MS006776 (gene) Bitter gourd (TR) v1

Overview


Name	MS006776
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	syndetin isoform X2
Location	scaffold60: 304703 .. 318544 (+)
RNA-Seq Expression	MS006776
Synteny	MS006776

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCCGGTATTGAGTGAGCTTCGTCATGCTGTGGACATGCAATCAATGCTCGAATCTCTTGTTGAAGAGGGAAATTATTACAAGGTGGGTTTCAGAACTTGCTTCTTATTATACCTTTTCTAGTTGAGCTGTGAGTGTCTGACTTAGATGTACATTTCTGGAGTAATGATGTCTGCTTATTAACTTTTCTAGCTGTGCTGCCGAACATGCCTGCTATACAGGCTTTTCAGGTCCTGTCTGAGTATTTGCAGCTATTGGATAGCATTTCAGAGCTTTCAGTAATTCAAGACATGAGCCGTGGCGTAGAAGTGAGTATTTTCTATGATAGGGAGCATTGGCAGTTGCAAGAATCATCTGTATATAGTGTTCTCCCATGGAAACCTTTTGGTATAATGTCTGGTTTATGATGCATTTATATATCTGTTTTTACAAAATATTGTAGGTTTGGCTGGGAAGAGCCCTGCAAAAGTTGGATTCACTATTGATAGAAGTCTGCCAGGAGTTCAAGAAGGAGGGTTATTTAACCGTGAGGACTCTTTTCCTGTGATAGAAAATTTTTTTTCCTACTTCCTCCCCTTTCCGAAATTGTTCATTCTTGAAGCATTCGATCTTGATTTGTATGCTTTTTAAACTGGATTATATAAAAAATCATGGTAGATATTACTGGATACTTCTCTGTATTTCTAGTGCATTGAAAAATACATTCACATTTTTTTTTCCTACATCTAGAGAGTTGTGGATGAACTTTTTTGTGTTAAGAAATGGCTCGAAAGGTTCTCTTAGCTATGTCTTTGGCTGCAGTCTATCTCATTTTTGCTGCAAAGTTGAAGTCATAGCAATTTTTGGCAGTGAGGATATTACTATTTTTTCTGAAGGAAAAAAAAAACATTAATTAATGAAAAGAAGCAATAAATATTCAAGGGTACAATATATATATATTTTAATACGAAACAACGCTTTCATTGAGAAAATGAAAAGAAGAACAAGGACATACAAAAAACAACCCTATAAGAGAACGGCCACGGAAGAAAATGGCTCCAATCCAAACGAATAACACTTAATTGATAATTACAAAAGGCCTTACAGAATCCCACAAGGAAGTATGAAACCTAATAAGATCCTAAACAAACTTCACTGATCTCTCTACCCCCTAAAAATTCTATTGTTCCTCTCCAGCCAAATCCGCCACAATGTGGCCAAAAAGCAAGTTTGCCACAAAAAACGACCCCTATCTTGAAATGGAGAAAATAACAACACCTCCTCCAACATCGGCCTACAATCCCTACCGTGGGCCAAAGACATCCCAAAACTTCCAAAGAACCGAAGCCATAAATTCTGCGAAATTGACAAGACCACAACAGGTAATCAAGATCCTCCGAGCTCCTATGCAAAGCAGACACCATTGCTGGCCCAGACATAAAGAAGACTACCTCTGAATACAATCCTTTGGGAGTGAAAAAAGAAACAAACTAGATACGGAATATGAATGCCCCCAATTCGTACAAATATCATTAAAAGAATAATTTGTGAATAAAGGAGAAATAAAACACTAATGAGAAGATTTAATCTAGACTAAATCAAACCGTTCTTGCCAAGCTAAATGGTTATCTTAAAAAATCTTCACATTTCGTTCAAACTGAACTTTGGAAATGATGGCCTTGATAGCATTAGCCTAAATCAATTTAGCTTTAGGTTGCAATTAAGGTCCATATAACAGCTGATTGATGTTTTCTCTAGAGTCACAGTCAAATGACAGAAGTCTTCTCCTATCAGAAACAAATAGAAAATAATTGGGTTGAGGTGTCATTATGAGGGAAGAGTTGAGGAGTCTTTACTGTCAATTTTGTTAATACCAATGGTAAGAATAGTAAGAACAACAATAAGATGGTGCAGCGGAAGGGTGATGGTCCCGTAAACCATAGGTCGAGGATAGGGCAGTAAATAAATAAGTTGTGATGCTAAAGCTCTTCCCAAGACTATTTCTAAGTTCCAAAGACTTGATGTGAGTCTCATCGCTAATAAATTGAAAACTCCCAGAGGAAAAATAAGAAAGGCATTATGTTATAGTCGGATCTCCGCTTGTATCTCATCCACGAGCTTCTCCATAATCATTATTGGCAATCAAAGAGGCAAATTCAAAGCTTCTAAGAATATCCTTCTATTTCCTATTCTTTTTATTCTAATGGTGGACCAACTTAGTAGGTTGCTAACACAAGGATCCTCTGTAGGCTTTATCAATGGTTTCTCCATTGTTAATGGATCTATGAATATCGACTATCTTTATTTGTGGATTTGAGAGAGTAAAAAATATTATGATATATTCAAACATGTAACTTAGGTCTTCTTATATAGGAGAATGACCTACTACAGACAAGGAAAACAATAAATACCATAAAGACTAAATATCAACAATAAAGACTAAATATTAACAACTAATATTGACAACTAATATTTACACAAATATTGATAAATCCAACACTCCCCCTCAAGCTGGTTTGAAGATGTCGTCCATAGCCAGCTTGCTGATTAAATTGTCGAATTGTTTCTTTGGAAGTCCCTTAGTTAAAACATCGGCAATTTGCTTTGTTGTCGGAAGACAAGGGATACATATTGTACCTGCATCAATCTTCTCTTTAATAAAATGTTTGTCAACCTCGATATGTTTGGTTCGGTCATGTAGCACAAGGTTATGAGCTATAGATATGGCAGACTTATTGTCACAATAAATCCGTATAGGTGTCGGCTGAGGAATCTTCAATTCTTCAAGCATCCTTTTAATCCATATACCTTCACAAATTCCATGAGCCAATGCTCTAAACTCTGCTTCAGCACTACTCCTGGCCACTACGTTTTGTTTTTTGCTCCTCCATGTAACTAGATTTCCTCCAACAAAGGAACAATAACCAGAAGTAGATCTTCTATCGGTAGTACTTCCAGCCTAATTTGCATCAGTATAAACTTCTACTTGAAAGTTGTTATTCTTTTCGAATAAAATACCTTTTCCAGGAGTTCCCTTCAAATATCTCAAGATTCTGTAGACAGCTTCAAAATGAATTGGTCCAGGTGCATGCATGAATTGACTTACCATACTTACAGTAAATGCAATATTTGGTCGTGTATGTGACAGATAAATTAATCTTCCCACGAGTCTATGGTATTGTTCCCTATCCTTTATTTCTTCTGCGTTTGCTGCTTGTAATTTCAAATTAGGTTCAATAGGAGTTTCTGCGATCCTGAAACCAAGCAATCCTGTTTCTCCATGTAAGTCAAGAACATATTTTCTTTGATCAACGAATATACCTTTCTTCGAACTTGTGAATTCCACTCTTAGAAAATATTTTAATGTTCCCAAGTCCTTGATTTGAAACTCATTTGCCAGATTTTTCTTAAGACCAGCTAGTCCTGCTCCATCATCACCAATGAGAATAATATCATCTACATAGACAATCAAAATTGACATTTTATTATTCTCAGAGTGTTTATAAAATATAGTATGGTTAGCTTGAATCTGAAGAAATCCATAACTCGATATGACTTTTTCGAATCGTTCGAACCAAGCTCTAGGAGACTGTTTGAGGCCATAGAGAGATTTCTTTAACCTGCAGATTTTATTCCATTCGAGTTCTTTTTCAAAACCTGGTGGCAAATCCATAAAAACTTCTTCCTTAAGGTTGCCATTAAGAAAAGCATTTTTCACATCAAACTGGTAGAGAGGCCAATTTGAATTAACTGCAAGAGACAAAAGAACTCTAATAAAGTTAATTTTTGCAACAGGAGCAAATGTTTCCTGATAATCTATCCCGTAGGGTTGAGTGAAGTTTTTAGCTACCAATCTAGCCTTGTATCTCTCGATGCTACCATCTGCATTACATTTTATGGTAAACACCCATTTACATCCCACTGGTTTCTTATCCTTTGGCAACTCTACTATCTCCCAAGTACTGATTTGGTTTAGAGCATTAATCTCCTCCATGACAGCTAGTTTCCAATTTGGATCTTCTAAAGTTTCATGTATATTCCTTGGAACAAACAAATTAGTTATCCTAGATTTGAAGGCCTTATGACTATTTGATAGTTTTTCATATGAAATGTAGTCGAAATAGGATATTTGGTACAACTTCGAACGCCTTTTCTAATGGCTATGGGAACATCAAGGGCGGAGACAACAAGAGAATTATTTTGAAAATTTGAAGAAGAGGGATTACCAGACAAAGTTGTAGAGGGAGGATTATCAGACAGTTCAGTTTCATTTATCGGAGTCTCATATTGGCTTTGTGTAGGAGTAACTTTCCTCTAATTGAATTTCCTTCTAGTATAAAACTTTAACTCAGAACTAGGATTCGCAGAATCGTTTTTTAGTATTTCTCCCCTTGATTGGACAGTTTCTATACTTGGCATCAAAGGACTAGTAAAATCCGAACCGATAGGACTAGGAAGAGGAACAGAAATATTCCAAAAATTATCTTCCAAATTCATTTTCTCCCCCTGAAGAGAATTTTGGGTAAAATATGGTTGATTTTCTAAAACACAACTTTCACAACGAACAATCAATTCCCTTAAATAACTTTGGAAATAGATATTTTAAATAAAACAAACTGAGATGTCCTAGTCTACGATGCCAAAGCATAATTTGTTCCCTAACAGAAAGAGAACTAATACTACTAAGACCCTGAGTTATTTTATCACTAAAGGTACCTTCATCAAAGTGGTAGAGACCATCAAGCATCCTACCGCGGCCAATTATCCTCTTCGAGTTCTGATTCCGAAAAATACAATGGGATTCAAAGAAAGTAACACGATAGTTAGAATCTTTAGAAAATTGGTTGACAGATAAAAGCTAATTGTGGAACATGGAGGACAGACTGTAACGAAATGGTCTCAGTCAATTTAATGGTTCCTTTTCCTGCAACAGAAGAAAAACTACCATATGCCATTCTAACTTTTTCATTGGAGTATGAAGGAAGGTATGATCCAAAGAGATTAGAAGAACTTGTCATATGATCAGAAGCTTCAGAATCTATAATCCATGAGATGAGTTACTACACGAGAAAGCCTTAGAATAAATACCTGTTTGTGTCAAGGATACACCTGAGTTATTAGAAGGTAAATTGGAGGATAGCAATTTTAGGATTTGATGAATTTGCTCTATACTTGAGTTACCACGACTATCACCAAACATTTCTCTACCATTGTCAATTGAGAATTGGACCATTTTAAATAAACAACTTTTCCTGATCAAAAGCTGACAACAGAACCACACCAGAAAATAATTAACCAAACCAAATCAGGCCACAAATTGATATTAGAAAGAAGATAACCATAACCAAGAGAGTTAAACCAAGGCAGAATAAGTTAAGCTGGATGAACCAACTCGAACCAGTTTGAACCAAAGTACTTTCCTGGACTGATTTGTGAGCTAGACTGGCCTAGGGTTTGAAAAACCCAAAAAACTTGAATCCGAATGGGGTGGCAACGAAGTATAGCGGAGAGATCGGCGGCGACTGTAGACGGCAGCGAGACCAGCGATTGGGTTGCTGCGAACGGGTCTGAGATTTGTTACGAACGAATCTGAGTAGGTGAACGGTGGATATGCGACGATGAAGATGGTCAAAAAAAAAAATGCAGAGATGAGCGGAGACGGCCGACAATGATGGACGGCAATGACGGTCGTCGGTTGACTGTGCGATTGACGATCGGCGGAGATATGCAATTGACGGATGGCGATTGGATCTGCGATGACGGGTGAAGGAGATATGCGATTGATGGCCACAGAGATGCGATTGATGGACGGCTGGGCTAACTTGCGAACGACGGCAGATCTGCGATGATGGACGGCAAATCTGCGCGTTTGGATGGCGATAGCGGAGTTGCCGTGAAGAGATTGCTGACGGCGAGGAGAGACATCGTGAGTTGTTTGTGACGGCTAGCGTTTTTGATAACGGCTAGGGTTTTTGATGATGGCTAGGGTTTTTAGAATTAGGGCTTTATTTCCTAAATCTCTGATACCATGTGAATTTGAGAAAGTAAAAAATATTCTGATATATTCAAACATGTAACTTAGGTCTTCTTATATAGGAGAATGACCTACTACAGACAAGGAAAGCAATAGATAGCATAAAGACTAAATATCAACAATAAAGACTAAATATTAACAACTAATATTGACGACATACAAATATTGATAAATCCAACACTATTATGTGGATAGGACACTCAGATTATAGTTTTGTAAAAGTTACTTTTTGATGATTGCCTAAGTCTAAGGTAGGGATGCTATCCTAGTGGTAATTGGTAAATTGATGAGTGATGACGTATGGTCACTTTCTAGCACTTGAGCACCATTTTAATGCTCCATCCACTGATACCCTATGATAATGAGATCATTGAGTTGATCTACATGGCATACCAAAATTGTTTTTTTTTTTCAATACATATAGGGATGAGATGTTCATGAGCATATTCTTGCAAGAATTGTTTAAGCTCTGAGAAGCCACTCTCAAGCATAGCATTGCCTACCATTCACTAGCTAATGGCAAACCTGAGTGCTTAGTTATCTTCGCTGTTTTGCATTAGACAACTTCGTTCTTGTATATTGCAAAGCACCCCCTCTTTTAGTTTCCTCTGTTTTAGCATTTTCACATCTATCGATCGATTGTTACAAGAGAGATATGCCATCTTAATAATCCTAGGGTCCAACTTTCCTGGGATCGAAGTCTTTTGTTGACAAGCATAGGTGGGGATTTGGCTTTTTGTAGGCTCTAGTCGTATTAGGCACTAAACTCTTTTGGCTAAGCATTTTAAAAAGATAGGTCACATCGGAAGCATATAGTTGGGTGTGAGAGTAGATTCCTACCTTGAGTGAAAAGGTAAATCTTTGGGAGGGTGGCATTGATGAAAATTATAAGCCTTCAATTTGCTTCACATGTCCTCGAAGAAGGTTGCCCTACAAGCTTAACAAAAAACGAGCGAGTTAAGGTGTCATCATAAGGAAAAGTCCTGTGAGGGCCCTACAAGCATAACAATAAATGAGTGAGTTAAGGTGTCATCATAAGGGACAGGGCTTATGAGTCTTTTTGTGTAAATTTTGTTAGCAGTATATAATGATGAGGAATATGGGAAGGGTGTAATAACATCTCATCAGGTTTGATCAACAACTTTGAAAAGCTAAAGTCTCTAAGAAAGTGAAAGAATTTCTTTGGATTGACATCCAAGAGAACCTGTATGCATGTGATAATATTCAAAAGAAGTGGCCTAGCATGATGATTTATCCAGATTGGTGTGTGATGTGTAAAGCAGCTTCAGAAAGTCATACTCATTTGTTTTCGCATTGTGAGTTTGCCAATGTTGTGTGGTCCAAAATGTTCAAGATTTTCGGCTTAAGTTGGTGCTTCCCTAAAGGTTGTAAGGATGCTTTGTTGCAGCTTGTTGTTGGTTCTCCTTTCAAAAGAAAAGTCTTGGTTCTCTGGCGCAATATGGTTTCAGATACCTTATGGAGACTTTGGTTTGAAAGAACTCAGAGAGTTTTCGAAGACATTGAAGCAATATTTGAGGGCTCTTTAAAGAGTTTTGTAATTACAGCTTTGTGAATATTACTGCCAATTAAAATTCTTTTTTGAAACCATTGGCTTCTAGGGGATTGTTCTTTCTTCTTTTTTGTAATAGCTGCTTTTGACAATGAAATCCTTCTCAGTTTCTTATTAAAAAAAAATAATAAATAAGGAATACGGGTAGGGTAGTAAGAATTAAAATTGTGACATGGGGTGGGGGTTAGGCAGGTAGAAAGTTAATAAGGAGCTAGGGAATTCTAAATTTCCTTTGGAAAGAACCAAGCGTTCTTGAAAATCTAGGAGTTTTGTAACTTTCCCCATGTAATTCAATATGGAAGTCCTTTTCCCTCCTTTCGCTATCATAATAATAATTTCCCTTAACACTAAAGCTTGAGTTTATTTTATGGTTCATTTAAACTGGGCACGTATCCATAGCCAGAGTTTTTCCAAAGCTTAGCTAGATAATGAAACCTCATTTTAGCCCATGTAATTATTCCTAAATAATTGATGTTCCGTAACTTCTTATTTTGTAGAAAATATAGTATGTCTGGGTTTGAGTTGATTTTGGTAAATATCACCAACTTGCAACTCACATTTCTTATCTTATGAGTATAATAGATACTCACAGAGCCAATTATCTCAATTTACCGATTCTGAGATTTTGAATTCTTCTCCTTGCCAATTATCTCAATTATCTATTTGCTTGGCCAAAATGCATCTCATTACACGTTTAATTGTCGATCAATTCAAAATTGATTATGTTTTATGAATGTCCAAGGTTGGTTAAGTCTTATCTATTACTTTGGGTTACTGAGCCCACAACTTATTTTTCTCCCGTATCTGTAAAGTTTGAATTATTATACTCACTGCTGTATGTAACACTAGCACCATGACTAGAATGGATCAGGATGTGGAACATTTGCAAATCAACATTTTCTCCTCTCTCTAATTGTGGAACTATTGCAAGTGATTTAATCATTGGACTCTTTTCTCTCCCTAATGGAGTTTTATTTAAAATCACTCCGCTGTTGTCATTATGAACAGGTGGTTGATGCCTATGCATTAATAGGGGATGTCTCTGGCCTTGCTGAAAAGATACAAAGCTTTTTTATGCAGGAAGTTATATCAGAAACCCATTCTGCCTTGAGAGACATCGTGCAAGAGGTGTGCTTGTGTAATTCATATTAAGGAGCTGTTTTATGTGGAGAGAACAAGATTGCTTTCTACCTGGCAGACTGGCACCATCTAAAGTTGATTATGATTGAAATATAAGTTCAATATTCCCATTCACGCACTAAGATATACGGGAAAGATATTTATTTGATAGATGACATTTAGTTTGAAACACAACTGGTGGACTTGAGGCTTCTTTTCTCACATGTCATATATACCTTTTTAAGTCATTGACATACGGAGAACTAAATGAATGCAAGGACTCTGTTAACATACAGTGATCGGGCCTTATAGATATTAAATATAGATTGGAATGAAAAGATCATTTTGAGCTTTCCTTTATGTTTCTCAATTTAGATTCTACATCATTTACTTGATTAATATCTTAAGAAATATTCAAATGATGGTTTTTCTATCTTTGCAGGATCAAGATGTACATATACAAAATAGTAGGTAAAGTTCTTGAAGTTACTGAGTCTCATATTCAGTATGTCAAATGAGAACTTTTAACTTATTTTAACCAATTTTCAGGCTTACATACAGTGATCTATGCACTTGGATACCTGAATCAAAGTTTAGGCAGTGTTCGTTAAAAACACTAGCTGTCCTATTTACCTTGATGTGTTCATATTATCAAATCTTGAGCTTCCAACTGGATACCAAGGTCTGCTTCCATTTTTACTTTTGCTTATTCATTCCACTTGAATCATATTTATTTTCTGCTTATAAAATAGTCTCTTTGTTTTCTAGCTCTGGTTAATGAGTCTCATGTTAAAGTATCATTCTATTACAATGGATGATTGTGCTACTTGTCATCTGTGTCGCATTGAAAATAATTCTTTTAAAAAATTTCTGTTGCATTCAATATGTTTCTATCGCATTTAATATATATTTTTATAAATAAGTTTTCATAGAGAAAAAATTTGGAGGTCACAGAATTCTCATTGCAGAAGTTGGTAGATACAAGACTCAAGTCTATTTTTAAGAAACCTCATTGTGGTACTCTTAAAACTATGACGTTGCTTAGAAAATCAACTTTAGATGAGTATGTGTTGTCTTGTGGGTAGAGAAATCTACAAAGAAACTTGGAGAGTATTACATATACTATCAATTTTCTTTTTGAAGTAAAGGAGAAGAAAGTTATAGGCCTGATAACTAAGGTAAGAAGAAATGTATTGTTGTTTCAGAAGGCTATGACAAAACTAGGTGAACTAGCTTTCCAAGCTTATCAATAATTTTTTCAAGCATTGGTGGATTGCCTTGTAAATTAAGCTCACCTTTGCTTATACCATCCTCCCTTTGAAGGAGATTTTATTGGCCTTTTTCTAGAGGACTTTTCTATGAAGAAAATTTTGGCAAGCGCGTGGTTCAACTTCTAATAAAGTTGTTGGATCCCCTGAAGGAACCTTAAATGATTTTTTTGAAGGAGATGATGTTAGGCCAGTTGAGGTAGAACATCTTATTTTTTGAACAAGATACTAACTTTTCATTGGAGATGTGAAAAGGAACAAAATGTTCAAAGATACAAACTCTCAAAAGAGTGAAAAGAAATGCAGAAAACTAAAAAATAATTACAAAGGGCTAATAAACAATTATTAAAAATAAGAACAGGGAATAATTCGAAAAGGAATCCATAAGAGAACACCTTCCTCTTTCTTTGCTTCCTTGAATGGTTTCTCTTGTTCAATTGCTGGTGGTGTGTCTGGTTTGGCATACATACCTTGTCGCGCAGGAGCCTTTTGATCTTAGTGGCCTTTTCTCTCCCACTTGGTTACTTGAGATTTTCTTATGTAGGGTCTCATATATTGAGATTTTCATGGTTCTTTAAGTCAAACGTTTTGGGTAAATGTAGGGAGAGTGGATTAACCTGTATCTCAAATGTCTCTAAAGAGCCTGTATATTTGTGTCTCTTATCCAAAAAGAAAATATAAAATCTTTTGTACTTCTCCTTGGTTCTCAAATCTTAGCTTTTTGTAACTATTATTGTTATTATTATTATTTTAATAATGTGAACCAATTTGAGATTCTCTATACAATTCTTTTGTCCCCTTTGTTGTAATAGGATAGCTATTGAATCCAACGAATAATAATTCCAGCTTGTGAATCATTAATATTCAATTTCTCTTTTTTGATGGACACGTCCAATCAATTCTATCTGTAAAAATTATTTTTCTGTTAAAGTTCTCTTGTCTTGGTCTTCTTTTTTATCCATAGGAGTGACAAGTATGGTTGAATCTACAAGGATTGGTTTAATTTATTTATTAGAAACTAAAAAAATATAAAAAACAATTTTTAATTTATCTATATCTTCAACTCAATTGTGGAATATTGAAAATCATGTTCAAATTCAAACAATTAAATACAATTTATCAGTAAAATGTAAAGATATATATATTCAAATTATAAATTATAAGTGTATTTGAATGTTATCAACTACAAGACACTTAAATTCATGTTGGAGTTGGAATCTATGTTAAGTAAAAATGTGCTTTCCAACTTTTAGTTCATTGATTAGCAGCTGTTAGATTGGTATGCATGGTTCATGGTGGCGACGTTGCACATTAACTGATCAGTTTGCCACTTATTTTGACTTGGGTGTGGTAGGAGCTACTCATCAGGTTGGTATTTACATAGATGAGTATTTCTAGCTACTGTCCTATGTGATTTTCTTATAGTAAGTAGTAATAACTCCAGGATGTGGAATCGTCATGATTGCTATTGTTTATTTATTTATTTGTACTTTTCATATTTATTTTGTTTGAATCTTCTAGTAGTTAGAACCAGATTTTATTGTTAGCTCTCCTTCGTCAGGAGGCTTTTCTGTTGGGCAGTTAAATTTGTATCTCATGAGTCATATATCTTTGATCCAGGATTCTGACCAAACTCCTAATATGAAGCAACAAGATGATAGTTATGTCCTGAATTTAGGAGATACAGAGGAATTGACGACCAATGTCTCTTCAATGGGGACTACAGGGATTATGAATTCTGTGTATATGGATGATGATGATCCCGATAGAGAGTCCCGGATGGATAGCAGTACAGCATCAACTAGTGGTTCTCCCTGGTATCATCTGAGAAAAGATGCTATAAGTTTTGTTTCCCAAACCCTTCAAAGAGGCCGTAAGAACCTTTGGCAACTAACTACTAGTCGTGTGTCAGTACTGCTTTCTTCTGCTGCTGTCTGTTCAACCAGCATTCACCAATTCTTGAAAAACTATGAAGATCTCAATGTCTTTATTTTGGCTGGAGAAGCCTTCTGTGGAGTTGAAGCAGTTGAGTTTAGGCAAAAGTTGAAGAGTGTTTGTGAAAACTATTATGTGGCTTTTCATAAGCAGAGTATGCATGTAAGTTAACCCTCTTGCATAATATTGCCCTAGTTATGGTTTACAATCGTTTATATGTTTGGGGTCATGGTTATCATGGAAGCTAAATGCTGCACTATGTTTAACTGTCAGTAATTTTTCTGTGCCAGCCTACTTCAACAAAGCAATGAAACTTTCAATTATCTCATCATAAGTGATTAATATAGAAAGAAACTACCATTTTTCTTGCATAACTTATTATTTCCCTTCTTGCTGTTTCTTTTGATTTTGTAGTTATTCTGTTAGAGTTTTGACTTCATCTTCTCCGACACAGTTTTCTCTTTGGTTCAGAAACCAGAGTTCTTTGACTATTTGAAAAAGCTTCAATTCAGATGTTATTTATGTAAAGTTTCTTATGTCTTAACCAGCATATTATTAATTGTGAGCATTAATTAAAACCTTTAATTTGTTTAATTAGGTAGATTGTCTACGACATTTCATTACAATGTCAAACTTTAACAATTTCTAAGTTTGAATGTGAAAATTCACAAGCACTTATTGCGTTGGTTTTGCTCTATTCATGTTTTTAGGCGCTAAAGATGGTTATGGAAAAAGAGAATTGGCTTACACTGCCACCAGATACAGTTCAAGTTGTTAGTTTTGCTGGACTGATTGGTGATGGGGCACCTTTGTTTGTTTCATCTGATGGTAGCTCATCAAACGCCAAGGTCTCTCGTAAAGACAAATCATCAAGCTTAGTTAATACAGGCATGGATAGAAGTGGTTTTTTGCAATGGCTCAAAGGTGGAAATCCATTTTTACTTAAACTCATGCATACTTATAAAGAAGGTACACCAAATGGGGCTTCTTATGGAGAATTAGATGGAAGTGTTGGTGAAAGTTTTCGTAGGAATAGTGTCTCTCCAACTAAGGGTACAGACAATCTTGCAAATGGTGCGAATACTGTTTCTGAAGATGAAGACGAAGATCTTCTTGCTGACTTTATTGATGAAGATAGTCAACTCCCAAGCAGACTTTCAAAACCCAAACTTCCACGAAACCACTCTTCTAATCATATTAATGATGAATTTACAGCTCAAACAGGATCATCTCTATGCCTTCTAAGGTGAAGTTATCTGTAGTGATATAGGAAGTGTGAGAAACTATCATATATTTTTTTTTGTAATGTTGATTTTTTTGAACTAAATTCCAGGTCCATGGACAAATATGCAAGGCTTATGCAGAAACTAGAGATAGTGAATGTTGAGTTTTTTAAGGTATCCTGTATTTGATGGTTGACTTGCTATATATCATTCTCCTTTAAACTGCCTGAAATATTTCTCTGATTAGTTTCTTTTGAGCAGGGGATATGCCAGTTGTTTGGAGTGTTCTTCTATTTTGTATACGAGACTTTTGGTCAGCTTAACACTACTTCTGGTGGAAAAGGCTTCCCTGACTCCCTCAATTGTACTCACCCTTCTTTCTTCCTTTTTCCATTTTGTTCCCTGACCAGTCCTTGAAACTCTTATGTTTTCTTATTCTCAAAGGTCAATATTCAAGAACATAACAACATTATTTTACTTTCTTGAATTTTGGCTTACATGATTTATGTCTTACTGAGATAATCAGATAAGTTGAAGACAGCCTTGTCCCGTGCTGCTCAGGATTGTGATCAGTGGATCAGACCCCATTCATCTTCCCCATCAGCTTCAAATACGACATTTTCTTTCAGCGAAGTTACCCCAAGTCCTCCTGGCACTAGTTTTGGTTACTTGCATGGAACATCTTTTGGTCTCAAGGTGCTAGTTTATTTA

