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MS006434 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTTTATTTTGTTTGTGTTACAGGATGGATGGTGGTGCAGACGGAAGCATTGACTTGCTACAGAGAGAGCACAACGTTTAAGGGAAAGTGTAATTTGGCTGATGATTGTGCTAGAGTTTGCTATCAAAATGAGTCGTGGGATGGCGGATTTTGCTCTGGCGATAAATGCATTTGTACCCAGCGTTGT TTTTATTTTGTTTGTGTTACAGGATGGATGGTGGTGCAGACGGAAGCATTGACTTGCTACAGAGAGAGCACAACGTTTAAGGGAAAGTGTAATTTGGCTGATGATTGTGCTAGAGTTTGCTATCAAAATGAGTCGTGGGATGGCGGATTTTGCTCTGGCGATAAATGCATTTGTACCCAGCGTTGT TTTTATTTTGTTTGTGTTACAGGATGGATGGTGGTGCAGACGGAAGCATTGACTTGCTACAGAGAGAGCACAACGTTTAAGGGAAAGTGTAATTTGGCTGATGATTGTGCTAGAGTTTGCTATCAAAATGAGTCGTGGGATGGCGGATTTTGCTCTGGCGATAAATGCATTTGTACCCAGCGTTGT FYFVCVTGWMVVQTEALTCYRESTTFKGKCNLADDCARVCYQNESWDGGFCSGDKCICTQRC Homology
BLAST of MS006434 vs. NCBI nr
Match: KAA0062792.1 (defensin-like protein 3 [Cucumis melo var. makuwa] >TYJ96761.1 defensin-like protein 3 [Cucumis melo var. makuwa]) HSP 1 Score: 99.8 bits (247), Expect = 9.0e-18 Identity = 39/61 (63.93%), Postives = 48/61 (78.69%), Query Frame = 0
BLAST of MS006434 vs. NCBI nr
Match: KAE8646110.1 (hypothetical protein Csa_016182 [Cucumis sativus]) HSP 1 Score: 94.0 bits (232), Expect = 5.0e-16 Identity = 37/61 (60.66%), Postives = 45/61 (73.77%), Query Frame = 0
BLAST of MS006434 vs. NCBI nr
Match: XP_022975676.1 (defensin-like protein 5 [Cucurbita maxima]) HSP 1 Score: 80.1 bits (196), Expect = 7.4e-12 Identity = 37/63 (58.73%), Postives = 43/63 (68.25%), Query Frame = 0
BLAST of MS006434 vs. NCBI nr
Match: XP_022974693.1 (defensin-like protein 5 [Cucurbita maxima]) HSP 1 Score: 79.0 bits (193), Expect = 1.6e-11 Identity = 36/63 (57.14%), Postives = 43/63 (68.25%), Query Frame = 0
BLAST of MS006434 vs. NCBI nr
Match: XP_022968860.1 (defensin-like protein 5 [Cucurbita maxima] >XP_022974469.1 defensin-like protein 5 [Cucurbita maxima] >XP_022974470.1 defensin-like protein 5 [Cucurbita maxima] >XP_022974471.1 defensin-like protein 5 [Cucurbita maxima] >XP_022974694.1 defensin-like protein 5 [Cucurbita maxima] >XP_022974695.1 defensin-like protein 5 [Cucurbita maxima] >XP_022974696.1 defensin-like protein 5 [Cucurbita maxima] >XP_022974697.1 defensin-like protein 5 [Cucurbita maxima] >XP_022974698.1 defensin-like protein 5 [Cucurbita maxima] >XP_022975267.1 defensin-like protein 5 [Cucurbita maxima] >XP_022975269.1 defensin-like protein 5 [Cucurbita maxima]) HSP 1 Score: 79.0 bits (193), Expect = 1.6e-11 Identity = 36/63 (57.14%), Postives = 43/63 (68.25%), Query Frame = 0
BLAST of MS006434 vs. ExPASy TrEMBL
Match: A0A5A7V3H5 (Defensin-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold986G00550 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 4.4e-18 Identity = 39/61 (63.93%), Postives = 48/61 (78.69%), Query Frame = 0
BLAST of MS006434 vs. ExPASy TrEMBL
Match: A0A6J1IEV4 (defensin-like protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111475548 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 3.6e-12 Identity = 37/63 (58.73%), Postives = 43/63 (68.25%), Query Frame = 0
BLAST of MS006434 vs. ExPASy TrEMBL
Match: A0A6J1IBG0 (defensin-like protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111473130 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 8.0e-12 Identity = 36/63 (57.14%), Postives = 43/63 (68.25%), Query Frame = 0
BLAST of MS006434 vs. ExPASy TrEMBL
Match: A0A6J1IAB8 (defensin-like protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111473131 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 8.0e-12 Identity = 36/63 (57.14%), Postives = 43/63 (68.25%), Query Frame = 0
BLAST of MS006434 vs. ExPASy TrEMBL
Match: A0A6J1HW18 (defensin-like protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111467994 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 8.0e-12 Identity = 36/63 (57.14%), Postives = 43/63 (68.25%), Query Frame = 0
BLAST of MS006434 vs. TAIR 10
Match: AT2G02147.1 (low-molecular-weight cysteine-rich 73 ) HSP 1 Score: 43.1 bits (100), Expect = 9.3e-05 Identity = 22/65 (33.85%), Postives = 32/65 (49.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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