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MS006442 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GCTAAAGAATTGGAGCAACCGCTAAGCAAAAGGAATGTTCTTCTTGCCAAAGAAGAAGAGTATTCAAAGAAAACTGGAGAACTGGGTGTACTGTCATCTGATGCTTTTGAAACG GCTAAAGAATTGGAGCAACCGCTAAGCAAAAGGAATGTTCTTCTTGCCAAAGAAGAAGAGTATTCAAAGAAAACTGGAGAACTGGGTGTACTGTCATCTGATGCTTTTGAAACG GCTAAAGAATTGGAGCAACCGCTAAGCAAAAGGAATGTTCTTCTTGCCAAAGAAGAAGAGTATTCAAAGAAAACTGGAGAACTGGGTGTACTGTCATCTGATGCTTTTGAAACG AKELEQPLSKRNVLLAKEEEYSKKTGELGVLSSDAFET Homology
BLAST of MS006442 vs. NCBI nr
Match: KAG7010223.1 (Structural maintenance of chromosomes protein 3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 65.5 bits (158), Expect = 1.2e-07 Identity = 35/38 (92.11%), Postives = 36/38 (94.74%), Query Frame = 0
BLAST of MS006442 vs. NCBI nr
Match: XP_022985698.1 (structural maintenance of chromosomes protein 3 [Cucurbita maxima] >XP_022985699.1 structural maintenance of chromosomes protein 3 [Cucurbita maxima] >XP_022985700.1 structural maintenance of chromosomes protein 3 [Cucurbita maxima] >XP_022985701.1 structural maintenance of chromosomes protein 3 [Cucurbita maxima]) HSP 1 Score: 65.5 bits (158), Expect = 1.2e-07 Identity = 35/38 (92.11%), Postives = 36/38 (94.74%), Query Frame = 0
BLAST of MS006442 vs. NCBI nr
Match: XP_022943912.1 (structural maintenance of chromosomes protein 3 [Cucurbita moschata] >XP_022943914.1 structural maintenance of chromosomes protein 3 [Cucurbita moschata] >XP_022943915.1 structural maintenance of chromosomes protein 3 [Cucurbita moschata] >XP_022943916.1 structural maintenance of chromosomes protein 3 [Cucurbita moschata]) HSP 1 Score: 65.5 bits (158), Expect = 1.2e-07 Identity = 35/38 (92.11%), Postives = 36/38 (94.74%), Query Frame = 0
BLAST of MS006442 vs. NCBI nr
Match: XP_023512427.1 (structural maintenance of chromosomes protein 3 [Cucurbita pepo subsp. pepo] >XP_023512428.1 structural maintenance of chromosomes protein 3 [Cucurbita pepo subsp. pepo] >XP_023512429.1 structural maintenance of chromosomes protein 3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 65.5 bits (158), Expect = 1.2e-07 Identity = 35/38 (92.11%), Postives = 36/38 (94.74%), Query Frame = 0
BLAST of MS006442 vs. NCBI nr
Match: KAG6570330.1 (Structural maintenance of chromosomes protein 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 65.5 bits (158), Expect = 1.2e-07 Identity = 35/38 (92.11%), Postives = 36/38 (94.74%), Query Frame = 0
BLAST of MS006442 vs. ExPASy Swiss-Prot
Match: Q56YN8 (Structural maintenance of chromosomes protein 3 OS=Arabidopsis thaliana OX=3702 GN=SMC3 PE=2 SV=1) HSP 1 Score: 43.9 bits (102), Expect = 4.7e-04 Identity = 23/37 (62.16%), Postives = 29/37 (78.38%), Query Frame = 0
BLAST of MS006442 vs. ExPASy TrEMBL
Match: A0A6J1JE08 (Structural maintenance of chromosomes protein OS=Cucurbita maxima OX=3661 GN=LOC111483677 PE=3 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 5.6e-08 Identity = 35/38 (92.11%), Postives = 36/38 (94.74%), Query Frame = 0
BLAST of MS006442 vs. ExPASy TrEMBL
Match: A0A6J1FUC2 (Structural maintenance of chromosomes protein OS=Cucurbita moschata OX=3662 GN=LOC111448494 PE=3 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 5.6e-08 Identity = 35/38 (92.11%), Postives = 36/38 (94.74%), Query Frame = 0
BLAST of MS006442 vs. ExPASy TrEMBL
Match: A0A6J1DIL6 (Structural maintenance of chromosomes protein OS=Momordica charantia OX=3673 GN=LOC111021257 PE=3 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.6e-07 Identity = 34/37 (91.89%), Postives = 35/37 (94.59%), Query Frame = 0
BLAST of MS006442 vs. ExPASy TrEMBL
Match: A0A5B7AZT0 (Putative structural maintenance of chromosomes protein 3 (Fragment) OS=Davidia involucrata OX=16924 GN=Din_031687 PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 3.1e-06 Identity = 32/38 (84.21%), Postives = 34/38 (89.47%), Query Frame = 0
BLAST of MS006442 vs. ExPASy TrEMBL
Match: A0A5B7B119 (Structural maintenance of chromosomes protein OS=Davidia involucrata OX=16924 GN=Din_031686 PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 3.1e-06 Identity = 32/38 (84.21%), Postives = 34/38 (89.47%), Query Frame = 0
BLAST of MS006442 vs. TAIR 10
Match: AT2G27170.1 (Structural maintenance of chromosomes (SMC) family protein ) HSP 1 Score: 43.9 bits (102), Expect = 3.4e-05 Identity = 23/37 (62.16%), Postives = 29/37 (78.38%), Query Frame = 0
BLAST of MS006442 vs. TAIR 10
Match: AT2G27170.2 (Structural maintenance of chromosomes (SMC) family protein ) HSP 1 Score: 43.9 bits (102), Expect = 3.4e-05 Identity = 23/37 (62.16%), Postives = 29/37 (78.38%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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