MS006854 (gene) Bitter gourd (TR) v1

Overview
NameMS006854
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationscaffold871: 5418 .. 6755 (-)
RNA-Seq ExpressionMS006854
SyntenyMS006854
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGAACTTATTTTTGAACAGTGCACTGGTTGATTTATACGCCAAATGTAATGCCATCGTGGATGCAAAACGAGTCTTCTTTGGCATGAGAACTCACGATCAAGTTTCTTGGACTTCTATAATATCTGGACTTTCCCAAAATGGGCGTGGGAGCGAAGCCATCTTCATGTTTAAGGAAATGTTGGTAACTCAGGTTAGACCCAACTGTTTTACTTATGCCACCGTTATTAGTTCATGCCCAACACTAGAGGATGATCTTCAGCTTCGTCTTGCAAATTTGCTTCATGCTCATGTTATCAAATTTGGTTTTACATTTAGCAGTTTTGTTATTAGCTCCACTATTGATTGTTACTCAAAACTAGGAACAATAGAAGATGCTGCTCTGCTTTTTTATGAGACAAGAGTGAAGGATAATATCATATTTAATTCTATGATATCAGGGTATTCTCAAAACTTATATGGGGAAGAAGCATTGAAACTGTTTGTAGAAATGAGGTCTAGTAATTTGAGCCCAACTGATCATACATTAACCAGTGTTTTAAATGCTTGTGGAAGTCTAACAGTGCTTGAACAAGGAAGGCAAGTGCACTCTCTAGTTACAAAAATGGGATCAGAAAATAATGTGTTTGTGGTCTGTTCTTTGCTAGATATGTACTCAAAGTGCGGGAGTGTTGATGAGGCCTTCTTTATATTCAATCAGACGGTCGAAAAGAATAGCGTGTTGTCAACTTCGATGATCATGGCTTTTGCTCAATGTGGTAGAGGCTCAGATGCGTTAAAGCTCTTTGAGATTTTGTTGATTGAAGAAGGTTTCTTGCCAGATCATGTCTGTTTTACTGCAGTTTTGACTGCCTGCAATCATGCTGGATTTTTAGATGAGGCAATTGAATATTTCAATAAAATGGGCAGCGAATACGGATTAGATCCTCAAATCGATCATTATGCTTGTTTGATTGATCTCTATGCCAGAAATGGCCGCATAGAAAAAGCCAAGCAATTATTGGAGCAGATGCCTTATGAATCTAATTACGTCATGTGGTGTTCCCTATTAGGTGCTTGCAAAGTTCATGGCGAGGTCGAGCTCGGGAGGGAGGTCGCGTATCGACTCATTGAGATGGATCCAAGTAACGCTGCACCTTATGTTACACTTGCTCATATCTATGCTAGAGCTGGTTTGTGGGGTCAGGTGGGAGATATTAGAAAGAAGATGCAACAAGAAAAGGTAAGGAAAAGTGCAGGGTGGAGTTGGATTGAGATAGATAAGAAAGCTCATGTCTTCTCAGCTGGTGATGCAACTCATCCTAAATCCTTTGAGATTTATTCAAAACTTGATCAACTG

mRNA sequence

GAGAACTTATTTTTGAACAGTGCACTGGTTGATTTATACGCCAAATGTAATGCCATCGTGGATGCAAAACGAGTCTTCTTTGGCATGAGAACTCACGATCAAGTTTCTTGGACTTCTATAATATCTGGACTTTCCCAAAATGGGCGTGGGAGCGAAGCCATCTTCATGTTTAAGGAAATGTTGGTAACTCAGGTTAGACCCAACTGTTTTACTTATGCCACCGTTATTAGTTCATGCCCAACACTAGAGGATGATCTTCAGCTTCGTCTTGCAAATTTGCTTCATGCTCATGTTATCAAATTTGGTTTTACATTTAGCAGTTTTGTTATTAGCTCCACTATTGATTGTTACTCAAAACTAGGAACAATAGAAGATGCTGCTCTGCTTTTTTATGAGACAAGAGTGAAGGATAATATCATATTTAATTCTATGATATCAGGGTATTCTCAAAACTTATATGGGGAAGAAGCATTGAAACTGTTTGTAGAAATGAGGTCTAGTAATTTGAGCCCAACTGATCATACATTAACCAGTGTTTTAAATGCTTGTGGAAGTCTAACAGTGCTTGAACAAGGAAGGCAAGTGCACTCTCTAGTTACAAAAATGGGATCAGAAAATAATGTGTTTGTGGTCTGTTCTTTGCTAGATATGTACTCAAAGTGCGGGAGTGTTGATGAGGCCTTCTTTATATTCAATCAGACGGTCGAAAAGAATAGCGTGTTGTCAACTTCGATGATCATGGCTTTTGCTCAATGTGGTAGAGGCTCAGATGCGTTAAAGCTCTTTGAGATTTTGTTGATTGAAGAAGGTTTCTTGCCAGATCATGTCTGTTTTACTGCAGTTTTGACTGCCTGCAATCATGCTGGATTTTTAGATGAGGCAATTGAATATTTCAATAAAATGGGCAGCGAATACGGATTAGATCCTCAAATCGATCATTATGCTTGTTTGATTGATCTCTATGCCAGAAATGGCCGCATAGAAAAAGCCAAGCAATTATTGGAGCAGATGCCTTATGAATCTAATTACGTCATGTGGTGTTCCCTATTAGGTGCTTGCAAAGTTCATGGCGAGGTCGAGCTCGGGAGGGAGGTCGCGTATCGACTCATTGAGATGGATCCAAGTAACGCTGCACCTTATGTTACACTTGCTCATATCTATGCTAGAGCTGGTTTGTGGGGTCAGGTGGGAGATATTAGAAAGAAGATGCAACAAGAAAAGGTAAGGAAAAGTGCAGGGTGGAGTTGGATTGAGATAGATAAGAAAGCTCATGTCTTCTCAGCTGGTGATGCAACTCATCCTAAATCCTTTGAGATTTATTCAAAACTTGATCAACTG

Coding sequence (CDS)

GAGAACTTATTTTTGAACAGTGCACTGGTTGATTTATACGCCAAATGTAATGCCATCGTGGATGCAAAACGAGTCTTCTTTGGCATGAGAACTCACGATCAAGTTTCTTGGACTTCTATAATATCTGGACTTTCCCAAAATGGGCGTGGGAGCGAAGCCATCTTCATGTTTAAGGAAATGTTGGTAACTCAGGTTAGACCCAACTGTTTTACTTATGCCACCGTTATTAGTTCATGCCCAACACTAGAGGATGATCTTCAGCTTCGTCTTGCAAATTTGCTTCATGCTCATGTTATCAAATTTGGTTTTACATTTAGCAGTTTTGTTATTAGCTCCACTATTGATTGTTACTCAAAACTAGGAACAATAGAAGATGCTGCTCTGCTTTTTTATGAGACAAGAGTGAAGGATAATATCATATTTAATTCTATGATATCAGGGTATTCTCAAAACTTATATGGGGAAGAAGCATTGAAACTGTTTGTAGAAATGAGGTCTAGTAATTTGAGCCCAACTGATCATACATTAACCAGTGTTTTAAATGCTTGTGGAAGTCTAACAGTGCTTGAACAAGGAAGGCAAGTGCACTCTCTAGTTACAAAAATGGGATCAGAAAATAATGTGTTTGTGGTCTGTTCTTTGCTAGATATGTACTCAAAGTGCGGGAGTGTTGATGAGGCCTTCTTTATATTCAATCAGACGGTCGAAAAGAATAGCGTGTTGTCAACTTCGATGATCATGGCTTTTGCTCAATGTGGTAGAGGCTCAGATGCGTTAAAGCTCTTTGAGATTTTGTTGATTGAAGAAGGTTTCTTGCCAGATCATGTCTGTTTTACTGCAGTTTTGACTGCCTGCAATCATGCTGGATTTTTAGATGAGGCAATTGAATATTTCAATAAAATGGGCAGCGAATACGGATTAGATCCTCAAATCGATCATTATGCTTGTTTGATTGATCTCTATGCCAGAAATGGCCGCATAGAAAAAGCCAAGCAATTATTGGAGCAGATGCCTTATGAATCTAATTACGTCATGTGGTGTTCCCTATTAGGTGCTTGCAAAGTTCATGGCGAGGTCGAGCTCGGGAGGGAGGTCGCGTATCGACTCATTGAGATGGATCCAAGTAACGCTGCACCTTATGTTACACTTGCTCATATCTATGCTAGAGCTGGTTTGTGGGGTCAGGTGGGAGATATTAGAAAGAAGATGCAACAAGAAAAGGTAAGGAAAAGTGCAGGGTGGAGTTGGATTGAGATAGATAAGAAAGCTCATGTCTTCTCAGCTGGTGATGCAACTCATCCTAAATCCTTTGAGATTTATTCAAAACTTGATCAACTG

Protein sequence

ENLFLNSALVDLYAKCNAIVDAKRVFFGMRTHDQVSWTSIISGLSQNGRGSEAIFMFKEMLVTQVRPNCFTYATVISSCPTLEDDLQLRLANLLHAHVIKFGFTFSSFVISSTIDCYSKLGTIEDAALLFYETRVKDNIIFNSMISGYSQNLYGEEALKLFVEMRSSNLSPTDHTLTSVLNACGSLTVLEQGRQVHSLVTKMGSENNVFVVCSLLDMYSKCGSVDEAFFIFNQTVEKNSVLSTSMIMAFAQCGRGSDALKLFEILLIEEGFLPDHVCFTAVLTACNHAGFLDEAIEYFNKMGSEYGLDPQIDHYACLIDLYARNGRIEKAKQLLEQMPYESNYVMWCSLLGACKVHGEVELGREVAYRLIEMDPSNAAPYVTLAHIYARAGLWGQVGDIRKKMQQEKVRKSAGWSWIEIDKKAHVFSAGDATHPKSFEIYSKLDQL
Homology
BLAST of MS006854 vs. NCBI nr
Match: XP_022159320.1 (pentatricopeptide repeat-containing protein At2g13600-like [Momordica charantia] >XP_022159321.1 pentatricopeptide repeat-containing protein At2g13600-like [Momordica charantia])

