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MS006421 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGCAGTTGATTCGCCGCCTTTCCCGAGTCGCTGATTCCTCTCAATATTGTCTTCTCCGATCCGACTCTCAATCCGCCACCAAACTCCGCCGTTCGCGAATTCTCCGTTCCGCCACCGTGCCTCAGGGCCACGTCCCCGTTTACGTCGGAGAAGAGATGGAGAGGTTCGTGGTCAGCGCTCAGCTCCTGAACCACCCGATCTTTGTGGAGCTCCTCAACAAATCCGCCCAAGAGTACGGCTACGAACAAAAAGGCGTTCTACACATTCCCTGTCACGTTCTCCTCTTCGAGCGGGTCCTCGAGGCTCTCAGAGTCGGTGATTACGCCTCGCCTCATCTCCAAGATCTTCTTTCCTCCCTCTCTCCAGACCTCCAC ATGAAGCAGTTGATTCGCCGCCTTTCCCGAGTCGCTGATTCCTCTCAATATTGTCTTCTCCGATCCGACTCTCAATCCGCCACCAAACTCCGCCGTTCGCGAATTCTCCGTTCCGCCACCGTGCCTCAGGGCCACGTCCCCGTTTACGTCGGAGAAGAGATGGAGAGGTTCGTGGTCAGCGCTCAGCTCCTGAACCACCCGATCTTTGTGGAGCTCCTCAACAAATCCGCCCAAGAGTACGGCTACGAACAAAAAGGCGTTCTACACATTCCCTGTCACGTTCTCCTCTTCGAGCGGGTCCTCGAGGCTCTCAGAGTCGGTGATTACGCCTCGCCTCATCTCCAAGATCTTCTTTCCTCCCTCTCTCCAGACCTCCAC ATGAAGCAGTTGATTCGCCGCCTTTCCCGAGTCGCTGATTCCTCTCAATATTGTCTTCTCCGATCCGACTCTCAATCCGCCACCAAACTCCGCCGTTCGCGAATTCTCCGTTCCGCCACCGTGCCTCAGGGCCACGTCCCCGTTTACGTCGGAGAAGAGATGGAGAGGTTCGTGGTCAGCGCTCAGCTCCTGAACCACCCGATCTTTGTGGAGCTCCTCAACAAATCCGCCCAAGAGTACGGCTACGAACAAAAAGGCGTTCTACACATTCCCTGTCACGTTCTCCTCTTCGAGCGGGTCCTCGAGGCTCTCAGAGTCGGTGATTACGCCTCGCCTCATCTCCAAGATCTTCTTTCCTCCCTCTCTCCAGACCTCCAC MKQLIRRLSRVADSSQYCLLRSDSQSATKLRRSRILRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCHVLLFERVLEALRVGDYASPHLQDLLSSLSPDLH Homology
BLAST of MS006421 vs. NCBI nr
Match: XP_022147859.1 (auxin-responsive protein SAUR71 [Momordica charantia]) HSP 1 Score: 248.4 bits (633), Expect = 3.2e-62 Identity = 125/126 (99.21%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of MS006421 vs. NCBI nr
Match: XP_022969445.1 (auxin-responsive protein SAUR71 [Cucurbita maxima]) HSP 1 Score: 219.9 bits (559), Expect = 1.2e-53 Identity = 112/123 (91.06%), Postives = 118/123 (95.93%), Query Frame = 0
BLAST of MS006421 vs. NCBI nr
Match: KAA0051102.1 (auxin-responsive protein SAUR71-like [Cucumis melo var. makuwa] >TYK02692.1 auxin-responsive protein SAUR71-like [Cucumis melo var. makuwa]) HSP 1 Score: 219.9 bits (559), Expect = 1.2e-53 Identity = 113/126 (89.68%), Postives = 119/126 (94.44%), Query Frame = 0
BLAST of MS006421 vs. NCBI nr
Match: XP_038888278.1 (auxin-responsive protein SAUR71 [Benincasa hispida]) HSP 1 Score: 219.5 bits (558), Expect = 1.6e-53 Identity = 114/127 (89.76%), Postives = 118/127 (92.91%), Query Frame = 0
BLAST of MS006421 vs. NCBI nr
Match: XP_008466916.1 (PREDICTED: auxin-responsive protein SAUR71-like [Cucumis melo]) HSP 1 Score: 219.5 bits (558), Expect = 1.6e-53 Identity = 113/127 (88.98%), Postives = 119/127 (93.70%), Query Frame = 0
BLAST of MS006421 vs. ExPASy Swiss-Prot
Match: Q9LTV3 (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 5.2e-39 Identity = 86/127 (67.72%), Postives = 103/127 (81.10%), Query Frame = 0
BLAST of MS006421 vs. ExPASy Swiss-Prot
Match: Q9SGU2 (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 4.1e-36 Identity = 76/107 (71.03%), Postives = 90/107 (84.11%), Query Frame = 0
BLAST of MS006421 vs. ExPASy Swiss-Prot
Match: Q9SA49 (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 2.9e-34 Identity = 81/135 (60.00%), Postives = 98/135 (72.59%), Query Frame = 0
BLAST of MS006421 vs. ExPASy Swiss-Prot
Match: O64538 (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 3.7e-29 Identity = 72/129 (55.81%), Postives = 92/129 (71.32%), Query Frame = 0
BLAST of MS006421 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 4.5e-11 Identity = 34/83 (40.96%), Postives = 54/83 (65.06%), Query Frame = 0
BLAST of MS006421 vs. ExPASy TrEMBL
Match: A0A6J1D294 (auxin-responsive protein SAUR71 OS=Momordica charantia OX=3673 GN=LOC111016696 PE=3 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 1.5e-62 Identity = 125/126 (99.21%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of MS006421 vs. ExPASy TrEMBL
Match: A0A5A7U5G4 (Auxin-responsive protein SAUR71-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1161G00200 PE=3 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 5.9e-54 Identity = 113/126 (89.68%), Postives = 119/126 (94.44%), Query Frame = 0
BLAST of MS006421 vs. ExPASy TrEMBL
Match: A0A6J1HZY4 (auxin-responsive protein SAUR71 OS=Cucurbita maxima OX=3661 GN=LOC111468444 PE=3 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 5.9e-54 Identity = 112/123 (91.06%), Postives = 118/123 (95.93%), Query Frame = 0
BLAST of MS006421 vs. ExPASy TrEMBL
Match: A0A1S3CSH0 (auxin-responsive protein SAUR71-like OS=Cucumis melo OX=3656 GN=LOC103504274 PE=3 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 7.7e-54 Identity = 113/127 (88.98%), Postives = 119/127 (93.70%), Query Frame = 0
BLAST of MS006421 vs. ExPASy TrEMBL
Match: A0A6J1GJB9 (auxin-responsive protein SAUR71-like OS=Cucurbita moschata OX=3662 GN=LOC111454824 PE=3 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 1.0e-53 Identity = 112/125 (89.60%), Postives = 118/125 (94.40%), Query Frame = 0
BLAST of MS006421 vs. TAIR 10
Match: AT3G12830.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 161.8 bits (408), Expect = 3.7e-40 Identity = 86/127 (67.72%), Postives = 103/127 (81.10%), Query Frame = 0
BLAST of MS006421 vs. TAIR 10
Match: AT1G56150.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 152.1 bits (383), Expect = 2.9e-37 Identity = 76/107 (71.03%), Postives = 90/107 (84.11%), Query Frame = 0
BLAST of MS006421 vs. TAIR 10
Match: AT1G16510.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 146.0 bits (367), Expect = 2.1e-35 Identity = 81/135 (60.00%), Postives = 98/135 (72.59%), Query Frame = 0
BLAST of MS006421 vs. TAIR 10
Match: AT1G79130.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 129.0 bits (323), Expect = 2.6e-30 Identity = 72/129 (55.81%), Postives = 92/129 (71.32%), Query Frame = 0
BLAST of MS006421 vs. TAIR 10
Match: AT5G10990.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 69.7 bits (169), Expect = 1.9e-12 Identity = 37/76 (48.68%), Postives = 46/76 (60.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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