MS006488 (gene) Bitter gourd (TR) v1

Overview
NameMS006488
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationscaffold404: 240917 .. 242254 (+)
RNA-Seq ExpressionMS006488
SyntenyMS006488
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCAGTGCTCATGTTCAATCTCAATTACCAGAACAATCCCTTAACCATTTCAAACTAATGGTCCTTAAAGGCCTTTGTCCGAGTTCAAACTCTTTCAATAATGTATTGGGTTTACTTACTAAGTCAGGGGATTTAAACAAAGCTTGGTGTTTTTTCAATGAATTTCTGGGGAGGACTCACTTTGATGTATATAGTTTTGGGATAATGATTAAAGCCTTTTGTGAAGGTGGCAATGTAAGTAAAGGTTTTGAGCTTTTGGCTCAAATGGAGAGGATGGGTTTGTCTCCCAATGTTGTTATATACACTATTTTGATTGATGCCTGCTGCAAAAATGGTGACATTGAGCAGGCTAAAGTATTGTTTTCGAAGATGGGTGACCTTGGTTTGGTTGCTAACCAATATACTTACACTGTGATGATCAATGGGTTGTTCAAGAAAGGATGTAAGAAGGATGGATTTGAGCTTTATGAGAAGATGAATCTTATTGGGGTGTTTCCTAGTGTATATACTTATAACAGTCTTATTAACGAGTATTGCAGGGATGGGACATTGTGTCTCGCATTTAAGTTGTTCGATGAAATGCGTACAAGAGGAGTATCGTGTAATGTAGTCACTTACAATATTCTGATTGGTGGATTATGTCGTAACAGACAAGTTCTGAAAGCAGAACGGTTGTTAGAGCAAATGAAACTAGCTCATATAAATCCATCTACTATAACATTTAACTTGTTGATGGATGGGTTCTGTAACGTTGGAAAGTTTGATAAGGCCTTAAGTTATTTTGATGAGTTGAAGTTGATTGGTCTGTCTCCAACTTCAGTGACCTACAACATTTTGATTGCAGGTTTCTCAAAAGCAGGAAATTCTGCTGTAGTTTGTGAGTTAGTGAGAGAGATGGAGGACAGAGGCATTTCTCCCTCCAAAGTAACATACACGATTCTGATGGACGCCTTTGTTCGATCAGACGATGTGGGGAAAGCCTCTCAGATGTTTCATCTCATGAAGAAAGTCGGTTCAGTCCCGGATCAGTATACATATGGTGTTCTAATGCATGGTTTGTGTATGAAAGGTAACATGGTAGAGGCATCAAAGCTGTATAAATCAATGATTGAGACGCATCTACAACCTAATGATGTTATCTATAATACAATGATAAATGGGTACTGCAAGGAGTGCAACTCTTACAAGGCCTTGAAGTTTCTTCAAGAAATGGTCAGGAAAGGAATGACTCCAAGTCAGGCTAGTTATAGTTCTACCATTGAAGTCCTCTGCAAGGACGGGAAGTCGACCGAGGCGAAGGAGTTACTTAAAGAGATGATCGAGAACGGTTTGGACCCA

mRNA sequence

ATCAGTGCTCATGTTCAATCTCAATTACCAGAACAATCCCTTAACCATTTCAAACTAATGGTCCTTAAAGGCCTTTGTCCGAGTTCAAACTCTTTCAATAATGTATTGGGTTTACTTACTAAGTCAGGGGATTTAAACAAAGCTTGGTGTTTTTTCAATGAATTTCTGGGGAGGACTCACTTTGATGTATATAGTTTTGGGATAATGATTAAAGCCTTTTGTGAAGGTGGCAATGTAAGTAAAGGTTTTGAGCTTTTGGCTCAAATGGAGAGGATGGGTTTGTCTCCCAATGTTGTTATATACACTATTTTGATTGATGCCTGCTGCAAAAATGGTGACATTGAGCAGGCTAAAGTATTGTTTTCGAAGATGGGTGACCTTGGTTTGGTTGCTAACCAATATACTTACACTGTGATGATCAATGGGTTGTTCAAGAAAGGATGTAAGAAGGATGGATTTGAGCTTTATGAGAAGATGAATCTTATTGGGGTGTTTCCTAGTGTATATACTTATAACAGTCTTATTAACGAGTATTGCAGGGATGGGACATTGTGTCTCGCATTTAAGTTGTTCGATGAAATGCGTACAAGAGGAGTATCGTGTAATGTAGTCACTTACAATATTCTGATTGGTGGATTATGTCGTAACAGACAAGTTCTGAAAGCAGAACGGTTGTTAGAGCAAATGAAACTAGCTCATATAAATCCATCTACTATAACATTTAACTTGTTGATGGATGGGTTCTGTAACGTTGGAAAGTTTGATAAGGCCTTAAGTTATTTTGATGAGTTGAAGTTGATTGGTCTGTCTCCAACTTCAGTGACCTACAACATTTTGATTGCAGGTTTCTCAAAAGCAGGAAATTCTGCTGTAGTTTGTGAGTTAGTGAGAGAGATGGAGGACAGAGGCATTTCTCCCTCCAAAGTAACATACACGATTCTGATGGACGCCTTTGTTCGATCAGACGATGTGGGGAAAGCCTCTCAGATGTTTCATCTCATGAAGAAAGTCGGTTCAGTCCCGGATCAGTATACATATGGTGTTCTAATGCATGGTTTGTGTATGAAAGGTAACATGGTAGAGGCATCAAAGCTGTATAAATCAATGATTGAGACGCATCTACAACCTAATGATGTTATCTATAATACAATGATAAATGGGTACTGCAAGGAGTGCAACTCTTACAAGGCCTTGAAGTTTCTTCAAGAAATGGTCAGGAAAGGAATGACTCCAAGTCAGGCTAGTTATAGTTCTACCATTGAAGTCCTCTGCAAGGACGGGAAGTCGACCGAGGCGAAGGAGTTACTTAAAGAGATGATCGAGAACGGTTTGGACCCA

Coding sequence (CDS)

ATCAGTGCTCATGTTCAATCTCAATTACCAGAACAATCCCTTAACCATTTCAAACTAATGGTCCTTAAAGGCCTTTGTCCGAGTTCAAACTCTTTCAATAATGTATTGGGTTTACTTACTAAGTCAGGGGATTTAAACAAAGCTTGGTGTTTTTTCAATGAATTTCTGGGGAGGACTCACTTTGATGTATATAGTTTTGGGATAATGATTAAAGCCTTTTGTGAAGGTGGCAATGTAAGTAAAGGTTTTGAGCTTTTGGCTCAAATGGAGAGGATGGGTTTGTCTCCCAATGTTGTTATATACACTATTTTGATTGATGCCTGCTGCAAAAATGGTGACATTGAGCAGGCTAAAGTATTGTTTTCGAAGATGGGTGACCTTGGTTTGGTTGCTAACCAATATACTTACACTGTGATGATCAATGGGTTGTTCAAGAAAGGATGTAAGAAGGATGGATTTGAGCTTTATGAGAAGATGAATCTTATTGGGGTGTTTCCTAGTGTATATACTTATAACAGTCTTATTAACGAGTATTGCAGGGATGGGACATTGTGTCTCGCATTTAAGTTGTTCGATGAAATGCGTACAAGAGGAGTATCGTGTAATGTAGTCACTTACAATATTCTGATTGGTGGATTATGTCGTAACAGACAAGTTCTGAAAGCAGAACGGTTGTTAGAGCAAATGAAACTAGCTCATATAAATCCATCTACTATAACATTTAACTTGTTGATGGATGGGTTCTGTAACGTTGGAAAGTTTGATAAGGCCTTAAGTTATTTTGATGAGTTGAAGTTGATTGGTCTGTCTCCAACTTCAGTGACCTACAACATTTTGATTGCAGGTTTCTCAAAAGCAGGAAATTCTGCTGTAGTTTGTGAGTTAGTGAGAGAGATGGAGGACAGAGGCATTTCTCCCTCCAAAGTAACATACACGATTCTGATGGACGCCTTTGTTCGATCAGACGATGTGGGGAAAGCCTCTCAGATGTTTCATCTCATGAAGAAAGTCGGTTCAGTCCCGGATCAGTATACATATGGTGTTCTAATGCATGGTTTGTGTATGAAAGGTAACATGGTAGAGGCATCAAAGCTGTATAAATCAATGATTGAGACGCATCTACAACCTAATGATGTTATCTATAATACAATGATAAATGGGTACTGCAAGGAGTGCAACTCTTACAAGGCCTTGAAGTTTCTTCAAGAAATGGTCAGGAAAGGAATGACTCCAAGTCAGGCTAGTTATAGTTCTACCATTGAAGTCCTCTGCAAGGACGGGAAGTCGACCGAGGCGAAGGAGTTACTTAAAGAGATGATCGAGAACGGTTTGGACCCA

Protein sequence

ISAHVQSQLPEQSLNHFKLMVLKGLCPSSNSFNNVLGLLTKSGDLNKAWCFFNEFLGRTHFDVYSFGIMIKAFCEGGNVSKGFELLAQMERMGLSPNVVIYTILIDACCKNGDIEQAKVLFSKMGDLGLVANQYTYTVMINGLFKKGCKKDGFELYEKMNLIGVFPSVYTYNSLINEYCRDGTLCLAFKLFDEMRTRGVSCNVVTYNILIGGLCRNRQVLKAERLLEQMKLAHINPSTITFNLLMDGFCNVGKFDKALSYFDELKLIGLSPTSVTYNILIAGFSKAGNSAVVCELVREMEDRGISPSKVTYTILMDAFVRSDDVGKASQMFHLMKKVGSVPDQYTYGVLMHGLCMKGNMVEASKLYKSMIETHLQPNDVIYNTMINGYCKECNSYKALKFLQEMVRKGMTPSQASYSSTIEVLCKDGKSTEAKELLKEMIENGLDP
Homology
BLAST of MS006488 vs. NCBI nr
Match: XP_022136943.1 (pentatricopeptide repeat-containing protein At4g11690 [Momordica charantia])

