MS006558 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GGTAGCGGTAGCGGTAGCGAACGTCAAGTTTATAACTCTACGAGCGATTGTAGCAACTTCGAGAATTCAATGGTTGCTCTAGGAAGTAGAGGAAGTACTCATATCAATCGAGATGAATTTGAGAAAGATCCTCCACGTTATTTTCGCAATCTTCATGCAACTGAAAAGAATGAGAATAAGAAG GGTAGCGGTAGCGGTAGCGAACGTCAAGTTTATAACTCTACGAGCGATTGTAGCAACTTCGAGAATTCAATGGTTGCTCTAGGAAGTAGAGGAAGTACTCATATCAATCGAGATGAATTTGAGAAAGATCCTCCACGTTATTTTCGCAATCTTCATGCAACTGAAAAGAATGAGAATAAGAAG GGTAGCGGTAGCGGTAGCGAACGTCAAGTTTATAACTCTACGAGCGATTGTAGCAACTTCGAGAATTCAATGGTTGCTCTAGGAAGTAGAGGAAGTACTCATATCAATCGAGATGAATTTGAGAAAGATCCTCCACGTTATTTTCGCAATCTTCATGCAACTGAAAAGAATGAGAATAAGAAG GSGSGSERQVYNSTSDCSNFENSMVALGSRGSTHINRDEFEKDPPRYFRNLHATEKNENKK Homology
BLAST of MS006558 vs. NCBI nr
Match: XP_022951913.1 (jacalin-related lectin 5-like [Cucurbita moschata] >XP_023521144.1 jacalin-related lectin 5-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 57.0 bits (136), Expect = 6.6e-05 Identity = 30/57 (52.63%), Postives = 37/57 (64.91%), Query Frame = 0
BLAST of MS006558 vs. NCBI nr
Match: KGN43709.1 (hypothetical protein Csa_017051 [Cucumis sativus]) HSP 1 Score: 56.2 bits (134), Expect = 1.1e-04 Identity = 37/64 (57.81%), Postives = 40/64 (62.50%), Query Frame = 0
BLAST of MS006558 vs. NCBI nr
Match: XP_022973282.1 (jacalin-related lectin 5-like [Cucurbita maxima]) HSP 1 Score: 54.3 bits (129), Expect = 4.3e-04 Identity = 29/57 (50.88%), Postives = 35/57 (61.40%), Query Frame = 0
BLAST of MS006558 vs. ExPASy TrEMBL
Match: A0A6J1GJ19 (jacalin-related lectin 5-like OS=Cucurbita moschata OX=3662 GN=LOC111454653 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 3.2e-05 Identity = 30/57 (52.63%), Postives = 37/57 (64.91%), Query Frame = 0
BLAST of MS006558 vs. ExPASy TrEMBL
Match: A0A0A0K3Z8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G062750 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 5.5e-05 Identity = 37/64 (57.81%), Postives = 40/64 (62.50%), Query Frame = 0
BLAST of MS006558 vs. ExPASy TrEMBL
Match: A0A6J1I742 (jacalin-related lectin 5-like OS=Cucurbita maxima OX=3661 GN=LOC111471849 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.1e-04 Identity = 29/57 (50.88%), Postives = 35/57 (61.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|