MS006376 (gene) Bitter gourd (TR) v1

Overview


Name	MS006376
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein Mpv17
Location	scaffold327: 201597 .. 203398 (-)
RNA-Seq Expression	MS006376
Synteny	MS006376

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTTATTGGGCGGCGGAAGCCATGGCGGCCTCTGGGGCTGGAACTTCCTGCTTCCCGATCCTAAAACTTCTCGAAACAAGAGGAGAAGATTTGAACCCAAATCATCTAATTCCTTGGAGGCAACTCCTGGATCTGGTTTCCGTTTCCCCCTTAAGCAGTCCTTGATTGCCGGCTGTCTCTCTCTCTCGGGCGACACTATTGCACAGTTTATAGGCCGGTGGCGTAAAGGAATCGCTCTCAATTCCACTTCTCTCTCTAATTCTGCCTCTCTCAATAGGGTAATTTACTGTTTTCCAGTGATTTTGAAATTCGAATTGTACTAAAATCGGTGGCTTAGGGTATGAACTTTCTTTATTCATGTTTCCTTTTGTGCATGTCTGAGTTTTCGGGCCCAGCACTATCGATGTTACCTGTTGTCTTTTCAATTCGGTGTTTGAACTTGAACCTGGCAATTCTTTTGGACGGAAATTATTGAATGGTTCATTCTGTCATAGCAAAACTGTGGCTTGGAAACAATTCTTATCTTTTACTCCGTGTACAGTAGTTAATTTTTCTAGGACAGTTGTTCTGTGCATGCCGGATCATCCGCTTCTAGTCTACTGTGCTTCTTTTTGGAACCTCATTGATGCGTTTTTATGGGTGTCTTTAACTAATTTCGTGACCAAAACTCTTCTTTCAGGATGGTTTTTCAAACATATTTTCGGAACATGATTGGATTCGCGCTTTGCGAATGCTTTCTTATGGGTTTCTGTTGTATGGTCCGGGATCCTTTGCATGGTACAACTATCTTGATCATGCTTTGCCCAAGAGATCGGTGGAGAATCTTATGCTGAAGGTACAGCTGATTGTGGCTTTTGTGTTAATTATTCTTTTAATATACACTTAAGCTCAGCTCATAGCGGCTCGAGATAAGCAGTAACCGTATACAAGCACAGTTCCATGTACATTCTTCTTAATTGATTGTTTTTCAGGTTCTCCTAAATCAAGTTGTTCTTGGTCCATGCGTTATTGCTGTTGTATTTGCATGGAACAATATATGGCTTGGAAAAATCTCCCAGCTTCCTGACAAGTATCGGAAAGATGCTCTTCCTACACTATTATATGGTAAAAACGTCTCTGACTAGGGCATTTTGTTGCTCAAGGACACAAGTCTAATGAAATCACTTTTTGATCTCTTTGCAGGGTTTAGGTTCTGGATTCCTGTCAGCATATTGAACTTTTGGTAATTTTTCACATTTAGTTACCCCACGATCCCAGCAGGTTCCCTTTTCGTTACTCAAGCTACACTCGAAAGAGCAATTGAACAACATTTGAAACCACATAAGATGTATTTTGGAACAGGGCCTTTAGTAGTTAACCTGTAGTTGATGAGCTAAAACACAATATCAGCTTTTTAAGTTTTAGATAGATAAGATATCACAATTAACACATGCTTAACTTCTGATCTTTCTTTTTGTATTGCATTTTCCGACATGACGGTTAAGTAGGTTTCAGAAATCTTTGAACCACAATATTTTATCTGATCTCTTTTCTATGAGGCCAAATGAATTTTTGCTATATGTTCTATACGCATGAAGCCTTAAACTTAAGATTTTGGCAGTCAGCCTTCTCCTCTTTATATAACACTGGCAACCATATATTCATGTTCTAAATCTGTGATTGGTAACCAAGGACATTACGTTGAATTTGACTCAACCATGTGTGGCATAACAGGGCTGTGCCCCTCCAAGCTCGGGTGCCTTTTATGTCTGTGGCCTCTATATTTTGGAACTTCTATTTGTCTTCAACCATGAGTAAG