HSP 1 Score: 902.9 bits (2332), Expect = 1.1e-258
Identity = 445/446 (99.78%), Postives = 445/446 (99.78%), Query Frame = 0

Query: 1   ISAHVQSQLPEQSLNHFKLMVLKGLCPSSNSFNNVLGLLTKSGDLNKAWCFFNEFLGRTH 60
           ISAHVQSQLPEQSLNHFKLMVLKGLCPSSNSFNNVLGLLTKSGDLNKAWCFFNEFLGRTH
Sbjct: 66  ISAHVQSQLPEQSLNHFKLMVLKGLCPSSNSFNNVLGLLTKSGDLNKAWCFFNEFLGRTH 125

Query: 61  FDVYSFGIMIKAFCEGGNVSKGFELLAQMERMGLSPNVVIYTILIDACCKNGDIEQAKVL 120
           FDVYSFGIMIKAFCEGGNVSKGFELLAQMERMGLSPNVVIYTILIDACCKNGDIEQAKVL
Sbjct: 126 FDVYSFGIMIKAFCEGGNVSKGFELLAQMERMGLSPNVVIYTILIDACCKNGDIEQAKVL 185

Query: 121 FSKMGDLGLVANQYTYTVMINGLFKKGCKKDGFELYEKMNLIGVFPSVYTYNSLINEYCR 180
           FSKMGDLGLVANQYTYTVMINGLFKKGCKKDGFELYEKMNLIGVFPSVYTYNSLINEYCR
Sbjct: 186 FSKMGDLGLVANQYTYTVMINGLFKKGCKKDGFELYEKMNLIGVFPSVYTYNSLINEYCR 245

Query: 181 DGTLCLAFKLFDEMRTRGVSCNVVTYNILIGGLCRNRQVLKAERLLEQMKLAHINPSTIT 240
           DGTLCLAFKLFDEMRTRGVSCNVVTYNILIGGLCRNRQVLKAE LLEQMKLAHINPSTIT
Sbjct: 246 DGTLCLAFKLFDEMRTRGVSCNVVTYNILIGGLCRNRQVLKAEWLLEQMKLAHINPSTIT 305

Query: 241 FNLLMDGFCNVGKFDKALSYFDELKLIGLSPTSVTYNILIAGFSKAGNSAVVCELVREME 300
           FNLLMDGFCNVGKFDKALSYFDELKLIGLSPTSVTYNILIAGFSKAGNSAVVCELVREME
Sbjct: 306 FNLLMDGFCNVGKFDKALSYFDELKLIGLSPTSVTYNILIAGFSKAGNSAVVCELVREME 365

Query: 301 DRGISPSKVTYTILMDAFVRSDDVGKASQMFHLMKKVGSVPDQYTYGVLMHGLCMKGNMV 360
           DRGISPSKVTYTILMDAFVRSDDVGKASQMFHLMKKVGSVPDQYTYGVLMHGLCMKGNMV
Sbjct: 366 DRGISPSKVTYTILMDAFVRSDDVGKASQMFHLMKKVGSVPDQYTYGVLMHGLCMKGNMV 425

Query: 361 EASKLYKSMIETHLQPNDVIYNTMINGYCKECNSYKALKFLQEMVRKGMTPSQASYSSTI 420
           EASKLYKSMIETHLQPNDVIYNTMINGYCKECNSYKALKFLQEMVRKGMTPSQASYSSTI
Sbjct: 426 EASKLYKSMIETHLQPNDVIYNTMINGYCKECNSYKALKFLQEMVRKGMTPSQASYSSTI 485

Query: 421 EVLCKDGKSTEAKELLKEMIENGLDP 447
           EVLCKDGKSTEAKELLKEMIENGLDP
Sbjct: 486 EVLCKDGKSTEAKELLKEMIENGLDP 511

BLAST of MS006488 vs. NCBI nr
Match: XP_022971940.1 (pentatricopeptide repeat-containing protein At4g11690 [Cucurbita maxima])

HSP 1 Score: 766.9 bits (1979), Expect = 9.5e-218
Identity = 375/446 (84.08%), Postives = 406/446 (91.03%), Query Frame = 0

Query: 1   ISAHVQSQLPEQSLNHFKLMVLKGLCPSSNSFNNVLGLLTKSGDLNKAWCFFNEFLGRTH 60
           I+A +QSQL EQSL+ FKLM+L+G CPSS SFNNVLGLL KSGDL+K WCFF EFLGRT 
Sbjct: 43  INASLQSQLLEQSLHSFKLMILQGHCPSSISFNNVLGLLAKSGDLHKTWCFFTEFLGRTR 102

Query: 61  FDVYSFGIMIKAFCEGGNVSKGFELLAQMERMGLSPNVVIYTILIDACCKNGDIEQAKVL 120
           FD YSFGI IKAFC+ GNVSKGFELLAQMER+GLSPNVVIYTILIDACCKNGDIEQAKVL
Sbjct: 103 FDEYSFGITIKAFCKNGNVSKGFELLAQMERIGLSPNVVIYTILIDACCKNGDIEQAKVL 162

Query: 121 FSKMGDLGLVANQYTYTVMINGLFKKGCKKDGFELYEKMNLIGVFPSVYTYNSLINEYCR 180
           FSKM DLG VANQYTYT MING FKKG KKDGFELYEKM L+GV PS+YTYN+LINEYCR
Sbjct: 163 FSKMNDLGFVANQYTYTAMINGFFKKGYKKDGFELYEKMKLVGVLPSLYTYNTLINEYCR 222

Query: 181 DGTLCLAFKLFDEMRTRGVSCNVVTYNILIGGLCRNRQVLKAERLLEQMKLAHINPSTIT 240
           DG L +AFK+FDEM TRGVSCNVVTY ILIGGLCR RQ+ KAERL E+MK  HINP+T T
Sbjct: 223 DGKLSIAFKVFDEMSTRGVSCNVVTYTILIGGLCRKRQMSKAERLFERMKQVHINPTTRT 282

Query: 241 FNLLMDGFCNVGKFDKALSYFDELKLIGLSPTSVTYNILIAGFSKAGNSAVVCELVREME 300
           +NLLMDGFCN+GK +KAL YFD+LKLIGL+PTSV+YNILIAGFSKAGNSAVV ELVREME
Sbjct: 283 YNLLMDGFCNIGKLEKALGYFDKLKLIGLAPTSVSYNILIAGFSKAGNSAVVSELVREME 342

Query: 301 DRGISPSKVTYTILMDAFVRSDDVGKASQMFHLMKKVGSVPDQYTYGVLMHGLCMKGNMV 360
           DRGISPSKVTYTILMDAFVRSDDV KASQ+FHLMKKVGSVPDQ+TYGVLMHGLCMKGNMV
Sbjct: 343 DRGISPSKVTYTILMDAFVRSDDVEKASQLFHLMKKVGSVPDQHTYGVLMHGLCMKGNMV 402

Query: 361 EASKLYKSMIETHLQPNDVIYNTMINGYCKECNSYKALKFLQEMVRKGMTPSQASYSSTI 420
           EASKLYKSM+E +++PNDVIYN MINGYCKECNSYKALKFLQEMV KG+TPS ASYSSTI
Sbjct: 403 EASKLYKSMVEMNVEPNDVIYNIMINGYCKECNSYKALKFLQEMVNKGLTPSLASYSSTI 462

Query: 421 EVLCKDGKSTEAKELLKEMIENGLDP 447
           EVLC +GKSTEAK LLKEMIE GL+P
Sbjct: 463 EVLCNEGKSTEAKRLLKEMIEAGLNP 488

BLAST of MS006488 vs. NCBI nr
Match: XP_023511558.1 (pentatricopeptide repeat-containing protein At4g11690 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 752.7 bits (1942), Expect = 1.8e-213
Identity = 371/445 (83.37%), Postives = 399/445 (89.66%), Query Frame = 0

Query: 2   SAHVQSQLPEQSLNHFKLMVLKGLCPSSNSFNNVLGLLTKSGDLNKAWCFFNEFLGRTHF 61
           SA +QSQ  EQSLN FKLM+L+G CPSS SFNNVLGLL KSGDL+K W FF EFLGRTHF
Sbjct: 44  SASLQSQQLEQSLNSFKLMILQGQCPSSISFNNVLGLLAKSGDLHKTWWFFTEFLGRTHF 103

Query: 62  DVYSFGIMIKAFCEGGNVSKGFELLAQMERMGLSPNVVIYTILIDACCKNGDIEQAKVLF 121
           D YSFGI IKAFCE GNVSKGFELLAQMER+GLSPNVVIYTILIDACCKNGDIEQAKVLF
Sbjct: 104 DEYSFGITIKAFCENGNVSKGFELLAQMERIGLSPNVVIYTILIDACCKNGDIEQAKVLF 163

Query: 122 SKMGDLGLVANQYTYTVMINGLFKKGCKKDGFELYEKMNLIGVFPSVYTYNSLINEYCRD 181
           SKM DLGLVANQYTYT MING FKKG KKDGFE +EKM L+GV PS+YTYN+LINEYCRD
Sbjct: 164 SKMNDLGLVANQYTYTAMINGFFKKGYKKDGFEFFEKMKLVGVHPSLYTYNTLINEYCRD 223