HSP 1 Score: 878.6 bits (2269), Expect = 2.2e-251
Identity = 431/446 (96.64%), Postives = 438/446 (98.21%), Query Frame = 0

Query: 1   ENLFLNSALVDLYAKCNAIVDAKRVFFGMRTHDQVSWTSIISGLSQNGRGSEAIFMFKEM 60
           ENLFLNSALVDLYAKCNAIVDAKRVFFGMRTHDQVSWTS+ISGLS+NGRGSEAIFMFKEM
Sbjct: 43  ENLFLNSALVDLYAKCNAIVDAKRVFFGMRTHDQVSWTSJISGLSZNGRGSEAIFMFKEM 102

Query: 61  LVTQVRPNCFTYATVISSCPTLEDDLQLRLANLLHAHVIKFGFTFSSFVISSTIDCYSKL 120
           LVTQ RPNCFTYATVISSCPTLEDDLQLRLANLLHAHVIKFGFTFSSFVISSTIDCYSKL
Sbjct: 103 LVTQGRPNCFTYATVISSCPTLEDDLQLRLANLLHAHVIKFGFTFSSFVISSTIDCYSKL 162

Query: 121 GTIEDAALLFYETRVKDNIIFNSMISGYSQNLYGEEALKLFVEMRSSNLSPTDHTLTSVL 180
           G I DAALLFYETR KDNIIFNSMISGYSQNL+GEEALKLFVEMRSS+LSPTDHTLTSVL
Sbjct: 163 GRIGDAALLFYETRGKDNIIFNSMISGYSQNLHGEEALKLFVEMRSSSLSPTDHTLTSVL 222

Query: 181 NACGSLTVLEQGRQVHSLVTKMGSENNVFVVCSLLDMYSKCGSVDEAFFIFNQTVEKNSV 240
           NACGSLTVLEQGRQVHSLVTKMGSENNVFVVCSL+DMYSKCG VDEAFFIFNQ VEKNSV
Sbjct: 223 NACGSLTVLEQGRQVHSLVTKMGSENNVFVVCSLIDMYSKCGCVDEAFFIFNQMVEKNSV 282

Query: 241 LSTSMIMAFAQCGRGSDALKLFEILLIEEGFLPDHVCFTAVLTACNHAGFLDEAIEYFNK 300
           LSTSMIMAFAQCGRGSDALKLFEILLIEEGFLPDHVCFTAVLTACNHAGFLDEA+EYFNK
Sbjct: 283 LSTSMIMAFAQCGRGSDALKLFEILLIEEGFLPDHVCFTAVLTACNHAGFLDEAVEYFNK 342

Query: 301 MGSEYGLDPQIDHYACLIDLYARNGRIEKAKQLLEQMPYESNYVMWCSLLGACKVHGEVE 360
           MGSEYGLDPQIDHYACLIDLYARNG IEKAKQLLEQMPYESNYVMWCSLLGACKVHGEVE
Sbjct: 343 MGSEYGLDPQIDHYACLIDLYARNGHIEKAKQLLEQMPYESNYVMWCSLLGACKVHGEVE 402

Query: 361 LGREVAYRLIEMDPSNAAPYVTLAHIYARAGLWGQVGDIRKKMQQEKVRKSAGWSWIEID 420
           LGREVAYRLIEMDPSNAAPYVTLAHIYARAGLWGQVGDIRKKMQQEKVRKS GWSWIEID
Sbjct: 403 LGREVAYRLIEMDPSNAAPYVTLAHIYARAGLWGQVGDIRKKMQQEKVRKSXGWSWIEID 462

Query: 421 KKAHVFSAGDATHPKSFEIYSKLDQL 447
           KK+HVFSAGDATHPKSFEIYSKLDQL
Sbjct: 463 KKSHVFSAGDATHPKSFEIYSKLDQL 488

BLAST of MS006854 vs. NCBI nr
Match: XP_038896055.1 (pentatricopeptide repeat-containing protein At3g12770-like [Benincasa hispida])

HSP 1 Score: 811.2 bits (2094), Expect = 4.4e-231
Identity = 395/446 (88.57%), Postives = 420/446 (94.17%), Query Frame = 0

Query: 1   ENLFLNSALVDLYAKCNAIVDAKRVFFGMRTHDQVSWTSIISGLSQNGRGSEAIFMFKEM 60
           ENLFLNS+LVDLY+KCNAIV+AKRVF  M+THDQVSWTSIISGLSQNG GSEAI MFK M
Sbjct: 43  ENLFLNSSLVDLYSKCNAIVNAKRVFSHMKTHDQVSWTSIISGLSQNGCGSEAILMFKNM 102

Query: 61  LVTQVRPNCFTYATVISSCPTLEDDLQLRLANLLHAHVIKFGFTFSSFVISSTIDCYSKL 120
           LVTQVRPNCFTYATVISSC TL+D+LQ+ LA LLHAHVIK GFTFS+FVISSTIDCYSKL
Sbjct: 103 LVTQVRPNCFTYATVISSCLTLKDELQIHLATLLHAHVIKLGFTFSNFVISSTIDCYSKL 162

Query: 121 GTIEDAALLFYETRVKDNIIFNSMISGYSQNLYGEEALKLFVEMRSSNLSPTDHTLTSVL 180
           G +++AALLFYET VKDNIIFNSMISGYSQNLYGEEALKLFVEMR+SNLSPTDHTLTSVL
Sbjct: 163 GRVQEAALLFYETTVKDNIIFNSMISGYSQNLYGEEALKLFVEMRASNLSPTDHTLTSVL 222

Query: 181 NACGSLTVLEQGRQVHSLVTKMGSENNVFVVCSLLDMYSKCGSVDEAFFIFNQTVEKNSV 240
           NACG LTVLEQGRQVHSLVTKMGSENNVFVVCSLLDMYSKCGSVDEAFF+FNQT+EKNSV
Sbjct: 223 NACGCLTVLEQGRQVHSLVTKMGSENNVFVVCSLLDMYSKCGSVDEAFFLFNQTLEKNSV 282

Query: 241 LSTSMIMAFAQCGRGSDALKLFEILLIEEGFLPDHVCFTAVLTACNHAGFLDEAIEYFNK 300
           LSTSMIMAFAQCGRGS+ALKLFE LL EEGFLPDHVCF AVLTACNHAG L+EA+EYFNK
Sbjct: 283 LSTSMIMAFAQCGRGSEALKLFESLLTEEGFLPDHVCFNAVLTACNHAGLLNEAVEYFNK 342

Query: 301 MGSEYGLDPQIDHYACLIDLYARNGRIEKAKQLLEQMPYESNYVMWCSLLGACKVHGEVE 360
           M  EY LDPQIDHYACLIDLYARNG +EKAKQL+EQMPYESNYVMWCSLLGACKVH EVE
Sbjct: 343 MSCEYRLDPQIDHYACLIDLYARNGHVEKAKQLMEQMPYESNYVMWCSLLGACKVHEEVE 402

Query: 361 LGREVAYRLIEMDPSNAAPYVTLAHIYARAGLWGQVGDIRKKMQQEKVRKSAGWSWIEID 420
           LGREVAY+LIEMDPSNAAPYVTLAHIYARAGLW Q+G+IRK+MQQ++VRKSAGWSWIEID
Sbjct: 403 LGREVAYQLIEMDPSNAAPYVTLAHIYARAGLWTQLGEIRKEMQQKRVRKSAGWSWIEID 462

Query: 421 KKAHVFSAGDATHPKSFEIYSKLDQL 447
           KK HVFS GDA HPKS EIYSKLDQL
Sbjct: 463 KKIHVFSVGDAAHPKSCEIYSKLDQL 488

BLAST of MS006854 vs. NCBI nr
Match: XP_008464861.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis melo] >KAA0051921.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK12241.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 798.5 bits (2061), Expect = 2.9e-227
Identity = 387/446 (86.77%), Postives = 417/446 (93.50%), Query Frame = 0

Query: 1   ENLFLNSALVDLYAKCNAIVDAKRVFFGMRTHDQVSWTSIISGLSQNGRGSEAIFMFKEM 60
           ENLFLNS+LVDLY+KCNAIV+AKRVF  M+THDQVSWTSIISGLSQNG GSEAI MFK+M
Sbjct: 43  ENLFLNSSLVDLYSKCNAIVNAKRVFSRMKTHDQVSWTSIISGLSQNGCGSEAILMFKKM 102

Query: 61  LVTQVRPNCFTYATVISSCPTLEDDLQLRLANLLHAHVIKFGFTFSSFVISSTIDCYSKL 120
           LVTQVRPNCFTYATVISSCPTL+++LQ+ LA LLHAHVIKFGFTFSSFVISSTIDCYSKL
Sbjct: 103 LVTQVRPNCFTYATVISSCPTLKNELQIHLATLLHAHVIKFGFTFSSFVISSTIDCYSKL 162

Query: 121 GTIEDAALLFYETRVKDNIIFNSMISGYSQNLYGEEALKLFVEMRSSNLSPTDHTLTSVL 180
           G I++A+LLF ET VKDNIIFNSMISGYSQNL GEEALKLFVEMR+SNLSPTDHTLTSVL
Sbjct: 163 GRIQEASLLFSETSVKDNIIFNSMISGYSQNLCGEEALKLFVEMRASNLSPTDHTLTSVL 222

Query: 181 NACGSLTVLEQGRQVHSLVTKMGSENNVFVVCSLLDMYSKCGSVDEAFFIFNQTVEKNSV 240
           NACG LTVLEQGRQVHSL+TKMGSENNVFVVCSLLDMYSKCGS+DEAF +FNQTV+KNSV
Sbjct: 223 NACGCLTVLEQGRQVHSLLTKMGSENNVFVVCSLLDMYSKCGSIDEAFSLFNQTVQKNSV 282

Query: 241 LSTSMIMAFAQCGRGSDALKLFEILLIEEGFLPDHVCFTAVLTACNHAGFLDEAIEYFNK 300
           LSTSMIMAFAQCGRG +ALKLFE L  E+ F+PDH+CFTAVLTACNHAG LDEA+EYFNK
Sbjct: 283 LSTSMIMAFAQCGRGLEALKLFECLSTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNK 342

Query: 301 MGSEYGLDPQIDHYACLIDLYARNGRIEKAKQLLEQMPYESNYVMWCSLLGACKVHGEVE 360
           M  EY LDPQIDHYACLIDLYARNG +EKAKQ++EQMPYESNYVMWCSLLGACKVH EVE
Sbjct: 343 MRCEYQLDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYVMWCSLLGACKVHAEVE 402

Query: 361 LGREVAYRLIEMDPSNAAPYVTLAHIYARAGLWGQVGDIRKKMQQEKVRKSAGWSWIEID 420
           LGREVAYRLIEMDP NAAPY+TLAHIYARAGLW QVG+IRK+MQQ++VRKSAGWSWIEID
Sbjct: 403 LGREVAYRLIEMDPRNAAPYLTLAHIYARAGLWTQVGEIRKEMQQKRVRKSAGWSWIEID 462

Query: 421 KKAHVFSAGDATHPKSFEIYSKLDQL 447
           KK HVFS GDA HPKS EIYSKLDQL
Sbjct: 463 KKTHVFSVGDAAHPKSCEIYSKLDQL 488

BLAST of MS006854 vs. NCBI nr
Match: XP_022948515.1 (pentatricopeptide repeat-containing protein At2g13600-like [Cucurbita moschata])

HSP 1 Score: 796.2 bits (2055), Expect = 1.5e-226
Identity = 388/447 (86.80%), Postives = 414/447 (92.62%), Query Frame = 0

Query: 1   ENLFLNSALVDLYAKCNAIVDAKRVFFGMRTHDQVSWTSIISGLSQNGRGSEAIFMFKEM 60
           +NL+LNS LV+LY+KCNAIVDAKR+F  M+THDQVSWTSIISGLSQNG G EAI MFK M
Sbjct: 43  DNLYLNSGLVNLYSKCNAIVDAKRIFVHMKTHDQVSWTSIISGLSQNGAGREAILMFKNM 102

Query: 61  LVTQVRPNCFTYATVISSCPTLEDDLQLRLANLLHAHVIKFGFT-FSSFVISSTIDCYSK 120
           LVTQ RPNCFTYATVISSCP+L+D+L + L  L HAHVIK GF  FSSFVISS IDCYSK
Sbjct: 103 LVTQDRPNCFTYATVISSCPSLKDELPIHLTTLFHAHVIKLGFLFFSSFVISSAIDCYSK 162

Query: 121 LGTIEDAALLFYETRVKDNIIFNSMISGYSQNLYGEEALKLFVEMRSSNLSPTDHTLTSV 180
           LG IE+AALLFYE  VKDN+IFNSMISG+SQNLYGEEALKLFVEMR+SNLSPTDHTLTSV
Sbjct: 163 LGRIEEAALLFYEANVKDNVIFNSMISGFSQNLYGEEALKLFVEMRASNLSPTDHTLTSV 222

Query: 181 LNACGSLTVLEQGRQVHSLVTKMGSENNVFVVCSLLDMYSKCGSVDEAFFIFNQTVEKNS 240
           LNACGSLTVLEQGRQVHSLVTKMGSENNVFVVCSLLDMYSKCGSVD+AF IFNQTVEKNS
Sbjct: 223 LNACGSLTVLEQGRQVHSLVTKMGSENNVFVVCSLLDMYSKCGSVDDAFIIFNQTVEKNS 282

Query: 241 VLSTSMIMAFAQCGRGSDALKLFEILLIEEGFLPDHVCFTAVLTACNHAGFLDEAIEYFN 300
           VLSTSMIMAFAQCGRGSDALKLFE LL EEGFLPDHVCFTAVLTACNHAG L+EA+EYFN
Sbjct: 283 VLSTSMIMAFAQCGRGSDALKLFESLLTEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFN 342

Query: 301 KMGSEYGLDPQIDHYACLIDLYARNGRIEKAKQLLEQMPYESNYVMWCSLLGACKVHGEV 360
           KMGSEY LDPQIDHYACLIDLYARNG +EKAK+L+E+MPYESNYVMWCSLLGACKVH EV
Sbjct: 343 KMGSEYRLDPQIDHYACLIDLYARNGHVEKAKELMEKMPYESNYVMWCSLLGACKVHVEV 402

Query: 361 ELGREVAYRLIEMDPSNAAPYVTLAHIYARAGLWGQVGDIRKKMQQEKVRKSAGWSWIEI 420
           ELGREVAYRLIEMDP NAAPYVTLAHIYARAGLW Q+ DIR +MQQ++VRKSAGWSWIEI
Sbjct: 403 ELGREVAYRLIEMDPGNAAPYVTLAHIYARAGLWTQLADIRNQMQQKRVRKSAGWSWIEI 462

Query: 421 DKKAHVFSAGDATHPKSFEIYSKLDQL 447
           DKKAHVFS GDATHPKS EIYSKL+QL
Sbjct: 463 DKKAHVFSVGDATHPKSCEIYSKLNQL 489

BLAST of MS006854 vs. NCBI nr
Match: KAG6607175.1 (Tetraspanin-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 794.3 bits (2050), Expect = 5.5e-226
Identity = 387/447 (86.58%), Postives = 414/447 (92.62%), Query Frame = 0

Query: 1   ENLFLNSALVDLYAKCNAIVDAKRVFFGMRTHDQVSWTSIISGLSQNGRGSEAIFMFKEM 60
           +NL+LNS LV+LY+KCNAIVDAKR+F  M+THDQVSWTSIISGLSQNG G EAI MFK M
Sbjct: 347 DNLYLNSGLVNLYSKCNAIVDAKRIFVHMKTHDQVSWTSIISGLSQNGAGREAILMFKNM 406

Query: 61  LVTQVRPNCFTYATVISSCPTLEDDLQLRLANLLHAHVIKFGFT-FSSFVISSTIDCYSK 120
           LVTQ RPNC+TYATVISSCP+L+D+L   L  L HAHVIK GF  FSSFVISS IDCYSK
Sbjct: 407 LVTQDRPNCYTYATVISSCPSLKDELPNHLTTLFHAHVIKLGFLFFSSFVISSAIDCYSK 466

Query: 121 LGTIEDAALLFYETRVKDNIIFNSMISGYSQNLYGEEALKLFVEMRSSNLSPTDHTLTSV 180
           LG IE+AALLFYE  VKDN+IFNSMISG+SQNLYGEEALKLFVEMR+SNLSPTDHTLTSV
Sbjct: 467 LGRIEEAALLFYEANVKDNVIFNSMISGFSQNLYGEEALKLFVEMRASNLSPTDHTLTSV 526

Query: 181 LNACGSLTVLEQGRQVHSLVTKMGSENNVFVVCSLLDMYSKCGSVDEAFFIFNQTVEKNS 240
           LNACGSLTVLEQGRQVHSLVTKMGSENNVFVVCSLLDMYSKCGSVD+AF IFNQTVEKNS
Sbjct: 527 LNACGSLTVLEQGRQVHSLVTKMGSENNVFVVCSLLDMYSKCGSVDDAFIIFNQTVEKNS 586

Query: 241 VLSTSMIMAFAQCGRGSDALKLFEILLIEEGFLPDHVCFTAVLTACNHAGFLDEAIEYFN 300
           VLSTSMIMAFAQCGRGSDALKLFE LL EEGFLPDHVCFTAVLTACNHAG L+EA+EYFN
Sbjct: 587 VLSTSMIMAFAQCGRGSDALKLFESLLTEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFN 646

Query: 301 KMGSEYGLDPQIDHYACLIDLYARNGRIEKAKQLLEQMPYESNYVMWCSLLGACKVHGEV 360
           KMGSEY LDPQIDHYACLIDLYARNG +EKAK+L+E+MPYESNYVMWCSLLGACKVH +V
Sbjct: 647 KMGSEYRLDPQIDHYACLIDLYARNGHVEKAKELMEKMPYESNYVMWCSLLGACKVHVKV 706

Query: 361 ELGREVAYRLIEMDPSNAAPYVTLAHIYARAGLWGQVGDIRKKMQQEKVRKSAGWSWIEI 420
           ELGREVAYRLIEMDP NAAPYVTLAHIYARAGLW Q+ DIRK+MQQ++VRKSAGWSWIEI
Sbjct: 707 ELGREVAYRLIEMDPGNAAPYVTLAHIYARAGLWAQLADIRKQMQQKRVRKSAGWSWIEI 766

Query: 421 DKKAHVFSAGDATHPKSFEIYSKLDQL 447
           DKKAHVFS GDATHPKS EIYSKL+QL
Sbjct: 767 DKKAHVFSVGDATHPKSCEIYSKLNQL 793

BLAST of MS006854 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 1.8e-94
Identity = 183/483 (37.89%), Postives = 289/483 (59.83%), Query Frame = 0

Query: 2   NLFLNSALVDLYAKCNAIVDAKRVFFGMRTHDQVSWTSIISGLSQNGRGSEAIFMFKEML 61
           ++++ SALVD+Y+KC  + DA+RVF  M   + VSW S+I+   QNG   EA+ +F+ ML
Sbjct: 186 DVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMML 245

Query: 62  VTQVRPNCFTYATVISSCPTLEDDLQLRLANLLHAHVIKFGFTFSSFVISST-IDCYSKL 121
            ++V P+  T A+VIS+C +L     +++   +H  V+K     +  ++S+  +D Y+K 
Sbjct: 246 ESRVEPDEVTLASVISACASLS---AIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKC 305

Query: 122 GTIEDAALLFYETRVKD------------------------------NII-FNSMISGYS 181
             I++A  +F    +++                              N++ +N++I+GY+
Sbjct: 306 SRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYT 365

Query: 182 QNLYGEEALKLFVEMRSSNLSPTDHTLTSVLNACGSLTVLEQGRQVHSLVTK------MG 241
           QN   EEAL LF  ++  ++ PT ++  ++L AC  L  L  G Q H  V K       G
Sbjct: 366 QNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSG 425

Query: 242 SENNVFVVCSLLDMYSKCGSVDEAFFIFNQTVEKNSVLSTSMIMAFAQCGRGSDALKLFE 301
            E+++FV  SL+DMY KCG V+E + +F + +E++ V   +MI+ FAQ G G++AL+LF 
Sbjct: 426 EEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFR 485

Query: 302 ILLIEEGFLPDHVCFTAVLTACNHAGFLDEAIEYFNKMGSEYGLDPQIDHYACLIDLYAR 361
            +L E G  PDH+    VL+AC HAGF++E   YF+ M  ++G+ P  DHY C++DL  R
Sbjct: 486 EML-ESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGR 545

Query: 362 NGRIEKAKQLLEQMPYESNYVMWCSLLGACKVHGEVELGREVAYRLIEMDPSNAAPYVTL 421
            G +E+AK ++E+MP + + V+W SLL ACKVH  + LG+ VA +L+E++PSN+ PYV L
Sbjct: 546 AGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLL 605

Query: 422 AHIYARAGLWGQVGDIRKKMQQEKVRKSAGWSWIEIDKKAHVFSAGDATHPKSFEIYSKL 447
           +++YA  G W  V ++RK M++E V K  G SWI+I    HVF   D +HP+  +I+S L
Sbjct: 606 SNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLL 664

BLAST of MS006854 vs. ExPASy Swiss-Prot
Match: Q9FWA6 (Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E90 PE=2 SV=2)

HSP 1 Score: 335.1 bits (858), Expect = 1.2e-90
Identity = 161/458 (35.15%), Postives = 276/458 (60.26%), Query Frame = 0

Query: 7   SALVDLYAKCNAIVDAKRVFFGMRTHDQVSWTSIISGLSQNGRGSEAIFMFKEMLVTQVR 66
           +A +D+Y KC A+ +A RVF  MR  D VSW +II+   QNG+G E +F+F  ML +++ 
Sbjct: 421 NAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIE 480

Query: 67  PNCFTYATVISSCPTLEDDLQLRLANLLHAHVIKFGFTFSSFVISSTIDCYSKLGTIEDA 126
           P+ FT+ +++ +C        L     +H+ ++K G   +S V  S ID YSK G IE+A
Sbjct: 481 PDEFTFGSILKAC----TGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEA 540

Query: 127 ALL-------------------FYETRVKDNII-FNSMISGYSQNLYGEEALKLFVEMRS 186
             +                    +  R+++  + +NS+ISGY      E+A  LF  M  
Sbjct: 541 EKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMME 600

Query: 187 SNLSPTDHTLTSVLNACGSLTVLEQGRQVHSLVTKMGSENNVFVVCSLLDMYSKCGSVDE 246
             ++P   T  +VL+ C +L     G+Q+H+ V K   +++V++  +L+DMYSKCG + +
Sbjct: 601 MGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHD 660

Query: 247 AFFIFNQTVEKNSVLSTSMIMAFAQCGRGSDALKLFEILLIEEGFLPDHVCFTAVLTACN 306
           +  +F +++ ++ V   +MI  +A  G+G +A++LFE +++ E   P+HV F ++L AC 
Sbjct: 661 SRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMIL-ENIKPNHVTFISILRACA 720

Query: 307 HAGFLDEAIEYFNKMGSEYGLDPQIDHYACLIDLYARNGRIEKAKQLLEQMPYESNYVMW 366
           H G +D+ +EYF  M  +YGLDPQ+ HY+ ++D+  ++G++++A +L+ +MP+E++ V+W
Sbjct: 721 HMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIW 780

Query: 367 CSLLGACKVH-GEVELGREVAYRLIEMDPSNAAPYVTLAHIYARAGLWGQVGDIRKKMQQ 426
            +LLG C +H   VE+  E    L+ +DP +++ Y  L+++YA AG+W +V D+R+ M+ 
Sbjct: 781 RTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRG 840

Query: 427 EKVRKSAGWSWIEIDKKAHVFSAGDATHPKSFEIYSKL 444
            K++K  G SW+E+  + HVF  GD  HP+  EIY +L
Sbjct: 841 FKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEEL 873

BLAST of MS006854 vs. ExPASy Swiss-Prot
Match: Q9STS9 (Putative pentatricopeptide repeat-containing protein At3g47840 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E43 PE=3 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 2.1e-87
Identity = 174/442 (39.37%), Postives = 261/442 (59.05%), Query Frame = 0

Query: 3   LFLNSALVDLYAKCNAIVDAKRVFFGMRTHDQVSWTSIISGLSQNGRGSEAIFMFKEMLV 62
           L + ++L  +Y +C  + D   +F  M   D VSWTS+I    + G+  +A+  F +M  
Sbjct: 244 LCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRN 303

Query: 63  TQVRPNCFTYATVISSCPTLEDDLQLRLANLLHAHVIKFGFTFSSFVISSTIDCYSKLGT 122
           +QV PN  T+A++ S+C +L    +L     LH +V+  G   S  V +S +  YS  G 
Sbjct: 304 SQVPPNEQTFASMFSACASLS---RLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGN 363

Query: 123 IEDAALLFYETRVKDNIIFNSMISGYSQNLYGEEALKLFVEMRSSNLSPTDHTLTSVLNA 182
           +  A++LF   R +D I ++++I GY Q  +GEE  K F  MR S   PTD  L S+L+ 
Sbjct: 364 LVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSV 423

Query: 183 CGSLTVLEQGRQVHSLVTKMGSENNVFVVCSLLDMYSKCGSVDEAFFIFNQTVEKNSVLS 242
            G++ V+E GRQVH+L    G E N  V  SL++MYSKCGS+ EA  IF +T   + V  
Sbjct: 424 SGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSL 483

Query: 243 TSMIMAFAQCGRGSDALKLFEILLIEEGFLPDHVCFTAVLTACNHAGFLDEAIEYFNKMG 302
           T+MI  +A+ G+  +A+ LFE  L + GF PD V F +VLTAC H+G LD    YFN M 
Sbjct: 484 TAMINGYAEHGKSKEAIDLFEKSL-KVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQ 543

Query: 303 SEYGLDPQIDHYACLIDLYARNGRIEKAKQLLEQMPYESNYVMWCSLLGACKVHGEVELG 362
             Y + P  +HY C++DL  R GR+  A++++ +M ++ + V+W +LL ACK  G++E G
Sbjct: 544 ETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERG 603

Query: 363 REVAYRLIEMDPSNAAPYVTLAHIYARAGLWGQVGDIRKKMQQEKVRKSAGWSWIEIDKK 422
           R  A R++E+DP+ A   VTLA+IY+  G   +  ++RK M+ + V K  GWS I+I   
Sbjct: 604 RRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDC 663

Query: 423 AHVFSAGDATHPKSFEIYSKLD 445
              F +GD  HP+S +IY+ L+
Sbjct: 664 VSAFVSGDRFHPQSEDIYNILE 681

BLAST of MS006854 vs. ExPASy Swiss-Prot
Match: Q9SI53 (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H44 PE=2 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 2.8e-87
Identity = 170/444 (38.29%), Postives = 263/444 (59.23%), Query Frame = 0

Query: 3   LFLNSALVDLYAKCNAIVDAKRVFFGMRTHDQVSWTSIISGLSQNGRGSEAIFMFKEMLV 62
           +FL + L+++Y K N + DA ++F  M   + +SWT++IS  S+     +A+ +   ML 
Sbjct: 96  MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155

Query: 63  TQVRPNCFTYATVISSCPTLEDDLQLRLANLLHAHVIKFGFTFSSFVISSTIDCYSKLGT 122
             VRPN +TY++V+ SC  + D        +LH  +IK G     FV S+ ID ++KLG 
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSD------VRMLHCGIIKEGLESDVFVRSALIDVFAKLGE 215

Query: 123 IEDAALLFYETRVKDNIIFNSMISGYSQNLYGEEALKLFVEMRSSNLSPTDHTLTSVLNA 182
            EDA  +F E    D I++NS+I G++QN   + AL+LF  M+ +       TLTSVL A
Sbjct: 216 PEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRA 275

Query: 183 CGSLTVLEQGRQVHSLVTKMGSENNVFVVCSLLDMYSKCGSVDEAFFIFNQTVEKNSVLS 242
           C  L +LE G Q H  + K   + ++ +  +L+DMY KCGS+++A  +FNQ  E++ +  
Sbjct: 276 CTGLALLELGMQAHVHIVKY--DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITW 335

Query: 243 TSMIMAFAQCGRGSDALKLFEILLIEEGFLPDHVCFTAVLTACNHAGFLDEAIEYFNKMG 302
           ++MI   AQ G   +ALKLFE  +   G  P+++    VL AC+HAG L++   YF  M 
Sbjct: 336 STMISGLAQNGYSQEALKLFE-RMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMK 395

Query: 303 SEYGLDPQIDHYACLIDLYARNGRIEKAKQLLEQMPYESNYVMWCSLLGACKVHGEVELG 362
             YG+DP  +HY C+IDL  + G+++ A +LL +M  E + V W +LLGAC+V   + L 
Sbjct: 396 KLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLA 455

Query: 363 REVAYRLIEMDPSNAAPYVTLAHIYARAGLWGQVGDIRKKMQQEKVRKSAGWSWIEIDKK 422
              A ++I +DP +A  Y  L++IYA +  W  V +IR +M+   ++K  G SWIE++K+
Sbjct: 456 EYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQ 515

Query: 423 AHVFSAGDATHPKSFEIYSKLDQL 447
            H F  GD +HP+  E+  KL+QL
Sbjct: 516 IHAFIIGDNSHPQIVEVSKKLNQL 530

BLAST of MS006854 vs. ExPASy Swiss-Prot
Match: Q5G1T1 (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2261 PE=2 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 3.4e-85
Identity = 162/444 (36.49%), Postives = 259/444 (58.33%), Query Frame = 0

Query: 8   ALVDLYAKCNA---IVDAKRVFFGMRTHDQVSWTSIISGLSQN-GRGSEAIFMFKEMLVT 67
           +LVD+YAKC+A   + D ++VF  M  H  +SWT++I+G  +N    +EAI +F EM+  
Sbjct: 307 SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQ 366

Query: 68  -QVRPNCFTYATVISSCPTLEDDLQLRLANLLHAHVIKFGFTFSSFVISSTIDCYSKLGT 127
             V PN FT+++   +C  L D    R+   +     K G   +S V +S I  + K   
Sbjct: 367 GHVEPNHFTFSSAFKACGNLSDP---RVGKQVLGQAFKRGLASNSSVANSVISMFVKSDR 426

Query: 128 IEDAALLFYETRVKDNIIFNSMISGYSQNLYGEEALKLFVEMRSSNLSPTDHTLTSVLNA 187
           +EDA   F     K+ + +N+ + G  +NL  E+A KL  E+    L  +  T  S+L+ 
Sbjct: 427 MEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSG 486

Query: 188 CGSLTVLEQGRQVHSLVTKMGSENNVFVVCSLLDMYSKCGSVDEAFFIFNQTVEKNSVLS 247
             ++  + +G Q+HS V K+G   N  V  +L+ MYSKCGS+D A  +FN    +N +  
Sbjct: 487 VANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISW 546

Query: 248 TSMIMAFAQCGRGSDALKLFEILLIEEGFLPDHVCFTAVLTACNHAGFLDEAIEYFNKMG 307
           TSMI  FA+ G     L+ F   +IEEG  P+ V + A+L+AC+H G + E   +FN M 
Sbjct: 547 TSMITGFAKHGFAIRVLETFN-QMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMY 606

Query: 308 SEYGLDPQIDHYACLIDLYARNGRIEKAKQLLEQMPYESNYVMWCSLLGACKVHGEVELG 367
            ++ + P+++HYAC++DL  R G +  A + +  MP++++ ++W + LGAC+VH   ELG
Sbjct: 607 EDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELG 666

Query: 368 REVAYRLIEMDPSNAAPYVTLAHIYARAGLWGQVGDIRKKMQQEKVRKSAGWSWIEIDKK 427
           +  A +++E+DP+  A Y+ L++IYA AG W +  ++R+KM++  + K  G SWIE+  K
Sbjct: 667 KLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDK 726

Query: 428 AHVFSAGDATHPKSFEIYSKLDQL 447
            H F  GD  HP + +IY +LD+L
Sbjct: 727 IHKFYVGDTAHPNAHQIYDELDRL 746

BLAST of MS006854 vs. ExPASy TrEMBL
Match: A0A6J1DYD1 (pentatricopeptide repeat-containing protein At2g13600-like OS=Momordica charantia OX=3673 GN=LOC111025730 PE=4 SV=1)

HSP 1 Score: 877.5 bits (2266), Expect = 2.4e-251
Identity = 431/446 (96.64%), Postives = 438/446 (98.21%), Query Frame = 0

Query: 1   ENLFLNSALVDLYAKCNAIVDAKRVFFGMRTHDQVSWTSIISGLSQNGRGSEAIFMFKEM 60
           ENLFLNSALVDLYAKCNAIVDAKRVFFGMRTHDQVSWTS+ISGLS+NGRGSEAIFMFKEM
Sbjct: 43  ENLFLNSALVDLYAKCNAIVDAKRVFFGMRTHDQVSWTSLISGLSENGRGSEAIFMFKEM 102

Query: 61  LVTQVRPNCFTYATVISSCPTLEDDLQLRLANLLHAHVIKFGFTFSSFVISSTIDCYSKL 120
           LVTQ RPNCFTYATVISSCPTLEDDLQLRLANLLHAHVIKFGFTFSSFVISSTIDCYSKL
Sbjct: 103 LVTQGRPNCFTYATVISSCPTLEDDLQLRLANLLHAHVIKFGFTFSSFVISSTIDCYSKL 162

Query: 121 GTIEDAALLFYETRVKDNIIFNSMISGYSQNLYGEEALKLFVEMRSSNLSPTDHTLTSVL 180
           G I DAALLFYETR KDNIIFNSMISGYSQNL+GEEALKLFVEMRSS+LSPTDHTLTSVL
Sbjct: 163 GRIGDAALLFYETRGKDNIIFNSMISGYSQNLHGEEALKLFVEMRSSSLSPTDHTLTSVL 222

Query: 181 NACGSLTVLEQGRQVHSLVTKMGSENNVFVVCSLLDMYSKCGSVDEAFFIFNQTVEKNSV 240
           NACGSLTVLEQGRQVHSLVTKMGSENNVFVVCSL+DMYSKCG VDEAFFIFNQ VEKNSV
Sbjct: 223 NACGSLTVLEQGRQVHSLVTKMGSENNVFVVCSLIDMYSKCGCVDEAFFIFNQMVEKNSV 282

Query: 241 LSTSMIMAFAQCGRGSDALKLFEILLIEEGFLPDHVCFTAVLTACNHAGFLDEAIEYFNK 300
           LSTSMIMAFAQCGRGSDALKLFEILLIEEGFLPDHVCFTAVLTACNHAGFLDEA+EYFNK
Sbjct: 283 LSTSMIMAFAQCGRGSDALKLFEILLIEEGFLPDHVCFTAVLTACNHAGFLDEAVEYFNK 342

Query: 301 MGSEYGLDPQIDHYACLIDLYARNGRIEKAKQLLEQMPYESNYVMWCSLLGACKVHGEVE 360
           MGSEYGLDPQIDHYACLIDLYARNG IEKAKQLLEQMPYESNYVMWCSLLGACKVHGEVE
Sbjct: 343 MGSEYGLDPQIDHYACLIDLYARNGHIEKAKQLLEQMPYESNYVMWCSLLGACKVHGEVE 402

Query: 361 LGREVAYRLIEMDPSNAAPYVTLAHIYARAGLWGQVGDIRKKMQQEKVRKSAGWSWIEID 420
           LGREVAYRLIEMDPSNAAPYVTLAHIYARAGLWGQVGDIRKKMQQEKVRKS GWSWIEID
Sbjct: 403 LGREVAYRLIEMDPSNAAPYVTLAHIYARAGLWGQVGDIRKKMQQEKVRKSXGWSWIEID 462

Query: 421 KKAHVFSAGDATHPKSFEIYSKLDQL 447
           KK+HVFSAGDATHPKSFEIYSKLDQL
Sbjct: 463 KKSHVFSAGDATHPKSFEIYSKLDQL 488

BLAST of MS006854 vs. ExPASy TrEMBL
Match: A0A5A7UEE6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold769G00490 PE=4 SV=1)

HSP 1 Score: 798.5 bits (2061), Expect = 1.4e-227
Identity = 387/446 (86.77%), Postives = 417/446 (93.50%), Query Frame = 0

Query: 1   ENLFLNSALVDLYAKCNAIVDAKRVFFGMRTHDQVSWTSIISGLSQNGRGSEAIFMFKEM 60
           ENLFLNS+LVDLY+KCNAIV+AKRVF  M+THDQVSWTSIISGLSQNG GSEAI MFK+M
Sbjct: 43  ENLFLNSSLVDLYSKCNAIVNAKRVFSRMKTHDQVSWTSIISGLSQNGCGSEAILMFKKM 102

Query: 61  LVTQVRPNCFTYATVISSCPTLEDDLQLRLANLLHAHVIKFGFTFSSFVISSTIDCYSKL 120
           LVTQVRPNCFTYATVISSCPTL+++LQ+ LA LLHAHVIKFGFTFSSFVISSTIDCYSKL
Sbjct: 103 LVTQVRPNCFTYATVISSCPTLKNELQIHLATLLHAHVIKFGFTFSSFVISSTIDCYSKL 162

Query: 121 GTIEDAALLFYETRVKDNIIFNSMISGYSQNLYGEEALKLFVEMRSSNLSPTDHTLTSVL 180
           G I++A+LLF ET VKDNIIFNSMISGYSQNL GEEALKLFVEMR+SNLSPTDHTLTSVL
Sbjct: 163 GRIQEASLLFSETSVKDNIIFNSMISGYSQNLCGEEALKLFVEMRASNLSPTDHTLTSVL 222

Query: 181 NACGSLTVLEQGRQVHSLVTKMGSENNVFVVCSLLDMYSKCGSVDEAFFIFNQTVEKNSV 240
           NACG LTVLEQGRQVHSL+TKMGSENNVFVVCSLLDMYSKCGS+DEAF +FNQTV+KNSV
Sbjct: 223 NACGCLTVLEQGRQVHSLLTKMGSENNVFVVCSLLDMYSKCGSIDEAFSLFNQTVQKNSV 282

Query: 241 LSTSMIMAFAQCGRGSDALKLFEILLIEEGFLPDHVCFTAVLTACNHAGFLDEAIEYFNK 300
           LSTSMIMAFAQCGRG +ALKLFE L  E+ F+PDH+CFTAVLTACNHAG LDEA+EYFNK
Sbjct: 283 LSTSMIMAFAQCGRGLEALKLFECLSTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNK 342

Query: 301 MGSEYGLDPQIDHYACLIDLYARNGRIEKAKQLLEQMPYESNYVMWCSLLGACKVHGEVE 360
           M  EY LDPQIDHYACLIDLYARNG +EKAKQ++EQMPYESNYVMWCSLLGACKVH EVE
Sbjct: 343 MRCEYQLDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYVMWCSLLGACKVHAEVE 402

Query: 361 LGREVAYRLIEMDPSNAAPYVTLAHIYARAGLWGQVGDIRKKMQQEKVRKSAGWSWIEID 420
           LGREVAYRLIEMDP NAAPY+TLAHIYARAGLW QVG+IRK+MQQ++VRKSAGWSWIEID
Sbjct: 403 LGREVAYRLIEMDPRNAAPYLTLAHIYARAGLWTQVGEIRKEMQQKRVRKSAGWSWIEID 462

Query: 421 KKAHVFSAGDATHPKSFEIYSKLDQL 447
           KK HVFS GDA HPKS EIYSKLDQL
Sbjct: 463 KKTHVFSVGDAAHPKSCEIYSKLDQL 488

BLAST of MS006854 vs. ExPASy TrEMBL
Match: A0A1S3CML0 (pentatricopeptide repeat-containing protein At2g13600-like OS=Cucumis melo OX=3656 GN=LOC103502628 PE=4 SV=1)

HSP 1 Score: 798.5 bits (2061), Expect = 1.4e-227
Identity = 387/446 (86.77%), Postives = 417/446 (93.50%), Query Frame = 0

Query: 1   ENLFLNSALVDLYAKCNAIVDAKRVFFGMRTHDQVSWTSIISGLSQNGRGSEAIFMFKEM 60
           ENLFLNS+LVDLY+KCNAIV+AKRVF  M+THDQVSWTSIISGLSQNG GSEAI MFK+M
Sbjct: 43  ENLFLNSSLVDLYSKCNAIVNAKRVFSRMKTHDQVSWTSIISGLSQNGCGSEAILMFKKM 102

Query: 61  LVTQVRPNCFTYATVISSCPTLEDDLQLRLANLLHAHVIKFGFTFSSFVISSTIDCYSKL 120
           LVTQVRPNCFTYATVISSCPTL+++LQ+ LA LLHAHVIKFGFTFSSFVISSTIDCYSKL
Sbjct: 103 LVTQVRPNCFTYATVISSCPTLKNELQIHLATLLHAHVIKFGFTFSSFVISSTIDCYSKL 162

Query: 121 GTIEDAALLFYETRVKDNIIFNSMISGYSQNLYGEEALKLFVEMRSSNLSPTDHTLTSVL 180
           G I++A+LLF ET VKDNIIFNSMISGYSQNL GEEALKLFVEMR+SNLSPTDHTLTSVL
Sbjct: 163 GRIQEASLLFSETSVKDNIIFNSMISGYSQNLCGEEALKLFVEMRASNLSPTDHTLTSVL 222

Query: 181 NACGSLTVLEQGRQVHSLVTKMGSENNVFVVCSLLDMYSKCGSVDEAFFIFNQTVEKNSV 240
           NACG LTVLEQGRQVHSL+TKMGSENNVFVVCSLLDMYSKCGS+DEAF +FNQTV+KNSV
Sbjct: 223 NACGCLTVLEQGRQVHSLLTKMGSENNVFVVCSLLDMYSKCGSIDEAFSLFNQTVQKNSV 282

Query: 241 LSTSMIMAFAQCGRGSDALKLFEILLIEEGFLPDHVCFTAVLTACNHAGFLDEAIEYFNK 300
           LSTSMIMAFAQCGRG +ALKLFE L  E+ F+PDH+CFTAVLTACNHAG LDEA+EYFNK
Sbjct: 283 LSTSMIMAFAQCGRGLEALKLFECLSTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNK 342

Query: 301 MGSEYGLDPQIDHYACLIDLYARNGRIEKAKQLLEQMPYESNYVMWCSLLGACKVHGEVE 360
           M  EY LDPQIDHYACLIDLYARNG +EKAKQ++EQMPYESNYVMWCSLLGACKVH EVE
Sbjct: 343 MRCEYQLDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYVMWCSLLGACKVHAEVE 402

Query: 361 LGREVAYRLIEMDPSNAAPYVTLAHIYARAGLWGQVGDIRKKMQQEKVRKSAGWSWIEID 420
           LGREVAYRLIEMDP NAAPY+TLAHIYARAGLW QVG+IRK+MQQ++VRKSAGWSWIEID
Sbjct: 403 LGREVAYRLIEMDPRNAAPYLTLAHIYARAGLWTQVGEIRKEMQQKRVRKSAGWSWIEID 462

Query: 421 KKAHVFSAGDATHPKSFEIYSKLDQL 447
           KK HVFS GDA HPKS EIYSKLDQL
Sbjct: 463 KKTHVFSVGDAAHPKSCEIYSKLDQL 488

BLAST of MS006854 vs. ExPASy TrEMBL
Match: A0A6J1GA23 (pentatricopeptide repeat-containing protein At2g13600-like OS=Cucurbita moschata OX=3662 GN=LOC111452173 PE=4 SV=1)

HSP 1 Score: 796.2 bits (2055), Expect = 7.0e-227
Identity = 388/447 (86.80%), Postives = 414/447 (92.62%), Query Frame = 0

Query: 1   ENLFLNSALVDLYAKCNAIVDAKRVFFGMRTHDQVSWTSIISGLSQNGRGSEAIFMFKEM 60
           +NL+LNS LV+LY+KCNAIVDAKR+F  M+THDQVSWTSIISGLSQNG G EAI MFK M
Sbjct: 43  DNLYLNSGLVNLYSKCNAIVDAKRIFVHMKTHDQVSWTSIISGLSQNGAGREAILMFKNM 102

Query: 61  LVTQVRPNCFTYATVISSCPTLEDDLQLRLANLLHAHVIKFGFT-FSSFVISSTIDCYSK 120
           LVTQ RPNCFTYATVISSCP+L+D+L + L  L HAHVIK GF  FSSFVISS IDCYSK
Sbjct: 103 LVTQDRPNCFTYATVISSCPSLKDELPIHLTTLFHAHVIKLGFLFFSSFVISSAIDCYSK 162

Query: 121 LGTIEDAALLFYETRVKDNIIFNSMISGYSQNLYGEEALKLFVEMRSSNLSPTDHTLTSV 180
           LG IE+AALLFYE  VKDN+IFNSMISG+SQNLYGEEALKLFVEMR+SNLSPTDHTLTSV
Sbjct: 163 LGRIEEAALLFYEANVKDNVIFNSMISGFSQNLYGEEALKLFVEMRASNLSPTDHTLTSV 222

Query: 181 LNACGSLTVLEQGRQVHSLVTKMGSENNVFVVCSLLDMYSKCGSVDEAFFIFNQTVEKNS 240
           LNACGSLTVLEQGRQVHSLVTKMGSENNVFVVCSLLDMYSKCGSVD+AF IFNQTVEKNS
Sbjct: 223 LNACGSLTVLEQGRQVHSLVTKMGSENNVFVVCSLLDMYSKCGSVDDAFIIFNQTVEKNS 282

Query: 241 VLSTSMIMAFAQCGRGSDALKLFEILLIEEGFLPDHVCFTAVLTACNHAGFLDEAIEYFN 300
           VLSTSMIMAFAQCGRGSDALKLFE LL EEGFLPDHVCFTAVLTACNHAG L+EA+EYFN
Sbjct: 283 VLSTSMIMAFAQCGRGSDALKLFESLLTEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFN 342

Query: 301 KMGSEYGLDPQIDHYACLIDLYARNGRIEKAKQLLEQMPYESNYVMWCSLLGACKVHGEV 360
           KMGSEY LDPQIDHYACLIDLYARNG +EKAK+L+E+MPYESNYVMWCSLLGACKVH EV
Sbjct: 343 KMGSEYRLDPQIDHYACLIDLYARNGHVEKAKELMEKMPYESNYVMWCSLLGACKVHVEV 402

Query: 361 ELGREVAYRLIEMDPSNAAPYVTLAHIYARAGLWGQVGDIRKKMQQEKVRKSAGWSWIEI 420
           ELGREVAYRLIEMDP NAAPYVTLAHIYARAGLW Q+ DIR +MQQ++VRKSAGWSWIEI
Sbjct: 403 ELGREVAYRLIEMDPGNAAPYVTLAHIYARAGLWTQLADIRNQMQQKRVRKSAGWSWIEI 462

Query: 421 DKKAHVFSAGDATHPKSFEIYSKLDQL 447
           DKKAHVFS GDATHPKS EIYSKL+QL
Sbjct: 463 DKKAHVFSVGDATHPKSCEIYSKLNQL 489

BLAST of MS006854 vs. ExPASy TrEMBL
Match: A0A6J1K975 (pentatricopeptide repeat-containing protein At2g13600-like OS=Cucurbita maxima OX=3661 GN=LOC111493402 PE=4 SV=1)

HSP 1 Score: 793.1 bits (2047), Expect = 6.0e-226
Identity = 388/447 (86.80%), Postives = 414/447 (92.62%), Query Frame = 0

Query: 1   ENLFLNSALVDLYAKCNAIVDAKRVFFGMRTHDQVSWTSIISGLSQNGRGSEAIFMFKEM 60
           +NL+LNS LV+LY+KCNAIVDAKR+F  M+THDQVSWTSIISGLSQNG G EAI MFK M
Sbjct: 43  DNLYLNSGLVNLYSKCNAIVDAKRIFVHMKTHDQVSWTSIISGLSQNGAGREAILMFKNM 102

Query: 61  LVTQVRPNCFTYATVISSCPTLEDDLQLRLANLLHAHVIKFGFT-FSSFVISSTIDCYSK 120
           LVTQ RPNCFTYATVISSCP+L+D+L   L  L HAHVIK GF  FSSFVISS IDCYSK
Sbjct: 103 LVTQDRPNCFTYATVISSCPSLKDELPNHLTTLFHAHVIKLGFIFFSSFVISSAIDCYSK 162

Query: 121 LGTIEDAALLFYETRVKDNIIFNSMISGYSQNLYGEEALKLFVEMRSSNLSPTDHTLTSV 180
           LG IE+AALLFYE  VKDN+IFNSMISG+SQNLYGEEALKLFVEMR+SNLS TDHTLTSV
Sbjct: 163 LGRIEEAALLFYEANVKDNVIFNSMISGFSQNLYGEEALKLFVEMRASNLSSTDHTLTSV 222

Query: 181 LNACGSLTVLEQGRQVHSLVTKMGSENNVFVVCSLLDMYSKCGSVDEAFFIFNQTVEKNS 240
           LNACGSLTVLEQGRQVHSLVTKMGSENNVFVVCSLLDMYSKCGSVD+AF IFNQTVEKNS
Sbjct: 223 LNACGSLTVLEQGRQVHSLVTKMGSENNVFVVCSLLDMYSKCGSVDDAFIIFNQTVEKNS 282

Query: 241 VLSTSMIMAFAQCGRGSDALKLFEILLIEEGFLPDHVCFTAVLTACNHAGFLDEAIEYFN 300
           VLSTSMIMAFAQCGRGSDALKLFE LL EEGFLPDHVCFTAVLTACNHAG L+EA+EYFN
Sbjct: 283 VLSTSMIMAFAQCGRGSDALKLFESLLTEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFN 342

Query: 301 KMGSEYGLDPQIDHYACLIDLYARNGRIEKAKQLLEQMPYESNYVMWCSLLGACKVHGEV 360
           KMGSEY LDPQIDHYACLIDLYARNG +EKAK+L+E++PYESNYVMWCSLLGACKVH EV
Sbjct: 343 KMGSEYRLDPQIDHYACLIDLYARNGHVEKAKELMEKIPYESNYVMWCSLLGACKVHVEV 402

Query: 361 ELGREVAYRLIEMDPSNAAPYVTLAHIYARAGLWGQVGDIRKKMQQEKVRKSAGWSWIEI 420
           ELGREVAYRLIEMDPSNAAPYVTLAHIYARAGLW Q+ DIRK+MQQ++VRKSAGWSWIEI
Sbjct: 403 ELGREVAYRLIEMDPSNAAPYVTLAHIYARAGLWTQLADIRKQMQQKRVRKSAGWSWIEI 462

Query: 421 DKKAHVFSAGDATHPKSFEIYSKLDQL 447
           DKKAHVFS GDATHPKS EIYSKL+QL
Sbjct: 463 DKKAHVFSVGDATHPKSCEIYSKLNQL 489

BLAST of MS006854 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 347.8 bits (891), Expect = 1.3e-95
Identity = 183/483 (37.89%), Postives = 289/483 (59.83%), Query Frame = 0

Query: 2   NLFLNSALVDLYAKCNAIVDAKRVFFGMRTHDQVSWTSIISGLSQNGRGSEAIFMFKEML 61
           ++++ SALVD+Y+KC  + DA+RVF  M   + VSW S+I+   QNG   EA+ +F+ ML
Sbjct: 186 DVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMML 245

Query: 62  VTQVRPNCFTYATVISSCPTLEDDLQLRLANLLHAHVIKFGFTFSSFVISST-IDCYSKL 121
            ++V P+  T A+VIS+C +L     +++   +H  V+K     +  ++S+  +D Y+K 
Sbjct: 246 ESRVEPDEVTLASVISACASLS---AIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKC 305

Query: 122 GTIEDAALLFYETRVKD------------------------------NII-FNSMISGYS 181
             I++A  +F    +++                              N++ +N++I+GY+
Sbjct: 306 SRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYT 365

Query: 182 QNLYGEEALKLFVEMRSSNLSPTDHTLTSVLNACGSLTVLEQGRQVHSLVTK------MG 241
           QN   EEAL LF  ++  ++ PT ++  ++L AC  L  L  G Q H  V K       G
Sbjct: 366 QNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSG 425

Query: 242 SENNVFVVCSLLDMYSKCGSVDEAFFIFNQTVEKNSVLSTSMIMAFAQCGRGSDALKLFE 301
            E+++FV  SL+DMY KCG V+E + +F + +E++ V   +MI+ FAQ G G++AL+LF 
Sbjct: 426 EEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFR 485

Query: 302 ILLIEEGFLPDHVCFTAVLTACNHAGFLDEAIEYFNKMGSEYGLDPQIDHYACLIDLYAR 361
            +L E G  PDH+    VL+AC HAGF++E   YF+ M  ++G+ P  DHY C++DL  R
Sbjct: 486 EML-ESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGR 545

Query: 362 NGRIEKAKQLLEQMPYESNYVMWCSLLGACKVHGEVELGREVAYRLIEMDPSNAAPYVTL 421
            G +E+AK ++E+MP + + V+W SLL ACKVH  + LG+ VA +L+E++PSN+ PYV L
Sbjct: 546 AGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLL 605

Query: 422 AHIYARAGLWGQVGDIRKKMQQEKVRKSAGWSWIEIDKKAHVFSAGDATHPKSFEIYSKL 447
           +++YA  G W  V ++RK M++E V K  G SWI+I    HVF   D +HP+  +I+S L
Sbjct: 606 SNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLL 664

BLAST of MS006854 vs. TAIR 10
Match: AT3G02330.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 335.1 bits (858), Expect = 8.6e-92
Identity = 161/458 (35.15%), Postives = 276/458 (60.26%), Query Frame = 0

Query: 7   SALVDLYAKCNAIVDAKRVFFGMRTHDQVSWTSIISGLSQNGRGSEAIFMFKEMLVTQVR 66
           +A +D+Y KC A+ +A RVF  MR  D VSW +II+   QNG+G E +F+F  ML +++ 
Sbjct: 421 NAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIE 480

Query: 67  PNCFTYATVISSCPTLEDDLQLRLANLLHAHVIKFGFTFSSFVISSTIDCYSKLGTIEDA 126
           P+ FT+ +++ +C        L     +H+ ++K G   +S V  S ID YSK G IE+A
Sbjct: 481 PDEFTFGSILKAC----TGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEA 540

Query: 127 ALL-------------------FYETRVKDNII-FNSMISGYSQNLYGEEALKLFVEMRS 186
             +                    +  R+++  + +NS+ISGY      E+A  LF  M  
Sbjct: 541 EKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMME 600

Query: 187 SNLSPTDHTLTSVLNACGSLTVLEQGRQVHSLVTKMGSENNVFVVCSLLDMYSKCGSVDE 246
             ++P   T  +VL+ C +L     G+Q+H+ V K   +++V++  +L+DMYSKCG + +
Sbjct: 601 MGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHD 660

Query: 247 AFFIFNQTVEKNSVLSTSMIMAFAQCGRGSDALKLFEILLIEEGFLPDHVCFTAVLTACN 306
           +  +F +++ ++ V   +MI  +A  G+G +A++LFE +++ E   P+HV F ++L AC 
Sbjct: 661 SRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMIL-ENIKPNHVTFISILRACA 720

Query: 307 HAGFLDEAIEYFNKMGSEYGLDPQIDHYACLIDLYARNGRIEKAKQLLEQMPYESNYVMW 366
           H G +D+ +EYF  M  +YGLDPQ+ HY+ ++D+  ++G++++A +L+ +MP+E++ V+W
Sbjct: 721 HMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIW 780

Query: 367 CSLLGACKVH-GEVELGREVAYRLIEMDPSNAAPYVTLAHIYARAGLWGQVGDIRKKMQQ 426
            +LLG C +H   VE+  E    L+ +DP +++ Y  L+++YA AG+W +V D+R+ M+ 
Sbjct: 781 RTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRG 840

Query: 427 EKVRKSAGWSWIEIDKKAHVFSAGDATHPKSFEIYSKL 444
            K++K  G SW+E+  + HVF  GD  HP+  EIY +L
Sbjct: 841 FKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEEL 873

BLAST of MS006854 vs. TAIR 10
Match: AT3G47840.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 324.3 bits (830), Expect = 1.5e-88
Identity = 174/442 (39.37%), Postives = 261/442 (59.05%), Query Frame = 0

Query: 3   LFLNSALVDLYAKCNAIVDAKRVFFGMRTHDQVSWTSIISGLSQNGRGSEAIFMFKEMLV 62
           L + ++L  +Y +C  + D   +F  M   D VSWTS+I    + G+  +A+  F +M  
Sbjct: 244 LCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRN 303

Query: 63  TQVRPNCFTYATVISSCPTLEDDLQLRLANLLHAHVIKFGFTFSSFVISSTIDCYSKLGT 122
           +QV PN  T+A++ S+C +L    +L     LH +V+  G   S  V +S +  YS  G 
Sbjct: 304 SQVPPNEQTFASMFSACASLS---RLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGN 363

Query: 123 IEDAALLFYETRVKDNIIFNSMISGYSQNLYGEEALKLFVEMRSSNLSPTDHTLTSVLNA 182
           +  A++LF   R +D I ++++I GY Q  +GEE  K F  MR S   PTD  L S+L+ 
Sbjct: 364 LVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSV 423

Query: 183 CGSLTVLEQGRQVHSLVTKMGSENNVFVVCSLLDMYSKCGSVDEAFFIFNQTVEKNSVLS 242
            G++ V+E GRQVH+L    G E N  V  SL++MYSKCGS+ EA  IF +T   + V  
Sbjct: 424 SGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSL 483

Query: 243 TSMIMAFAQCGRGSDALKLFEILLIEEGFLPDHVCFTAVLTACNHAGFLDEAIEYFNKMG 302
           T+MI  +A+ G+  +A+ LFE  L + GF PD V F +VLTAC H+G LD    YFN M 
Sbjct: 484 TAMINGYAEHGKSKEAIDLFEKSL-KVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQ 543

Query: 303 SEYGLDPQIDHYACLIDLYARNGRIEKAKQLLEQMPYESNYVMWCSLLGACKVHGEVELG 362
             Y + P  +HY C++DL  R GR+  A++++ +M ++ + V+W +LL ACK  G++E G
Sbjct: 544 ETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERG 603

Query: 363 REVAYRLIEMDPSNAAPYVTLAHIYARAGLWGQVGDIRKKMQQEKVRKSAGWSWIEIDKK 422
           R  A R++E+DP+ A   VTLA+IY+  G   +  ++RK M+ + V K  GWS I+I   
Sbjct: 604 RRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDC 663

Query: 423 AHVFSAGDATHPKSFEIYSKLD 445
              F +GD  HP+S +IY+ L+
Sbjct: 664 VSAFVSGDRFHPQSEDIYNILE 681

BLAST of MS006854 vs. TAIR 10
Match: AT2G03880.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 323.9 bits (829), Expect = 2.0e-88
Identity = 170/444 (38.29%), Postives = 263/444 (59.23%), Query Frame = 0

Query: 3   LFLNSALVDLYAKCNAIVDAKRVFFGMRTHDQVSWTSIISGLSQNGRGSEAIFMFKEMLV 62
           +FL + L+++Y K N + DA ++F  M   + +SWT++IS  S+     +A+ +   ML 
Sbjct: 96  MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155

Query: 63  TQVRPNCFTYATVISSCPTLEDDLQLRLANLLHAHVIKFGFTFSSFVISSTIDCYSKLGT 122
             VRPN +TY++V+ SC  + D        +LH  +IK G     FV S+ ID ++KLG 
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSD------VRMLHCGIIKEGLESDVFVRSALIDVFAKLGE 215

Query: 123 IEDAALLFYETRVKDNIIFNSMISGYSQNLYGEEALKLFVEMRSSNLSPTDHTLTSVLNA 182
            EDA  +F E    D I++NS+I G++QN   + AL+LF  M+ +       TLTSVL A
Sbjct: 216 PEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRA 275

Query: 183 CGSLTVLEQGRQVHSLVTKMGSENNVFVVCSLLDMYSKCGSVDEAFFIFNQTVEKNSVLS 242
           C  L +LE G Q H  + K   + ++ +  +L+DMY KCGS+++A  +FNQ  E++ +  
Sbjct: 276 CTGLALLELGMQAHVHIVKY--DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITW 335

Query: 243 TSMIMAFAQCGRGSDALKLFEILLIEEGFLPDHVCFTAVLTACNHAGFLDEAIEYFNKMG 302
           ++MI   AQ G   +ALKLFE  +   G  P+++    VL AC+HAG L++   YF  M 
Sbjct: 336 STMISGLAQNGYSQEALKLFE-RMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMK 395

Query: 303 SEYGLDPQIDHYACLIDLYARNGRIEKAKQLLEQMPYESNYVMWCSLLGACKVHGEVELG 362
             YG+DP  +HY C+IDL  + G+++ A +LL +M  E + V W +LLGAC+V   + L 
Sbjct: 396 KLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLA 455

Query: 363 REVAYRLIEMDPSNAAPYVTLAHIYARAGLWGQVGDIRKKMQQEKVRKSAGWSWIEIDKK 422
              A ++I +DP +A  Y  L++IYA +  W  V +IR +M+   ++K  G SWIE++K+
Sbjct: 456 EYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQ 515

Query: 423 AHVFSAGDATHPKSFEIYSKLDQL 447
            H F  GD +HP+  E+  KL+QL
Sbjct: 516 IHAFIIGDNSHPQIVEVSKKLNQL 530

BLAST of MS006854 vs. TAIR 10
Match: AT3G49170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 317.0 bits (811), Expect = 2.4e-86
Identity = 162/444 (36.49%), Postives = 259/444 (58.33%), Query Frame = 0

Query: 8   ALVDLYAKCNA---IVDAKRVFFGMRTHDQVSWTSIISGLSQN-GRGSEAIFMFKEMLVT 67
           +LVD+YAKC+A   + D ++VF  M  H  +SWT++I+G  +N    +EAI +F EM+  
Sbjct: 307 SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQ 366

Query: 68  -QVRPNCFTYATVISSCPTLEDDLQLRLANLLHAHVIKFGFTFSSFVISSTIDCYSKLGT 127
             V PN FT+++   +C  L D    R+   +     K G   +S V +S I  + K   
Sbjct: 367 GHVEPNHFTFSSAFKACGNLSDP---RVGKQVLGQAFKRGLASNSSVANSVISMFVKSDR 426

Query: 128 IEDAALLFYETRVKDNIIFNSMISGYSQNLYGEEALKLFVEMRSSNLSPTDHTLTSVLNA 187
           +EDA   F     K+ + +N+ + G  +NL  E+A KL  E+    L  +  T  S+L+ 
Sbjct: 427 MEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSG 486

Query: 188 CGSLTVLEQGRQVHSLVTKMGSENNVFVVCSLLDMYSKCGSVDEAFFIFNQTVEKNSVLS 247
             ++  + +G Q+HS V K+G   N  V  +L+ MYSKCGS+D A  +FN    +N +  
Sbjct: 487 VANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISW 546

Query: 248 TSMIMAFAQCGRGSDALKLFEILLIEEGFLPDHVCFTAVLTACNHAGFLDEAIEYFNKMG 307
           TSMI  FA+ G     L+ F   +IEEG  P+ V + A+L+AC+H G + E   +FN M 
Sbjct: 547 TSMITGFAKHGFAIRVLETFN-QMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMY 606

Query: 308 SEYGLDPQIDHYACLIDLYARNGRIEKAKQLLEQMPYESNYVMWCSLLGACKVHGEVELG 367
            ++ + P+++HYAC++DL  R G +  A + +  MP++++ ++W + LGAC+VH   ELG
Sbjct: 607 EDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELG 666

Query: 368 REVAYRLIEMDPSNAAPYVTLAHIYARAGLWGQVGDIRKKMQQEKVRKSAGWSWIEIDKK 427
           +  A +++E+DP+  A Y+ L++IYA AG W +  ++R+KM++  + K  G SWIE+  K
Sbjct: 667 KLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDK 726

Query: 428 AHVFSAGDATHPKSFEIYSKLDQL 447
            H F  GD  HP + +IY +LD+L
Sbjct: 727 IHKFYVGDTAHPNAHQIYDELDRL 746

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022159320.12.2e-25196.64pentatricopeptide repeat-containing protein At2g13600-like [Momordica charantia]... [more]
XP_038896055.14.4e-23188.57pentatricopeptide repeat-containing protein At3g12770-like [Benincasa hispida][more]
XP_008464861.12.9e-22786.77PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis m... [more]
XP_022948515.11.5e-22686.80pentatricopeptide repeat-containing protein At2g13600-like [Cucurbita moschata][more]
KAG6607175.15.5e-22686.58Tetraspanin-3, partial [Cucurbita argyrosperma subsp. sororia][more]
Match NameE-valueIdentityDescription
Q9SIT71.8e-9437.89Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX... [more]
Q9FWA61.2e-9035.15Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidop... [more]
Q9STS92.1e-8739.37Putative pentatricopeptide repeat-containing protein At3g47840 OS=Arabidopsis th... [more]
Q9SI532.8e-8738.29Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidop... [more]
Q5G1T13.4e-8536.49Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1DYD12.4e-25196.64pentatricopeptide repeat-containing protein At2g13600-like OS=Momordica charanti... [more]
A0A5A7UEE61.4e-22786.77Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3CML01.4e-22786.77pentatricopeptide repeat-containing protein At2g13600-like OS=Cucumis melo OX=36... [more]
A0A6J1GA237.0e-22786.80pentatricopeptide repeat-containing protein At2g13600-like OS=Cucurbita moschata... [more]
A0A6J1K9756.0e-22686.80pentatricopeptide repeat-containing protein At2g13600-like OS=Cucurbita maxima O... [more]
Match NameE-valueIdentityDescription
AT2G13600.11.3e-9537.89Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G02330.18.6e-9235.15Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G47840.11.5e-8839.37Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G03880.12.0e-8838.29Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G49170.12.4e-8636.49Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..87
e-value: 1.2E-17
score: 65.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 267..429
e-value: 8.7E-28
score: 99.6
coord: 155..266
e-value: 1.4E-21
score: 79.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 208..395
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 137..183
e-value: 3.7E-11
score: 43.0
coord: 33..79
e-value: 6.6E-10
score: 39.0
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 212..237
e-value: 0.021
score: 15.1
coord: 243..263
e-value: 0.0057
score: 16.8
coord: 276..302
e-value: 7.2E-4
score: 19.6
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 314..342
e-value: 1.1E-5
score: 23.3
coord: 276..309
e-value: 4.1E-4
score: 18.3
coord: 35..69
e-value: 3.9E-6
score: 24.7
coord: 140..172
e-value: 1.2E-6
score: 26.3
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 306..337
e-value: 1.4E-5
score: 24.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 310..340
score: 8.527949
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 238..273
score: 8.780059
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 137..171
score: 11.268274
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 33..67
score: 11.027125
NoneNo IPR availablePANTHERPTHR24015:SF1753PPR CONTAINING PLANT-LIKE PROTEINcoord: 5..420
NoneNo IPR availablePANTHERPTHR24015OS07G0578800 PROTEIN-RELATEDcoord: 5..420

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS006854.1MS006854.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding