MS006384 (gene) Bitter gourd (TR) v1

Overview


Name	MS006384
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Actin-related protein 2/3 complex subunit
Location	scaffold327: 249839 .. 254778 (+)
RNA-Seq Expression	MS006384
Synteny	MS006384

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGTTGCATTTTGTCCAAACAATAATGAAGTTCACATTTATAAGTCATTACAAGACAACTGGGAGAGAGTACATGTTCTTCAAAAGGTACCTTTTACATTTTTTCTTTCTATACATGGGTGATGATTTCCTGTTTTTATTCAGGTCCTGTGTAGTTAGTTTGAAGTGAAAATATTGCGATAAAGGCATCTTGTTAATTACTATCAATTTATCCACTTTTTCTGTGTCAGCATGATCAAATTATCTCTGGGATAGACTGGAGTGTAAGGTCGAACAAAATTGTGACTGCATCCCATGATCGAAATTCGTAAGTGTTATCTTAAGTAATATTTATGTTTTCTCCCCTCTAGTTATCGCTCCCTCCTCCAATCCCCGTCTGGTCTATTTTAGATCATTTTTCAAGACGTTTACTTGTTTATATGTACCATATTGGCCTCCAAACATACTTCTTTTTTTTTTTTCTAGATATGTTTGGAACCTTGAAAAATCAGAATGGGTGCCTACTCTGGTCATTCTTAGACTAAACCGTGCTGCCCTTTGTGTTCGGTGGAGTCCCAAAGGTAATGGGGTATTTCCTGCCCTGCTCTCACTCTTCGCTTTTGTTGTTCATATCATCCTTAAATTTCTTAATCAGCTTAGTCAATCGTGCAATCAGTTTTAATAAAATTTTAGTCAATGCTCCATTACCTCTGCTCACAAGAAATTTGTGAATACCCGAATCCCGTTAAAGAAGTTTCCAAATTTAAAAGATTTGTCATTTATGTTATTTATGAATGTGATATCAAGTAGACCTGGTATTGGTAAACATGAACTGATTCTTGAGGTTTACATATCTTCTGTTAATATGCTGGATCATGAAAATCCCTTGGACAAAATGTGAAAATAATTTCGTGTGTTGTTTTTTATAGTGTTTGGCCCCTTTGTGAATGCTGATGGGTACTGGATTATTGAAATAGATCATAGGTATAAAAGATCTGAGATCTCTCTAACTCTCCCAAGACTCACTCAAGTACCAATATACCAAAAAACATACCTATTGTGTAATCCACTGCTTCCTTGCCCTATATACTCTTTCTCTCTTGAACGATATTCACACAACAGCCCCCCAGTGACTAACTAAAAAGCTTTGGGGCCCACACCATTATAATTACGACATAATACTAATTTCCTTTTCATATCTCAATGAGAAGTTCCTATCTTGTTCAAAAAATTACGACGTAATACTAATTAGGCCTACTCTTCCCTTTCTTATGTGAATATACCATAAGGATCAGGATCTATCAAATGACTCTAGTGGCTTTGTCTATCACTTCTTTTCCTGCATTGGTCAATGCCATTTAAGTTCTTACATAATTTATTGTTATTCATAAATTATAATATCCTGAAGAAAATACTACTTTGATCTAATTTCAGTCTTTACTTCTCTTGTAAATGCTTTATTTTCCTCCTTGCCCTAGAAAACAAGTTTGCTGTTGGAAGTGGAGCAAAAACTGTTTGCATATGCTACTATGAACAAGAGAATAATTGGTATGGTTTTTTCTTTATTTTTTTTGTTCAAGCCATTGTGTCTATTGCTTTTATTTTTTCAGATGGAAACTTTTTTATCTGATGAAGTTGTTGCTATTAGTTCTTATATTATTTAAGAAAAAATCTGTATATTCTAGCTTTGACCTGCATAAGTTGAACTAGAAGCGTTATTTAAAACGTTAGTCAAATGCCTGCGAAATTCATCATGGTTCTTTTACGACTGCTGTTGGCTCTCTCAAACTTTGGTGTTTATTTTCTTTCCGACACTTGATGCAAAAAATTCAGTTTGTGGACCATATTTGGAATCAGTGCATGCTTCTATGCATTTGTTTATGAAAAATGTTATAAGTCATTTACTGTATTTATATGGTTGATCAAATTTTATTAGATTGAACTAATAGTCCATATTATGCGGAGGAATGGAATCAAAATTCAGTTGATACTGTTGATGATTTCTATATTTATACCATAATATTTTTCCTTTGACCTAGGCAGGATGCTGTGGAGGTGCATATTTAGTGAACTCTCTTTTTGTTGGTTTTATTCATTTATGTCTATGTATCTATTTTTCTCTTTATATGTTTGGGCTGCTTCTTGTGATATGCAATCTTTTTGTTCCATGGGCTTTGTAATCCGATGCTTTGGTTTATTTTCTTTTCATAATTAATATATTTTTGTTTCTTATCAGAAATGACAAATCTCTTTATTATTGCTTCACCTAATTATGCTTATGCATTAGTTTTCCATATTTGACATGTTCATGGTTTACCTTCCACAGGTGGGTCAGTAAACTTATCAGGAAAAGACACGATTCTTCTGTGACAAATGTCGCTTGGCATCCCAATAATGTTTGTTTTATCTTTCTATCCACTTATATTTCTGAATTTATATGAATGTTAATTTTAGATTTTTAGAAGATCTCAAATTAAGTATATTTTAGCGCTTGCTTGTAACTTTGTTTTTCTGAACAAAATTGTGGTTGCCTTTTTCGGTTATGAACTTTCTTCTACATTTTATTCACAGCTGCTTCTTGCAACAACCTCAACAGATGGGAAATGTCGAATCTTTTCCACCTTCATTAAAGGTGTTGACAAAAAGTATGTAGAGAATAGTTTAGACTGTAGTAATCTCATGAAATATTTTAGGATTGATTTAGAAGTTACTAATGCTTAATTGGAATTTCCCAGGGATTCAAAAGCCGGTGCATTTTCAGATTCAAAGTTCGGAGAGGTTTGATATTCAGTCTTTTATTTTGCGGTCAATGAATCTTCTTGTGCTTGGAAGAGTAGAATAGTGTAATTGTTTGTAATATAATTCCTTGTTTCGCAGCCACCCTTGCCATAAAATAAACTTGAAAAAATTACTCTTCACATCAAGTGCTTTCTGATAGTTATCTTTTAATTCAAATTTAAATGCTTTGAAATGTTCCCTAGAAAAATACGTGGTTCAGTATCTTTATCCACAGTTTCTCTCTCTATTTTGATGAGCGTAGTAGTGCATATTATTCACGAGTAATTTCTTTTGGTGAATTAGTTAATTGTTCAGCTTGACCTTTCGTTCTCTTGGGCATTTGGCGTGAAGTGGTCACCAAGTGGCAATACCTTAGCTTATGCAGGTAAGAAATATCTCATCTCTGCATATTATTTACAGAGATAACCTTATAACTACAGCGTGTTAAATAGCAACAAGTTTGAATTTCACTCATATAGTCAAGTCACATATATATCATTTCTGCCTCTGACTGTAACTGTGGAAAAGTTCATCGGTTAACTTTTATAACTTGTTATTTAAGAATTGTAACCATGAAACTTCATGTATTGTTTTGATTACCTTTTGATTTTGGTGTTGAAAACAAGTTATAGGATTCTATGAGAACCTCATTGGTTATGCTCTAGTTTAGATGGTGACCTGCTTCTTTTCCTTTGATATGCCTTTTATTTATGTGTTGCTTGCAGGTCACAATTCGATGATTTACTTTGTTGATGAAGTTGGTCCTTCTCCTCTAGCTCAGAATGTTCCATTTCGAGATTTGCCTCTTCGTGATGTGGGTCAGCATCCATTTTTCTTTATTCTTCGAGTATTTCTTATCATGATTTAGATACAATTGACTATTTCGATTTCTAATCTTGAATTTTTTTGGGTCAATATAACACTCTTTCAGATACTATTTGTTTCTGAGAGAATGGTTATAGGTGTTGGATATGATTGCAATCCTATGGTTTTTGCTGCTGATGAAAGAGGGATCTGGTGAGCTAAACTCTACACGGAATGTCTATCTTTAAGAATTTATAATTGTTGAAGAATATAAGTGATTTCTCTGCTTCCCTGCCCCCACCACAACTAGGAGCTTTATAAGATTTCTTGGTGAGAGGAAAGCAACTTCAGGCTCAAATTATGGATCTCAGGTATTGCCTCGCTTGAAGTTTCTGTCAGTTAACAAATACTTTACCACTTAAGCTGTAAACAGAATGGATTGTCAAGTGGCCCCATGCTTAGTTTTCCTTTTAAATTTCTTTTATGTACATTTTCCAGTACCCCTCCACTGGGCTTGGTGGGGCTGCAAGTATATGGACTTAGCTTGACTGCTGAATGTTGGTTTTCCCTGTCATTTTATTCACAGTAGGTCCAACTGTTCTAGTGTTCAATCTAACCGTAAATACACATATCCTCATGTTACGAGGATCACACAGAAGTTATAAACTAACAAGGACGTGAACATCTTAAAACAGCACTGTAATAATATTAGTTTTGCTGGAAACCCCCACCCCCACATGTTGTATCCCAAAAAAAAATAATAATAATAATATTAGTATTGCTGGAAGTTAATACACTTTGCTAGCTGCTTTTGCTAACACGCTTATTTGTGAAATACCTTTTTTCTCCATCAGTTTTCAGAAGCATTTGGGAAGTTATATGGTCAACCGAAACATGGTGTTGGCAATGATTCGGTTGAATCTTCAAGATTGCGTGGATGCGTTCATGAGAACTGCATAAAGTACGTAGTTATTGAATAACCTTTCTGTTGCTTTTAATCTGGTTGATTATTTCTCTTTGTGCATCCCCATGGCCACTTAAATATTGCTTATCCAAAGTGTCTTTTACTGGGAAGGCCTGGTAATCTGAGTGGATTAGCAAAAAGTGGTTATGGACTTGGGGTAGCCTTCATACTGTTAAATGTGCATGAAGTAATACTTCTTTTTGGAACTGTAGTTGTATTGTGCCTCTTAGAGAGCCAAAAGCTTCCACTATAAAGCGATTCAGCACTTCAGGTTTGTTAAAAGGAAGAGATATTACTAAAACTTCTTGTTCTCTGGAAAATGATTGCCAACTTATGAGAGGCTGGTTTTACAGGATTGGATGGAAAAGTGGTCATTTGGGATTTGGAGGGCCAGGGTGATCTATCTCAATACTTG

mRNA sequence

GTGGTTGCATTTTGTCCAAACAATAATGAAGTTCACATTTATAAGTCATTACAAGACAACTGGGAGAGAGTACATGTTCTTCAAAAGCATGATCAAATTATCTCTGGGATAGACTGGAGTGTAAGGTCGAACAAAATTGTGACTGCATCCCATGATCGAAATTCATATGTTTGGAACCTTGAAAAATCAGAATGGGTGCCTACTCTGGTCATTCTTAGACTAAACCGTGCTGCCCTTTGTGTTCGGTGGAGTCCCAAAGAAAACAAGTTTGCTGTTGGAAGTGGAGCAAAAACTGTTTGCATATGCTACTATGAACAAGAGAATAATTGGTGGGTCAGTAAACTTATCAGGAAAAGACACGATTCTTCTGTGACAAATGTCGCTTGGCATCCCAATAATCTGCTTCTTGCAACAACCTCAACAGATGGGAAATGTCGAATCTTTTCCACCTTCATTAAAGGTGTTGACAAAAAGGATTCAAAAGCCGGTGCATTTTCAGATTCAAAGTTCGGAGAGTTAATTGTTCAGCTTGACCTTTCGTTCTCTTGGGCATTTGGCGTGAAGTGGTCACCAAGTGGCAATACCTTAGCTTATGCAGGTCACAATTCGATGATTTACTTTGTTGATGAAGTTGGTCCTTCTCCTCTAGCTCAGAATGTTCCATTTCGAGATTTGCCTCTTCGTGATATACTATTTGTTTCTGAGAGAATGGTTATAGGTGTTGGATATGATTGCAATCCTATGGTTTTTGCTGCTGATGAAAGAGGGATCTGGAGCTTTATAAGATTTCTTGGTGAGAGGAAAGCAACTTCAGGCTCAAATTATGGATCTCAGTTTTCAGAAGCATTTGGGAAGTTATATGGTCAACCGAAACATGGTGTTGGCAATGATTCGGTTGAATCTTCAAGATTGCGTGGATGCGTTCATGAGAACTGCATAAATTGTATTGTGCCTCTTAGAGAGCCAAAAGCTTCCACTATAAAGCGATTCAGCACTTCAGGATTGGATGGAAAAGTGGTCATTTGGGATTTGGAGGGCCAGGGTGATCTATCTCAATACTTG

Coding sequence (CDS)

GTGGTTGCATTTTGTCCAAACAATAATGAAGTTCACATTTATAAGTCATTACAAGACAACTGGGAGAGAGTACATGTTCTTCAAAAGCATGATCAAATTATCTCTGGGATAGACTGGAGTGTAAGGTCGAACAAAATTGTGACTGCATCCCATGATCGAAATTCATATGTTTGGAACCTTGAAAAATCAGAATGGGTGCCTACTCTGGTCATTCTTAGACTAAACCGTGCTGCCCTTTGTGTTCGGTGGAGTCCCAAAGAAAACAAGTTTGCTGTTGGAAGTGGAGCAAAAACTGTTTGCATATGCTACTATGAACAAGAGAATAATTGGTGGGTCAGTAAACTTATCAGGAAAAGACACGATTCTTCTGTGACAAATGTCGCTTGGCATCCCAATAATCTGCTTCTTGCAACAACCTCAACAGATGGGAAATGTCGAATCTTTTCCACCTTCATTAAAGGTGTTGACAAAAAGGATTCAAAAGCCGGTGCATTTTCAGATTCAAAGTTCGGAGAGTTAATTGTTCAGCTTGACCTTTCGTTCTCTTGGGCATTTGGCGTGAAGTGGTCACCAAGTGGCAATACCTTAGCTTATGCAGGTCACAATTCGATGATTTACTTTGTTGATGAAGTTGGTCCTTCTCCTCTAGCTCAGAATGTTCCATTTCGAGATTTGCCTCTTCGTGATATACTATTTGTTTCTGAGAGAATGGTTATAGGTGTTGGATATGATTGCAATCCTATGGTTTTTGCTGCTGATGAAAGAGGGATCTGGAGCTTTATAAGATTTCTTGGTGAGAGGAAAGCAACTTCAGGCTCAAATTATGGATCTCAGTTTTCAGAAGCATTTGGGAAGTTATATGGTCAACCGAAACATGGTGTTGGCAATGATTCGGTTGAATCTTCAAGATTGCGTGGATGCGTTCATGAGAACTGCATAAATTGTATTGTGCCTCTTAGAGAGCCAAAAGCTTCCACTATAAAGCGATTCAGCACTTCAGGATTGGATGGAAAAGTGGTCATTTGGGATTTGGAGGGCCAGGGTGATCTATCTCAATACTTG

Protein sequence

VVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGIDWSVRSNKIVTASHDRNSYVWNLEKSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDKKDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNVPFRDLPLRDILFVSERMVIGVGYDCNPMVFAADERGIWSFIRFLGERKATSGSNYGSQFSEAFGKLYGQPKHGVGNDSVESSRLRGCVHENCINCIVPLREPKASTIKRFSTSGLDGKVVIWDLEGQGDLSQYL

Homology

[Close]

BLAST of MS006384 vs. NCBI nr
Match: XP_022148037.1 (actin-related protein 2/3 complex subunit 1A-like [Momordica charantia])

HSP 1 Score: 743.8 bits (1919), Expect = 6.8e-211
Identity = 352/354 (99.44%), Postives = 354/354 (100.00%), Query Frame = 0


Query: 1   VVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGIDWSVRSNKIVTASHDRNSYVWNL 60
           +VAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGIDWSVRSNKIVTASHDRNSYVWNL
Sbjct: 24  MVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGIDWSVRSNKIVTASHDRNSYVWNL 83

Query: 61  EKSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH 120
           EKSEWVPTLVILRLNRAALCV+WSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH
Sbjct: 84  EKSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH 143

Query: 121 DSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDKKDSKAGAFSDSKFGELIVQLDLS 180
           DSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDKKDSKAGAFSDSKFGELIVQLDLS
Sbjct: 144 DSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDKKDSKAGAFSDSKFGELIVQLDLS 203

Query: 181 FSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNVPFRDLPLRDILFVSERMVIG 240
           FSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNVPFRDLPLRDILFVSERMVIG
Sbjct: 204 FSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNVPFRDLPLRDILFVSERMVIG 263

Query: 241 VGYDCNPMVFAADERGIWSFIRFLGERKATSGSNYGSQFSEAFGKLYGQPKHGVGNDSVE 300
           VGYDCNPMVFAADERGIWSFIRFLGERKATSGSNYGSQFSEAFGKLYGQPKHGVGNDSVE
Sbjct: 264 VGYDCNPMVFAADERGIWSFIRFLGERKATSGSNYGSQFSEAFGKLYGQPKHGVGNDSVE 323

Query: 301 SSRLRGCVHENCINCIVPLREPKASTIKRFSTSGLDGKVVIWDLEGQGDLSQYL 355
           SSRLRGCVHENCINCIVPLREPKASTIKRFSTSGLDGKVVIWDLEGQGDLSQYL
Sbjct: 324 SSRLRGCVHENCINCIVPLREPKASTIKRFSTSGLDGKVVIWDLEGQGDLSQYL 377

[Close]

BLAST of MS006384 vs. NCBI nr
Match: XP_008449504.1 (PREDICTED: actin-related protein 2/3 complex subunit 1A-like [Cucumis melo])

HSP 1 Score: 707.6 bits (1825), Expect = 5.4e-200
Identity = 332/354 (93.79%), Postives = 342/354 (96.61%), Query Frame = 0


Query: 1   VVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGIDWSVRSNKIVTASHDRNSYVWNL 60
           +VAFCPNNNEVHIYKSLQDNWERVHVLQKHDQ+ISGIDWSVRSN+IVTASHDRNSYVWNL
Sbjct: 24  MVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQLISGIDWSVRSNRIVTASHDRNSYVWNL 83

Query: 61  EKSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH 120
           E SEWVPTLVILRLNRAALCV+WSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH
Sbjct: 84  EGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH 143

Query: 121 DSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDKKDSKAGAFSDSKFGELIVQLDLS 180
           DSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVD KDS+AG FSDSKFGELIVQLDLS
Sbjct: 144 DSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDTKDSRAGTFSDSKFGELIVQLDLS 203

Query: 181 FSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNVPFRDLPLRDILFVSERMVIG 240
           FSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNV FRDLPLRDILFVSERMVIG
Sbjct: 204 FSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNVAFRDLPLRDILFVSERMVIG 263

Query: 241 VGYDCNPMVFAADERGIWSFIRFLGERKATSGSNYGSQFSEAFGKLYGQPKHGVGNDSVE 300
           VG+DC+PM FAADERGIWSF+RFLGERK  SGS YGSQFSEAFGKLYGQP+ GVGNDSVE
Sbjct: 264 VGFDCHPMAFAADERGIWSFVRFLGERKTASGSKYGSQFSEAFGKLYGQPRQGVGNDSVE 323

Query: 301 SSRLRGCVHENCINCIVPLREPKASTIKRFSTSGLDGKVVIWDLEGQGDLSQYL 355
           SSRLRGCVHENCINCIVPL+EP  STIKRFSTSGLDGKVVIWDLEGQ DLSQYL
Sbjct: 324 SSRLRGCVHENCINCIVPLKEPGVSTIKRFSTSGLDGKVVIWDLEGQDDLSQYL 377

[Close]

BLAST of MS006384 vs. NCBI nr
Match: XP_023553744.1 (actin-related protein 2/3 complex subunit 1B-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 703.4 bits (1814), Expect = 1.0e-198
Identity = 332/354 (93.79%), Postives = 339/354 (95.76%), Query Frame = 0


Query: 1   VVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGIDWSVRSNKIVTASHDRNSYVWNL 60
           +VAFCPNNNEVHIYKSLQDNWERVHVLQKHDQ+ISGIDWSVRSN+IVTASHDRNSYVWNL
Sbjct: 24  MVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQLISGIDWSVRSNRIVTASHDRNSYVWNL 83

Query: 61  EKSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH 120
           E SEWVPTLVILRLNRAALCV+WSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH
Sbjct: 84  EGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH 143

Query: 121 DSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDKKDSKAGAFSDSKFGELIVQLDLS 180
           DSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVD KDS+AG FSDSKFGELIVQLDLS
Sbjct: 144 DSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDTKDSRAGKFSDSKFGELIVQLDLS 203

Query: 181 FSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNVPFRDLPLRDILFVSERMVIG 240
           FSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQ+V FRDLPLRDILFVSERMVIG
Sbjct: 204 FSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQSVAFRDLPLRDILFVSERMVIG 263

Query: 241 VGYDCNPMVFAADERGIWSFIRFLGERKATSGSNYGSQFSEAFGKLYGQPKHGVGNDSVE 300
            G+DCNPM FAADERGIWSFIRFLGERK  SGS YGSQFSEAFGKLYGQ K GVGNDSVE
Sbjct: 264 TGFDCNPMAFAADERGIWSFIRFLGERKTASGSKYGSQFSEAFGKLYGQSKQGVGNDSVE 323

Query: 301 SSRLRGCVHENCINCIVPLREPKASTIKRFSTSGLDGKVVIWDLEGQGDLSQYL 355
           SSRLRGCVHENCI CIVPLREP  STIKRFSTSGLDGKVVIWDLEGQ DLSQYL
Sbjct: 324 SSRLRGCVHENCITCIVPLREPGVSTIKRFSTSGLDGKVVIWDLEGQADLSQYL 377

[Close]

BLAST of MS006384 vs. NCBI nr
Match: XP_038886984.1 (actin-related protein 2/3 complex subunit 1A-like [Benincasa hispida])

HSP 1 Score: 702.6 bits (1812), Expect = 1.7e-198
Identity = 332/354 (93.79%), Postives = 340/354 (96.05%), Query Frame = 0


Query: 1   VVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGIDWSVRSNKIVTASHDRNSYVWNL 60
           +VAFCPNNNEVHIYKSLQDNWERVHVLQKHDQ+ISGIDWSVRSN+IVTASHDRNSYVWNL
Sbjct: 24  MVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQLISGIDWSVRSNRIVTASHDRNSYVWNL 83

Query: 61  EKSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH 120
           E SEWVPTLVILRLNRAALCV+WSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH
Sbjct: 84  EGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH 143

Query: 121 DSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDKKDSKAGAFSDSKFGELIVQLDLS 180
           DSSVTNVAWHPNNLLLATTSTDGKCRIF+TFIKGVD KDS+AG FSDSKFGELIVQLDLS
Sbjct: 144 DSSVTNVAWHPNNLLLATTSTDGKCRIFATFIKGVDTKDSRAGTFSDSKFGELIVQLDLS 203

Query: 181 FSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNVPFRDLPLRDILFVSERMVIG 240
           FSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNV FRDLPLRDILFVSERMVIG
Sbjct: 204 FSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNVAFRDLPLRDILFVSERMVIG 263

Query: 241 VGYDCNPMVFAADERGIWSFIRFLGERKATSGSNYGSQFSEAFGKLYGQPKHGVGNDSVE 300
           VG+DCNPM FAADERGIWSFIRFLGERK  SGS YGSQFSEAFGKLYGQP+ GVGNDSVE
Sbjct: 264 VGFDCNPMAFAADERGIWSFIRFLGERKPASGSKYGSQFSEAFGKLYGQPRQGVGNDSVE 323

Query: 301 SSRLRGCVHENCINCIVPLREPKASTIKRFSTSGLDGKVVIWDLEGQGDLSQYL 355
           SSRLRGCVHENCIN IVPLRE   STIKRFSTSGLDGKVVIWDLEGQ DLSQYL
Sbjct: 324 SSRLRGCVHENCINSIVPLRERGVSTIKRFSTSGLDGKVVIWDLEGQADLSQYL 377

[Close]

BLAST of MS006384 vs. NCBI nr
Match: XP_022952913.1 (actin-related protein 2/3 complex subunit 1B isoform X1 [Cucurbita moschata] >KAG6572430.1 Actin-related protein 2/3 complex subunit 1A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 700.3 bits (1806), Expect = 8.6e-198
Identity = 331/354 (93.50%), Postives = 338/354 (95.48%), Query Frame = 0


Query: 1   VVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGIDWSVRSNKIVTASHDRNSYVWNL 60
           +VAFCPNNNEVHIYKSLQDNWERVHVLQKHDQ+ISGIDWSVRSN+IVTASHDRNSYVWNL
Sbjct: 24  MVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQLISGIDWSVRSNRIVTASHDRNSYVWNL 83

Query: 61  EKSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH 120
           E SEWVPTLVILRLNRAALCV+WSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH
Sbjct: 84  EGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH 143

Query: 121 DSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDKKDSKAGAFSDSKFGELIVQLDLS 180
           DSSVTNVAWH NNLLLATTSTDGKCRIFSTFIKGVD KDS+AG FSDSKFGELIVQLDLS
Sbjct: 144 DSSVTNVAWHTNNLLLATTSTDGKCRIFSTFIKGVDTKDSRAGKFSDSKFGELIVQLDLS 203

Query: 181 FSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNVPFRDLPLRDILFVSERMVIG 240
           FSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQ+V FRDLPLRDILFVSERMVIG
Sbjct: 204 FSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQSVAFRDLPLRDILFVSERMVIG 263

Query: 241 VGYDCNPMVFAADERGIWSFIRFLGERKATSGSNYGSQFSEAFGKLYGQPKHGVGNDSVE 300
            G+DCNPM FAADERGIWSFIRFLGERK  SGS YGSQFSEAFGKLYGQ K GVGNDSVE
Sbjct: 264 TGFDCNPMAFAADERGIWSFIRFLGERKTASGSKYGSQFSEAFGKLYGQSKQGVGNDSVE 323

Query: 301 SSRLRGCVHENCINCIVPLREPKASTIKRFSTSGLDGKVVIWDLEGQGDLSQYL 355
           SSRLRGCVHENCI CIVPLREP  STIKRFSTSGLDGKVVIWDLEGQ DLSQYL
Sbjct: 324 SSRLRGCVHENCITCIVPLREPGVSTIKRFSTSGLDGKVVIWDLEGQADLSQYL 377

[Close]

BLAST of MS006384 vs. ExPASy Swiss-Prot
Match: O80856 (Actin-related protein 2/3 complex subunit 1A OS=Arabidopsis thaliana OX=3702 GN=ARPC1A PE=2 SV=1)

HSP 1 Score: 579.3 bits (1492), Expect = 2.9e-164
Identity = 275/348 (79.02%), Postives = 311/348 (89.37%), Query Frame = 0


Query: 1   VVAFCPNNNEVHIYKSL-QDNWERVHVLQKHDQIISGIDWSVRSNKIVTASHDRNSYVWN 60
           +VA CPNN EVHIYKSL QD+WER+HVLQKHDQI+SGIDWS +SNKIVT SHDRNSYVW+
Sbjct: 24  MVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSGIDWSSKSNKIVTVSHDRNSYVWS 83

Query: 61  LEKSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKR 120
           LE +EWVPTLVILRLNRAALCV+WSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKR
Sbjct: 84  LEGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKR 143

Query: 121 HDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDKKDSKAGAFSDSKFGELIVQLDL 180
           H+SSVT+VAWHPNN+LLATTSTDGKCR+FSTFIKGVD KDSKAG+ +++KFGE I+QLDL
Sbjct: 144 HESSVTSVAWHPNNVLLATTSTDGKCRVFSTFIKGVDTKDSKAGSPAETKFGEQILQLDL 203

Query: 181 SFSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNVPFRDLPLRDILFVSERMVI 240
           S+SWAFGVKWSPSGNTLAY GH+SMIYFVD+VGPSPLAQ+V FRDLPLRD+LF+SE+MVI
Sbjct: 204 SYSWAFGVKWSPSGNTLAYVGHSSMIYFVDDVGPSPLAQSVAFRDLPLRDVLFISEKMVI 263

Query: 241 GVGYDCNPMVFAADERGIWSFIRFLGERK-ATSGSNYGSQFSEAFGKLYG-QPKHGVGND 300
           GVGYD NPMVFA+D+ GIWSFIR++GE+K A+S S+Y SQFSEAFGK YG Q K    ND
Sbjct: 264 GVGYDSNPMVFASDDTGIWSFIRYIGEKKAASSNSSYSSQFSEAFGKFYGSQSKSTTAND 323

Query: 301 SVESSRLRGCVHENCINCIVPLREPKASTIKRFSTSGLDGKVVIWDLE 346
           + ES   RG VH+NCIN IV L +  +  + RFSTSGLDGKV IWDLE
Sbjct: 324 ASES---RGGVHDNCINSIVSLSKAGSPKVMRFSTSGLDGKVAIWDLE 368

[Close]

BLAST of MS006384 vs. ExPASy Swiss-Prot
Match: Q9SJW6 (Actin-related protein 2/3 complex subunit 1B OS=Arabidopsis thaliana OX=3702 GN=ARPC1B PE=2 SV=1)

HSP 1 Score: 577.4 bits (1487), Expect = 1.1e-163
Identity = 274/348 (78.74%), Postives = 311/348 (89.37%), Query Frame = 0


Query: 1   VVAFCPNNNEVHIYKSL-QDNWERVHVLQKHDQIISGIDWSVRSNKIVTASHDRNSYVWN 60
           +VA CPNN EVHIYKSL QD+WER+HVLQKHDQI+SGIDWS +SNKIVT SHDRNSYVW+
Sbjct: 24  MVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSGIDWSSKSNKIVTVSHDRNSYVWS 83

Query: 61  LEKSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKR 120
           LE +EWVPTLVILRLNRAALCV+WSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKR
Sbjct: 84  LEGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKR 143

Query: 121 HDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDKKDSKAGAFSDSKFGELIVQLDL 180
           H+SSVT+VAWHPNN+LLATTSTDGKCR+FSTFIKGVD KDSKAG+ +++KFGE I+QLDL
Sbjct: 144 HESSVTSVAWHPNNVLLATTSTDGKCRVFSTFIKGVDTKDSKAGSPAETKFGEQILQLDL 203

Query: 181 SFSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNVPFRDLPLRDILFVSERMVI 240
           S+SWAFGVKWSPSGNTLAY GH+SMIYFVD+VGPSPLAQ+V FRDLPLRD+LF+SE+MVI
Sbjct: 204 SYSWAFGVKWSPSGNTLAYVGHSSMIYFVDDVGPSPLAQSVAFRDLPLRDVLFISEKMVI 263

Query: 241 GVGYDCNPMVFAADERGIWSFIRFLGERK-ATSGSNYGSQFSEAFGKLYG-QPKHGVGND 300
           GVGYD NPMVFAAD+ GIWSFIR++GE+K A+SGS+Y SQFSEAFGK YG Q K    ND
Sbjct: 264 GVGYDSNPMVFAADDTGIWSFIRYIGEKKAASSGSSYSSQFSEAFGKFYGSQSKSTTAND 323

Query: 301 SVESSRLRGCVHENCINCIVPLREPKASTIKRFSTSGLDGKVVIWDLE 346
           + +S   RG VH+N I  IVPL +  +  + RFSTSGLDGK+ IWDLE
Sbjct: 324 ASDS---RGGVHDNSITSIVPLGKGGSPKVMRFSTSGLDGKIAIWDLE 368

[Close]

BLAST of MS006384 vs. ExPASy Swiss-Prot
Match: O96622 (Actin-related protein 2/3 complex subunit 1 OS=Dictyostelium discoideum OX=44689 GN=arcA PE=1 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 1.3e-84
Identity = 152/344 (44.19%), Postives = 222/344 (64.53%), Query Frame = 0


Query: 2   VAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGIDWSVRSNKIVTASHDRNSYVWNLE 61
           VA CPNNNEVHIY     +W   HVL +HDQ+++ IDW+ ++N+I+T+S DRN+YVW  +
Sbjct: 25  VALCPNNNEVHIYAKQGTSWVVEHVLAEHDQLVTSIDWAPKTNRILTSSQDRNAYVWTFK 84

Query: 62  KSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHD 121
             +W P LV+LR+NRAA  V+WSP+ENKFAV +GAK VCIC++E+E++WW S  I K+H 
Sbjct: 85  DGQWKPVLVLLRINRAATHVKWSPQENKFAVATGAKLVCICFFEEEHDWWASNHI-KKHK 144

Query: 122 SSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDKKDSKAGAFSDSKFGELIVQLDLSF 181
           S+V  V WHPNNLLLAT+S+D K R+F  +IK  D + S    + +  FGE + + D   
Sbjct: 145 STVLKVDWHPNNLLLATSSSDYKVRVFDAYIKKADGR-SVTRPYGEVAFGEPVFEFDQCA 204

Query: 182 SWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNVPFRDLPLRDILFVSERMVIGV 241
           SW   +KWSPSG+TLAY+ H+ +    +     P  + +  R+LPLRD+L+++E  + GV
Sbjct: 205 SWVHALKWSPSGSTLAYSSHDGVFAVANFSTNPPTIEKLRVRNLPLRDLLYITENSIAGV 264

Query: 242 GYDCNPMVFAADERGIWSFIRFLGERKATSGSNYGSQFSEAFGKLYGQPKHGVGNDSVES 301
           GYDC P++   ++ G W +   + ++ +  G+  GS+ S    KL+ Q K  +G      
Sbjct: 265 GYDCAPLLI-TNQNG-WKYSGEM-DKASEGGAAAGSETSAR--KLF-QNKVDLGESKSAD 324

Query: 302 SRLRGCVHENCINCIVPLREPKASTIKRFSTSGLDGKVVIWDLE 346
            +L   VH+NCI  IVP +      +  FSTSGLDG +V+W ++
Sbjct: 325 KKLT-TVHQNCITSIVPFKS-VGGVVSDFSTSGLDGNIVVWHVK 358

[Close]

BLAST of MS006384 vs. ExPASy Swiss-Prot
Match: Q7ZXD5 (Actin-related protein 2/3 complex subunit 1B-A OS=Xenopus laevis OX=8355 GN=arpc1b-a PE=2 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 1.6e-74
Identity = 146/345 (42.32%), Postives = 211/345 (61.16%), Query Frame = 0


Query: 2   VAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGIDWSVRSNKIVTASHDRNSYVWNLE 61
           +AFCPN+++VHIYK   D W ++H L++H+  ++GIDW+  SN+IVT   DRN+YVW L+
Sbjct: 23  IAFCPNSHDVHIYKKDGDKWSKIHELKEHNGHVTGIDWAPESNRIVTCGTDRNAYVWTLK 82

Query: 62  KSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHD 121
            + W PTLVILR+NRAA CV+WSPKENKFAVGSG++ + ICY+EQEN+WWV K I+K   
Sbjct: 83  NNVWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLISICYFEQENDWWVCKHIKKPIR 142

Query: 122 SSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDKKDSKAGAFSDSKFGELIVQLDLSF 181
           S+V ++ WHPNN+LLA  S+D K RIFS +IK V+++ +     S   FGEL+ +   S 
Sbjct: 143 STVLSLDWHPNNVLLAAGSSDFKSRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSC 202

Query: 182 SWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNVPFRDLPLRDILFVSERMVIGV 241
            W   V +S SG+ +A+  H+S I   D      +   +    LPL  + F++E  ++  
Sbjct: 203 GWVHSVCFSHSGDRMAWVSHDSTICISDATKKMRVTSLIT-DTLPLLCVTFITENSLVAA 262

Query: 242 GYDCNPMVFAADE-RGIWSFIRFLGERKATSGSNYGSQFSEAFGKLYGQPKHGVGNDSVE 301
           G+DC P+++  DE +G  SF   L   K    S  G    E F  L  +      N +++
Sbjct: 263 GHDCFPVLYIYDEAQGTLSFGGKLDIPK--QSSQRGMTARERFQNLDKKASSDTNNITLD 322

Query: 302 SSRLRGCVHENCINCIVPLREPKASTIKRFSTSGLDGKVVIWDLE 346
           S      +H+N I+ +  L   KA   K F T+GLDG + IWD++
Sbjct: 323 S------LHKNSISQLSVLSGGKAKCSK-FCTTGLDGGMCIWDVK 357

[Close]

BLAST of MS006384 vs. ExPASy Swiss-Prot
Match: Q6GNU1 (Actin-related protein 2/3 complex subunit 1B-B OS=Xenopus laevis OX=8355 GN=arpc1b-b PE=1 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 3.6e-74
Identity = 146/345 (42.32%), Postives = 210/345 (60.87%), Query Frame = 0


Query: 2   VAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGIDWSVRSNKIVTASHDRNSYVWNLE 61
           +AFCPN+++VHIYK     W ++H L++H+  ++GIDW+  SN+IVT   DRN+YVW L 
Sbjct: 23  IAFCPNSHDVHIYKKDGVKWTKIHELKEHNGQVTGIDWAPESNRIVTCGTDRNAYVWTLR 82

Query: 62  KSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHD 121
            + W PTLVILR+NRAA CV+WSPKENKFAVGSG++ + ICY+EQEN+WWV K I+K   
Sbjct: 83  NNVWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLISICYFEQENDWWVCKHIKKPIR 142

Query: 122 SSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDKKDSKAGAFSDSKFGELIVQLDLSF 181
           S+V ++ WHPNN+LLA  S+D K RIFS++IK V+++ +     S   FGEL+ +   S 
Sbjct: 143 STVLSLDWHPNNVLLAAGSSDFKSRIFSSYIKEVEERPAPTPWGSKMPFGELMFESSSSC 202

Query: 182 SWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNVPFRDLPLRDILFVSERMVIGV 241
            W   V +S SG+ +A+  H+S I   D      +   +    LPL  + F++E  ++  
Sbjct: 203 GWVHSVCFSNSGDRMAWVSHDSTICIADATKKMRVTSLIT-DTLPLLCVTFITENSLVAA 262

Query: 242 GYDCNPMVFAADE-RGIWSFIRFLGERKATSGSNYGSQFSEAFGKLYGQPKHGVGNDSVE 301
           G+DC P+++  DE +G  SF   L   K    S  G    E F  L  +      N +++
Sbjct: 263 GHDCYPVLYTYDEAQGTLSFGGKLDVPK--QSSQRGMTARERFQNLDKKASSDTNNITLD 322

Query: 302 SSRLRGCVHENCINCIVPLREPKASTIKRFSTSGLDGKVVIWDLE 346
           S      +H+N I+ I  L   KA   K F T+GLDG + IWD++
Sbjct: 323 S------LHKNSISQISVLSGGKAKCSK-FCTTGLDGGMCIWDVK 357

[Close]

BLAST of MS006384 vs. ExPASy TrEMBL
Match: A0A6J1D3Z7 (Actin-related protein 2/3 complex subunit OS=Momordica charantia OX=3673 GN=LOC111016823 PE=3 SV=1)

HSP 1 Score: 743.8 bits (1919), Expect = 3.3e-211
Identity = 352/354 (99.44%), Postives = 354/354 (100.00%), Query Frame = 0


Query: 1   VVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGIDWSVRSNKIVTASHDRNSYVWNL 60
           +VAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGIDWSVRSNKIVTASHDRNSYVWNL
Sbjct: 24  MVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGIDWSVRSNKIVTASHDRNSYVWNL 83

Query: 61  EKSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH 120
           EKSEWVPTLVILRLNRAALCV+WSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH
Sbjct: 84  EKSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH 143

Query: 121 DSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDKKDSKAGAFSDSKFGELIVQLDLS 180
           DSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDKKDSKAGAFSDSKFGELIVQLDLS
Sbjct: 144 DSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDKKDSKAGAFSDSKFGELIVQLDLS 203

Query: 181 FSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNVPFRDLPLRDILFVSERMVIG 240
           FSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNVPFRDLPLRDILFVSERMVIG
Sbjct: 204 FSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNVPFRDLPLRDILFVSERMVIG 263

Query: 241 VGYDCNPMVFAADERGIWSFIRFLGERKATSGSNYGSQFSEAFGKLYGQPKHGVGNDSVE 300
           VGYDCNPMVFAADERGIWSFIRFLGERKATSGSNYGSQFSEAFGKLYGQPKHGVGNDSVE
Sbjct: 264 VGYDCNPMVFAADERGIWSFIRFLGERKATSGSNYGSQFSEAFGKLYGQPKHGVGNDSVE 323

Query: 301 SSRLRGCVHENCINCIVPLREPKASTIKRFSTSGLDGKVVIWDLEGQGDLSQYL 355
           SSRLRGCVHENCINCIVPLREPKASTIKRFSTSGLDGKVVIWDLEGQGDLSQYL
Sbjct: 324 SSRLRGCVHENCINCIVPLREPKASTIKRFSTSGLDGKVVIWDLEGQGDLSQYL 377

[Close]

BLAST of MS006384 vs. ExPASy TrEMBL
Match: A0A1S3BM68 (Actin-related protein 2/3 complex subunit OS=Cucumis melo OX=3656 GN=LOC103491371 PE=3 SV=1)

HSP 1 Score: 707.6 bits (1825), Expect = 2.6e-200
Identity = 332/354 (93.79%), Postives = 342/354 (96.61%), Query Frame = 0


Query: 1   VVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGIDWSVRSNKIVTASHDRNSYVWNL 60
           +VAFCPNNNEVHIYKSLQDNWERVHVLQKHDQ+ISGIDWSVRSN+IVTASHDRNSYVWNL
Sbjct: 24  MVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQLISGIDWSVRSNRIVTASHDRNSYVWNL 83

Query: 61  EKSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH 120
           E SEWVPTLVILRLNRAALCV+WSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH
Sbjct: 84  EGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH 143

Query: 121 DSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDKKDSKAGAFSDSKFGELIVQLDLS 180
           DSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVD KDS+AG FSDSKFGELIVQLDLS
Sbjct: 144 DSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDTKDSRAGTFSDSKFGELIVQLDLS 203

Query: 181 FSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNVPFRDLPLRDILFVSERMVIG 240
           FSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNV FRDLPLRDILFVSERMVIG
Sbjct: 204 FSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNVAFRDLPLRDILFVSERMVIG 263

Query: 241 VGYDCNPMVFAADERGIWSFIRFLGERKATSGSNYGSQFSEAFGKLYGQPKHGVGNDSVE 300
           VG+DC+PM FAADERGIWSF+RFLGERK  SGS YGSQFSEAFGKLYGQP+ GVGNDSVE
Sbjct: 264 VGFDCHPMAFAADERGIWSFVRFLGERKTASGSKYGSQFSEAFGKLYGQPRQGVGNDSVE 323

Query: 301 SSRLRGCVHENCINCIVPLREPKASTIKRFSTSGLDGKVVIWDLEGQGDLSQYL 355
           SSRLRGCVHENCINCIVPL+EP  STIKRFSTSGLDGKVVIWDLEGQ DLSQYL
Sbjct: 324 SSRLRGCVHENCINCIVPLKEPGVSTIKRFSTSGLDGKVVIWDLEGQDDLSQYL 377

[Close]

BLAST of MS006384 vs. ExPASy TrEMBL
Match: A0A6J1GLX8 (Actin-related protein 2/3 complex subunit OS=Cucurbita moschata OX=3662 GN=LOC111455454 PE=3 SV=1)

HSP 1 Score: 700.3 bits (1806), Expect = 4.2e-198
Identity = 331/354 (93.50%), Postives = 338/354 (95.48%), Query Frame = 0


Query: 1   VVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGIDWSVRSNKIVTASHDRNSYVWNL 60
           +VAFCPNNNEVHIYKSLQDNWERVHVLQKHDQ+ISGIDWSVRSN+IVTASHDRNSYVWNL
Sbjct: 24  MVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQLISGIDWSVRSNRIVTASHDRNSYVWNL 83

Query: 61  EKSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH 120
           E SEWVPTLVILRLNRAALCV+WSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH
Sbjct: 84  EGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH 143

Query: 121 DSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDKKDSKAGAFSDSKFGELIVQLDLS 180
           DSSVTNVAWH NNLLLATTSTDGKCRIFSTFIKGVD KDS+AG FSDSKFGELIVQLDLS
Sbjct: 144 DSSVTNVAWHTNNLLLATTSTDGKCRIFSTFIKGVDTKDSRAGKFSDSKFGELIVQLDLS 203

Query: 181 FSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNVPFRDLPLRDILFVSERMVIG 240
           FSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQ+V FRDLPLRDILFVSERMVIG
Sbjct: 204 FSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQSVAFRDLPLRDILFVSERMVIG 263

Query: 241 VGYDCNPMVFAADERGIWSFIRFLGERKATSGSNYGSQFSEAFGKLYGQPKHGVGNDSVE 300
            G+DCNPM FAADERGIWSFIRFLGERK  SGS YGSQFSEAFGKLYGQ K GVGNDSVE
Sbjct: 264 TGFDCNPMAFAADERGIWSFIRFLGERKTASGSKYGSQFSEAFGKLYGQSKQGVGNDSVE 323

Query: 301 SSRLRGCVHENCINCIVPLREPKASTIKRFSTSGLDGKVVIWDLEGQGDLSQYL 355
           SSRLRGCVHENCI CIVPLREP  STIKRFSTSGLDGKVVIWDLEGQ DLSQYL
Sbjct: 324 SSRLRGCVHENCITCIVPLREPGVSTIKRFSTSGLDGKVVIWDLEGQADLSQYL 377

[Close]

BLAST of MS006384 vs. ExPASy TrEMBL
Match: A0A0A0KHX9 (Actin-related protein 2/3 complex subunit OS=Cucumis sativus OX=3659 GN=Csa_6G422800 PE=3 SV=1)

HSP 1 Score: 699.1 bits (1803), Expect = 9.3e-198
Identity = 330/356 (92.70%), Postives = 342/356 (96.07%), Query Frame = 0


Query: 1   VVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGIDWSVRSNKIVTASHDRNSYVWNL 60
           +VAFCPNNNEVHIYKSLQDNWERVHVLQKHDQ+ISGIDWSVRSN+IVTASHDRNSYVWNL
Sbjct: 24  MVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQLISGIDWSVRSNRIVTASHDRNSYVWNL 83

Query: 61  EKSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH 120
           E SEWVPTLVILRLNRAALCV+WSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH
Sbjct: 84  EGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH 143

Query: 121 DSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDKKDSKAGAFSDSKFGELIVQLDLS 180
           DSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVD KDSKAG FSDSKFGELIVQLDLS
Sbjct: 144 DSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDTKDSKAGTFSDSKFGELIVQLDLS 203

Query: 181 FSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNVPFRDLPLRDILFVSERMVIG 240
           FSWAFGVKWS SGNTLAYAGHNSMIYFVDEVGPSPLAQ+V FRDLPLRDILFVSERMVIG
Sbjct: 204 FSWAFGVKWSASGNTLAYAGHNSMIYFVDEVGPSPLAQSVAFRDLPLRDILFVSERMVIG 263

Query: 241 VGYDCNPMVFAADERGIWSFIRFLGERKATSGSNYGSQFSEAFGKLYGQPKHGVGNDSVE 300
           VG+DC+PM FAADERGIWSF+RFLGE+K  SGS YGSQFSEAFGKLYGQP+ GVGNDSVE
Sbjct: 264 VGFDCHPMAFAADERGIWSFVRFLGEKKTASGSKYGSQFSEAFGKLYGQPRQGVGNDSVE 323

Query: 301 SSRLRGCVHENCINCIVPLREP--KASTIKRFSTSGLDGKVVIWDLEGQGDLSQYL 355
           SSRLRGCVHENCINCIVPL+EP  + STIKRFSTSGLDGKVVIWDLEGQ DLSQYL
Sbjct: 324 SSRLRGCVHENCINCIVPLKEPGGRGSTIKRFSTSGLDGKVVIWDLEGQDDLSQYL 379

[Close]

BLAST of MS006384 vs. ExPASy TrEMBL
Match: A0A5A7V268 (Actin-related protein 2/3 complex subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75860G00110 PE=3 SV=1)

HSP 1 Score: 698.4 bits (1801), Expect = 1.6e-197
Identity = 332/367 (90.46%), Postives = 342/367 (93.19%), Query Frame = 0


Query: 1   VVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGIDWSVRSNKIVTASHDRNSYVWNL 60
           +VAFCPNNNEVHIYKSLQDNWERVHVLQKHDQ+ISGIDWSVRSN+IVTASHDRNSYVWNL
Sbjct: 27  LVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQLISGIDWSVRSNRIVTASHDRNSYVWNL 86

Query: 61  EKSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH 120
           E SEWVPTLVILRLNRAALCV+WSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH
Sbjct: 87  EGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH 146

Query: 121 DSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDKKDSKAGAFSDSKFGELIVQLDLS 180
           DSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVD KDS+AG FSDSKFGELIVQLDLS
Sbjct: 147 DSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDTKDSRAGTFSDSKFGELIVQLDLS 206

Query: 181 FSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNVPFRDLPLRDILFVSERMVIG 240
           FSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNV FRDLPLRDILFVSERMVIG
Sbjct: 207 FSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNVAFRDLPLRDILFVSERMVIG 266

Query: 241 VGYDCNPMVFAADERGIWSFIRFLGERKATSGSNYGSQFSEAFGKLYGQPKHGVGNDSVE 300
           VG+DC+PM FAADERGIWSF+RFLGERK  SGS YGSQFSEAFGKLYGQP+ GVGNDSVE
Sbjct: 267 VGFDCHPMAFAADERGIWSFVRFLGERKTASGSKYGSQFSEAFGKLYGQPRQGVGNDSVE 326

Query: 301 SSRLRGCVHENCINCIVPLREPKASTIKRFSTS-------------GLDGKVVIWDLEGQ 355
           SSRLRGCVHENCINCIVPL+EP  STIKRFSTS             GLDGKVVIWDLEGQ
Sbjct: 327 SSRLRGCVHENCINCIVPLKEPGVSTIKRFSTSDCFLLKPTCPDLTGLDGKVVIWDLEGQ 386

[Close]

BLAST of MS006384 vs. TAIR 10
Match: AT2G30910.1 (actin-related protein C1A )

HSP 1 Score: 579.3 bits (1492), Expect = 2.1e-165
Identity = 275/348 (79.02%), Postives = 311/348 (89.37%), Query Frame = 0


Query: 1   VVAFCPNNNEVHIYKSL-QDNWERVHVLQKHDQIISGIDWSVRSNKIVTASHDRNSYVWN 60
           +VA CPNN EVHIYKSL QD+WER+HVLQKHDQI+SGIDWS +SNKIVT SHDRNSYVW+
Sbjct: 24  MVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSGIDWSSKSNKIVTVSHDRNSYVWS 83

Query: 61  LEKSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKR 120
           LE +EWVPTLVILRLNRAALCV+WSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKR
Sbjct: 84  LEGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKR 143

Query: 121 HDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDKKDSKAGAFSDSKFGELIVQLDL 180
           H+SSVT+VAWHPNN+LLATTSTDGKCR+FSTFIKGVD KDSKAG+ +++KFGE I+QLDL
Sbjct: 144 HESSVTSVAWHPNNVLLATTSTDGKCRVFSTFIKGVDTKDSKAGSPAETKFGEQILQLDL 203

Query: 181 SFSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNVPFRDLPLRDILFVSERMVI 240
           S+SWAFGVKWSPSGNTLAY GH+SMIYFVD+VGPSPLAQ+V FRDLPLRD+LF+SE+MVI
Sbjct: 204 SYSWAFGVKWSPSGNTLAYVGHSSMIYFVDDVGPSPLAQSVAFRDLPLRDVLFISEKMVI 263

Query: 241 GVGYDCNPMVFAADERGIWSFIRFLGERK-ATSGSNYGSQFSEAFGKLYG-QPKHGVGND 300
           GVGYD NPMVFA+D+ GIWSFIR++GE+K A+S S+Y SQFSEAFGK YG Q K    ND
Sbjct: 264 GVGYDSNPMVFASDDTGIWSFIRYIGEKKAASSNSSYSSQFSEAFGKFYGSQSKSTTAND 323

Query: 301 SVESSRLRGCVHENCINCIVPLREPKASTIKRFSTSGLDGKVVIWDLE 346
           + ES   RG VH+NCIN IV L +  +  + RFSTSGLDGKV IWDLE
Sbjct: 324 ASES---RGGVHDNCINSIVSLSKAGSPKVMRFSTSGLDGKVAIWDLE 368

[Close]

BLAST of MS006384 vs. TAIR 10
Match: AT2G30910.3 (actin-related protein C1A )

HSP 1 Score: 579.3 bits (1492), Expect = 2.1e-165
Identity = 275/348 (79.02%), Postives = 311/348 (89.37%), Query Frame = 0


Query: 1   VVAFCPNNNEVHIYKSL-QDNWERVHVLQKHDQIISGIDWSVRSNKIVTASHDRNSYVWN 60
           +VA CPNN EVHIYKSL QD+WER+HVLQKHDQI+SGIDWS +SNKIVT SHDRNSYVW+
Sbjct: 24  MVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSGIDWSSKSNKIVTVSHDRNSYVWS 83

Query: 61  LEKSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKR 120
           LE +EWVPTLVILRLNRAALCV+WSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKR
Sbjct: 84  LEGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKR 143

Query: 121 HDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDKKDSKAGAFSDSKFGELIVQLDL 180
           H+SSVT+VAWHPNN+LLATTSTDGKCR+FSTFIKGVD KDSKAG+ +++KFGE I+QLDL
Sbjct: 144 HESSVTSVAWHPNNVLLATTSTDGKCRVFSTFIKGVDTKDSKAGSPAETKFGEQILQLDL 203

Query: 181 SFSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNVPFRDLPLRDILFVSERMVI 240
           S+SWAFGVKWSPSGNTLAY GH+SMIYFVD+VGPSPLAQ+V FRDLPLRD+LF+SE+MVI
Sbjct: 204 SYSWAFGVKWSPSGNTLAYVGHSSMIYFVDDVGPSPLAQSVAFRDLPLRDVLFISEKMVI 263

Query: 241 GVGYDCNPMVFAADERGIWSFIRFLGERK-ATSGSNYGSQFSEAFGKLYG-QPKHGVGND 300
           GVGYD NPMVFA+D+ GIWSFIR++GE+K A+S S+Y SQFSEAFGK YG Q K    ND
Sbjct: 264 GVGYDSNPMVFASDDTGIWSFIRYIGEKKAASSNSSYSSQFSEAFGKFYGSQSKSTTAND 323

Query: 301 SVESSRLRGCVHENCINCIVPLREPKASTIKRFSTSGLDGKVVIWDLE 346
           + ES   RG VH+NCIN IV L +  +  + RFSTSGLDGKV IWDLE
Sbjct: 324 ASES---RGGVHDNCINSIVSLSKAGSPKVMRFSTSGLDGKVAIWDLE 368

[Close]

BLAST of MS006384 vs. TAIR 10
Match: AT2G31300.1 (actin-related protein C1B )

HSP 1 Score: 577.4 bits (1487), Expect = 7.9e-165
Identity = 274/348 (78.74%), Postives = 311/348 (89.37%), Query Frame = 0


Query: 1   VVAFCPNNNEVHIYKSL-QDNWERVHVLQKHDQIISGIDWSVRSNKIVTASHDRNSYVWN 60
           +VA CPNN EVHIYKSL QD+WER+HVLQKHDQI+SGIDWS +SNKIVT SHDRNSYVW+
Sbjct: 24  MVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSGIDWSSKSNKIVTVSHDRNSYVWS 83

Query: 61  LEKSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKR 120
           LE +EWVPTLVILRLNRAALCV+WSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKR
Sbjct: 84  LEGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKR 143

Query: 121 HDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDKKDSKAGAFSDSKFGELIVQLDL 180
           H+SSVT+VAWHPNN+LLATTSTDGKCR+FSTFIKGVD KDSKAG+ +++KFGE I+QLDL
Sbjct: 144 HESSVTSVAWHPNNVLLATTSTDGKCRVFSTFIKGVDTKDSKAGSPAETKFGEQILQLDL 203

Query: 181 SFSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNVPFRDLPLRDILFVSERMVI 240
           S+SWAFGVKWSPSGNTLAY GH+SMIYFVD+VGPSPLAQ+V FRDLPLRD+LF+SE+MVI
Sbjct: 204 SYSWAFGVKWSPSGNTLAYVGHSSMIYFVDDVGPSPLAQSVAFRDLPLRDVLFISEKMVI 263

Query: 241 GVGYDCNPMVFAADERGIWSFIRFLGERK-ATSGSNYGSQFSEAFGKLYG-QPKHGVGND 300
           GVGYD NPMVFAAD+ GIWSFIR++GE+K A+SGS+Y SQFSEAFGK YG Q K    ND
Sbjct: 264 GVGYDSNPMVFAADDTGIWSFIRYIGEKKAASSGSSYSSQFSEAFGKFYGSQSKSTTAND 323

Query: 301 SVESSRLRGCVHENCINCIVPLREPKASTIKRFSTSGLDGKVVIWDLE 346
           + +S   RG VH+N I  IVPL +  +  + RFSTSGLDGK+ IWDLE
Sbjct: 324 ASDS---RGGVHDNSITSIVPLGKGGSPKVMRFSTSGLDGKIAIWDLE 368

[Close]

BLAST of MS006384 vs. TAIR 10
Match: AT2G30910.2 (actin-related protein C1A )

HSP 1 Score: 555.1 bits (1429), Expect = 4.2e-158
Identity = 270/350 (77.14%), Postives = 304/350 (86.86%), Query Frame = 0


Query: 1   VVAFCPNNNEVHIYKSL-QDNWERVHVLQKHDQIISGIDWSVRSNKIVTASHDRNSYVWN 60
           +VA CPNN EVHIYKSL QD+WER+HVLQKHDQI+SGIDWS +SNKIVT SHDRNSYVW+
Sbjct: 24  MVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSGIDWSSKSNKIVTVSHDRNSYVWS 83

Query: 61  LEKSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKR 120
           LE +EWVPTLVILRLNRAALCV+WSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKR
Sbjct: 84  LEGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKR 143

Query: 121 HDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDKKDSK--AGAFSDSKFGELIVQL 180
           H+SSVT+VAWHPNN+LLATTSTDGKCR+FSTFIKGVD K +    GAF   K  + I+QL
Sbjct: 144 HESSVTSVAWHPNNVLLATTSTDGKCRVFSTFIKGVDTKYAHYLNGAFFLLK--QQILQL 203

Query: 181 DLSFSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNVPFRDLPLRDILFVSERM 240
           DLS+SWAFGVKWSPSGNTLAY GH+SMIYFVD+VGPSPLAQ+V FRDLPLRD+LF+SE+M
Sbjct: 204 DLSYSWAFGVKWSPSGNTLAYVGHSSMIYFVDDVGPSPLAQSVAFRDLPLRDVLFISEKM 263

Query: 241 VIGVGYDCNPMVFAADERGIWSFIRFLGERK-ATSGSNYGSQFSEAFGKLYG-QPKHGVG 300
           VIGVGYD NPMVFA+D+ GIWSFIR++GE+K A+S S+Y SQFSEAFGK YG Q K    
Sbjct: 264 VIGVGYDSNPMVFASDDTGIWSFIRYIGEKKAASSNSSYSSQFSEAFGKFYGSQSKSTTA 323

Query: 301 NDSVESSRLRGCVHENCINCIVPLREPKASTIKRFSTSGLDGKVVIWDLE 346
           ND+ ES   RG VH+NCIN IV L +  +  + RFSTSGLDGKV IWDLE
Sbjct: 324 NDASES---RGGVHDNCINSIVSLSKAGSPKVMRFSTSGLDGKVAIWDLE 368

[Close]

BLAST of MS006384 vs. TAIR 10
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 53.9 bits (128), Expect = 3.0e-07
Identity = 38/133 (28.57%), Postives = 63/133 (47.37%), Query Frame = 0


Query: 22  ERVHVLQKHDQIISGIDWSVRSNKIVTASHDRNSYVWNLEKSEWVPTLVILRLNRAALCV 81
           E V     H+  IS + +S  +  IV+AS D+   +W++E    + TL+       A CV
Sbjct: 62  EPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLI--GHTNYAFCV 121

Query: 82  RWSPKENKFAVGSGAKTVCICYYEQENNWWVSK----LIRKRHDSSVTNVAWHPNNLLLA 141
            ++P+ N    GS  +TV I        W V+      +   H   VT V ++ +  L+ 
Sbjct: 122 NFNPQSNMIVSGSFDETVRI--------WDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIV 181

Query: 142 TTSTDGKCRIFST 151
           ++S DG CRI+ +
Sbjct: 182 SSSYDGLCRIWDS 184

The following BLAST results are available for this feature:

BLAST of MS006384 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148037.1	6.8e-211	99.44	actin-related protein 2/3 complex subunit 1A-like [Momordica charantia]	[more]
XP_008449504.1	5.4e-200	93.79	PREDICTED: actin-related protein 2/3 complex subunit 1A-like [Cucumis melo]	[more]
XP_023553744.1	1.0e-198	93.79	actin-related protein 2/3 complex subunit 1B-like isoform X1 [Cucurbita pepo sub...	[more]
XP_038886984.1	1.7e-198	93.79	actin-related protein 2/3 complex subunit 1A-like [Benincasa hispida]	[more]
XP_022952913.1	8.6e-198	93.50	actin-related protein 2/3 complex subunit 1B isoform X1 [Cucurbita moschata] >KA...	[more]

BLAST of MS006384 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80856	2.9e-164	79.02	Actin-related protein 2/3 complex subunit 1A OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9SJW6	1.1e-163	78.74	Actin-related protein 2/3 complex subunit 1B OS=Arabidopsis thaliana OX=3702 GN=...	[more]
O96622	1.3e-84	44.19	Actin-related protein 2/3 complex subunit 1 OS=Dictyostelium discoideum OX=44689...	[more]
Q7ZXD5	1.6e-74	42.32	Actin-related protein 2/3 complex subunit 1B-A OS=Xenopus laevis OX=8355 GN=arpc...	[more]
Q6GNU1	3.6e-74	42.32	Actin-related protein 2/3 complex subunit 1B-B OS=Xenopus laevis OX=8355 GN=arpc...	[more]

BLAST of MS006384 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D3Z7	3.3e-211	99.44	Actin-related protein 2/3 complex subunit OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A1S3BM68	2.6e-200	93.79	Actin-related protein 2/3 complex subunit OS=Cucumis melo OX=3656 GN=LOC10349137...	[more]
A0A6J1GLX8	4.2e-198	93.50	Actin-related protein 2/3 complex subunit OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A0A0KHX9	9.3e-198	92.70	Actin-related protein 2/3 complex subunit OS=Cucumis sativus OX=3659 GN=Csa_6G42...	[more]
A0A5A7V268	1.6e-197	90.46	Actin-related protein 2/3 complex subunit OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of MS006384 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30910.1	2.1e-165	79.02	actin-related protein C1A	[more]
AT2G30910.3	2.1e-165	79.02	actin-related protein C1A	[more]
AT2G31300.1	7.9e-165	78.74	actin-related protein C1B	[more]
AT2G30910.2	4.2e-158	77.14	actin-related protein C1A	[more]
AT3G49660.1	3.0e-07	28.57	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 109..149 e-value: 3.7E-5 score: 33.2 coord: 20..59 e-value: 2.3E-4 score: 30.5 coord: 64..103 e-value: 7.4 score: 11.5 coord: 297..343 e-value: 69.0 score: 5.4 coord: 170..209 e-value: 4.3 score: 13.0
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 22..59 e-value: 0.09 score: 13.7
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 117..149 score: 9.639578
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 27..68 score: 11.510997
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 1..344 e-value: 8.6E-129 score: 431.5
IPR017383	Actin-related protein 2/3 complex subunit 1	PIRSF	PIRSF038093	ARPC1	coord: 1..348 e-value: 8.6E-137 score: 453.9
IPR017383	Actin-related protein 2/3 complex subunit 1	PANTHER	PTHR10709	ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 1	coord: 1..344
IPR024977	Anaphase-promoting complex subunit 4, WD40 domain	PFAM	PF12894	ANAPC4_WD40	coord: 82..149 e-value: 2.2E-5 score: 24.7
None	No IPR available	PANTHER	PTHR10709:SF2	ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT	coord: 1..344
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 27..64 score: 9.151057
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 46..60
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 2..350

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS006384.1	MS006384.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034314	Arp2/3 complex-mediated actin nucleation
biological_process	GO:0030833	regulation of actin filament polymerization
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005885	Arp2/3 protein complex
molecular_function	GO:0005515	protein binding