Query: 182 GTLCLAFKLFDEMRTRGVSCNVVTYNILIGGLCRNRQVLKAERLLEQMKLAHINPSTITF 241
           G L +AFK+FDEM T GVSCNVVTY ILIGGLCR RQ+ KAERL E+MK   INP+T T+
Sbjct: 224 GKLSIAFKVFDEMSTSGVSCNVVTYTILIGGLCRKRQMSKAERLFERMKQVRINPTTRTY 283

Query: 242 NLLMDGFCNVGKFDKALSYFDELKLIGLSPTSVTYNILIAGFSKAGNSAVVCELVREMED 301
           NLLMDGFCN+GK +KAL YFDELKLIGL+PTSV+YNILIAGFSKAGNSAVV ELVREMED
Sbjct: 284 NLLMDGFCNIGKLEKALGYFDELKLIGLAPTSVSYNILIAGFSKAGNSAVVSELVREMED 343

Query: 302 RGISPSKVTYTILMDAFVRSDDVGKASQMFHLMKKVGSVPDQYTYGVLMHGLCMKGNMVE 361
           RGISPSKVTYTILMDAFVRSDDV KASQ+ HLMKKVGSVPDQ+TYGVLMHGLCMKGNMVE
Sbjct: 344 RGISPSKVTYTILMDAFVRSDDVEKASQLLHLMKKVGSVPDQHTYGVLMHGLCMKGNMVE 403

Query: 362 ASKLYKSMIETHLQPNDVIYNTMINGYCKECNSYKALKFLQEMVRKGMTPSQASYSSTIE 421
           ASKLY SM+E +++PNDVIYN MINGYCKECNSYKALKFLQEMV KG+TPS ASYSSTIE
Sbjct: 404 ASKLYNSMVEMNVEPNDVIYNIMINGYCKECNSYKALKFLQEMVNKGLTPSLASYSSTIE 463

Query: 422 VLCKDGKSTEAKELLKEMIENGLDP 447
           VL  +GKSTEAK LLKEMIE GL+P
Sbjct: 464 VLYNEGKSTEAKRLLKEMIEAGLNP 488

BLAST of MS006488 vs. NCBI nr
Match: XP_038887006.1 (pentatricopeptide repeat-containing protein At4g11690 [Benincasa hispida])

HSP 1 Score: 748.4 bits (1931), Expect = 3.5e-212
Identity = 369/446 (82.74%), Postives = 401/446 (89.91%), Query Frame = 0

Query: 1   ISAHVQSQLPEQSLNHFKLMVLKGLCPSSNSFNNVLGLLTKSGDLNKAWCFFNEFLGRTH 60
           I+A +QSQ  EQSL++FKLMVLKG CPSS+SFNNVLG L KSG+L++ W FF+EFL RT 
Sbjct: 50  INASLQSQPLEQSLHNFKLMVLKGYCPSSSSFNNVLGQLAKSGNLHRTWWFFSEFLERTQ 109

Query: 61  FDVYSFGIMIKAFCEGGNVSKGFELLAQMERMGLSPNVVIYTILIDACCKNGDIEQAKVL 120
           FDVYSFGI IKAFCE GN+SKGF+LLAQMERMGLS NVVIYTILIDACCKNGDIEQAKVL
Sbjct: 110 FDVYSFGITIKAFCENGNISKGFDLLAQMERMGLSANVVIYTILIDACCKNGDIEQAKVL 169

Query: 121 FSKMGDLGLVANQYTYTVMINGLFKKGCKKDGFELYEKMNLIGVFPSVYTYNSLINEYCR 180
           FS+M DLGLVAN YTYTVMING FKKG +KDGFELYEKM L+GV P++YTYNSLINEYCR
Sbjct: 170 FSRMDDLGLVANHYTYTVMINGFFKKGYQKDGFELYEKMKLVGVLPTLYTYNSLINEYCR 229

Query: 181 DGTLCLAFKLFDEMRTRGVSCNVVTYNILIGGLCRNRQVLKAERLLEQMKLAHINPSTIT 240
           DG L LAFKLFDEM TRGVSCNV+TYNILIGGLCR RQV KAE LLEQMK AHINP+T T
Sbjct: 230 DGKLSLAFKLFDEMSTRGVSCNVITYNILIGGLCRKRQVSKAEWLLEQMKQAHINPTTRT 289

Query: 241 FNLLMDGFCNVGKFDKALSYFDELKLIGLSPTSVTYNILIAGFSKAGNSAVVCELVREME 300
           FNLL+DG CN GK DKALSYFD++KLIG SPTSVTYNILIAGFSK GNS+VV ELVREME
Sbjct: 290 FNLLIDGLCNTGKLDKALSYFDKMKLIGQSPTSVTYNILIAGFSKVGNSSVVSELVREME 349

Query: 301 DRGISPSKVTYTILMDAFVRSDDVGKASQMFHLMKKVGSVPDQYTYGVLMHGLCMKGNMV 360
           DRGISPSKVTYTILM AFVRSDDV KA +MF LMKK+GSVPDQ+TYGVL+HGLCMKGNMV
Sbjct: 350 DRGISPSKVTYTILMHAFVRSDDVEKAYEMFRLMKKIGSVPDQHTYGVLIHGLCMKGNMV 409

Query: 361 EASKLYKSMIETHLQPNDVIYNTMINGYCKECNSYKALKFLQEMVRKGMTPSQASYSSTI 420
           EASKLYKSM+E HL+PNDVIYNTMINGYCKECNSYKALKFL+EMV+KG+TPS ASYS TI
Sbjct: 410 EASKLYKSMVEMHLEPNDVIYNTMINGYCKECNSYKALKFLEEMVKKGVTPSVASYSFTI 469

Query: 421 EVLCKDGKSTEAKELLKEMIENGLDP 447
            VLC +GKSTEAK LLKEMIE GL P
Sbjct: 470 AVLCNEGKSTEAKHLLKEMIEAGLKP 495

BLAST of MS006488 vs. NCBI nr
Match: KAG7011560.1 (Pentatricopeptide repeat-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 748.0 bits (1930), Expect = 4.5e-212
Identity = 367/445 (82.47%), Postives = 399/445 (89.66%), Query Frame = 0

Query: 2   SAHVQSQLPEQSLNHFKLMVLKGLCPSSNSFNNVLGLLTKSGDLNKAWCFFNEFLGRTHF 61
           SA +QSQ  EQSLN FKLM+L+G CPS+ SFNNVLGLL KSGDL+K W FF EFLGRTHF
Sbjct: 12  SASLQSQQLEQSLNSFKLMILQGHCPSAISFNNVLGLLAKSGDLHKTWWFFTEFLGRTHF 71

Query: 62  DVYSFGIMIKAFCEGGNVSKGFELLAQMERMGLSPNVVIYTILIDACCKNGDIEQAKVLF 121
           D YSFGI IKAFC+ GNVSKGFELLAQMER+GLSPNVVIYTILIDACCKNGDIEQAKVLF
Sbjct: 72  DEYSFGITIKAFCKNGNVSKGFELLAQMERIGLSPNVVIYTILIDACCKNGDIEQAKVLF 131

Query: 122 SKMGDLGLVANQYTYTVMINGLFKKGCKKDGFELYEKMNLIGVFPSVYTYNSLINEYCRD 181
           SKM DLGLVANQYTYT MING FKKG KKDGFEL+EKM L+GV PS+YTYN+LINEYCRD
Sbjct: 132 SKMNDLGLVANQYTYTAMINGFFKKGYKKDGFELFEKMKLVGVLPSLYTYNTLINEYCRD 191

Query: 182 GTLCLAFKLFDEMRTRGVSCNVVTYNILIGGLCRNRQVLKAERLLEQMKLAHINPSTITF 241
           G L +AFK+FDEM T GVSCNVVTY ILIGGLCR RQ+ KAERL E+MK   INP+T T+
Sbjct: 192 GKLSIAFKVFDEMSTSGVSCNVVTYTILIGGLCRKRQLTKAERLFERMKQVRINPTTRTY 251

Query: 242 NLLMDGFCNVGKFDKALSYFDELKLIGLSPTSVTYNILIAGFSKAGNSAVVCELVREMED 301
           NLLMDGFCN+GK +KAL YFDELKLIGL+PTSV+YNILIAGFSKAGNS+VV ELVREMED
Sbjct: 252 NLLMDGFCNIGKLEKALGYFDELKLIGLAPTSVSYNILIAGFSKAGNSSVVSELVREMED 311

Query: 302 RGISPSKVTYTILMDAFVRSDDVGKASQMFHLMKKVGSVPDQYTYGVLMHGLCMKGNMVE 361
           RG+SPSKVTYTILMDAFVRSDDV KASQ+FHLMKKVGSVPDQ+TYGVLMHGLCMKGNMVE
Sbjct: 312 RGVSPSKVTYTILMDAFVRSDDVEKASQLFHLMKKVGSVPDQHTYGVLMHGLCMKGNMVE 371

Query: 362 ASKLYKSMIETHLQPNDVIYNTMINGYCKECNSYKALKFLQEMVRKGMTPSQASYSSTIE 421
           ASKLY SM+E +++PNDVIYN MINGYCKECNSYKALKFLQEMV KG+TPS  SY STIE
Sbjct: 372 ASKLYNSMVEMNVEPNDVIYNIMINGYCKECNSYKALKFLQEMVNKGLTPSLTSYKSTIE 431

Query: 422 VLCKDGKSTEAKELLKEMIENGLDP 447
           VL  +GKSTEAK LLKEMIE GL+P
Sbjct: 432 VLYNEGKSTEAKCLLKEMIEAGLNP 456

BLAST of MS006488 vs. ExPASy Swiss-Prot
Match: Q9T0D6 (Pentatricopeptide repeat-containing protein At4g11690 OS=Arabidopsis thaliana OX=3702 GN=At4g11690 PE=2 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 2.0e-146
Identity = 252/446 (56.50%), Postives = 333/446 (74.66%), Query Frame = 0

Query: 1   ISAHVQSQLPEQSLNHFKLMVLKGLCPSSNSFNNVLGLLTKSGDLNKAWCFFNEFLGRTH 60
           I+++VQSQ    S+++F  MV  G  P SN FN +L  +  S   N+ W FFNE   +  
Sbjct: 101 INSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVV 160

Query: 61  FDVYSFGIMIKAFCEGGNVSKGFELLAQMERMGLSPNVVIYTILIDACCKNGDIEQAKVL 120
            DVYSFGI+IK  CE G + K F+LL ++   G SPNVVIYT LID CCK G+IE+AK L
Sbjct: 161 LDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDL 220

Query: 121 FSKMGDLGLVANQYTYTVMINGLFKKGCKKDGFELYEKMNLIGVFPSVYTYNSLINEYCR 180
           F +MG LGLVAN+ TYTV+INGLFK G KK GFE+YEKM   GVFP++YTYN ++N+ C+
Sbjct: 221 FFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCK 280

Query: 181 DGTLCLAFKLFDEMRTRGVSCNVVTYNILIGGLCRNRQVLKAERLLEQMKLAHINPSTIT 240
           DG    AF++FDEMR RGVSCN+VTYN LIGGLCR  ++ +A ++++QMK   INP+ IT
Sbjct: 281 DGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLIT 340

Query: 241 FNLLMDGFCNVGKFDKALSYFDELKLIGLSPTSVTYNILIAGFSKAGNSAVVCELVREME 300
           +N L+DGFC VGK  KALS   +LK  GLSP+ VTYNIL++GF + G+++   ++V+EME
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEME 400

Query: 301 DRGISPSKVTYTILMDAFVRSDDVGKASQMFHLMKKVGSVPDQYTYGVLMHGLCMKGNMV 360
           +RGI PSKVTYTIL+D F RSD++ KA Q+   M+++G VPD +TY VL+HG C+KG M 
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMN 460

Query: 361 EASKLYKSMIETHLQPNDVIYNTMINGYCKECNSYKALKFLQEMVRKGMTPSQASYSSTI 420
           EAS+L+KSM+E + +PN+VIYNTMI GYCKE +SY+ALK L+EM  K + P+ ASY   I
Sbjct: 461 EASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520

Query: 421 EVLCKDGKSTEAKELLKEMIENGLDP 447
           EVLCK+ KS EA+ L+++MI++G+DP
Sbjct: 521 EVLCKERKSKEAERLVEKMIDSGIDP 546

BLAST of MS006488 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.9e-64
Identity = 147/441 (33.33%), Postives = 230/441 (52.15%), Query Frame = 0

Query: 1   ISAHVQSQLPEQSLNHFKLMVLKGLCPSSNSFNNVLGLLTKS-GDLNKAWCFFNEFL-GR 60
           + ++ +  L +++L+   L    G  P   S+N VL    +S  +++ A   F E L  +
Sbjct: 141 VKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQ 200

Query: 61  THFDVYSFGIMIKAFCEGGNVSKGFELLAQMERMGLSPNVVIYTILIDACCKNGDIEQAK 120
              +V+++ I+I+ FC  GN+     L  +ME  G  PNVV Y  LID  CK   I+   
Sbjct: 201 VSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGF 260

Query: 121 VLFSKMGDLGLVANQYTYTVMINGLFKKGCKKDGFELYEKMNLIGVFPSVYTYNSLINEY 180
            L   M   GL  N  +Y V+INGL ++G  K+   +  +MN  G      TYN+LI  Y
Sbjct: 261 KLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGY 320

Query: 181 CRDGTLCLAFKLFDEMRTRGVSCNVVTYNILIGGLCRNRQVLKAERLLEQMKLAHINPST 240
           C++G    A  +  EM   G++ +V+TY  LI  +C+   + +A   L+QM++  + P+ 
Sbjct: 321 CKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNE 380

Query: 241 ITFNLLMDGFCNVGKFDKALSYFDELKLIGLSPTSVTYNILIAGFSKAGNSAVVCELVRE 300
            T+  L+DGF   G  ++A     E+   G SP+ VTYN LI G    G       ++ +
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLED 440

Query: 301 MEDRGISPSKVTYTILMDAFVRSDDVGKASQMFHLMKKVGSVPDQYTYGVLMHGLCMKGN 360
           M+++G+SP  V+Y+ ++  F RS DV +A ++   M + G  PD  TY  L+ G C +  
Sbjct: 441 MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR 500

Query: 361 MVEASKLYKSMIETHLQPNDVIYNTMINGYCKECNSYKALKFLQEMVRKGMTPSQASYSS 420
             EA  LY+ M+   L P++  Y  +IN YC E +  KAL+   EMV KG+ P   +YS 
Sbjct: 501 TKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSV 560

Query: 421 TIEVLCKDGKSTEAKELLKEM 440
            I  L K  ++ EAK LL ++
Sbjct: 561 LINGLNKQSRTREAKRLLLKL 581

BLAST of MS006488 vs. ExPASy Swiss-Prot
Match: Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 2.8e-63
Identity = 130/421 (30.88%), Postives = 222/421 (52.73%), Query Frame = 0

Query: 24  GLCPSSNSFNNVLGLLTKSGDLNKAWCFFNEFLGRTHFDVYSFGIMIKAFCEGGNVSKGF 83
           G  P   ++N ++    K+G++N A    +        DV ++  ++++ C+ G + +  
Sbjct: 167 GAVPDVITYNVMISGYCKAGEINNALSVLDRM--SVSPDVVTYNTILRSLCDSGKLKQAM 226

Query: 84  ELLAQMERMGLSPNVVIYTILIDACCKNGDIEQAKVLFSKMGDLGLVANQYTYTVMINGL 143
           E+L +M +    P+V+ YTILI+A C++  +  A  L  +M D G   +  TY V++NG+
Sbjct: 227 EVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI 286

Query: 144 FKKGCKKDGFELYEKMNLIGVFPSVYTYNSLINEYCRDGTLCLAFKLFDEMRTRGVSCNV 203
            K+G   +  +    M   G  P+V T+N ++   C  G    A KL  +M  +G S +V
Sbjct: 287 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 346

Query: 204 VTYNILIGGLCRNRQVLKAERLLEQMKLAHINPSTITFNLLMDGFCNVGKFDKALSYFDE 263
           VT+NILI  LCR   + +A  +LE+M      P+++++N L+ GFC   K D+A+ Y + 
Sbjct: 347 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 406

Query: 264 LKLIGLSPTSVTYNILIAGFSKAGNSAVVCELVREMEDRGISPSKVTYTILMDAFVRSDD 323
           +   G  P  VTYN ++    K G      E++ ++  +G SP  +TY  ++D   ++  
Sbjct: 407 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 466

Query: 324 VGKASQMFHLMKKVGSVPDQYTYGVLMHGLCMKGNMVEASKLYKSMIETHLQPNDVIYNT 383
            GKA ++   M+     PD  TY  L+ GL  +G + EA K +       ++PN V +N+
Sbjct: 467 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 526

Query: 384 MINGYCKECNSYKALKFLQEMVRKGMTPSQASYSSTIEVLCKDGKSTEAKELLKEMIENG 443
           ++ G CK   + +A+ FL  M+ +G  P++ SY+  IE L  +G + EA ELL E+   G
Sbjct: 527 IMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 585

Query: 444 L 445
           L
Sbjct: 587 L 585

BLAST of MS006488 vs. ExPASy Swiss-Prot
Match: Q9SXD1 (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62670 PE=3 SV=2)

HSP 1 Score: 241.9 bits (616), Expect = 1.4e-62
Identity = 128/421 (30.40%), Postives = 229/421 (54.39%), Query Frame = 0

Query: 20  MVLKGLCPSSNSFNNVLGLLTKSGDLNKAWCFFNEFLGR-THFDVYSFGIMIKAFCEGGN 79
           M + G  P++ +FN ++  L      ++A    +  + +    D+ ++G+++   C+ G+
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236

Query: 80  VSKGFELLAQMERMGLSPNVVIYTILIDACCKNGDIEQAKVLFSKMGDLGLVANQYTYTV 139
               F LL +ME+  L P V+IY  +ID  CK   ++ A  LF +M   G+  N  TY+ 
Sbjct: 237 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 296

Query: 140 MINGLFKKGCKKDGFELYEKMNLIGVFPSVYTYNSLINEYCRDGTLCLAFKLFDEMRTRG 199
           +I+ L   G   D   L   M    + P V+T+++LI+ + ++G L  A KL+DEM  R 
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356

Query: 200 VSCNVVTYNILIGGLCRNRQVLKAERLLEQMKLAHINPSTITFNLLMDGFCNVGKFDKAL 259
           +  ++VTY+ LI G C + ++ +A+++ E M   H  P  +T+N L+ GFC   + ++ +
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 416

Query: 260 SYFDELKLIGLSPTSVTYNILIAGFSKAGNSAVVCELVREMEDRGISPSKVTYTILMDAF 319
             F E+   GL   +VTYNILI G  +AG+  +  E+ +EM   G+ P+ +TY  L+D  
Sbjct: 417 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476

Query: 320 VRSDDVGKASQMFHLMKKVGSVPDQYTYGVLMHGLCMKGNMVEASKLYKSMIETHLQPND 379
            ++  + KA  +F  +++    P  YTY +++ G+C  G + +   L+ ++    ++P+ 
Sbjct: 477 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 536

Query: 380 VIYNTMINGYCKECNSYKALKFLQEMVRKGMTPSQASYSSTIEVLCKDGKSTEAKELLKE 439
           V YNTMI+G+C++ +  +A    +EM   G  P+   Y++ I    +DG    + EL+KE
Sbjct: 537 VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 596

BLAST of MS006488 vs. ExPASy Swiss-Prot
Match: Q9FJE6 (Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana OX=3702 GN=At5g59900 PE=3 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 3.4e-61
Identity = 144/435 (33.10%), Postives = 227/435 (52.18%), Query Frame = 0

Query: 1   ISAHVQSQLPEQSLNHFKLMVLK-GLCPSSNSFNNVLGLLTKSGDLNKAWCFFNEFLG-R 60
           I  +V+S+     +  FK+M+ K  L P   + + +L  L K      A   FN+ +   
Sbjct: 163 IQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVG 222

Query: 61  THFDVYSFGIMIKAFCEGGNVSKGFELLAQMERMGLSPNVVIYTILIDACCKNGDIEQAK 120
              DVY +  +I++ CE  ++S+  E++A ME  G   N+V Y +LID  CK   + +A 
Sbjct: 223 IRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAV 282

Query: 121 VLFSKMGDLGLVANQYTYTVMINGLFKKGCKKDGFELYEKMNLIGVFPSVYTYNSLINEY 180
            +   +    L  +  TY  ++ GL K    + G E+ ++M  +   PS    +SL+   
Sbjct: 283 GIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGL 342

Query: 181 CRDGTLCLAFKLFDEMRTRGVSCNVVTYNILIGGLCRNRQVLKAERLLEQMKLAHINPST 240
            + G +  A  L   +   GVS N+  YN LI  LC+ R+  +AE L ++M    + P+ 
Sbjct: 343 RKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPND 402

Query: 241 ITFNLLMDGFCNVGKFDKALSYFDELKLIGLSPTSVTYNILIAGFSKAGNSAVVCELVRE 300
           +T+++L+D FC  GK D ALS+  E+   GL  +   YN LI G  K G+ +     + E
Sbjct: 403 VTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAE 462

Query: 301 MEDRGISPSKVTYTILMDAFVRSDDVGKASQMFHLMKKVGSVPDQYTYGVLMHGLCMKGN 360
           M ++ + P+ VTYT LM  +     + KA +++H M   G  P  YT+  L+ GL   G 
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGL 522

Query: 361 MVEASKLYKSMIETHLQPNDVIYNTMINGYCKECNSYKALKFLQEMVRKGMTPSQASYSS 420
           + +A KL+  M E +++PN V YN MI GYC+E +  KA +FL+EM  KG+ P   SY  
Sbjct: 523 IRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRP 582

Query: 421 TIEVLCKDGKSTEAK 434
            I  LC  G+++EAK
Sbjct: 583 LIHGLCLTGQASEAK 597

BLAST of MS006488 vs. ExPASy TrEMBL
Match: A0A6J1C8X2 (pentatricopeptide repeat-containing protein At4g11690 OS=Momordica charantia OX=3673 GN=LOC111008514 PE=4 SV=1)

HSP 1 Score: 902.9 bits (2332), Expect = 5.3e-259
Identity = 445/446 (99.78%), Postives = 445/446 (99.78%), Query Frame = 0

Query: 1   ISAHVQSQLPEQSLNHFKLMVLKGLCPSSNSFNNVLGLLTKSGDLNKAWCFFNEFLGRTH 60
           ISAHVQSQLPEQSLNHFKLMVLKGLCPSSNSFNNVLGLLTKSGDLNKAWCFFNEFLGRTH
Sbjct: 66  ISAHVQSQLPEQSLNHFKLMVLKGLCPSSNSFNNVLGLLTKSGDLNKAWCFFNEFLGRTH 125

Query: 61  FDVYSFGIMIKAFCEGGNVSKGFELLAQMERMGLSPNVVIYTILIDACCKNGDIEQAKVL 120
           FDVYSFGIMIKAFCEGGNVSKGFELLAQMERMGLSPNVVIYTILIDACCKNGDIEQAKVL
Sbjct: 126 FDVYSFGIMIKAFCEGGNVSKGFELLAQMERMGLSPNVVIYTILIDACCKNGDIEQAKVL 185

Query: 121 FSKMGDLGLVANQYTYTVMINGLFKKGCKKDGFELYEKMNLIGVFPSVYTYNSLINEYCR 180
           FSKMGDLGLVANQYTYTVMINGLFKKGCKKDGFELYEKMNLIGVFPSVYTYNSLINEYCR
Sbjct: 186 FSKMGDLGLVANQYTYTVMINGLFKKGCKKDGFELYEKMNLIGVFPSVYTYNSLINEYCR 245

Query: 181 DGTLCLAFKLFDEMRTRGVSCNVVTYNILIGGLCRNRQVLKAERLLEQMKLAHINPSTIT 240
           DGTLCLAFKLFDEMRTRGVSCNVVTYNILIGGLCRNRQVLKAE LLEQMKLAHINPSTIT
Sbjct: 246 DGTLCLAFKLFDEMRTRGVSCNVVTYNILIGGLCRNRQVLKAEWLLEQMKLAHINPSTIT 305

Query: 241 FNLLMDGFCNVGKFDKALSYFDELKLIGLSPTSVTYNILIAGFSKAGNSAVVCELVREME 300
           FNLLMDGFCNVGKFDKALSYFDELKLIGLSPTSVTYNILIAGFSKAGNSAVVCELVREME
Sbjct: 306 FNLLMDGFCNVGKFDKALSYFDELKLIGLSPTSVTYNILIAGFSKAGNSAVVCELVREME 365

Query: 301 DRGISPSKVTYTILMDAFVRSDDVGKASQMFHLMKKVGSVPDQYTYGVLMHGLCMKGNMV 360
           DRGISPSKVTYTILMDAFVRSDDVGKASQMFHLMKKVGSVPDQYTYGVLMHGLCMKGNMV
Sbjct: 366 DRGISPSKVTYTILMDAFVRSDDVGKASQMFHLMKKVGSVPDQYTYGVLMHGLCMKGNMV 425

Query: 361 EASKLYKSMIETHLQPNDVIYNTMINGYCKECNSYKALKFLQEMVRKGMTPSQASYSSTI 420
           EASKLYKSMIETHLQPNDVIYNTMINGYCKECNSYKALKFLQEMVRKGMTPSQASYSSTI
Sbjct: 426 EASKLYKSMIETHLQPNDVIYNTMINGYCKECNSYKALKFLQEMVRKGMTPSQASYSSTI 485

Query: 421 EVLCKDGKSTEAKELLKEMIENGLDP 447
           EVLCKDGKSTEAKELLKEMIENGLDP
Sbjct: 486 EVLCKDGKSTEAKELLKEMIENGLDP 511

BLAST of MS006488 vs. ExPASy TrEMBL
Match: A0A6J1I748 (pentatricopeptide repeat-containing protein At4g11690 OS=Cucurbita maxima OX=3661 GN=LOC111470611 PE=4 SV=1)

HSP 1 Score: 766.9 bits (1979), Expect = 4.6e-218
Identity = 375/446 (84.08%), Postives = 406/446 (91.03%), Query Frame = 0

Query: 1   ISAHVQSQLPEQSLNHFKLMVLKGLCPSSNSFNNVLGLLTKSGDLNKAWCFFNEFLGRTH 60
           I+A +QSQL EQSL+ FKLM+L+G CPSS SFNNVLGLL KSGDL+K WCFF EFLGRT 
Sbjct: 43  INASLQSQLLEQSLHSFKLMILQGHCPSSISFNNVLGLLAKSGDLHKTWCFFTEFLGRTR 102

Query: 61  FDVYSFGIMIKAFCEGGNVSKGFELLAQMERMGLSPNVVIYTILIDACCKNGDIEQAKVL 120
           FD YSFGI IKAFC+ GNVSKGFELLAQMER+GLSPNVVIYTILIDACCKNGDIEQAKVL
Sbjct: 103 FDEYSFGITIKAFCKNGNVSKGFELLAQMERIGLSPNVVIYTILIDACCKNGDIEQAKVL 162

Query: 121 FSKMGDLGLVANQYTYTVMINGLFKKGCKKDGFELYEKMNLIGVFPSVYTYNSLINEYCR 180
           FSKM DLG VANQYTYT MING FKKG KKDGFELYEKM L+GV PS+YTYN+LINEYCR
Sbjct: 163 FSKMNDLGFVANQYTYTAMINGFFKKGYKKDGFELYEKMKLVGVLPSLYTYNTLINEYCR 222

Query: 181 DGTLCLAFKLFDEMRTRGVSCNVVTYNILIGGLCRNRQVLKAERLLEQMKLAHINPSTIT 240
           DG L +AFK+FDEM TRGVSCNVVTY ILIGGLCR RQ+ KAERL E+MK  HINP+T T
Sbjct: 223 DGKLSIAFKVFDEMSTRGVSCNVVTYTILIGGLCRKRQMSKAERLFERMKQVHINPTTRT 282

Query: 241 FNLLMDGFCNVGKFDKALSYFDELKLIGLSPTSVTYNILIAGFSKAGNSAVVCELVREME 300
           +NLLMDGFCN+GK +KAL YFD+LKLIGL+PTSV+YNILIAGFSKAGNSAVV ELVREME
Sbjct: 283 YNLLMDGFCNIGKLEKALGYFDKLKLIGLAPTSVSYNILIAGFSKAGNSAVVSELVREME 342

Query: 301 DRGISPSKVTYTILMDAFVRSDDVGKASQMFHLMKKVGSVPDQYTYGVLMHGLCMKGNMV 360
           DRGISPSKVTYTILMDAFVRSDDV KASQ+FHLMKKVGSVPDQ+TYGVLMHGLCMKGNMV
Sbjct: 343 DRGISPSKVTYTILMDAFVRSDDVEKASQLFHLMKKVGSVPDQHTYGVLMHGLCMKGNMV 402

Query: 361 EASKLYKSMIETHLQPNDVIYNTMINGYCKECNSYKALKFLQEMVRKGMTPSQASYSSTI 420
           EASKLYKSM+E +++PNDVIYN MINGYCKECNSYKALKFLQEMV KG+TPS ASYSSTI
Sbjct: 403 EASKLYKSMVEMNVEPNDVIYNIMINGYCKECNSYKALKFLQEMVNKGLTPSLASYSSTI 462

Query: 421 EVLCKDGKSTEAKELLKEMIENGLDP 447
           EVLC +GKSTEAK LLKEMIE GL+P
Sbjct: 463 EVLCNEGKSTEAKRLLKEMIEAGLNP 488

BLAST of MS006488 vs. ExPASy TrEMBL
Match: A0A6J1GM09 (pentatricopeptide repeat-containing protein At4g11690 OS=Cucurbita moschata OX=3662 GN=LOC111455596 PE=4 SV=1)

HSP 1 Score: 748.0 bits (1930), Expect = 2.2e-212
Identity = 367/445 (82.47%), Postives = 399/445 (89.66%), Query Frame = 0

Query: 2   SAHVQSQLPEQSLNHFKLMVLKGLCPSSNSFNNVLGLLTKSGDLNKAWCFFNEFLGRTHF 61
           SA +QSQ  EQSLN FKLM+L+G CPS+ SFNNVLGLL KSGDL+K W FF EFLGRTHF
Sbjct: 44  SASLQSQQLEQSLNSFKLMILQGHCPSAISFNNVLGLLAKSGDLHKTWWFFTEFLGRTHF 103

Query: 62  DVYSFGIMIKAFCEGGNVSKGFELLAQMERMGLSPNVVIYTILIDACCKNGDIEQAKVLF 121
           D YSFGI IKAFC+ GNVSKGFELLAQMER+GLSPNVVIYTILIDACCKNGDIEQAKVLF
Sbjct: 104 DEYSFGITIKAFCKNGNVSKGFELLAQMERIGLSPNVVIYTILIDACCKNGDIEQAKVLF 163

Query: 122 SKMGDLGLVANQYTYTVMINGLFKKGCKKDGFELYEKMNLIGVFPSVYTYNSLINEYCRD 181
           SKM DLGLVANQYTYT MING FKKG KKDGFEL+EKM L+GV PS+YTYN+LINEYCRD
Sbjct: 164 SKMNDLGLVANQYTYTAMINGFFKKGYKKDGFELFEKMKLVGVLPSLYTYNTLINEYCRD 223

Query: 182 GTLCLAFKLFDEMRTRGVSCNVVTYNILIGGLCRNRQVLKAERLLEQMKLAHINPSTITF 241
           G L +AFK+FDEM T GVSCNVVTY ILIGGLCR RQ+ KAERL E+MK   INP+T T+
Sbjct: 224 GKLSIAFKVFDEMSTSGVSCNVVTYTILIGGLCRKRQLTKAERLFERMKQVRINPTTRTY 283

Query: 242 NLLMDGFCNVGKFDKALSYFDELKLIGLSPTSVTYNILIAGFSKAGNSAVVCELVREMED 301
           NLLMDGFCN+GK +KAL YFDELKLIGL+PTSV+YNILIAGFSKAGNS+VV ELVREMED
Sbjct: 284 NLLMDGFCNIGKLEKALGYFDELKLIGLAPTSVSYNILIAGFSKAGNSSVVSELVREMED 343

Query: 302 RGISPSKVTYTILMDAFVRSDDVGKASQMFHLMKKVGSVPDQYTYGVLMHGLCMKGNMVE 361
           RG+SPSKVTYTILMDAFVRSDDV KASQ+FHLMKKVGSVPDQ+TYGVLMHGLCMKGNMVE
Sbjct: 344 RGVSPSKVTYTILMDAFVRSDDVEKASQLFHLMKKVGSVPDQHTYGVLMHGLCMKGNMVE 403

Query: 362 ASKLYKSMIETHLQPNDVIYNTMINGYCKECNSYKALKFLQEMVRKGMTPSQASYSSTIE 421
           ASKLY SM+E +++PNDVIYN MINGYCKECNSYKALKFLQEMV KG+TPS  SY STIE
Sbjct: 404 ASKLYNSMVEMNVEPNDVIYNIMINGYCKECNSYKALKFLQEMVNKGLTPSLTSYKSTIE 463

Query: 422 VLCKDGKSTEAKELLKEMIENGLDP 447
           VL  +GKSTEAK LLKEMIE GL+P
Sbjct: 464 VLYNEGKSTEAKCLLKEMIEAGLNP 488

BLAST of MS006488 vs. ExPASy TrEMBL
Match: A0A5D3C6B4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001850 PE=4 SV=1)

HSP 1 Score: 716.8 bits (1849), Expect = 5.4e-203
Identity = 352/446 (78.92%), Postives = 390/446 (87.44%), Query Frame = 0

Query: 1   ISAHVQSQLPEQSLNHFKLMVLKGLCPSSNSFNNVLGLLTKSGDLNKAWCFFNEFLGRTH 60
           I+A +QS   EQSL+ FKLMVLKG  PSS SFNNVL LL KSG+L++ W FF E+LGRT 
Sbjct: 50  INASLQSPQLEQSLDSFKLMVLKGHSPSSYSFNNVLDLLAKSGNLDRTWWFFTEYLGRTQ 109

Query: 61  FDVYSFGIMIKAFCEGGNVSKGFELLAQMERMGLSPNVVIYTILIDACCKNGDIEQAKVL 120
           FDVYSFGI IKAFCE GNVSKGFELLAQME MG+SPNV IYTILI+ACCKNGDI+QAKV+
Sbjct: 110 FDVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCKNGDIDQAKVM 169

Query: 121 FSKMGDLGLVANQYTYTVMINGLFKKGCKKDGFELYEKMNLIGVFPSVYTYNSLINEYCR 180
           FS+M DLGL A+QY YTVMING FKKG KKDGFELYEKM L+GV P++YTYNSLI EYCR
Sbjct: 170 FSRMDDLGLAADQYIYTVMINGFFKKGYKKDGFELYEKMKLMGVLPNLYTYNSLITEYCR 229

Query: 181 DGTLCLAFKLFDEMRTRGVSCNVVTYNILIGGLCRNRQVLKAERLLEQMKLAHINPSTIT 240
           DG L LAFKLFDE+  RGV+CN VTYNILIGGLCR  QVLKAE LLE+MK AHINP+T T
Sbjct: 230 DGKLSLAFKLFDEISKRGVACNAVTYNILIGGLCRKGQVLKAEGLLERMKRAHINPTTRT 289

Query: 241 FNLLMDGFCNVGKFDKALSYFDELKLIGLSPTSVTYNILIAGFSKAGNSAVVCELVREME 300
           FNLLMDG CN GK DKALSY D+LKLIG SPT VTYNILI+GFSK GNS+VV ELVREME
Sbjct: 290 FNLLMDGLCNTGKLDKALSYLDKLKLIGQSPTLVTYNILISGFSKVGNSSVVSELVREME 349

Query: 301 DRGISPSKVTYTILMDAFVRSDDVGKASQMFHLMKKVGSVPDQYTYGVLMHGLCMKGNMV 360
           DRGISPSKVTYTILMDAFVRSDD+ KA +MFHLMK++G VPDQ+TYGVL+HGLC++GNMV
Sbjct: 350 DRGISPSKVTYTILMDAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIRGNMV 409

Query: 361 EASKLYKSMIETHLQPNDVIYNTMINGYCKECNSYKALKFLQEMVRKGMTPSQASYSSTI 420
           EASKLYKSM+E HL+PNDVIYNTMINGYCKECNSYKALKFL+EMV+ G+TP+ ASY STI
Sbjct: 410 EASKLYKSMVEMHLEPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTI 469

Query: 421 EVLCKDGKSTEAKELLKEMIENGLDP 447
           +VLCKDGKS EAK LLKEM E GL P
Sbjct: 470 QVLCKDGKSIEAKRLLKEMTEAGLKP 495

BLAST of MS006488 vs. ExPASy TrEMBL
Match: A0A1S3C0B2 (pentatricopeptide repeat-containing protein At4g11690 OS=Cucumis melo OX=3656 GN=LOC103495373 PE=4 SV=1)

HSP 1 Score: 716.8 bits (1849), Expect = 5.4e-203
Identity = 352/446 (78.92%), Postives = 390/446 (87.44%), Query Frame = 0

Query: 1   ISAHVQSQLPEQSLNHFKLMVLKGLCPSSNSFNNVLGLLTKSGDLNKAWCFFNEFLGRTH 60
           I+A +QS   EQSL+ FKLMVLKG  PSS SFNNVL LL KSG+L++ W FF E+LGRT 
Sbjct: 50  INASLQSPQLEQSLDSFKLMVLKGHSPSSYSFNNVLDLLAKSGNLDRTWWFFTEYLGRTQ 109

Query: 61  FDVYSFGIMIKAFCEGGNVSKGFELLAQMERMGLSPNVVIYTILIDACCKNGDIEQAKVL 120
           FDVYSFGI IKAFCE GNVSKGFELLAQME MG+SPNV IYTILI+ACCKNGDI+QAKV+
Sbjct: 110 FDVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCKNGDIDQAKVM 169

Query: 121 FSKMGDLGLVANQYTYTVMINGLFKKGCKKDGFELYEKMNLIGVFPSVYTYNSLINEYCR 180
           FS+M DLGL A+QY YTVMING FKKG KKDGFELYEKM L+GV P++YTYNSLI EYCR
Sbjct: 170 FSRMDDLGLAADQYIYTVMINGFFKKGYKKDGFELYEKMKLMGVLPNLYTYNSLITEYCR 229

Query: 181 DGTLCLAFKLFDEMRTRGVSCNVVTYNILIGGLCRNRQVLKAERLLEQMKLAHINPSTIT 240
           DG L LAFKLFDE+  RGV+CN VTYNILIGGLCR  QVLKAE LLE+MK AHINP+T T
Sbjct: 230 DGKLSLAFKLFDEISKRGVACNAVTYNILIGGLCRKGQVLKAEGLLERMKRAHINPTTRT 289

Query: 241 FNLLMDGFCNVGKFDKALSYFDELKLIGLSPTSVTYNILIAGFSKAGNSAVVCELVREME 300
           FNLLMDG CN GK DKALSY D+LKLIG SPT VTYNILI+GFSK GNS+VV ELVREME
Sbjct: 290 FNLLMDGLCNTGKLDKALSYLDKLKLIGQSPTLVTYNILISGFSKVGNSSVVSELVREME 349

Query: 301 DRGISPSKVTYTILMDAFVRSDDVGKASQMFHLMKKVGSVPDQYTYGVLMHGLCMKGNMV 360
           DRGISPSKVTYTILMDAFVRSDD+ KA +MFHLMK++G VPDQ+TYGVL+HGLC++GNMV
Sbjct: 350 DRGISPSKVTYTILMDAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIRGNMV 409

Query: 361 EASKLYKSMIETHLQPNDVIYNTMINGYCKECNSYKALKFLQEMVRKGMTPSQASYSSTI 420
           EASKLYKSM+E HL+PNDVIYNTMINGYCKECNSYKALKFL+EMV+ G+TP+ ASY STI
Sbjct: 410 EASKLYKSMVEMHLEPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTI 469

Query: 421 EVLCKDGKSTEAKELLKEMIENGLDP 447
           +VLCKDGKS EAK LLKEM E GL P
Sbjct: 470 QVLCKDGKSIEAKRLLKEMTEAGLKP 495

BLAST of MS006488 vs. TAIR 10
Match: AT4G11690.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 520.4 bits (1339), Expect = 1.4e-147
Identity = 252/446 (56.50%), Postives = 333/446 (74.66%), Query Frame = 0

Query: 1   ISAHVQSQLPEQSLNHFKLMVLKGLCPSSNSFNNVLGLLTKSGDLNKAWCFFNEFLGRTH 60
           I+++VQSQ    S+++F  MV  G  P SN FN +L  +  S   N+ W FFNE   +  
Sbjct: 101 INSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVV 160

Query: 61  FDVYSFGIMIKAFCEGGNVSKGFELLAQMERMGLSPNVVIYTILIDACCKNGDIEQAKVL 120
            DVYSFGI+IK  CE G + K F+LL ++   G SPNVVIYT LID CCK G+IE+AK L
Sbjct: 161 LDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDL 220

Query: 121 FSKMGDLGLVANQYTYTVMINGLFKKGCKKDGFELYEKMNLIGVFPSVYTYNSLINEYCR 180
           F +MG LGLVAN+ TYTV+INGLFK G KK GFE+YEKM   GVFP++YTYN ++N+ C+
Sbjct: 221 FFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCK 280

Query: 181 DGTLCLAFKLFDEMRTRGVSCNVVTYNILIGGLCRNRQVLKAERLLEQMKLAHINPSTIT 240
           DG    AF++FDEMR RGVSCN+VTYN LIGGLCR  ++ +A ++++QMK   INP+ IT
Sbjct: 281 DGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLIT 340

Query: 241 FNLLMDGFCNVGKFDKALSYFDELKLIGLSPTSVTYNILIAGFSKAGNSAVVCELVREME 300
           +N L+DGFC VGK  KALS   +LK  GLSP+ VTYNIL++GF + G+++   ++V+EME
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEME 400

Query: 301 DRGISPSKVTYTILMDAFVRSDDVGKASQMFHLMKKVGSVPDQYTYGVLMHGLCMKGNMV 360
           +RGI PSKVTYTIL+D F RSD++ KA Q+   M+++G VPD +TY VL+HG C+KG M 
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMN 460

Query: 361 EASKLYKSMIETHLQPNDVIYNTMINGYCKECNSYKALKFLQEMVRKGMTPSQASYSSTI 420
           EAS+L+KSM+E + +PN+VIYNTMI GYCKE +SY+ALK L+EM  K + P+ ASY   I
Sbjct: 461 EASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520

Query: 421 EVLCKDGKSTEAKELLKEMIENGLDP 447
           EVLCK+ KS EA+ L+++MI++G+DP
Sbjct: 521 EVLCKERKSKEAERLVEKMIDSGIDP 546

BLAST of MS006488 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 248.1 bits (632), Expect = 1.4e-65
Identity = 147/441 (33.33%), Postives = 230/441 (52.15%), Query Frame = 0

Query: 1   ISAHVQSQLPEQSLNHFKLMVLKGLCPSSNSFNNVLGLLTKS-GDLNKAWCFFNEFL-GR 60
           + ++ +  L +++L+   L    G  P   S+N VL    +S  +++ A   F E L  +
Sbjct: 141 VKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQ 200

Query: 61  THFDVYSFGIMIKAFCEGGNVSKGFELLAQMERMGLSPNVVIYTILIDACCKNGDIEQAK 120
              +V+++ I+I+ FC  GN+     L  +ME  G  PNVV Y  LID  CK   I+   
Sbjct: 201 VSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGF 260

Query: 121 VLFSKMGDLGLVANQYTYTVMINGLFKKGCKKDGFELYEKMNLIGVFPSVYTYNSLINEY 180
            L   M   GL  N  +Y V+INGL ++G  K+   +  +MN  G      TYN+LI  Y
Sbjct: 261 KLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGY 320

Query: 181 CRDGTLCLAFKLFDEMRTRGVSCNVVTYNILIGGLCRNRQVLKAERLLEQMKLAHINPST 240
           C++G    A  +  EM   G++ +V+TY  LI  +C+   + +A   L+QM++  + P+ 
Sbjct: 321 CKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNE 380

Query: 241 ITFNLLMDGFCNVGKFDKALSYFDELKLIGLSPTSVTYNILIAGFSKAGNSAVVCELVRE 300
            T+  L+DGF   G  ++A     E+   G SP+ VTYN LI G    G       ++ +
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLED 440

Query: 301 MEDRGISPSKVTYTILMDAFVRSDDVGKASQMFHLMKKVGSVPDQYTYGVLMHGLCMKGN 360
           M+++G+SP  V+Y+ ++  F RS DV +A ++   M + G  PD  TY  L+ G C +  
Sbjct: 441 MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR 500

Query: 361 MVEASKLYKSMIETHLQPNDVIYNTMINGYCKECNSYKALKFLQEMVRKGMTPSQASYSS 420
             EA  LY+ M+   L P++  Y  +IN YC E +  KAL+   EMV KG+ P   +YS 
Sbjct: 501 TKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSV 560

Query: 421 TIEVLCKDGKSTEAKELLKEM 440
            I  L K  ++ EAK LL ++
Sbjct: 561 LINGLNKQSRTREAKRLLLKL 581

BLAST of MS006488 vs. TAIR 10
Match: AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 244.2 bits (622), Expect = 2.0e-64
Identity = 130/421 (30.88%), Postives = 222/421 (52.73%), Query Frame = 0

Query: 24  GLCPSSNSFNNVLGLLTKSGDLNKAWCFFNEFLGRTHFDVYSFGIMIKAFCEGGNVSKGF 83
           G  P   ++N ++    K+G++N A    +        DV ++  ++++ C+ G + +  
Sbjct: 167 GAVPDVITYNVMISGYCKAGEINNALSVLDRM--SVSPDVVTYNTILRSLCDSGKLKQAM 226

Query: 84  ELLAQMERMGLSPNVVIYTILIDACCKNGDIEQAKVLFSKMGDLGLVANQYTYTVMINGL 143
           E+L +M +    P+V+ YTILI+A C++  +  A  L  +M D G   +  TY V++NG+
Sbjct: 227 EVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI 286

Query: 144 FKKGCKKDGFELYEKMNLIGVFPSVYTYNSLINEYCRDGTLCLAFKLFDEMRTRGVSCNV 203
            K+G   +  +    M   G  P+V T+N ++   C  G    A KL  +M  +G S +V
Sbjct: 287 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 346

Query: 204 VTYNILIGGLCRNRQVLKAERLLEQMKLAHINPSTITFNLLMDGFCNVGKFDKALSYFDE 263
           VT+NILI  LCR   + +A  +LE+M      P+++++N L+ GFC   K D+A+ Y + 
Sbjct: 347 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 406

Query: 264 LKLIGLSPTSVTYNILIAGFSKAGNSAVVCELVREMEDRGISPSKVTYTILMDAFVRSDD 323
           +   G  P  VTYN ++    K G      E++ ++  +G SP  +TY  ++D   ++  
Sbjct: 407 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 466

Query: 324 VGKASQMFHLMKKVGSVPDQYTYGVLMHGLCMKGNMVEASKLYKSMIETHLQPNDVIYNT 383
            GKA ++   M+     PD  TY  L+ GL  +G + EA K +       ++PN V +N+
Sbjct: 467 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 526

Query: 384 MINGYCKECNSYKALKFLQEMVRKGMTPSQASYSSTIEVLCKDGKSTEAKELLKEMIENG 443
           ++ G CK   + +A+ FL  M+ +G  P++ SY+  IE L  +G + EA ELL E+   G
Sbjct: 527 IMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 585

Query: 444 L 445
           L
Sbjct: 587 L 585

BLAST of MS006488 vs. TAIR 10
Match: AT1G62670.1 (rna processing factor 2 )

HSP 1 Score: 241.9 bits (616), Expect = 9.9e-64
Identity = 128/421 (30.40%), Postives = 229/421 (54.39%), Query Frame = 0

Query: 20  MVLKGLCPSSNSFNNVLGLLTKSGDLNKAWCFFNEFLGR-THFDVYSFGIMIKAFCEGGN 79
           M + G  P++ +FN ++  L      ++A    +  + +    D+ ++G+++   C+ G+
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236

Query: 80  VSKGFELLAQMERMGLSPNVVIYTILIDACCKNGDIEQAKVLFSKMGDLGLVANQYTYTV 139
               F LL +ME+  L P V+IY  +ID  CK   ++ A  LF +M   G+  N  TY+ 
Sbjct: 237 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 296

Query: 140 MINGLFKKGCKKDGFELYEKMNLIGVFPSVYTYNSLINEYCRDGTLCLAFKLFDEMRTRG 199
           +I+ L   G   D   L   M    + P V+T+++LI+ + ++G L  A KL+DEM  R 
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356

Query: 200 VSCNVVTYNILIGGLCRNRQVLKAERLLEQMKLAHINPSTITFNLLMDGFCNVGKFDKAL 259
           +  ++VTY+ LI G C + ++ +A+++ E M   H  P  +T+N L+ GFC   + ++ +
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 416

Query: 260 SYFDELKLIGLSPTSVTYNILIAGFSKAGNSAVVCELVREMEDRGISPSKVTYTILMDAF 319
             F E+   GL   +VTYNILI G  +AG+  +  E+ +EM   G+ P+ +TY  L+D  
Sbjct: 417 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476

Query: 320 VRSDDVGKASQMFHLMKKVGSVPDQYTYGVLMHGLCMKGNMVEASKLYKSMIETHLQPND 379
            ++  + KA  +F  +++    P  YTY +++ G+C  G + +   L+ ++    ++P+ 
Sbjct: 477 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 536

Query: 380 VIYNTMINGYCKECNSYKALKFLQEMVRKGMTPSQASYSSTIEVLCKDGKSTEAKELLKE 439
           V YNTMI+G+C++ +  +A    +EM   G  P+   Y++ I    +DG    + EL+KE
Sbjct: 537 VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 596

BLAST of MS006488 vs. TAIR 10
Match: AT1G12300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 237.3 bits (604), Expect = 2.4e-62
Identity = 128/437 (29.29%), Postives = 232/437 (53.09%), Query Frame = 0

Query: 11  EQSLNHFKLMVLKGLCPSSNSFNNVLGLL--TKSGDLNKAWCFFNEFLGRTHFDVYSFGI 70
           + +++ F+ M+     P+   F+ +   +  TK  DL  A C   E  G  H ++Y+  I
Sbjct: 70  DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAH-NLYTLSI 129

Query: 71  MIKAFCEGGNVSKGFELLAQMERMGLSPNVVIYTILIDACCKNGDIEQAKVLFSKMGDLG 130
           MI  FC    +   F  + ++ ++G  PN + ++ LI+  C  G + +A  L  +M ++G
Sbjct: 130 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 189

Query: 131 LVANQYTYTVMINGLFKKGCKKDGFELYEKMNLIGVFPSVYTYNSLINEYCRDGTLCLAF 190
              +  T   ++NGL   G + +   L +KM   G  P+  TY  ++N  C+ G   LA 
Sbjct: 190 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 249

Query: 191 KLFDEMRTRGVSCNVVTYNILIGGLCRNRQVLKAERLLEQMKLAHINPSTITFNLLMDGF 250
           +L  +M  R +  + V Y+I+I GLC++  +  A  L  +M++  I  + IT+N+L+ GF
Sbjct: 250 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 309

Query: 251 CNVGKFDKALSYFDELKLIGLSPTSVTYNILIAGFSKAGNSAVVCELVREMEDRGISPSK 310
           CN G++D       ++    ++P  VT+++LI  F K G      EL +EM  RGI+P  
Sbjct: 310 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 369

Query: 311 VTYTILMDAFVRSDDVGKASQMFHLMKKVGSVPDQYTYGVLMHGLCMKGNMVEASKLYKS 370
           +TYT L+D F + + + KA+QM  LM   G  P+  T+ +L++G C    + +  +L++ 
Sbjct: 370 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 429

Query: 371 MIETHLQPNDVIYNTMINGYCKECNSYKALKFLQEMVRKGMTPSQASYSSTIEVLCKDGK 430
           M    +  + V YNT+I G+C+      A +  QEMV + + P+  +Y   ++ LC +G+
Sbjct: 430 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 489

Query: 431 STEAKELLKEMIENGLD 446
           S +A E+ +++ ++ ++
Sbjct: 490 SEKALEIFEKIEKSKME 505

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022136943.11.1e-25899.78pentatricopeptide repeat-containing protein At4g11690 [Momordica charantia][more]
XP_022971940.19.5e-21884.08pentatricopeptide repeat-containing protein At4g11690 [Cucurbita maxima][more]
XP_023511558.11.8e-21383.37pentatricopeptide repeat-containing protein At4g11690 [Cucurbita pepo subsp. pep... [more]
XP_038887006.13.5e-21282.74pentatricopeptide repeat-containing protein At4g11690 [Benincasa hispida][more]
KAG7011560.14.5e-21282.47Pentatricopeptide repeat-containing protein [Cucurbita argyrosperma subsp. argyr... [more]
Match NameE-valueIdentityDescription
Q9T0D62.0e-14656.50Pentatricopeptide repeat-containing protein At4g11690 OS=Arabidopsis thaliana OX... [more]
Q9FIX31.9e-6433.33Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... [more]
Q3EDF82.8e-6330.88Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... [more]
Q9SXD11.4e-6230.40Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop... [more]
Q9FJE63.4e-6133.10Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis th... [more]
Match NameE-valueIdentityDescription
A0A6J1C8X25.3e-25999.78pentatricopeptide repeat-containing protein At4g11690 OS=Momordica charantia OX=... [more]
A0A6J1I7484.6e-21884.08pentatricopeptide repeat-containing protein At4g11690 OS=Cucurbita maxima OX=366... [more]
A0A6J1GM092.2e-21282.47pentatricopeptide repeat-containing protein At4g11690 OS=Cucurbita moschata OX=3... [more]
A0A5D3C6B45.4e-20378.92Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3C0B25.4e-20378.92pentatricopeptide repeat-containing protein At4g11690 OS=Cucumis melo OX=3656 GN... [more]
Match NameE-valueIdentityDescription
AT4G11690.11.4e-14756.50Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT5G39710.11.4e-6533.33Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G09900.12.0e-6430.88Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT1G62670.19.9e-6430.40rna processing factor 2 [more]
AT1G12300.12.4e-6229.29Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 376..425
e-value: 3.2E-14
score: 52.8
coord: 96..145
e-value: 1.8E-16
score: 60.1
coord: 166..215
e-value: 4.9E-19
score: 68.3
coord: 271..319
e-value: 1.4E-14
score: 54.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 379..412
e-value: 6.2E-10
score: 36.6
coord: 99..132
e-value: 5.4E-8
score: 30.5
coord: 64..98
e-value: 7.1E-8
score: 30.2
coord: 204..237
e-value: 1.3E-8
score: 32.5
coord: 239..271
e-value: 6.9E-7
score: 27.0
coord: 415..446
e-value: 4.7E-5
score: 21.3
coord: 134..159
e-value: 2.8E-4
score: 18.9
coord: 309..342
e-value: 1.4E-8
score: 32.4
coord: 169..203
e-value: 3.0E-6
score: 25.0
coord: 274..307
e-value: 2.5E-8
score: 31.6
coord: 344..377
e-value: 1.8E-7
score: 28.9
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 62..90
e-value: 2.3E-5
score: 24.0
coord: 338..369
e-value: 4.3E-7
score: 29.5
coord: 234..264
e-value: 6.1E-7
score: 29.1
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 31..56
e-value: 1.2
score: 9.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 167..201
score: 11.936913
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 62..96
score: 12.068449
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 237..271
score: 12.046526
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 272..306
score: 11.794416
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 97..131
score: 11.761533
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 412..446
score: 11.531345
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 202..236
score: 12.024604
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 342..376
score: 11.432693
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 377..411
score: 12.594591
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 132..166
score: 10.511944
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 307..341
score: 10.698286
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 371..442
e-value: 8.1E-19
score: 69.9
coord: 300..370
e-value: 5.6E-21
score: 76.9
coord: 160..231
e-value: 2.6E-22
score: 81.3
coord: 232..299
e-value: 3.1E-19
score: 71.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..159
e-value: 7.7E-37
score: 129.3
NoneNo IPR availablePANTHERPTHR47942TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 1..446
NoneNo IPR availablePANTHERPTHR47942:SF34PPR CONTAINING PLANT-LIKE PROTEINcoord: 1..446
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 108..279
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 318..443

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS006488.1MS006488.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding