MS006423 (gene) Bitter gourd (TR) v1

Overview
NameMS006423
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionFilamentous hemagglutinin transporter
Locationscaffold327: 535358 .. 536638 (-)
RNA-Seq ExpressionMS006423
SyntenyMS006423
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCCGAAGTCAGTAGTCTAGTACGGGTACTCGCCGGCTACAAGGACGAAGATAATCGGACGACGCTGGGGAATGGCCAGGATCAATCAACGGCTCTCGTTACCCGCGACTTGCTCGGACAATCTTCCAAGCTCGCCGAGACTCAGGAATTGGACCTCGATTTGCAGGTTCCCACCGGCTGGGAAAAGAGACTCGACTTGAAGGTCCCTTCATCTTCTTCTCCGCTTCAATTTTTATCTGCAACCCTTTTTCTTTTTTAATTTTTTTGTTTCGAAATCTGAAGAACATGTTGATTTGATTTGATTTGATTTTGTAAACCCTCCATTCTTCAGGCTTCAGCTGTTCTTTTTCTTTTTTCTTTTTTCTTTTTTTTTTTCTGGGGAAACAAAAAAGAAAAAACCATTTTGTTGGTTACTGTAATTCATTTCATTCAAGAATTGTTTATAATTGCCTTCAGAAATTCAGCTATTTTTCCGATGGAAAAAGGGGGAAAAAACATTTTGTACTTGTGGGTATGGTTTTTATCTTTTATTTGAATTCTCTGCAAAGACTGTAACTTCCTTTCCTTTAATGACATTAATTGCGGCGCTTGGCCTTTAAAATTCTTGGTACTCCTGATTAATTATCATCGCATCGTCCCACCATCTCCTCTGAAATCATTAATTTCCGTATGAATTGAAGAAAAGTGAAAACAGGCGTGTGATTTAATCGTCGATTTTACTCAATTTCCTGTGTTTTGGTTTTTGCAGTCGGGGAAAGTTTACATACAGAGAAGTAAAACTCCGGATTCTCCGGTGAGTTCGGATTCGAAGCAACGGCAACACCAAATGATTAATCAGACAGAATCGAAGTTTCAGGATTTGAACTTCCCACCGTCTCCTTCGAAACGAACGTTAAATCTGTTCAGCGAAACGAGCTTGGATTTGAAATTGCCGTCGTCGTCCACCAATTACGCAAGCGTGTGCACTCTGGATAAGGTGAAATCGGCGCTGGAGAGGGCGGACAAGGAGCTGGTAAAGAAACGCTCTTCGCTCTGGAAGTCGTCGTCGCCGTCGTACTCTTCGTCGTCTTCGTCGGCGGCGGCGGCGGCGGGGAAAGAAATTCAGGAAGAAGAAGCGGCGGAAGTCAGGAACTGGACGACGCCGATTGCGGTGGGTTGCCCGGGATGTTTATCTTATGTATTGGTAATGAAAAACAATCCGAGGTGTCCTCGTTGCAACTCTGTTGTTCCATTGCCCAGTATGAAGAAACCTCGGATTGATCTAAACATGTCCATA

mRNA sequence

ATGGCTGCCGAAGTCAGTAGTCTAGTACGGGTACTCGCCGGCTACAAGGACGAAGATAATCGGACGACGCTGGGGAATGGCCAGGATCAATCAACGGCTCTCGTTACCCGCGACTTGCTCGGACAATCTTCCAAGCTCGCCGAGACTCAGGAATTGGACCTCGATTTGCAGGTTCCCACCGGCTGGGAAAAGAGACTCGACTTGAAGTCGGGGAAAGTTTACATACAGAGAAGTAAAACTCCGGATTCTCCGGTGAGTTCGGATTCGAAGCAACGGCAACACCAAATGATTAATCAGACAGAATCGAAGTTTCAGGATTTGAACTTCCCACCGTCTCCTTCGAAACGAACGTTAAATCTGTTCAGCGAAACGAGCTTGGATTTGAAATTGCCGTCGTCGTCCACCAATTACGCAAGCGTGTGCACTCTGGATAAGGTGAAATCGGCGCTGGAGAGGGCGGACAAGGAGCTGGTAAAGAAACGCTCTTCGCTCTGGAAGTCGTCGTCGCCGTCGTACTCTTCGTCGTCTTCGTCGGCGGCGGCGGCGGCGGGGAAAGAAATTCAGGAAGAAGAAGCGGCGGAAGTCAGGAACTGGACGACGCCGATTGCGGTGGGTTGCCCGGGATGTTTATCTTATGTATTGGTAATGAAAAACAATCCGAGGTGTCCTCGTTGCAACTCTGTTGTTCCATTGCCCAGTATGAAGAAACCTCGGATTGATCTAAACATGTCCATA

Coding sequence (CDS)

ATGGCTGCCGAAGTCAGTAGTCTAGTACGGGTACTCGCCGGCTACAAGGACGAAGATAATCGGACGACGCTGGGGAATGGCCAGGATCAATCAACGGCTCTCGTTACCCGCGACTTGCTCGGACAATCTTCCAAGCTCGCCGAGACTCAGGAATTGGACCTCGATTTGCAGGTTCCCACCGGCTGGGAAAAGAGACTCGACTTGAAGTCGGGGAAAGTTTACATACAGAGAAGTAAAACTCCGGATTCTCCGGTGAGTTCGGATTCGAAGCAACGGCAACACCAAATGATTAATCAGACAGAATCGAAGTTTCAGGATTTGAACTTCCCACCGTCTCCTTCGAAACGAACGTTAAATCTGTTCAGCGAAACGAGCTTGGATTTGAAATTGCCGTCGTCGTCCACCAATTACGCAAGCGTGTGCACTCTGGATAAGGTGAAATCGGCGCTGGAGAGGGCGGACAAGGAGCTGGTAAAGAAACGCTCTTCGCTCTGGAAGTCGTCGTCGCCGTCGTACTCTTCGTCGTCTTCGTCGGCGGCGGCGGCGGCGGGGAAAGAAATTCAGGAAGAAGAAGCGGCGGAAGTCAGGAACTGGACGACGCCGATTGCGGTGGGTTGCCCGGGATGTTTATCTTATGTATTGGTAATGAAAAACAATCCGAGGTGTCCTCGTTGCAACTCTGTTGTTCCATTGCCCAGTATGAAGAAACCTCGGATTGATCTAAACATGTCCATA

Protein sequence

MAAEVSSLVRVLAGYKDEDNRTTLGNGQDQSTALVTRDLLGQSSKLAETQELDLDLQVPTGWEKRLDLKSGKVYIQRSKTPDSPVSSDSKQRQHQMINQTESKFQDLNFPPSPSKRTLNLFSETSLDLKLPSSSTNYASVCTLDKVKSALERADKELVKKRSSLWKSSSPSYSSSSSSAAAAAGKEIQEEEAAEVRNWTTPIAVGCPGCLSYVLVMKNNPRCPRCNSVVPLPSMKKPRIDLNMSI
Homology
BLAST of MS006423 vs. NCBI nr
Match: XP_004139833.1 (uncharacterized protein LOC101214550 [Cucumis sativus] >KGN44280.1 hypothetical protein Csa_016628 [Cucumis sativus])

HSP 1 Score: 400.2 bits (1027), Expect = 1.3e-107
Identity = 220/248 (88.71%), Postives = 232/248 (93.55%), Query Frame = 0

Query: 1   MAAEVSSLVRVLAGYKDEDNRTTLGNGQDQSTALVTRDLLGQSSKLAETQELDLDLQVPT 60
           MAAEVSSL+RVLAGYKD+DNRT LGNGQD STALVTRDLLGQSS L ++QELDLDLQVPT
Sbjct: 1   MAAEVSSLIRVLAGYKDDDNRTALGNGQD-STALVTRDLLGQSSNLTDSQELDLDLQVPT 60

Query: 61  GWEKRLDLKSGKVYIQRSKTPDSPVSSDSKQRQHQMINQTESKFQDLNFPPSPSKRTLNL 120
           GWEKRLDLKSGKVYIQRS+TPDSP++SDSK  Q QMINQTESKFQDLNFPPSPSKRTLNL
Sbjct: 61  GWEKRLDLKSGKVYIQRSQTPDSPLNSDSK--QIQMINQTESKFQDLNFPPSPSKRTLNL 120

Query: 121 FSETSLDLKLPS--SSTNYASVCTLDKVKSALERADKELVKKRSSLWKS-SSPSYSSSSS 180
           F+ETSLDLKL S  SSTNYASVCTLDKVKSALERADKELVKKRSSLWKS SSPSYSSSSS
Sbjct: 121 FNETSLDLKLTSSPSSTNYASVCTLDKVKSALERADKELVKKRSSLWKSASSPSYSSSSS 180

Query: 181 SAAAAAGKEIQEEEAAEVRNWTTPIAVGCPGCLSYVLVMKNNPRCPRCNSVVPLPSMKKP 240
           S  AAAGKEIQEEEAAE+RN   P+AVGCPGCLSYVLVMKNNPRCPRCNSVVPLP++KKP
Sbjct: 181 S--AAAGKEIQEEEAAEIRNSAAPMAVGCPGCLSYVLVMKNNPRCPRCNSVVPLPTIKKP 240

Query: 241 RIDLNMSI 246
           RIDLNMSI
Sbjct: 241 RIDLNMSI 243

BLAST of MS006423 vs. NCBI nr
Match: XP_008447115.1 (PREDICTED: uncharacterized protein LOC103489640 [Cucumis melo])

HSP 1 Score: 397.1 bits (1019), Expect = 1.1e-106
Identity = 218/249 (87.55%), Postives = 231/249 (92.77%), Query Frame = 0

Query: 1   MAAEVSSLVRVLAGYKDEDNRTTLGNGQDQSTALVTRDLLGQSSKLAETQELDLDLQVPT 60
           MAAEVSSL+RVLAGYK++DNRT LGNGQD STALVTRDLLGQSS L ++QELDLDLQVPT
Sbjct: 1   MAAEVSSLIRVLAGYKEDDNRTALGNGQD-STALVTRDLLGQSSNLTDSQELDLDLQVPT 60

Query: 61  GWEKRLDLKSGKVYIQRSKTPDSPVSSDSKQRQHQMINQTESKFQDLNFPPSPSKRTLNL 120
           GWEKRLDLKSGKVYIQRS+TPDSP++SDSK  Q QMINQTESKFQDLNFPPSPSKRTLNL
Sbjct: 61  GWEKRLDLKSGKVYIQRSQTPDSPLNSDSK--QIQMINQTESKFQDLNFPPSPSKRTLNL 120

Query: 121 FSETSLDLKL---PSSSTNYASVCTLDKVKSALERADKELVKKRSSLWKS-SSPSYSSSS 180
           F+ETSLDLKL   PS STNYASVCTLDKVKSALERADKELVKKRSSLWKS SSPSYSSSS
Sbjct: 121 FNETSLDLKLTSSPSPSTNYASVCTLDKVKSALERADKELVKKRSSLWKSASSPSYSSSS 180

Query: 181 SSAAAAAGKEIQEEEAAEVRNWTTPIAVGCPGCLSYVLVMKNNPRCPRCNSVVPLPSMKK 240
           SSAAA   KEIQEEEAAE+RN   P+AVGCPGCLSYVLVMKNNPRCPRCNSVVPLP++KK
Sbjct: 181 SSAAA---KEIQEEEAAEIRNSAAPMAVGCPGCLSYVLVMKNNPRCPRCNSVVPLPTIKK 240

Query: 241 PRIDLNMSI 246
           PRIDLNMSI
Sbjct: 241 PRIDLNMSI 243

BLAST of MS006423 vs. NCBI nr
Match: XP_022969452.1 (uncharacterized protein LOC111468450 [Cucurbita maxima])

HSP 1 Score: 363.2 bits (931), Expect = 1.7e-96
Identity = 211/257 (82.10%), Postives = 222/257 (86.38%), Query Frame = 0

Query: 1   MAAEVSSLVRVL--AGYKDEDNRTTLGNGQDQSTALVTRDLLGQSSKLAETQELDLDLQV 60
           MAA+VSSL+RVL  AGY DEDNRT LGNGQ + T LVTRDLLGQSS LA +QELDLDLQV
Sbjct: 1   MAAQVSSLIRVLAGAGYNDEDNRTPLGNGQ-EPTPLVTRDLLGQSSNLAASQELDLDLQV 60

Query: 61  PTGWEKRLDLKSGKVYIQRSKTPDSPVSSDSKQRQHQMINQTESKFQDLNFPPSPSKRTL 120
           P+GWEKRLDLKSGKVYIQRS+TPDSP++SDSK  QHQM NQTESKFQDLNFPPSPSKRTL
Sbjct: 61  PSGWEKRLDLKSGKVYIQRSQTPDSPLNSDSK--QHQMTNQTESKFQDLNFPPSPSKRTL 120

Query: 121 NLFSETSLDLKL-------PSSSTNYASVCTLDKVKSALERADKELVKKRSSLWKS-SSP 180
           NLF+ETSLDLKL       PS STNYASVCTLDKVKSALERADKELVKKRSSLWKS SSP
Sbjct: 121 NLFNETSLDLKLTSSSPSSPSPSTNYASVCTLDKVKSALERADKELVKKRSSLWKSTSSP 180

Query: 181 SYSSSSSSAAAAAGKEIQ-EEEAAEVRN-WTTPIAVGCPGCLSYVLVMKNNPRCPRCNSV 240
           SYSSSSS+AA    KEIQ EEEA E RN    P+AVGC GCLSYVLV KNNPRCPRCNSV
Sbjct: 181 SYSSSSSAAA----KEIQEEEEAVENRNEAAAPMAVGCRGCLSYVLVTKNNPRCPRCNSV 240

Query: 241 VPLPSMKKPRIDLNMSI 246
           VPL SMKKPRIDLNMSI
Sbjct: 241 VPLASMKKPRIDLNMSI 250

BLAST of MS006423 vs. NCBI nr
Match: XP_022952111.1 (uncharacterized protein LOC111454876 [Cucurbita moschata])

HSP 1 Score: 358.2 bits (918), Expect = 5.6e-95
Identity = 209/263 (79.47%), Postives = 221/263 (84.03%), Query Frame = 0

Query: 1   MAAEVSSLVRVLA-----GYKDEDNRTTLGNGQDQSTALVTRDLLGQSSKLAETQELDLD 60
           MAA+VS+L+RVLA     GY DEDNRT LGNGQ + T LVTRDLLGQSS LA +QELDLD
Sbjct: 1   MAAQVSTLIRVLAGGGGGGYNDEDNRTPLGNGQ-EPTPLVTRDLLGQSSNLAASQELDLD 60

Query: 61  LQVPTGWEKRLDLKSGKVYIQRSKTPDSPVSSDSKQRQHQMINQTESKFQDLNFPPSPSK 120
           LQVP+GWEKRLDLKSGKVYIQRS+TPDSP++SDSK   HQM NQTESKFQDLNFPPSPSK
Sbjct: 61  LQVPSGWEKRLDLKSGKVYIQRSQTPDSPLNSDSK--HHQMTNQTESKFQDLNFPPSPSK 120

Query: 121 RTLNLFSETSLDLKL-------PSSSTNYASVCTLDKVKSALERADKELVKKRSSLWKS- 180
           RTLNLF+ETSLDLKL       PS STNYASVCTLDKVKSALERADKELVKKRSSLWKS 
Sbjct: 121 RTLNLFNETSLDLKLTSSPSPSPSPSTNYASVCTLDKVKSALERADKELVKKRSSLWKST 180

Query: 181 SSPSYSSSSSSAAAAAGKEIQ-EEEAAEVRN----WTTPIAVGCPGCLSYVLVMKNNPRC 240
           SSPSYSSSSS+AA    KEIQ EEEA E RN       P+AVGC GCLSYVLV KNNPRC
Sbjct: 181 SSPSYSSSSSAAA----KEIQEEEEAVENRNEAAVLAAPMAVGCRGCLSYVLVTKNNPRC 240

Query: 241 PRCNSVVPLPSMKKPRIDLNMSI 246
           PRCNSVVPL SMKKPRIDLNMSI
Sbjct: 241 PRCNSVVPLASMKKPRIDLNMSI 256

BLAST of MS006423 vs. NCBI nr
Match: XP_023553772.1 (uncharacterized protein DDB_G0280205 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 357.8 bits (917), Expect = 7.3e-95
Identity = 210/261 (80.46%), Postives = 221/261 (84.67%), Query Frame = 0

Query: 1   MAAEVSSLVRVLA------GYKDEDNRTTLGNGQDQSTALVTRDLLGQSSKLAETQELDL 60
           MAA+VS+L+RVLA      GY DEDNRT LGNGQ + T LVTRDLLGQSS LA +QELDL
Sbjct: 1   MAAQVSTLIRVLAGGGGGGGYNDEDNRTPLGNGQ-EPTPLVTRDLLGQSSNLAASQELDL 60

Query: 61  DLQVPTGWEKRLDLKSGKVYIQRSKTPDSPVSSDSKQRQHQMINQTESKFQDLNFPPSPS 120
           DLQVP+GWEKRLDLKSGKVYIQRS+TPDSP++SDSK   HQM NQTESKFQDLNFPPSPS
Sbjct: 61  DLQVPSGWEKRLDLKSGKVYIQRSQTPDSPLNSDSK--HHQMTNQTESKFQDLNFPPSPS 120

Query: 121 KRTLNLFSETSLDLKL-------PSSSTNYASVCTLDKVKSALERADKELVKKRSSLWKS 180
           KRTLNLF+ETSLDLKL       PS STNYASVCTLDKVKSALERADKELVKKRSSLWKS
Sbjct: 121 KRTLNLFNETSLDLKLTSSPSPSPSPSTNYASVCTLDKVKSALERADKELVKKRSSLWKS 180

Query: 181 -SSPSYSSSSSSAAAAAGKEIQ-EEEAAEVRNWT-TPIAVGCPGCLSYVLVMKNNPRCPR 240
            SSPS  SSSSSAAA   KEIQ EEEA E RN T  P+AVGC GCLSYVLV KNNPRCPR
Sbjct: 181 TSSPSSYSSSSSAAA---KEIQEEEEAVENRNETAAPMAVGCRGCLSYVLVTKNNPRCPR 240

Query: 241 CNSVVPLPSMKKPRIDLNMSI 246
           CNSVVPL SMKKPRIDLNMSI
Sbjct: 241 CNSVVPLASMKKPRIDLNMSI 255

BLAST of MS006423 vs. ExPASy Swiss-Prot
Match: Q9SRN4 (Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 8.0e-04
Identity = 23/68 (33.82%), Postives = 42/68 (61.76%), Query Frame = 0

Query: 169 SPSYSSSSSSAAAAAGKEIQEEEAAEVRNWTTPIAVGCPGCLSYVLVMKNNPRCPRCNSV 228
           SP+ S+++S ++  + +  QEE        T+ + VGCP CL YV++  ++P+CP+C S 
Sbjct: 32  SPNRSNTTSPSSCVSSETNQEEN----ETITSMVLVGCPRCLMYVMLSDDDPKCPKCKST 91

Query: 229 VPLPSMKK 237
           V L  +++
Sbjct: 92  VLLDFLQE 95

BLAST of MS006423 vs. ExPASy TrEMBL
Match: A0A0A0K3J9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G238440 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 6.2e-108
Identity = 220/248 (88.71%), Postives = 232/248 (93.55%), Query Frame = 0

Query: 1   MAAEVSSLVRVLAGYKDEDNRTTLGNGQDQSTALVTRDLLGQSSKLAETQELDLDLQVPT 60
           MAAEVSSL+RVLAGYKD+DNRT LGNGQD STALVTRDLLGQSS L ++QELDLDLQVPT
Sbjct: 1   MAAEVSSLIRVLAGYKDDDNRTALGNGQD-STALVTRDLLGQSSNLTDSQELDLDLQVPT 60

Query: 61  GWEKRLDLKSGKVYIQRSKTPDSPVSSDSKQRQHQMINQTESKFQDLNFPPSPSKRTLNL 120
           GWEKRLDLKSGKVYIQRS+TPDSP++SDSK  Q QMINQTESKFQDLNFPPSPSKRTLNL
Sbjct: 61  GWEKRLDLKSGKVYIQRSQTPDSPLNSDSK--QIQMINQTESKFQDLNFPPSPSKRTLNL 120

Query: 121 FSETSLDLKLPS--SSTNYASVCTLDKVKSALERADKELVKKRSSLWKS-SSPSYSSSSS 180
           F+ETSLDLKL S  SSTNYASVCTLDKVKSALERADKELVKKRSSLWKS SSPSYSSSSS
Sbjct: 121 FNETSLDLKLTSSPSSTNYASVCTLDKVKSALERADKELVKKRSSLWKSASSPSYSSSSS 180

Query: 181 SAAAAAGKEIQEEEAAEVRNWTTPIAVGCPGCLSYVLVMKNNPRCPRCNSVVPLPSMKKP 240
           S  AAAGKEIQEEEAAE+RN   P+AVGCPGCLSYVLVMKNNPRCPRCNSVVPLP++KKP
Sbjct: 181 S--AAAGKEIQEEEAAEIRNSAAPMAVGCPGCLSYVLVMKNNPRCPRCNSVVPLPTIKKP 240

Query: 241 RIDLNMSI 246
           RIDLNMSI
Sbjct: 241 RIDLNMSI 243

BLAST of MS006423 vs. ExPASy TrEMBL
Match: A0A1S3BGM6 (uncharacterized protein LOC103489640 OS=Cucumis melo OX=3656 GN=LOC103489640 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 5.2e-107
Identity = 218/249 (87.55%), Postives = 231/249 (92.77%), Query Frame = 0

Query: 1   MAAEVSSLVRVLAGYKDEDNRTTLGNGQDQSTALVTRDLLGQSSKLAETQELDLDLQVPT 60
           MAAEVSSL+RVLAGYK++DNRT LGNGQD STALVTRDLLGQSS L ++QELDLDLQVPT
Sbjct: 1   MAAEVSSLIRVLAGYKEDDNRTALGNGQD-STALVTRDLLGQSSNLTDSQELDLDLQVPT 60

Query: 61  GWEKRLDLKSGKVYIQRSKTPDSPVSSDSKQRQHQMINQTESKFQDLNFPPSPSKRTLNL 120
           GWEKRLDLKSGKVYIQRS+TPDSP++SDSK  Q QMINQTESKFQDLNFPPSPSKRTLNL
Sbjct: 61  GWEKRLDLKSGKVYIQRSQTPDSPLNSDSK--QIQMINQTESKFQDLNFPPSPSKRTLNL 120

Query: 121 FSETSLDLKL---PSSSTNYASVCTLDKVKSALERADKELVKKRSSLWKS-SSPSYSSSS 180
           F+ETSLDLKL   PS STNYASVCTLDKVKSALERADKELVKKRSSLWKS SSPSYSSSS
Sbjct: 121 FNETSLDLKLTSSPSPSTNYASVCTLDKVKSALERADKELVKKRSSLWKSASSPSYSSSS 180

Query: 181 SSAAAAAGKEIQEEEAAEVRNWTTPIAVGCPGCLSYVLVMKNNPRCPRCNSVVPLPSMKK 240
           SSAAA   KEIQEEEAAE+RN   P+AVGCPGCLSYVLVMKNNPRCPRCNSVVPLP++KK
Sbjct: 181 SSAAA---KEIQEEEAAEIRNSAAPMAVGCPGCLSYVLVMKNNPRCPRCNSVVPLPTIKK 240

Query: 241 PRIDLNMSI 246
           PRIDLNMSI
Sbjct: 241 PRIDLNMSI 243

BLAST of MS006423 vs. ExPASy TrEMBL
Match: A0A6J1HWE1 (uncharacterized protein LOC111468450 OS=Cucurbita maxima OX=3661 GN=LOC111468450 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 8.4e-97
Identity = 211/257 (82.10%), Postives = 222/257 (86.38%), Query Frame = 0

Query: 1   MAAEVSSLVRVL--AGYKDEDNRTTLGNGQDQSTALVTRDLLGQSSKLAETQELDLDLQV 60
           MAA+VSSL+RVL  AGY DEDNRT LGNGQ + T LVTRDLLGQSS LA +QELDLDLQV
Sbjct: 1   MAAQVSSLIRVLAGAGYNDEDNRTPLGNGQ-EPTPLVTRDLLGQSSNLAASQELDLDLQV 60

Query: 61  PTGWEKRLDLKSGKVYIQRSKTPDSPVSSDSKQRQHQMINQTESKFQDLNFPPSPSKRTL 120
           P+GWEKRLDLKSGKVYIQRS+TPDSP++SDSK  QHQM NQTESKFQDLNFPPSPSKRTL
Sbjct: 61  PSGWEKRLDLKSGKVYIQRSQTPDSPLNSDSK--QHQMTNQTESKFQDLNFPPSPSKRTL 120

Query: 121 NLFSETSLDLKL-------PSSSTNYASVCTLDKVKSALERADKELVKKRSSLWKS-SSP 180
           NLF+ETSLDLKL       PS STNYASVCTLDKVKSALERADKELVKKRSSLWKS SSP
Sbjct: 121 NLFNETSLDLKLTSSSPSSPSPSTNYASVCTLDKVKSALERADKELVKKRSSLWKSTSSP 180

Query: 181 SYSSSSSSAAAAAGKEIQ-EEEAAEVRN-WTTPIAVGCPGCLSYVLVMKNNPRCPRCNSV 240
           SYSSSSS+AA    KEIQ EEEA E RN    P+AVGC GCLSYVLV KNNPRCPRCNSV
Sbjct: 181 SYSSSSSAAA----KEIQEEEEAVENRNEAAAPMAVGCRGCLSYVLVTKNNPRCPRCNSV 240

Query: 241 VPLPSMKKPRIDLNMSI 246
           VPL SMKKPRIDLNMSI
Sbjct: 241 VPLASMKKPRIDLNMSI 250

BLAST of MS006423 vs. ExPASy TrEMBL
Match: A0A6J1GJC7 (uncharacterized protein LOC111454876 OS=Cucurbita moschata OX=3662 GN=LOC111454876 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.7e-95
Identity = 209/263 (79.47%), Postives = 221/263 (84.03%), Query Frame = 0

Query: 1   MAAEVSSLVRVLA-----GYKDEDNRTTLGNGQDQSTALVTRDLLGQSSKLAETQELDLD 60
           MAA+VS+L+RVLA     GY DEDNRT LGNGQ + T LVTRDLLGQSS LA +QELDLD
Sbjct: 1   MAAQVSTLIRVLAGGGGGGYNDEDNRTPLGNGQ-EPTPLVTRDLLGQSSNLAASQELDLD 60

Query: 61  LQVPTGWEKRLDLKSGKVYIQRSKTPDSPVSSDSKQRQHQMINQTESKFQDLNFPPSPSK 120
           LQVP+GWEKRLDLKSGKVYIQRS+TPDSP++SDSK   HQM NQTESKFQDLNFPPSPSK
Sbjct: 61  LQVPSGWEKRLDLKSGKVYIQRSQTPDSPLNSDSK--HHQMTNQTESKFQDLNFPPSPSK 120

Query: 121 RTLNLFSETSLDLKL-------PSSSTNYASVCTLDKVKSALERADKELVKKRSSLWKS- 180
           RTLNLF+ETSLDLKL       PS STNYASVCTLDKVKSALERADKELVKKRSSLWKS 
Sbjct: 121 RTLNLFNETSLDLKLTSSPSPSPSPSTNYASVCTLDKVKSALERADKELVKKRSSLWKST 180

Query: 181 SSPSYSSSSSSAAAAAGKEIQ-EEEAAEVRN----WTTPIAVGCPGCLSYVLVMKNNPRC 240
           SSPSYSSSSS+AA    KEIQ EEEA E RN       P+AVGC GCLSYVLV KNNPRC
Sbjct: 181 SSPSYSSSSSAAA----KEIQEEEEAVENRNEAAVLAAPMAVGCRGCLSYVLVTKNNPRC 240

Query: 241 PRCNSVVPLPSMKKPRIDLNMSI 246
           PRCNSVVPL SMKKPRIDLNMSI
Sbjct: 241 PRCNSVVPLASMKKPRIDLNMSI 256

BLAST of MS006423 vs. ExPASy TrEMBL
Match: A0A6J1EXD9 (uncharacterized protein LOC111437042 OS=Cucurbita moschata OX=3662 GN=LOC111437042 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 5.1e-94
Identity = 195/246 (79.27%), Postives = 213/246 (86.59%), Query Frame = 0

Query: 1   MAAEVSSLVRVLAGYKDEDNRTTLGNGQDQSTALVTRDLLGQSSKLAETQELDLDLQVPT 60
           MAA+VSSL+RVLAGYKD+DNR  L    ++STAL TRDLLGQSS LA++QELDLDLQVP+
Sbjct: 1   MAAQVSSLIRVLAGYKDQDNRAAL----EESTALTTRDLLGQSSNLADSQELDLDLQVPS 60

Query: 61  GWEKRLDLKSGKVYIQRSKTPDSPVSSDSKQRQHQMINQTESKFQDLNFPPSPSKRTLNL 120
           GWEKRLDLKSGKVYIQRS+TPDSP++SDSKQR  QM NQTESK QDLNFPPSPSKRTLNL
Sbjct: 61  GWEKRLDLKSGKVYIQRSQTPDSPLNSDSKQR--QMKNQTESKSQDLNFPPSPSKRTLNL 120

Query: 121 FSETSLDLKLPSSSTNYASVCTLDKVKSALERADKELVKKRSSLWKS-SSPSYSSSSSSA 180
           F+ETSLDL L +SSTNYASVCTLDKVKSALERADKEL+KKRS+LWKS SSPS        
Sbjct: 121 FNETSLDLNL-TSSTNYASVCTLDKVKSALERADKELIKKRSTLWKSPSSPS-------- 180

Query: 181 AAAAGKEIQEEEAAEVRNWTTPIAVGCPGCLSYVLVMKNNPRCPRCNSVVPLPSMKKPRI 240
              A KEIQEEEAAE R    P+AVGCPGCLSYVLV KNNPRCPRCNSVVPLPS+KKPRI
Sbjct: 181 ---AAKEIQEEEAAESRKSAAPMAVGCPGCLSYVLVTKNNPRCPRCNSVVPLPSIKKPRI 228

Query: 241 DLNMSI 246
           DLN+SI
Sbjct: 241 DLNISI 228

BLAST of MS006423 vs. TAIR 10
Match: AT1G79160.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16500.1); Has 104 Blast hits to 102 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 190.7 bits (483), Expect = 1.4e-48
Identity = 129/261 (49.43%), Postives = 162/261 (62.07%), Query Frame = 0

Query: 1   MAAEVSSLVRVLAGYKDEDNRTTLGNGQDQSTALVTRDLL--GQSSKLAETQELDLDLQV 60
           MAA+VSSLVR+L+GYKD+        G   S AL+TRDLL  G+      + ELDLDLQV
Sbjct: 5   MAADVSSLVRLLSGYKDDRAVVKDSAGAKSSAALMTRDLLGNGRGGGGDRSLELDLDLQV 64

Query: 61  PTGWEKRLDLKSGKVYIQRSKTPDSPVSSDSKQRQHQMINQTESKFQDLNFPPSPSKRT- 120
           PTG+EKRLDLKSGKVY+QR  +  S   +++ Q      NQT   FQDLNFPP     + 
Sbjct: 65  PTGYEKRLDLKSGKVYLQRCNSTSSSSITNADQ-----TNQTVPTFQDLNFPPPTLNNSP 124

Query: 121 -LNLFSETSLDLK-LPSS------STNYASVCTLDKVKSALERADKE--LVKKRSSLWKS 180
            LNLF +T+ +LK LPSS      ++N  SVCTLDKVKSALERA+++  + KKR S    
Sbjct: 125 LLNLFDDTTPELKLLPSSRSSRPNTSNLQSVCTLDKVKSALERAERDPAMFKKRQS---P 184

Query: 181 SSPSYSSSSSSAAAAAGKEIQEEEAAEVRNWTTPIAVGCPGCLSYVLVMKNNPRCPRCNS 240
               Y    + A A                  +P+  GCPGCLSYVLVM NNP+CPRC++
Sbjct: 185 DDTVYDHYRTEAVA------------------SPVVAGCPGCLSYVLVMMNNPKCPRCDT 239

Query: 241 VVPLPS---MKKPRIDLNMSI 246
           +VPLP+    KKP+IDLN+SI
Sbjct: 245 IVPLPTNPMKKKPKIDLNISI 239

BLAST of MS006423 vs. TAIR 10
Match: AT1G16500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G79160.1); Has 136 Blast hits to 134 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 131; Viruses - 1; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 188.0 bits (476), Expect = 9.3e-48
Identity = 126/279 (45.16%), Postives = 162/279 (58.06%), Query Frame = 0

Query: 1   MAAEVSSLVRVLAGYKDEDNRTTLGNGQDQSTALVTRDLLGQSSKLA-------ETQELD 60
           MAA+VSSLVR+L+ +KD+        G   + AL+TRDLLG    +        ++ ELD
Sbjct: 1   MAADVSSLVRILSRFKDDRTVVKDSTGPRSTVALMTRDLLGIGGCVGGGGGGDEQSLELD 60

Query: 61  LDLQVPTGWEKRLDLKSGKVYIQRSKTPDSPVSSDSKQRQH--QMINQTESKFQDLNFPP 120
           LD+QVP GWEKRLDLKSGKVY+Q+     S  SS      H     NQT  +FQDLN PP
Sbjct: 61  LDVQVPNGWEKRLDLKSGKVYLQQQCNSTSSSSSSHHHHHHHEDQTNQTVPRFQDLNVPP 120

Query: 121 ----SPSKRTLNLF---SETSLDLKL-----------------PSSSTNY-ASVCTLDKV 180
                P+K  L+LF    +TSL+LKL                 P+ S +Y +SVCTLDKV
Sbjct: 121 ISDKFPAKPLLSLFDDDDDTSLELKLVPSSISRPLPPPLSSFSPNQSLSYLSSVCTLDKV 180

Query: 181 KSALERADKELVKKRSSLWKSSSPSYSSSSSSAAAAAGKEIQEEEAAEVRNWTTPIAVGC 240
           K ALERA+K+  K++S         Y  ++S+  AA                 + +A GC
Sbjct: 181 KLALERAEKDTKKRQS---PEDDGVYDGTASATVAA-----------------SQVAAGC 240

Query: 241 PGCLSYVLVMKNNPRCPRCNSVVPLPSMKKPRIDLNMSI 246
           PGCLSYV V KNNP+CPRC+S VPLP+MKKP+IDLN+S+
Sbjct: 241 PGCLSYVFVAKNNPKCPRCHSFVPLPAMKKPKIDLNISM 259

BLAST of MS006423 vs. TAIR 10
Match: AT3G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 5.7e-05
Identity = 23/68 (33.82%), Postives = 42/68 (61.76%), Query Frame = 0

Query: 169 SPSYSSSSSSAAAAAGKEIQEEEAAEVRNWTTPIAVGCPGCLSYVLVMKNNPRCPRCNSV 228
           SP+ S+++S ++  + +  QEE        T+ + VGCP CL YV++  ++P+CP+C S 
Sbjct: 32  SPNRSNTTSPSSCVSSETNQEEN----ETITSMVLVGCPRCLMYVMLSDDDPKCPKCKST 91

Query: 229 VPLPSMKK 237
           V L  +++
Sbjct: 92  VLLDFLQE 95

BLAST of MS006423 vs. TAIR 10
Match: AT5G22270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits to 136 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 4.8e-04
Identity = 26/66 (39.39%), Postives = 40/66 (60.61%), Query Frame = 0

Query: 169 SPSYSSS--SSSAAAAAGKEIQEEEAAEVRNWTTPIAVGCPGCLSYVLV-MKNNPRCPRC 228
           SPS  SS  + S++++   E  E    E ++    + VGCP C+ Y++  ++N+PRCPRC
Sbjct: 18  SPSLDSSLLTESSSSSLCSEEAEGGGGEAKSM---VVVGCPNCIMYIITSLENDPRCPRC 77

Query: 229 NSVVPL 232
           NS V L
Sbjct: 78  NSHVLL 80

BLAST of MS006423 vs. TAIR 10
Match: AT5G06270.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 4.8e-04
Identity = 25/82 (30.49%), Postives = 45/82 (54.88%), Query Frame = 0

Query: 166 KSSSPSYSSSSSSAAAAAGKEIQEEEAAEVRNWTTP-----IAVGCPGCLSYVLVMKNNP 225
           +S S S ++S +S  ++       ++   VR  T+P     + VGCP CL YV++ +++P
Sbjct: 26  RSPSRSATTSPTSPPSSCVSSEMNQDEPSVRYSTSPETTSMVLVGCPRCLMYVMLSEDDP 85

Query: 226 RCPRCNSVVPLPSMKKPRIDLN 243
           +CP+C S V L  + +   + N
Sbjct: 86  KCPKCKSTVLLDFLHENATNAN 107

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004139833.11.3e-10788.71uncharacterized protein LOC101214550 [Cucumis sativus] >KGN44280.1 hypothetical ... [more]
XP_008447115.11.1e-10687.55PREDICTED: uncharacterized protein LOC103489640 [Cucumis melo][more]
XP_022969452.11.7e-9682.10uncharacterized protein LOC111468450 [Cucurbita maxima][more]
XP_022952111.15.6e-9579.47uncharacterized protein LOC111454876 [Cucurbita moschata][more]
XP_023553772.17.3e-9580.46uncharacterized protein DDB_G0280205 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q9SRN48.0e-0433.82Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1... [more]
Match NameE-valueIdentityDescription
A0A0A0K3J96.2e-10888.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G238440 PE=4 SV=1[more]
A0A1S3BGM65.2e-10787.55uncharacterized protein LOC103489640 OS=Cucumis melo OX=3656 GN=LOC103489640 PE=... [more]
A0A6J1HWE18.4e-9782.10uncharacterized protein LOC111468450 OS=Cucurbita maxima OX=3661 GN=LOC111468450... [more]
A0A6J1GJC72.7e-9579.47uncharacterized protein LOC111454876 OS=Cucurbita moschata OX=3662 GN=LOC1114548... [more]
A0A6J1EXD95.1e-9479.27uncharacterized protein LOC111437042 OS=Cucurbita moschata OX=3662 GN=LOC1114370... [more]
Match NameE-valueIdentityDescription
AT1G79160.11.4e-4849.43unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G16500.19.3e-4845.16unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G11600.15.7e-0533.82unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response... [more]
AT5G22270.14.8e-0439.39unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G06270.14.8e-0430.49unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 143..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..110
NoneNo IPR availablePANTHERPTHR33177:SF44F3O9.30coord: 1..244
NoneNo IPR availablePANTHERPTHR33177PUTATIVE-RELATEDcoord: 1..244

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS006423.1MS006423.1mRNA