mRNA sequence

ATGCTTCCGGTATTGAGTGAGCTTCGTCATGCTGTGGACATGCAATCAATGCTCGAATCTCTTGTTGAAGAGGGAAATTATTACAAGGTCCTGTCTGAGTATTTGCAGCTATTGGATAGCATTTCAGAGCTTTCAGTAATTCAAGACATGAGCCGTGGCGTAGAAGTTTGGCTGGGAAGAGCCCTGCAAAAGTTGGATTCACTATTGATAGAAGTCTGCCAGGAGTTCAAGAAGGAGGGTTATTTAACCGTGGTTGATGCCTATGCATTAATAGGGGATGTCTCTGGCCTTGCTGAAAAGATACAAAGCTTTTTTATGCAGGAAGTTATATCAGAAACCCATTCTGCCTTGAGAGACATCGTGCAAGAGGTGTGCTTCTCTCCTTCGTCAGGAGGCTTTTCTGTTGGGCAGTTAAATTTGTATCTCATGAGTCATATATCTTTGATCCAGGATTCTGACCAAACTCCTAATATGAAGCAACAAGATGATAGTTATGTCCTGAATTTAGGAGATACAGAGGAATTGACGACCAATGTCTCTTCAATGGGGACTACAGGGATTATGAATTCTGTGTATATGGATGATGATGATCCCGATAGAGAGTCCCGGATGGATAGCAGTACAGCATCAACTAGTGGTTCTCCCTGGTATCATCTGAGAAAAGATGCTATAAGTTTTGTTTCCCAAACCCTTCAAAGAGGCCGTAAGAACCTTTGGCAACTAACTACTAGTCGTGTGTCAGTACTGCTTTCTTCTGCTGCTGTCTGTTCAACCAGCATTCACCAATTCTTGAAAAACTATGAAGATCTCAATGTCTTTATTTTGGCTGGAGAAGCCTTCTGTGGAGTTGAAGCAGTTGAGTTTAGGCAAAAGTTGAAGAGTGTTTGTGAAAACTATTATGTGGCTTTTCATAAGCAGAGTATGCATGCGCTAAAGATGGTTATGGAAAAAGAGAATTGGCTTACACTGCCACCAGATACAGTTCAAGTTGTTAGTTTTGCTGGACTGATTGGTGATGGGGCACCTTTGTTTGTTTCATCTGATGGTAGCTCATCAAACGCCAAGGTCTCTCGTAAAGACAAATCATCAAGCTTAGTTAATACAGGCATGGATAGAAGTGGTTTTTTGCAATGGCTCAAAGGTGGAAATCCATTTTTACTTAAACTCATGCATACTTATAAAGAAGGTACACCAAATGGGGCTTCTTATGGAGAATTAGATGGAAGTGTTGGTGAAAGTTTTCGTAGGAATAGTGTCTCTCCAACTAAGGGTACAGACAATCTTGCAAATGGTGCGAATACTGTTTCTGAAGATGAAGACGAAGATCTTCTTGCTGACTTTATTGATGAAGATAGTCAACTCCCAAGCAGACTTTCAAAACCCAAACTTCCACGAAACCACTCTTCTAATCATATTAATGATGAATTTACAGCTCAAACAGGATCATCTCTATGCCTTCTAAGGTCCATGGACAAATATGCAAGGCTTATGCAGAAACTAGAGATAGTGAATGTTGAGTTTTTTAAGGGGATATGCCAGTTGTTTGGAGTGTTCTTCTATTTTGTATACGAGACTTTTGGTCAGCTTAACACTACTTCTGGTGGAAAAGGCTTCCCTGACTCCCTCAATTATAAGTTGAAGACAGCCTTGTCCCGTGCTGCTCAGGATTGTGATCAGTGGATCAGACCCCATTCATCTTCCCCATCAGCTTCAAATACGACATTTTCTTTCAGCGAAGTTACCCCAAGTCCTCCTGGCACTAGTTTTGGTTACTTGCATGGAACATCTTTTGGTCTCAAGGTGCTAGTTTATTTA

Coding sequence (CDS)

ATGCTTCCGGTATTGAGTGAGCTTCGTCATGCTGTGGACATGCAATCAATGCTCGAATCTCTTGTTGAAGAGGGAAATTATTACAAGGTCCTGTCTGAGTATTTGCAGCTATTGGATAGCATTTCAGAGCTTTCAGTAATTCAAGACATGAGCCGTGGCGTAGAAGTTTGGCTGGGAAGAGCCCTGCAAAAGTTGGATTCACTATTGATAGAAGTCTGCCAGGAGTTCAAGAAGGAGGGTTATTTAACCGTGGTTGATGCCTATGCATTAATAGGGGATGTCTCTGGCCTTGCTGAAAAGATACAAAGCTTTTTTATGCAGGAAGTTATATCAGAAACCCATTCTGCCTTGAGAGACATCGTGCAAGAGGTGTGCTTCTCTCCTTCGTCAGGAGGCTTTTCTGTTGGGCAGTTAAATTTGTATCTCATGAGTCATATATCTTTGATCCAGGATTCTGACCAAACTCCTAATATGAAGCAACAAGATGATAGTTATGTCCTGAATTTAGGAGATACAGAGGAATTGACGACCAATGTCTCTTCAATGGGGACTACAGGGATTATGAATTCTGTGTATATGGATGATGATGATCCCGATAGAGAGTCCCGGATGGATAGCAGTACAGCATCAACTAGTGGTTCTCCCTGGTATCATCTGAGAAAAGATGCTATAAGTTTTGTTTCCCAAACCCTTCAAAGAGGCCGTAAGAACCTTTGGCAACTAACTACTAGTCGTGTGTCAGTACTGCTTTCTTCTGCTGCTGTCTGTTCAACCAGCATTCACCAATTCTTGAAAAACTATGAAGATCTCAATGTCTTTATTTTGGCTGGAGAAGCCTTCTGTGGAGTTGAAGCAGTTGAGTTTAGGCAAAAGTTGAAGAGTGTTTGTGAAAACTATTATGTGGCTTTTCATAAGCAGAGTATGCATGCGCTAAAGATGGTTATGGAAAAAGAGAATTGGCTTACACTGCCACCAGATACAGTTCAAGTTGTTAGTTTTGCTGGACTGATTGGTGATGGGGCACCTTTGTTTGTTTCATCTGATGGTAGCTCATCAAACGCCAAGGTCTCTCGTAAAGACAAATCATCAAGCTTAGTTAATACAGGCATGGATAGAAGTGGTTTTTTGCAATGGCTCAAAGGTGGAAATCCATTTTTACTTAAACTCATGCATACTTATAAAGAAGGTACACCAAATGGGGCTTCTTATGGAGAATTAGATGGAAGTGTTGGTGAAAGTTTTCGTAGGAATAGTGTCTCTCCAACTAAGGGTACAGACAATCTTGCAAATGGTGCGAATACTGTTTCTGAAGATGAAGACGAAGATCTTCTTGCTGACTTTATTGATGAAGATAGTCAACTCCCAAGCAGACTTTCAAAACCCAAACTTCCACGAAACCACTCTTCTAATCATATTAATGATGAATTTACAGCTCAAACAGGATCATCTCTATGCCTTCTAAGGTCCATGGACAAATATGCAAGGCTTATGCAGAAACTAGAGATAGTGAATGTTGAGTTTTTTAAGGGGATATGCCAGTTGTTTGGAGTGTTCTTCTATTTTGTATACGAGACTTTTGGTCAGCTTAACACTACTTCTGGTGGAAAAGGCTTCCCTGACTCCCTCAATTATAAGTTGAAGACAGCCTTGTCCCGTGCTGCTCAGGATTGTGATCAGTGGATCAGACCCCATTCATCTTCCCCATCAGCTTCAAATACGACATTTTCTTTCAGCGAAGTTACCCCAAGTCCTCCTGGCACTAGTTTTGGTTACTTGCATGGAACATCTTTTGGTCTCAAGGTGCTAGTTTATTTA

Protein sequence

MLPVLSELRHAVDMQSMLESLVEEGNYYKVLSEYLQLLDSISELSVIQDMSRGVEVWLGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSALRDIVQEVCFSPSSGGFSVGQLNLYLMSHISLIQDSDQTPNMKQQDDSYVLNLGDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTASTSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYEDLNVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGMDRSGFLQWLKGGNPFLLKLMHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDEDSQLPSRLSKPKLPRNHSSNHINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPSASNTTFSFSEVTPSPPGTSFGYLHGTSFGLKVLVYL

Homology

[Close]

BLAST of MS006776 vs. NCBI nr
Match: XP_022152900.1 (syndetin isoform X1 [Momordica charantia])

HSP 1 Score: 1092.4 bits (2824), Expect = 0.0e+00
Identity = 574/630 (91.11%), Postives = 582/630 (92.38%), Query Frame = 0


Query: 1   MLPVLSELRHAVDMQSMLESLVEEGNYYK---VLSEYLQLLDSISELSVIQDMSRGVEVW 60
           MLPVLSELRH VDMQSMLESLVEEGNYYK   VLSEYLQLLDSISELSVIQDMSRGVEVW
Sbjct: 236 MLPVLSELRHVVDMQSMLESLVEEGNYYKAFQVLSEYLQLLDSISELSVIQDMSRGVEVW 295

Query: 61  LGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSAL 120
           LGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSAL
Sbjct: 296 LGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSAL 355

Query: 121 RDIVQE---------------VCFSPSSGGF------SVGQLNLYLMSHISLI------Q 180
           RDIVQE               +C       F      ++  L   + S+  ++      +
Sbjct: 356 RDIVQEDQDVHIQNSRLTYSDLCTWIPESKFRQCSLKTLAVLFTLMCSYYQILSFQLDTK 415

Query: 181 DSDQTPNMKQQDDSYVLNLGDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTAS 240
           DSDQTPNMKQQDDSYVLNLGDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTAS
Sbjct: 416 DSDQTPNMKQQDDSYVLNLGDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTAS 475

Query: 241 TSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYEDL 300
           TSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYEDL
Sbjct: 476 TSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYEDL 535

Query: 301 NVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQV 360
           NVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQV
Sbjct: 536 NVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQV 595

Query: 361 VSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGMDRSGFLQWLKGGNPFLLKLM 420
           VSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGMDRSGFLQWLKGGNPFLLKLM
Sbjct: 596 VSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGMDRSGFLQWLKGGNPFLLKLM 655

Query: 421 HTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDE 480
           HTYKEGTPNGASYGELDGSVGESF RNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDE
Sbjct: 656 HTYKEGTPNGASYGELDGSVGESFCRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDE 715

Query: 481 DSQLPSRLSKPKLPRNHSSNHINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKG 540
           DSQLPSRLSKPKLPRNHSSNHINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKG
Sbjct: 716 DSQLPSRLSKPKLPRNHSSNHINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKG 775

Query: 541 ICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPSA 600
           ICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPSA
Sbjct: 776 ICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPSA 835

[Close]

BLAST of MS006776 vs. NCBI nr
Match: XP_022152901.1 (syndetin isoform X2 [Momordica charantia])

HSP 1 Score: 1092.4 bits (2824), Expect = 0.0e+00
Identity = 574/630 (91.11%), Postives = 582/630 (92.38%), Query Frame = 0


Query: 1   MLPVLSELRHAVDMQSMLESLVEEGNYYK---VLSEYLQLLDSISELSVIQDMSRGVEVW 60
           MLPVLSELRH VDMQSMLESLVEEGNYYK   VLSEYLQLLDSISELSVIQDMSRGVEVW
Sbjct: 236 MLPVLSELRHVVDMQSMLESLVEEGNYYKAFQVLSEYLQLLDSISELSVIQDMSRGVEVW 295

Query: 61  LGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSAL 120
           LGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSAL
Sbjct: 296 LGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSAL 355

Query: 121 RDIVQE---------------VCFSPSSGGF------SVGQLNLYLMSHISLI------Q 180
           RDIVQE               +C       F      ++  L   + S+  ++      +
Sbjct: 356 RDIVQEDQDVHIQNSRLTYSDLCTWIPESKFRQCSLKTLAVLFTLMCSYYQILSFQLDTK 415

Query: 181 DSDQTPNMKQQDDSYVLNLGDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTAS 240
           DSDQTPNMKQQDDSYVLNLGDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTAS
Sbjct: 416 DSDQTPNMKQQDDSYVLNLGDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTAS 475

Query: 241 TSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYEDL 300
           TSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYEDL
Sbjct: 476 TSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYEDL 535

Query: 301 NVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQV 360
           NVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQV
Sbjct: 536 NVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQV 595

Query: 361 VSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGMDRSGFLQWLKGGNPFLLKLM 420
           VSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGMDRSGFLQWLKGGNPFLLKLM
Sbjct: 596 VSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGMDRSGFLQWLKGGNPFLLKLM 655

Query: 421 HTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDE 480
           HTYKEGTPNGASYGELDGSVGESF RNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDE
Sbjct: 656 HTYKEGTPNGASYGELDGSVGESFCRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDE 715

Query: 481 DSQLPSRLSKPKLPRNHSSNHINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKG 540
           DSQLPSRLSKPKLPRNHSSNHINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKG
Sbjct: 716 DSQLPSRLSKPKLPRNHSSNHINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKG 775

Query: 541 ICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPSA 600
           ICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPSA
Sbjct: 776 ICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPSA 835

[Close]

BLAST of MS006776 vs. NCBI nr
Match: XP_038895533.1 (syndetin isoform X1 [Benincasa hispida])

HSP 1 Score: 975.3 bits (2520), Expect = 2.4e-280
Identity = 513/631 (81.30%), Postives = 553/631 (87.64%), Query Frame = 0


Query: 1   MLPVLSELRHAVDMQSMLESLVEEGNYYK---VLSEYLQLLDSISELSVIQDMSRGVEVW 60
           MLPVLSELRHAVDMQSMLE+LVEEGNYYK   VLSEYLQLLDS SELSVIQ+MSRGVE+W
Sbjct: 236 MLPVLSELRHAVDMQSMLETLVEEGNYYKAFQVLSEYLQLLDSFSELSVIQEMSRGVEIW 295

Query: 61  LGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSAL 120
           LGR LQKLDSLLIEVCQEFKKE YLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSAL
Sbjct: 296 LGRTLQKLDSLLIEVCQEFKKEAYLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSAL 355

Query: 121 RDIVQE---------------VCFSPSSGGF------SVGQLNLYLMSHISLI------Q 180
           +DIVQE               +CF      F      ++  L   + S+  ++      +
Sbjct: 356 KDIVQEDQDVHIQNSRLTYSDLCFRIPESKFRLCLLKTLAVLFTLMCSYYQILSFQLDTK 415

Query: 181 DS-DQTPNMKQQDDSYVLNLGDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTA 240
           DS +QT +MKQ +D++ +NLGDTEELT NVSSMG+TGI NSVYMD  D +RESR DSSTA
Sbjct: 416 DSIEQTRSMKQPEDNHDINLGDTEELTINVSSMGSTGITNSVYMDGGDSNRESRTDSSTA 475

Query: 241 STSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYED 300
           STSGSPWYHLRKDAI FVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYED
Sbjct: 476 STSGSPWYHLRKDAIHFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYED 535

Query: 301 LNVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQ 360
           LNVFILAGEAFCGVEAVEFRQKLK+VCENYYVAFHKQSMHALKMVMEKENWLTLP DTVQ
Sbjct: 536 LNVFILAGEAFCGVEAVEFRQKLKTVCENYYVAFHKQSMHALKMVMEKENWLTLPSDTVQ 595

Query: 361 VVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGMDRSGFLQWLKGGNPFLLKL 420
           VVSFAGL+GDGAPLFV+S+G+SSN KV R DKS+S ++TGMDRSGFLQWLK GNPFLLKL
Sbjct: 596 VVSFAGLLGDGAPLFVTSEGNSSNGKVPRSDKSTSSISTGMDRSGFLQWLKSGNPFLLKL 655

Query: 421 MHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFID 480
           MHT KEGTPNG  YGE+DGSVGES  R++ SPTK  DNLANGANTVSEDEDEDLLADFID
Sbjct: 656 MHTCKEGTPNGIHYGEVDGSVGESPHRSNASPTKYPDNLANGANTVSEDEDEDLLADFID 715

Query: 481 EDSQLPSRLSKPKLPRNHSSNHINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFK 540
           EDSQLPSR+SKPKL RNHSSNH ND+ TAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFK
Sbjct: 716 EDSQLPSRISKPKLSRNHSSNHSNDDITAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFK 775

Query: 541 GICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPS 600
           G+CQLF VFFYFVYETFGQ +T+SGGKGFPDSLNYKLKTALSRAAQDC+QWIRPHSSSPS
Sbjct: 776 GMCQLFEVFFYFVYETFGQPSTSSGGKGFPDSLNYKLKTALSRAAQDCEQWIRPHSSSPS 835

[Close]

BLAST of MS006776 vs. NCBI nr
Match: XP_038895534.1 (syndetin isoform X2 [Benincasa hispida])

HSP 1 Score: 975.3 bits (2520), Expect = 2.4e-280
Identity = 513/631 (81.30%), Postives = 553/631 (87.64%), Query Frame = 0


Query: 1   MLPVLSELRHAVDMQSMLESLVEEGNYYK---VLSEYLQLLDSISELSVIQDMSRGVEVW 60
           MLPVLSELRHAVDMQSMLE+LVEEGNYYK   VLSEYLQLLDS SELSVIQ+MSRGVE+W
Sbjct: 51  MLPVLSELRHAVDMQSMLETLVEEGNYYKAFQVLSEYLQLLDSFSELSVIQEMSRGVEIW 110

Query: 61  LGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSAL 120
           LGR LQKLDSLLIEVCQEFKKE YLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSAL
Sbjct: 111 LGRTLQKLDSLLIEVCQEFKKEAYLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSAL 170

Query: 121 RDIVQE---------------VCFSPSSGGF------SVGQLNLYLMSHISLI------Q 180
           +DIVQE               +CF      F      ++  L   + S+  ++      +
Sbjct: 171 KDIVQEDQDVHIQNSRLTYSDLCFRIPESKFRLCLLKTLAVLFTLMCSYYQILSFQLDTK 230

Query: 181 DS-DQTPNMKQQDDSYVLNLGDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTA 240
           DS +QT +MKQ +D++ +NLGDTEELT NVSSMG+TGI NSVYMD  D +RESR DSSTA
Sbjct: 231 DSIEQTRSMKQPEDNHDINLGDTEELTINVSSMGSTGITNSVYMDGGDSNRESRTDSSTA 290

Query: 241 STSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYED 300
           STSGSPWYHLRKDAI FVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYED
Sbjct: 291 STSGSPWYHLRKDAIHFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYED 350

Query: 301 LNVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQ 360
           LNVFILAGEAFCGVEAVEFRQKLK+VCENYYVAFHKQSMHALKMVMEKENWLTLP DTVQ
Sbjct: 351 LNVFILAGEAFCGVEAVEFRQKLKTVCENYYVAFHKQSMHALKMVMEKENWLTLPSDTVQ 410

Query: 361 VVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGMDRSGFLQWLKGGNPFLLKL 420
           VVSFAGL+GDGAPLFV+S+G+SSN KV R DKS+S ++TGMDRSGFLQWLK GNPFLLKL
Sbjct: 411 VVSFAGLLGDGAPLFVTSEGNSSNGKVPRSDKSTSSISTGMDRSGFLQWLKSGNPFLLKL 470

Query: 421 MHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFID 480
           MHT KEGTPNG  YGE+DGSVGES  R++ SPTK  DNLANGANTVSEDEDEDLLADFID
Sbjct: 471 MHTCKEGTPNGIHYGEVDGSVGESPHRSNASPTKYPDNLANGANTVSEDEDEDLLADFID 530

Query: 481 EDSQLPSRLSKPKLPRNHSSNHINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFK 540
           EDSQLPSR+SKPKL RNHSSNH ND+ TAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFK
Sbjct: 531 EDSQLPSRISKPKLSRNHSSNHSNDDITAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFK 590

Query: 541 GICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPS 600
           G+CQLF VFFYFVYETFGQ +T+SGGKGFPDSLNYKLKTALSRAAQDC+QWIRPHSSSPS
Sbjct: 591 GMCQLFEVFFYFVYETFGQPSTSSGGKGFPDSLNYKLKTALSRAAQDCEQWIRPHSSSPS 650

[Close]

BLAST of MS006776 vs. NCBI nr
Match: XP_011654229.1 (syndetin isoform X3 [Cucumis sativus])

HSP 1 Score: 965.3 bits (2494), Expect = 2.5e-277
Identity = 504/631 (79.87%), Postives = 546/631 (86.53%), Query Frame = 0


Query: 1   MLPVLSELRHAVDMQSMLESLVEEGNYYK---VLSEYLQLLDSISELSVIQDMSRGVEVW 60
           MLPVLSELRHAVDMQSMLE LVEEGNYYK   VLSEYLQLLDS SELSVIQ+MSRGVE+W
Sbjct: 123 MLPVLSELRHAVDMQSMLEVLVEEGNYYKAFQVLSEYLQLLDSFSELSVIQEMSRGVEIW 182

Query: 61  LGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSAL 120
           LGR LQKLDSLLIEVCQEFK+E YLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSAL
Sbjct: 183 LGRTLQKLDSLLIEVCQEFKEEAYLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSAL 242

Query: 121 RDIVQ---------------EVCFSPSSGGF------SVGQLNLYLMSHISLI------Q 180
           +D+VQ               ++CF      F      ++  L   + S+  ++      +
Sbjct: 243 KDVVQQDQDVHIQNSRLTYSDLCFRIPESKFRLCLLKTLAVLFTLMCSYYQILSFQLDTK 302

Query: 181 DS-DQTPNMKQQDDSYVLNLGDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTA 240
           DS +QTP+MK Q+D Y + LGD+EE T NVSSMG  GI NS+YMD+ D +RESR DSS A
Sbjct: 303 DSIEQTPSMKHQEDKYDVKLGDSEESTINVSSMGAAGITNSIYMDEGDFNRESRTDSSAA 362

Query: 241 STSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYED 300
           STSGSPWYHLRKD I FVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYED
Sbjct: 363 STSGSPWYHLRKDGIHFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYED 422

Query: 301 LNVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQ 360
           LNVF LAGEAFCGVEAVEFRQKLK VCENYYV FHKQSMHALKMVMEKENWLTLPPDTVQ
Sbjct: 423 LNVFTLAGEAFCGVEAVEFRQKLKIVCENYYVGFHKQSMHALKMVMEKENWLTLPPDTVQ 482

Query: 361 VVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGMDRSGFLQWLKGGNPFLLKL 420
           VVSFAGL+GDGAPLFV+S+G+SSN KV R DKS+S ++TGMDRSGFLQWLK GNPFLLKL
Sbjct: 483 VVSFAGLVGDGAPLFVTSEGNSSNGKVPRSDKSTSSISTGMDRSGFLQWLKSGNPFLLKL 542

Query: 421 MHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFID 480
           MHTYKEGTPNG  YGE+DGSVG S  R++VSPTK TDNL+NGANTVSEDEDEDLLADFID
Sbjct: 543 MHTYKEGTPNGTHYGEVDGSVGGSSHRSNVSPTKFTDNLSNGANTVSEDEDEDLLADFID 602

Query: 481 EDSQLPSRLSKPKLPRNHSSNHINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFK 540
           EDSQLPSR+SKPKL RNH SNH +D  TAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFK
Sbjct: 603 EDSQLPSRISKPKLSRNHCSNHSSDHITAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFK 662

Query: 541 GICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPS 600
           G+CQLF VFFYFVYETFGQL+TTSGGKGFPDSLNYKLKTALSRAAQDC+QWIRPHSSSPS
Sbjct: 663 GMCQLFEVFFYFVYETFGQLSTTSGGKGFPDSLNYKLKTALSRAAQDCEQWIRPHSSSPS 722

[Close]

BLAST of MS006776 vs. ExPASy TrEMBL
Match: A0A6J1DJ46 (syndetin isoform X2 OS=Momordica charantia OX=3673 GN=LOC111020518 PE=4 SV=1)

HSP 1 Score: 1092.4 bits (2824), Expect = 0.0e+00
Identity = 574/630 (91.11%), Postives = 582/630 (92.38%), Query Frame = 0


Query: 1   MLPVLSELRHAVDMQSMLESLVEEGNYYK---VLSEYLQLLDSISELSVIQDMSRGVEVW 60
           MLPVLSELRH VDMQSMLESLVEEGNYYK   VLSEYLQLLDSISELSVIQDMSRGVEVW
Sbjct: 236 MLPVLSELRHVVDMQSMLESLVEEGNYYKAFQVLSEYLQLLDSISELSVIQDMSRGVEVW 295

Query: 61  LGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSAL 120
           LGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSAL
Sbjct: 296 LGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSAL 355

Query: 121 RDIVQE---------------VCFSPSSGGF------SVGQLNLYLMSHISLI------Q 180
           RDIVQE               +C       F      ++  L   + S+  ++      +
Sbjct: 356 RDIVQEDQDVHIQNSRLTYSDLCTWIPESKFRQCSLKTLAVLFTLMCSYYQILSFQLDTK 415

Query: 181 DSDQTPNMKQQDDSYVLNLGDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTAS 240
           DSDQTPNMKQQDDSYVLNLGDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTAS
Sbjct: 416 DSDQTPNMKQQDDSYVLNLGDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTAS 475

Query: 241 TSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYEDL 300
           TSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYEDL
Sbjct: 476 TSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYEDL 535

Query: 301 NVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQV 360
           NVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQV
Sbjct: 536 NVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQV 595

Query: 361 VSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGMDRSGFLQWLKGGNPFLLKLM 420
           VSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGMDRSGFLQWLKGGNPFLLKLM
Sbjct: 596 VSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGMDRSGFLQWLKGGNPFLLKLM 655

Query: 421 HTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDE 480
           HTYKEGTPNGASYGELDGSVGESF RNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDE
Sbjct: 656 HTYKEGTPNGASYGELDGSVGESFCRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDE 715

Query: 481 DSQLPSRLSKPKLPRNHSSNHINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKG 540
           DSQLPSRLSKPKLPRNHSSNHINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKG
Sbjct: 716 DSQLPSRLSKPKLPRNHSSNHINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKG 775

Query: 541 ICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPSA 600
           ICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPSA
Sbjct: 776 ICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPSA 835

[Close]

BLAST of MS006776 vs. ExPASy TrEMBL
Match: A0A6J1DF95 (syndetin isoform X1 OS=Momordica charantia OX=3673 GN=LOC111020518 PE=4 SV=1)

HSP 1 Score: 1092.4 bits (2824), Expect = 0.0e+00
Identity = 574/630 (91.11%), Postives = 582/630 (92.38%), Query Frame = 0


Query: 1   MLPVLSELRHAVDMQSMLESLVEEGNYYK---VLSEYLQLLDSISELSVIQDMSRGVEVW 60
           MLPVLSELRH VDMQSMLESLVEEGNYYK   VLSEYLQLLDSISELSVIQDMSRGVEVW
Sbjct: 236 MLPVLSELRHVVDMQSMLESLVEEGNYYKAFQVLSEYLQLLDSISELSVIQDMSRGVEVW 295

Query: 61  LGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSAL 120
           LGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSAL
Sbjct: 296 LGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSAL 355

Query: 121 RDIVQE---------------VCFSPSSGGF------SVGQLNLYLMSHISLI------Q 180
           RDIVQE               +C       F      ++  L   + S+  ++      +
Sbjct: 356 RDIVQEDQDVHIQNSRLTYSDLCTWIPESKFRQCSLKTLAVLFTLMCSYYQILSFQLDTK 415

Query: 181 DSDQTPNMKQQDDSYVLNLGDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTAS 240
           DSDQTPNMKQQDDSYVLNLGDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTAS
Sbjct: 416 DSDQTPNMKQQDDSYVLNLGDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTAS 475

Query: 241 TSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYEDL 300
           TSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYEDL
Sbjct: 476 TSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYEDL 535

Query: 301 NVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQV 360
           NVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQV
Sbjct: 536 NVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQV 595

Query: 361 VSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGMDRSGFLQWLKGGNPFLLKLM 420
           VSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGMDRSGFLQWLKGGNPFLLKLM
Sbjct: 596 VSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGMDRSGFLQWLKGGNPFLLKLM 655

Query: 421 HTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDE 480
           HTYKEGTPNGASYGELDGSVGESF RNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDE
Sbjct: 656 HTYKEGTPNGASYGELDGSVGESFCRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDE 715

Query: 481 DSQLPSRLSKPKLPRNHSSNHINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKG 540
           DSQLPSRLSKPKLPRNHSSNHINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKG
Sbjct: 716 DSQLPSRLSKPKLPRNHSSNHINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKG 775

Query: 541 ICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPSA 600
           ICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPSA
Sbjct: 776 ICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPSA 835

[Close]

BLAST of MS006776 vs. ExPASy TrEMBL
Match: A0A1S3CG39 (syndetin OS=Cucumis melo OX=3656 GN=LOC103500532 PE=4 SV=1)

HSP 1 Score: 963.8 bits (2490), Expect = 3.5e-277
Identity = 504/631 (79.87%), Postives = 546/631 (86.53%), Query Frame = 0


Query: 1   MLPVLSELRHAVDMQSMLESLVEEGNYYK---VLSEYLQLLDSISELSVIQDMSRGVEVW 60
           +LPVLSELRHAVDMQSMLE LVEEGNYYK   VLSEYLQLLDS SELSVIQ+MSRGVE+W
Sbjct: 236 LLPVLSELRHAVDMQSMLEILVEEGNYYKAFQVLSEYLQLLDSFSELSVIQEMSRGVEIW 295

Query: 61  LGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSAL 120
           LGR LQKLDSLLIEVCQEFKKE YLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSAL
Sbjct: 296 LGRTLQKLDSLLIEVCQEFKKEAYLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSAL 355

Query: 121 RDIVQE---------------VCFSPSSGGFSVGQLNLYLMSHISL------------IQ 180
           +DIVQE               +CF      F +  L    +   S+             +
Sbjct: 356 KDIVQEDQDVHVQNSRLTYSDLCFRIPESKFRLCLLKTLAVLFTSMCSYYQILSFQLDTK 415

Query: 181 DS-DQTPNMKQQDDSYVLNLGDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTA 240
           DS ++TP+MK Q+D+Y + LGD+EE T +VSSMG+TGI +S+YMD+ D  RESR DSS A
Sbjct: 416 DSIERTPSMKHQEDNYDIKLGDSEESTIDVSSMGSTGITHSIYMDEGDSIRESRTDSSAA 475

Query: 241 STSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYED 300
           STSGSPWYHLRKDAI FVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYED
Sbjct: 476 STSGSPWYHLRKDAIDFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYED 535

Query: 301 LNVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQ 360
           LNVFILAGEAFCGVEAVEFRQKLK VCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQ
Sbjct: 536 LNVFILAGEAFCGVEAVEFRQKLKIVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQ 595

Query: 361 VVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGMDRSGFLQWLKGGNPFLLKL 420
           VVSFAGL+GDGAPLFV+S+G+SSN KV R DKS+S ++TGMDRSGFLQWL  GNPFLLKL
Sbjct: 596 VVSFAGLVGDGAPLFVTSEGNSSNGKVPRSDKSTSSISTGMDRSGFLQWLNSGNPFLLKL 655

Query: 421 MHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFID 480
           +HTYKEGTPNG  YGE+DGSVG S  R++ SPTK TDNLANGANTVSEDEDEDLLADFID
Sbjct: 656 IHTYKEGTPNGTHYGEVDGSVGGSSHRSNASPTKFTDNLANGANTVSEDEDEDLLADFID 715

Query: 481 EDSQLPSRLSKPKLPRNHSSNHINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFK 540
           EDSQLPSR+SKPKL RNH SNH  D+ TAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFK
Sbjct: 716 EDSQLPSRISKPKLSRNHCSNHNYDDITAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFK 775

Query: 541 GICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPS 600
           G+CQLF VFFYFVYETFGQL+T+SGGKGFPDSLNYKLKTALSRAAQDC+QWIRPHSSSPS
Sbjct: 776 GMCQLFEVFFYFVYETFGQLSTSSGGKGFPDSLNYKLKTALSRAAQDCEQWIRPHSSSPS 835

[Close]

BLAST of MS006776 vs. ExPASy TrEMBL
Match: A0A5A7VC68 (Syndetin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold538G00950 PE=4 SV=1)

HSP 1 Score: 941.0 bits (2431), Expect = 2.4e-270
Identity = 494/620 (79.68%), Postives = 535/620 (86.29%), Query Frame = 0


Query: 1   MLPVLSELRHAVDMQSMLESLVEEGNYYK---VLSEYLQLLDSISELSVIQDMSRGVEVW 60
           +LPVLSELRHAVDMQSMLE LVEEGNYYK   VLSEYLQLLDS SELSVIQ+MSRGVE+W
Sbjct: 269 LLPVLSELRHAVDMQSMLEILVEEGNYYKAFQVLSEYLQLLDSFSELSVIQEMSRGVEIW 328

Query: 61  LGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSAL 120
           LGR LQKLDSLLIEVCQEFKKE YLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSAL
Sbjct: 329 LGRTLQKLDSLLIEVCQEFKKEAYLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSAL 388

Query: 121 RDIVQEV----------------CFSPSSGGFSVGQLNLYLMSHISL------------I 180
           +DIVQEV                CF      F +  L    +   S+             
Sbjct: 389 KDIVQEVRLCKLRNWFMLTYSDLCFRIPESKFRLCLLKTLAVLFTSMCSYYQILSFQLDT 448

Query: 181 QDS-DQTPNMKQQDDSYVLNLGDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSST 240
           +DS ++TP+MK Q+D+Y + LGD+EE T +VSSMG+TGI +S+YMD+ D  RESR DSS 
Sbjct: 449 KDSIERTPSMKHQEDNYDIKLGDSEESTIDVSSMGSTGITHSIYMDEGDSIRESRTDSSA 508

Query: 241 ASTSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYE 300
           ASTSGSPWYHLRKDAI FVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYE
Sbjct: 509 ASTSGSPWYHLRKDAIDFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYE 568

Query: 301 DLNVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTV 360
           DLNVFILAGEAFCGVEAVEFRQKLK VCENYYVAFHKQSMHALKMVMEKENWLTLPPDTV
Sbjct: 569 DLNVFILAGEAFCGVEAVEFRQKLKIVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTV 628

Query: 361 QVVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGMDRSGFLQWLKGGNPFLLK 420
           QVVSFAGL+GDGAPLFV+S+G+SSN KV R DKS+S ++TGMDRSGFLQWL  GNPFLLK
Sbjct: 629 QVVSFAGLVGDGAPLFVTSEGNSSNGKVPRSDKSTSSISTGMDRSGFLQWLNSGNPFLLK 688

Query: 421 LMHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFI 480
           L+HTYKEGTPNG  YGE+DGSVG S  R++ SPTK TDNLANGANTVSEDEDEDLLADFI
Sbjct: 689 LIHTYKEGTPNGTHYGEVDGSVGGSSHRSNASPTKFTDNLANGANTVSEDEDEDLLADFI 748

Query: 481 DEDSQLPSRLSKPKLPRNHSSNHINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFF 540
           DEDSQLPSR+SKPKL RNH SNH  D+ TAQTGSSLCLLRSMDKYARLMQKLEIVNVEFF
Sbjct: 749 DEDSQLPSRISKPKLSRNHCSNHNYDDITAQTGSSLCLLRSMDKYARLMQKLEIVNVEFF 808

Query: 541 KGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSP 589
           KG+CQLF VFFYFVYETFGQL+T+SGGKGFPDSLNYKLKTALSRAAQDC+QWIRPHSSSP
Sbjct: 809 KGMCQLFEVFFYFVYETFGQLSTSSGGKGFPDSLNYKLKTALSRAAQDCEQWIRPHSSSP 868

[Close]

BLAST of MS006776 vs. ExPASy TrEMBL
Match: A0A5D3CVZ5 (Syndetin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold259G00300 PE=4 SV=1)

HSP 1 Score: 940.3 bits (2429), Expect = 4.1e-270
Identity = 493/619 (79.64%), Postives = 535/619 (86.43%), Query Frame = 0


Query: 1   MLPVLSELRHAVDMQSMLESLVEEGNYYK---VLSEYLQLLDSISELSVIQDMSRGVEVW 60
           +LPVLSELRHAVDMQSMLE LVEEGNYYK   VLSEYLQLLDS SELSVIQ+MSRGVE+W
Sbjct: 266 LLPVLSELRHAVDMQSMLEILVEEGNYYKAFQVLSEYLQLLDSFSELSVIQEMSRGVEIW 325

Query: 61  LGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSAL 120
           LGR LQKLDSLLIEVCQEFKKE YLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSAL
Sbjct: 326 LGRTLQKLDSLLIEVCQEFKKEAYLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSAL 385

Query: 121 RDIVQE---------------VCFSPSSGGFSVGQLNLYLMSHISL------------IQ 180
           +DIVQE               +CF      F +  L    +   S+             +
Sbjct: 386 KDIVQEDQDVHVQNSRLTYSDLCFRIPESKFRLCLLKTLAVLFTSMCSYYQILSFQLDTK 445

Query: 181 DS-DQTPNMKQQDDSYVLNLGDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTA 240
           DS ++TP+MK Q+D+Y + LGD+EE T +VSSMG+TGI +S+YMD+ D  RESR DSS A
Sbjct: 446 DSIERTPSMKHQEDNYDIKLGDSEESTIDVSSMGSTGITHSIYMDEGDSIRESRTDSSAA 505

Query: 241 STSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYED 300
           STSGSPWYHLRKDAI FVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYED
Sbjct: 506 STSGSPWYHLRKDAIDFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYED 565

Query: 301 LNVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQ 360
           LNVFILAGEAFCGVEAVEFRQKLK VCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQ
Sbjct: 566 LNVFILAGEAFCGVEAVEFRQKLKIVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQ 625

Query: 361 VVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGMDRSGFLQWLKGGNPFLLKL 420
           VVSFAGL+GDGAPLFV+S+G+SSN KV R DKS+S ++TGMDRSGFLQWL  GNPFLLKL
Sbjct: 626 VVSFAGLVGDGAPLFVTSEGNSSNGKVPRSDKSTSSISTGMDRSGFLQWLNSGNPFLLKL 685

Query: 421 MHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFID 480
           +HTYKEGTPNG  YGE+DGSVG S  R++ SPTK TDNLANGANTVSEDEDEDLLADFID
Sbjct: 686 IHTYKEGTPNGTHYGEVDGSVGGSSHRSNASPTKFTDNLANGANTVSEDEDEDLLADFID 745

Query: 481 EDSQLPSRLSKPKLPRNHSSNHINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFK 540
           EDSQLPSR+SKPKL RNH SNH  D+ TAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFK
Sbjct: 746 EDSQLPSRISKPKLSRNHCSNHNYDDITAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFK 805

Query: 541 GICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPS 589
           G+CQLF VFFYFVYETFGQL+T+SGGKGFPDSLNYKLKTALSRAAQDC+QWIRPHSSSPS
Sbjct: 806 GMCQLFEVFFYFVYETFGQLSTSSGGKGFPDSLNYKLKTALSRAAQDCEQWIRPHSSSPS 865

[Close]

BLAST of MS006776 vs. TAIR 10
Match: AT2G27900.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515); Has 316 Blast hits to 252 proteins in 92 species: Archae - 0; Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). )

HSP 1 Score: 624.4 bits (1609), Expect = 9.6e-179
Identity = 358/649 (55.16%), Postives = 440/649 (67.80%), Query Frame = 0


Query: 1   MLPVLSELRHAVDMQSMLESLVEEGNY---YKVLSEYLQLLDSISELSVIQDMSRGVEVW 60
           MLP+L++LRHA  MQS LE LVE+GNY   ++VLSEYLQLLDS+SE S  Q+M+RGVEVW
Sbjct: 247 MLPILTDLRHARVMQSNLEDLVEDGNYCKAFQVLSEYLQLLDSLSEFSAAQEMTRGVEVW 306

Query: 61  LGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSAL 120
           LGR L KLDSLL+ VCQEFK++ Y+ V+DAYALIGDVSGLAEKIQSFFMQEVISETHS L
Sbjct: 307 LGRTLHKLDSLLLGVCQEFKEDSYVMVLDAYALIGDVSGLAEKIQSFFMQEVISETHSVL 366

Query: 121 RDIVQE---------------VCFSPSSGGF------SVGQLNLYLMSHISLIQDSDQ-- 180
           + IV E               +C       F      ++  L   + S+  ++  + +  
Sbjct: 367 KSIVGEDNSAATQYSRLTYSDLCLQTPESKFRQCLLRTLAVLFQLIYSYHEIMSFTPEKE 426

Query: 181 -----TPNM--KQQDDSYV----------LNLGDTEELTTNVSSMGTTGIMNSVYMDDDD 240
                +P++   Q  DS            L  G     T +      +G  +SV +  + 
Sbjct: 427 AEILVSPSLATTQMVDSVTGSSCDPQDGGLLPGSIPPCTISAEESDGSGTSSSVQLASNI 486

Query: 241 PDRESRMDSSTASTSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCS 300
              ESR      S+S SPWY+LRK++ +FVS+TLQRGR+NLWQLTTSRVSVLLSS    S
Sbjct: 487 AIDESRNSEDRVSSSESPWYYLRKESAAFVSETLQRGRRNLWQLTTSRVSVLLSSPGASS 546

Query: 301 TSIHQFLKNYEDLNVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEK 360
           TSIHQFLKNYEDL++FILAGEAFCG E V+FR+KLK VCENY+ AFH+QSMHALKMV+EK
Sbjct: 547 TSIHQFLKNYEDLSIFILAGEAFCGFEVVDFREKLKGVCENYFTAFHRQSMHALKMVLEK 606

Query: 361 ENWLTLPPDTVQVVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGMDRSGFLQ 420
           E W  L PDTVQ ++FAGL+GDGAPL +SS  +S +++    DK S+ ++   +RSGF  
Sbjct: 607 ETWTKLSPDTVQAINFAGLVGDGAPLIISSRSASGSSRFPHSDKPSNSIDPSGNRSGFSY 666

Query: 421 WLKGGNPFLLKLMHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSE 480
           WLK GNPF  KL H Y+E     +  GE D    +S   + V+P        NG + VSE
Sbjct: 667 WLKSGNPFSAKLTH-YREDQDYSSINGE-DHEGNDSIHDDVVNPKIRDIKRINGGSPVSE 726

Query: 481 DEDEDLLADFIDEDSQLPSRLSKPKLPRNHSSN-HINDEFTAQTGSSLCLLRSMDKYARL 540
           DE+EDLLADFIDEDSQLP R       R  SS+   ND+ TAQTGSSLCLLRSMDKYARL
Sbjct: 727 DENEDLLADFIDEDSQLPRRSFTRSQSRTSSSHFSTNDDLTAQTGSSLCLLRSMDKYARL 786

Query: 541 MQKLEIVNVEFFKGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQD 600
           MQKLEIVN EFFKGICQLFGVFFYFV++ FGQ NT SGGKG  DS N++LK+ LSR +Q+
Sbjct: 787 MQKLEIVNAEFFKGICQLFGVFFYFVFQVFGQENTNSGGKGVSDSFNHRLKSCLSRISQE 846

[Close]

BLAST of MS006776 vs. TAIR 10
Match: AT2G27900.2 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 624.4 bits (1609), Expect = 9.6e-179
Identity = 358/649 (55.16%), Postives = 440/649 (67.80%), Query Frame = 0


Query: 1   MLPVLSELRHAVDMQSMLESLVEEGNY---YKVLSEYLQLLDSISELSVIQDMSRGVEVW 60
           MLP+L++LRHA  MQS LE LVE+GNY   ++VLSEYLQLLDS+SE S  Q+M+RGVEVW
Sbjct: 247 MLPILTDLRHARVMQSNLEDLVEDGNYCKAFQVLSEYLQLLDSLSEFSAAQEMTRGVEVW 306

Query: 61  LGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSAL 120
           LGR L KLDSLL+ VCQEFK++ Y+ V+DAYALIGDVSGLAEKIQSFFMQEVISETHS L
Sbjct: 307 LGRTLHKLDSLLLGVCQEFKEDSYVMVLDAYALIGDVSGLAEKIQSFFMQEVISETHSVL 366

Query: 121 RDIVQE---------------VCFSPSSGGF------SVGQLNLYLMSHISLIQDSDQ-- 180
           + IV E               +C       F      ++  L   + S+  ++  + +  
Sbjct: 367 KSIVGEDNSAATQYSRLTYSDLCLQTPESKFRQCLLRTLAVLFQLIYSYHEIMSFTPEKE 426

Query: 181 -----TPNM--KQQDDSYV----------LNLGDTEELTTNVSSMGTTGIMNSVYMDDDD 240
                +P++   Q  DS            L  G     T +      +G  +SV +  + 
Sbjct: 427 AEILVSPSLATTQMVDSVTGSSCDPQDGGLLPGSIPPCTISAEESDGSGTSSSVQLASNI 486

Query: 241 PDRESRMDSSTASTSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCS 300
              ESR      S+S SPWY+LRK++ +FVS+TLQRGR+NLWQLTTSRVSVLLSS    S
Sbjct: 487 AIDESRNSEDRVSSSESPWYYLRKESAAFVSETLQRGRRNLWQLTTSRVSVLLSSPGASS 546

Query: 301 TSIHQFLKNYEDLNVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEK 360
           TSIHQFLKNYEDL++FILAGEAFCG E V+FR+KLK VCENY+ AFH+QSMHALKMV+EK
Sbjct: 547 TSIHQFLKNYEDLSIFILAGEAFCGFEVVDFREKLKGVCENYFTAFHRQSMHALKMVLEK 606

Query: 361 ENWLTLPPDTVQVVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGMDRSGFLQ 420
           E W  L PDTVQ ++FAGL+GDGAPL +SS  +S +++    DK S+ ++   +RSGF  
Sbjct: 607 ETWTKLSPDTVQAINFAGLVGDGAPLIISSRSASGSSRFPHSDKPSNSIDPSGNRSGFSY 666

Query: 421 WLKGGNPFLLKLMHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSE 480
           WLK GNPF  KL H Y+E     +  GE D    +S   + V+P        NG + VSE
Sbjct: 667 WLKSGNPFSAKLTH-YREDQDYSSINGE-DHEGNDSIHDDVVNPKIRDIKRINGGSPVSE 726

Query: 481 DEDEDLLADFIDEDSQLPSRLSKPKLPRNHSSN-HINDEFTAQTGSSLCLLRSMDKYARL 540
           DE+EDLLADFIDEDSQLP R       R  SS+   ND+ TAQTGSSLCLLRSMDKYARL
Sbjct: 727 DENEDLLADFIDEDSQLPRRSFTRSQSRTSSSHFSTNDDLTAQTGSSLCLLRSMDKYARL 786

Query: 541 MQKLEIVNVEFFKGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQD 600
           MQKLEIVN EFFKGICQLFGVFFYFV++ FGQ NT SGGKG  DS N++LK+ LSR +Q+
Sbjct: 787 MQKLEIVNAEFFKGICQLFGVFFYFVFQVFGQENTNSGGKGVSDSFNHRLKSCLSRISQE 846

The following BLAST results are available for this feature:

BLAST of MS006776 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152900.1	0.0e+00	91.11	syndetin isoform X1 [Momordica charantia]	[more]
XP_022152901.1	0.0e+00	91.11	syndetin isoform X2 [Momordica charantia]	[more]
XP_038895533.1	2.4e-280	81.30	syndetin isoform X1 [Benincasa hispida]	[more]
XP_038895534.1	2.4e-280	81.30	syndetin isoform X2 [Benincasa hispida]	[more]
XP_011654229.1	2.5e-277	79.87	syndetin isoform X3 [Cucumis sativus]	[more]

BLAST of MS006776 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS006776 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DJ46	0.0e+00	91.11	syndetin isoform X2 OS=Momordica charantia OX=3673 GN=LOC111020518 PE=4 SV=1	[more]
A0A6J1DF95	0.0e+00	91.11	syndetin isoform X1 OS=Momordica charantia OX=3673 GN=LOC111020518 PE=4 SV=1	[more]
A0A1S3CG39	3.5e-277	79.87	syndetin OS=Cucumis melo OX=3656 GN=LOC103500532 PE=4 SV=1	[more]
A0A5A7VC68	2.4e-270	79.68	Syndetin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold538G00950 PE=4 ...	[more]
A0A5D3CVZ5	4.1e-270	79.64	Syndetin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold259G00300 PE=4 ...	[more]

BLAST of MS006776 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27900.1	9.6e-179	55.16	CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2451, C-terminal (Int...	[more]
AT2G27900.2	9.6e-179	55.16	CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2451, C-terminal (Int...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019515	Vacuolar protein sorting-associated protein 54, N-terminal	PFAM	PF10475	Vps54_N	coord: 1..123 e-value: 7.3E-30 score: 104.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 455..474
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 413..434
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 404..435
None	No IPR available	PANTHER	PTHR13258:SF4	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN-RELATED	coord: 193..600 coord: 1..123
IPR040047	Syndetin	PANTHER	PTHR13258	UNCHARACTERIZED	coord: 193..600 coord: 1..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS006776.1	MS006776.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032456	endocytic recycling
biological_process	GO:0042147	retrograde transport, endosome to Golgi
cellular_component	GO:1990745	EARP complex