRNNRRIDNDEPASSARMT 277
           ++V+IILVI YV+  AA++N +R+ NDEP   ARMT
Sbjct: 241 IVVVIILVIFYVIACAAYQNVKRMYNDEPVGEARMT 276

[Close]

BLAST of MS006856 vs. TAIR 10
Match: AT2G23810.1 (tetraspanin8 )

HSP 1 Score: 260.4 bits (664), Expect = 1.7e-69
Identity = 123/265 (46.42%), Postives = 176/265 (66.42%), Query Frame = 0


Query: 2   RSSNHLIGLLNFLTFLLSLPIIGGGVWLSSRANTTDCVKFLQWPLIGIGVALLVVSLAGF 61
           R SN+L+G+LNFL FLLS+PI+ GG+WLS +  +T+C +FL  P+I +GV L+VV++AG 
Sbjct: 3   RCSNNLVGILNFLVFLLSIPILAGGIWLSQK-GSTECERFLDKPVIALGVFLMVVAIAGL 62

Query: 62  GGACYRNTFLMWFYLFLMFFVIGALVGFIIFAYAATDRGSGRPQPNRAYFDYYLHDYSGW 121
            G+C R T+L+W YLF+MF +I  +    +FA+  T++G+G     + Y +Y L DYS W
Sbjct: 63  IGSCCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTW 122

Query: 122 LRDRVADDAYWPKIASCVRDSKVCRNIARTAGGLPETVDMFYLRHLTPLESGCCKPPTVC 181
           L+ RV +   W KI SC+ +SKVC  +      +P  V+ FY  HLT L+SGCCKP   C
Sbjct: 123 LQKRVENGKNWNKIRSCLVESKVCSKLEAKFVNVP--VNSFYKEHLTALQSGCCKPSDEC 182

Query: 182 GYVYVNETMWDVGGGLVGGEPDCGRWSNDQSQLCYACDSCKAGVLASLKKSWRKVSVVNV 241
           G+ YVN T W          PDC  W N + +LC+ C SCKAG+L ++K +W+KV++VN+
Sbjct: 183 GFEYVNPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNI 242

Query: 242 IVLIILVICYVVGYAAFRNNRRIDN 267
           + L+ L+I Y VG  AFRNN+R D+
Sbjct: 243 VFLVFLIIVYSVGCCAFRNNKRDDS 264

[Close]

BLAST of MS006856 vs. TAIR 10
Match: AT4G30430.1 (tetraspanin9 )

HSP 1 Score: 245.4 bits (625), Expect = 5.7e-65
Identity = 118/262 (45.04%), Postives = 169/262 (64.50%), Query Frame = 0


Query: 1   MRSSNHLIGLLNFLTFLLSLPIIGGGVWLSSRANTTDCVKFLQWPLIGIGVALLVVSLAG 60
           +R SN L+G+LNF  FLLS+PI+  G+WLS +A TT C +FL  P+I +GV L+++++AG
Sbjct: 2   VRFSNSLVGILNFFVFLLSVPILSTGIWLSLKA-TTQCERFLDKPMIALGVFLMIIAIAG 61

Query: 61  FGGACYRNTFLMWFYLFLMFFVIGALVGFIIFAYAATDRGSGRPQPNRAYFDYYLHDYSG 120
             G+C R T+L+W YLF+MFF+I  ++ F IFA+  T +GSG     +AY +Y L  YS 
Sbjct: 62  VVGSCCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYSD 121

Query: 121 WLRDRVADDAYWPKIASCVRDSKVCRNIARTAGGLPETVDMFYLRHLTPLESGCCKPPTV 180
           WL+ RV +  +W  I SC+ +SK C N+         TV  FY   LT  ESGCCKP   
Sbjct: 122 WLQRRVNNAKHWNSIRSCLYESKFCYNLELVTAN--HTVSDFYKEDLTAFESGCCKPSND 181

Query: 181 CGYVYVNETMWDVGGGLVGGEPDCGRWSNDQSQLCYACDSCKAGVLASLKKSWRKVSVVN 240
           C + Y+  T W+   G      DC  W N++ +LCY C +CKAG L +LK +W++V++VN
Sbjct: 182 CDFTYITSTTWNKTSG-THKNSDCQLWDNEKHKLCYNCKACKAGFLDNLKAAWKRVAIVN 241

Query: 241 VIVLIILVICYVVGYAAFRNNR 263
           +I L++LV+ Y +G  AFRNN+
Sbjct: 242 IIFLVLLVVVYAMGCCAFRNNK 259

[Close]

BLAST of MS006856 vs. TAIR 10
Match: AT5G46700.1 (Tetraspanin family protein )

HSP 1 Score: 241.5 bits (615), Expect = 8.2e-64
Identity = 122/263 (46.39%), Postives = 167/263 (63.50%), Query Frame = 0


Query: 1   MRSSNHLIGLLNFLTFLLSLPIIGGGVWLSSRANTTDCVKFLQWPLIGIGVALLVVSLAG 60
           M  SN++IG +NF+T LLS+P+IG G+WL+       CVK LQWP+I +GV +L+V LAG
Sbjct: 1   MPLSNNVIGCINFITVLLSIPVIGAGIWLAI-GTVNSCVKLLQWPVIILGVLILLVGLAG 60

Query: 61  FGGACYRNTFLMWFYLFLMFFVI---GALVGFIIFAYAATDRGSGRPQPNRAYFDYYLHD 120
           F G  +R T+L+  YL  M  +I   G LVGFI   Y  T RGSG P+P+RAY +Y L D
Sbjct: 61  FIGGFWRITWLLVVYLIAMLILIVLLGCLVGFI---YMVTIRGSGHPEPSRAYLEYSLQD 120

Query: 121 YSGWLRDRVADDAYWPKIASCVRDSKVCRNIARTAGGLPETVDMFYLRHLTPLESGCCKP 180
           +SGWLR RV     W +I +C+  + +C  + +           F+  HL P++SGCCKP
Sbjct: 121 FSGWLRRRVQRSYKWERIRTCLSTTTICPELNQRY----TLAQDFFNAHLDPIQSGCCKP 180

Query: 181 PTVCGYVYVNETMWDVGGGLVGGEPDCGRWSNDQSQLCYACDSCKAGVLASLKKSWRKVS 240
           PT CG+ +VN T W +    +  + DC  WSNDQ+ LCY CDSCKAG+LA++K  W K  
Sbjct: 181 PTKCGFTFVNPTYW-ISPIDMSADMDCLNWSNDQNTLCYTCDSCKAGLLANIKVDWLKAD 240

Query: 241 VVNVIVLIILVICYVVGYAAFRN 261
           +  ++ LI L+I Y++G  AFRN
Sbjct: 241 IFLLLALIGLIIVYIIGCCAFRN 254

The following BLAST results are available for this feature:

BLAST of MS006856 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893969.1	9.8e-152	89.44	tetraspanin-3-like [Benincasa hispida]	[more]
XP_008463449.1	1.4e-150	88.38	PREDICTED: tetraspanin-3-like [Cucumis melo]	[more]
XP_022998885.1	1.9e-150	87.68	tetraspanin-3-like [Cucurbita maxima]	[more]
XP_023521528.1	1.6e-149	87.32	tetraspanin-3-like [Cucurbita pepo subsp. pepo] >XP_023523592.1 tetraspanin-3-li...	[more]
XP_022948516.1	2.7e-149	86.97	tetraspanin-3-like [Cucurbita moschata]	[more]

BLAST of MS006856 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1E7	3.4e-123	70.77	Tetraspanin-3 OS=Arabidopsis thaliana OX=3702 GN=TET3 PE=1 SV=1	[more]
Q9LSS4	5.5e-113	67.39	Tetraspanin-4 OS=Arabidopsis thaliana OX=3702 GN=TET4 PE=3 SV=1	[more]
Q8S8Q6	2.4e-68	46.42	Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1	[more]
Q9M0B7	8.0e-64	45.04	Tetraspanin-9 OS=Arabidopsis thaliana OX=3702 GN=TET9 PE=2 SV=1	[more]
Q9FIQ5	1.2e-62	46.39	Protein TORNADO 2 OS=Arabidopsis thaliana OX=3702 GN=TRN2 PE=1 SV=1	[more]

BLAST of MS006856 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CJB4	6.9e-151	88.38	tetraspanin-3-like OS=Cucumis melo OX=3656 GN=LOC103501616 PE=4 SV=1	[more]
A0A6J1KDR8	9.0e-151	87.68	tetraspanin-3-like OS=Cucurbita maxima OX=3661 GN=LOC111493409 PE=4 SV=1	[more]
A0A6J1G9E4	1.3e-149	86.97	tetraspanin-3-like OS=Cucurbita moschata OX=3662 GN=LOC111452174 PE=4 SV=1	[more]
A0A0A0LS61	8.4e-149	86.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G089490 PE=4 SV=1	[more]
A0A6J1I2T9	4.3e-145	84.86	tetraspanin-3-like OS=Cucurbita maxima OX=3661 GN=LOC111469410 PE=3 SV=1	[more]

BLAST of MS006856 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G45600.1	2.4e-124	70.77	tetraspanin3	[more]
AT5G60220.1	3.9e-114	67.39	tetraspanin4	[more]
AT2G23810.1	1.7e-69	46.42	tetraspanin8	[more]
AT4G30430.1	5.7e-65	45.04	tetraspanin9	[more]
AT5G46700.1	8.2e-64	46.39	Tetraspanin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00259	TMFOUR	coord: 66..94 score: 14.45 coord: 6..29 score: 27.22 coord: 39..65 score: 26.16
None	No IPR available	PANTHER	PTHR32191:SF77	TETRASPANIN-3-LIKE	coord: 1..279
IPR018499	Tetraspanin/Peripherin	PFAM	PF00335	Tetraspanin	coord: 6..253 e-value: 9.5E-30 score: 104.0
IPR044991	Tetraspani, plant	PANTHER	PTHR32191	TETRASPANIN-8-RELATED	coord: 1..279

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS006856.1	MS006856.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
cellular_component	GO:0016021	integral component of membrane