mRNA sequence

ATGGACTTATTGGGCGGCGGAAGCCATGGCGGCCTCTGGGGCTGGAACTTCCTGCTTCCCGATCCTAAAACTTCTCGAAACAAGAGGAGAAGATTTGAACCCAAATCATCTAATTCCTTGGAGGCAACTCCTGGATCTGGTTTCCGTTTCCCCCTTAAGCAGTCCTTGATTGCCGGCTGTCTCTCTCTCTCGGGCGACACTATTGCACAGTTTATAGGCCGGTGGCGTAAAGGAATCGCTCTCAATTCCACTTCTCTCTCTAATTCTGCCTCTCTCAATAGGGATGGTTTTTCAAACATATTTTCGGAACATGATTGGATTCGCGCTTTGCGAATGCTTTCTTATGGGTTTCTGTTGTATGGTCCGGGATCCTTTGCATGGTACAACTATCTTGATCATGCTTTGCCCAAGAGATCGGTGGAGAATCTTATGCTGAAGGTTCTCCTAAATCAAGTTGTTCTTGGTCCATGCGTTATTGCTGTTGTATTTGCATGGAACAATATATGGCTTGGAAAAATCTCCCAGCTTCCTGACAAGTATCGGAAAGATGCTCTTCCTACACTATTATATGGGTTTAGGTTCTGGATTCCTGTCAGCATATTGAACTTTTGGGCTGTGCCCCTCCAAGCTCGGGTGCCTTTTATGTCTGTGGCCTCTATATTTTGGAACTTCTATTTGTCTTCAACCATGAGTAAG

Coding sequence (CDS)

ATGGACTTATTGGGCGGCGGAAGCCATGGCGGCCTCTGGGGCTGGAACTTCCTGCTTCCCGATCCTAAAACTTCTCGAAACAAGAGGAGAAGATTTGAACCCAAATCATCTAATTCCTTGGAGGCAACTCCTGGATCTGGTTTCCGTTTCCCCCTTAAGCAGTCCTTGATTGCCGGCTGTCTCTCTCTCTCGGGCGACACTATTGCACAGTTTATAGGCCGGTGGCGTAAAGGAATCGCTCTCAATTCCACTTCTCTCTCTAATTCTGCCTCTCTCAATAGGGATGGTTTTTCAAACATATTTTCGGAACATGATTGGATTCGCGCTTTGCGAATGCTTTCTTATGGGTTTCTGTTGTATGGTCCGGGATCCTTTGCATGGTACAACTATCTTGATCATGCTTTGCCCAAGAGATCGGTGGAGAATCTTATGCTGAAGGTTCTCCTAAATCAAGTTGTTCTTGGTCCATGCGTTATTGCTGTTGTATTTGCATGGAACAATATATGGCTTGGAAAAATCTCCCAGCTTCCTGACAAGTATCGGAAAGATGCTCTTCCTACACTATTATATGGGTTTAGGTTCTGGATTCCTGTCAGCATATTGAACTTTTGGGCTGTGCCCCTCCAAGCTCGGGTGCCTTTTATGTCTGTGGCCTCTATATTTTGGAACTTCTATTTGTCTTCAACCATGAGTAAG

Protein sequence

MDLLGGGSHGGLWGWNFLLPDPKTSRNKRRRFEPKSSNSLEATPGSGFRFPLKQSLIAGCLSLSGDTIAQFIGRWRKGIALNSTSLSNSASLNRDGFSNIFSEHDWIRALRMLSYGFLLYGPGSFAWYNYLDHALPKRSVENLMLKVLLNQVVLGPCVIAVVFAWNNIWLGKISQLPDKYRKDALPTLLYGFRFWIPVSILNFWAVPLQARVPFMSVASIFWNFYLSSTMSK

Homology

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BLAST of MS006376 vs. NCBI nr
Match: XP_022147925.1 (protein Mpv17 [Momordica charantia])

HSP 1 Score: 477.6 bits (1228), Expect = 6.0e-131
Identity = 230/232 (99.14%), Postives = 231/232 (99.57%), Query Frame = 0


Query: 1   MDLLGGGSHGGLWGWNFLLPDPKTSRNKRRRFEPKSSNSLEATPGSGFRFPLKQSLIAGC 60
           MDLLGGGSHGGLWGWNFLLPDPKTSRNKRRRFEPKSSNSLEATPGSGFRFPLKQSLIAGC
Sbjct: 1   MDLLGGGSHGGLWGWNFLLPDPKTSRNKRRRFEPKSSNSLEATPGSGFRFPLKQSLIAGC 60

Query: 61  LSLSGDTIAQFIGRWRKGIALNSTSLSNSASLNRDGFSNIFSEHDWIRALRMLSYGFLLY 120
           LSLSGDTIAQFIGRWRKGIALNSTSLSNSASL+RDGFSNIFSEHDWIRALRMLSYGFLLY
Sbjct: 61  LSLSGDTIAQFIGRWRKGIALNSTSLSNSASLSRDGFSNIFSEHDWIRALRMLSYGFLLY 120

Query: 121 GPGSFAWYNYLDHALPKRSVENLMLKVLLNQVVLGPCVIAVVFAWNNIWLGKISQLPDKY 180
           GPGSFAWYNYLDHALPKRSVENLMLKVLLNQVVLGPCVIAVVFAWNNIWLGKISQLPDKY
Sbjct: 121 GPGSFAWYNYLDHALPKRSVENLMLKVLLNQVVLGPCVIAVVFAWNNIWLGKISQLPDKY 180

Query: 181 RKDALPTLLYGFRFWIPVSILNFWAVPLQARVPFMSVASIFWNFYLSSTMSK 233
           RKDALPTLLYGFRFWIPV ILNFWAVPLQARVPFMSVASIFWNFYLSSTMSK
Sbjct: 181 RKDALPTLLYGFRFWIPVXILNFWAVPLQARVPFMSVASIFWNFYLSSTMSK 232

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BLAST of MS006376 vs. NCBI nr
Match: KAG6589283.1 (Protein Mpv17, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022979.1 Protein Mpv17 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 401.7 bits (1031), Expect = 4.2e-108
Identity = 194/232 (83.62%), Postives = 206/232 (88.79%), Query Frame = 0


Query: 1   MDLLGGGSHGGLWGWNFLLPDPKTSRNKRRRFEPKSSNSLEATPGSGFRFPLKQSLIAGC 60
           MDLLGGG HGGLWGWNF LPD  TSRNKRR FE KSSNSL+AT GSG++FPLKQSL AGC
Sbjct: 1   MDLLGGG-HGGLWGWNFFLPDSNTSRNKRRSFEAKSSNSLQATGGSGYQFPLKQSLTAGC 60

Query: 61  LSLSGDTIAQFIGRWRKGIALNSTSLSNSASLNRDGFSNIFSEHDWIRALRMLSYGFLLY 120
           L+LSGDTIAQ +GRWRK IAL      NS+SL +DG SNIFSEHDWIR+LRMLSYG L+Y
Sbjct: 61  LTLSGDTIAQLVGRWRKEIAL------NSSSLEKDGVSNIFSEHDWIRSLRMLSYGILIY 120

Query: 121 GPGSFAWYNYLDHALPKRSVENLMLKVLLNQVVLGPCVIAVVFAWNNIWLGKISQLPDKY 180
           GPGSFAWYNYLDH +PK+SVENLMLKVLLNQ+VLGPCVI  VFAWNNIWLGKISQLP  Y
Sbjct: 121 GPGSFAWYNYLDHVMPKQSVENLMLKVLLNQIVLGPCVIGAVFAWNNIWLGKISQLPAMY 180

Query: 181 RKDALPTLLYGFRFWIPVSILNFWAVPLQARVPFMSVASIFWNFYLSSTMSK 233
           RKDALPTLLYGFRFWIPVSILNFW VPLQARV FMSVASIFWNFYLSSTMSK
Sbjct: 181 RKDALPTLLYGFRFWIPVSILNFWVVPLQARVAFMSVASIFWNFYLSSTMSK 225

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BLAST of MS006376 vs. NCBI nr
Match: XP_022930888.1 (protein Mpv17 isoform X1 [Cucurbita moschata] >XP_023529297.1 protein Mpv17 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 399.1 bits (1024), Expect = 2.7e-107
Identity = 193/232 (83.19%), Postives = 205/232 (88.36%), Query Frame = 0


Query: 1   MDLLGGGSHGGLWGWNFLLPDPKTSRNKRRRFEPKSSNSLEATPGSGFRFPLKQSLIAGC 60
           MDLLGGG HGGLWGWNF LPD  TSRNKRR FE KSSNSL+AT GSG++FPLKQSL AGC
Sbjct: 1   MDLLGGG-HGGLWGWNFFLPDSNTSRNKRRSFEAKSSNSLQATGGSGYQFPLKQSLTAGC 60

Query: 61  LSLSGDTIAQFIGRWRKGIALNSTSLSNSASLNRDGFSNIFSEHDWIRALRMLSYGFLLY 120
           L+LSGDTIAQ +GRWRK IAL      NS+SL +DG SNIFSEHDWIR+LRMLSYG L+Y
Sbjct: 61  LTLSGDTIAQLVGRWRKEIAL------NSSSLEKDGVSNIFSEHDWIRSLRMLSYGILIY 120

Query: 121 GPGSFAWYNYLDHALPKRSVENLMLKVLLNQVVLGPCVIAVVFAWNNIWLGKISQLPDKY 180
           GPGSFAWYNYLDH +PK+SV NLMLKVLLNQ+VLGPCVI  VFAWNNIWLGKISQLP  Y
Sbjct: 121 GPGSFAWYNYLDHVMPKQSVGNLMLKVLLNQIVLGPCVIGAVFAWNNIWLGKISQLPAMY 180

Query: 181 RKDALPTLLYGFRFWIPVSILNFWAVPLQARVPFMSVASIFWNFYLSSTMSK 233
           RKDALPTLLYGFRFWIPVSILNFW VPLQARV FMSVASIFWNFYLSSTMSK
Sbjct: 181 RKDALPTLLYGFRFWIPVSILNFWVVPLQARVAFMSVASIFWNFYLSSTMSK 225

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BLAST of MS006376 vs. NCBI nr
Match: XP_038887313.1 (protein SYM1 [Benincasa hispida])

HSP 1 Score: 393.7 bits (1010), Expect = 1.1e-105
Identity = 191/232 (82.33%), Postives = 207/232 (89.22%), Query Frame = 0


Query: 1   MDLLGGGSHGGLWGWNFLLPDPKTSRNKRRRFEPKSSNSLEATPGSGFRFPLKQSLIAGC 60
           MD+LGGG +GGLWGWNFLLPD KTSRNKRRRF+PK SNSL+AT GSGFR PLKQ L AGC
Sbjct: 1   MDVLGGG-NGGLWGWNFLLPDSKTSRNKRRRFDPKCSNSLQATGGSGFRLPLKQYLTAGC 60

Query: 61  LSLSGDTIAQFIGRWRKGIALNSTSLSNSASLNRDGFSNIFSEHDWIRALRMLSYGFLLY 120
           L+LSGDTIAQFI RWR+GIALNSTSLS+S S ++    NIFSEHDWIR+LRM SYGFLLY
Sbjct: 61  LTLSGDTIAQFISRWREGIALNSTSLSDSDSAHK---MNIFSEHDWIRSLRMASYGFLLY 120

Query: 121 GPGSFAWYNYLDHALPKRSVENLMLKVLLNQVVLGPCVIAVVFAWNNIWLGKISQLPDKY 180
           GPGSFAWY YLDH LPK+SVENL+LKV+LNQ+VLGP VI VVFAWN++WLGKISQLPD Y
Sbjct: 121 GPGSFAWYGYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLGKISQLPDMY 180

Query: 181 RKDALPTLLYGFRFWIPVSILNFWAVPLQARVPFMSVASIFWNFYLSSTMSK 233
           RKDALPTL YG RFWIPVSILNFW VPLQ RV FMSVASIFWNFYLSSTMSK
Sbjct: 181 RKDALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK 228

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BLAST of MS006376 vs. NCBI nr
Match: XP_022989118.1 (protein Mpv17 [Cucurbita maxima])

HSP 1 Score: 393.3 bits (1009), Expect = 1.5e-105
Identity = 190/232 (81.90%), Postives = 203/232 (87.50%), Query Frame = 0


Query: 1   MDLLGGGSHGGLWGWNFLLPDPKTSRNKRRRFEPKSSNSLEATPGSGFRFPLKQSLIAGC 60
           M LLGGG HGGLWGWNF LPD  TSRN RR FE KSSNSL+AT GSG++FPLKQSL AGC
Sbjct: 1   MHLLGGG-HGGLWGWNFFLPDSNTSRNNRRSFEAKSSNSLQATGGSGYQFPLKQSLTAGC 60

Query: 61  LSLSGDTIAQFIGRWRKGIALNSTSLSNSASLNRDGFSNIFSEHDWIRALRMLSYGFLLY 120
           L+LSGDTIAQ +GRWRK IAL      NS+SL +DG SNIFSEHDWIR+LRMLSYG L+Y
Sbjct: 61  LTLSGDTIAQLVGRWRKEIAL------NSSSLEKDGVSNIFSEHDWIRSLRMLSYGILIY 120

Query: 121 GPGSFAWYNYLDHALPKRSVENLMLKVLLNQVVLGPCVIAVVFAWNNIWLGKISQLPDKY 180
           GPGSFAWYNYLDH +PK+SV NLMLKVLLNQ+VLGPCVI  VFAWNNIWLGKI+QLP  Y
Sbjct: 121 GPGSFAWYNYLDHVMPKQSVGNLMLKVLLNQIVLGPCVIGAVFAWNNIWLGKINQLPAMY 180

Query: 181 RKDALPTLLYGFRFWIPVSILNFWAVPLQARVPFMSVASIFWNFYLSSTMSK 233
           RKDALPTLLYGFRFWIPVSILNFW VPLQARV FMSVASIFWNFYLSSTMSK
Sbjct: 181 RKDALPTLLYGFRFWIPVSILNFWVVPLQARVAFMSVASIFWNFYLSSTMSK 225

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BLAST of MS006376 vs. ExPASy Swiss-Prot
Match: Q4P9K6 (Protein SYM1 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=SYM1 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.8e-13
Identity = 56/180 (31.11%), Postives = 77/180 (42.78%), Query Frame = 0


Query: 50  FPLKQSLIAGCLSLSGDTIAQFIGRWRKGIALNSTSLSNSASLNRDGFSNIFSEHDWIRA 109
           FP +Q L  G L  +GDTIAQ +   R                         S HD  R 
Sbjct: 15  FP-RQCLTGGVLFATGDTIAQQLVEKRG------------------------SRHDLART 74

Query: 110 LRMLSYGFLLYGPGSFAWY-NYLDHALPKRSVENLMLKVLLNQVVLGPCVIAVVFAWNNI 169
            R+  YG  ++ P +  W+   L+         N+  KV L+Q +  P  +A+ F    I
Sbjct: 75  FRLSLYGGCVFSPLASIWFGRVLERVRFSSKAANIATKVALDQAIASPAFVALFFGATTI 134

Query: 170 WL-GKISQLPDKYRKDALPTLLYGFRFWIPVSILNFWAVPLQARVPFMSVASIFWNFYLS 228
              G   Q  +K   +  PTL   +  WIPV  LN   VP   R+ F++V SIFWN +LS
Sbjct: 135 MEGGSPDQAKNKIIHNWWPTLKTAWGLWIPVQTLNMALVPPSQRLLFVNVVSIFWNTFLS 169

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BLAST of MS006376 vs. ExPASy Swiss-Prot
Match: Q9NR77 (Peroxisomal membrane protein 2 OS=Homo sapiens OX=9606 GN=PXMP2 PE=1 SV=3)

HSP 1 Score: 75.5 bits (184), Expect = 8.9e-13
Identity = 55/178 (30.90%), Postives = 84/178 (47.19%), Query Frame = 0


Query: 52  LKQSLIAGCLSLSGDTIAQFIGRWRKGIALNSTSLSNSASLNRDGFSNIFSEHDWIRALR 111
           L ++  +G LS  G+ +AQ I + RK          NS SL+  G             LR
Sbjct: 35  LTKAATSGILSALGNFLAQMIEKKRK--------KENSRSLDVGG------------PLR 94

Query: 112 MLSYGFLLYGPGSFAWYNYLDHALPKRSVENLMLKVLLNQVVLGPCVIAVVFAWNNIWLG 171
              YGF   GP S  +Y +++H +P       + ++LL+++V  P  + + F   N   G
Sbjct: 95  YAVYGFFFTGPLSHFFYFFMEHWIPPEVPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEG 154

Query: 172 K-ISQLPDKYRKDALPTLLYGFRFWIPVSILNFWAVPLQARVPFMSVASIFWNFYLSS 229
           K  S    K R    P L   +R W P+  +N   VPL+ RV F ++A++FW  YL+S
Sbjct: 155 KDASAFAAKMRGGFWPALRMNWRVWTPLQFININYVPLKFRVLFANLAALFWYAYLAS 192

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BLAST of MS006376 vs. ExPASy Swiss-Prot
Match: Q54FR4 (PXMP2/4 family protein 4 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290631 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.4e-12
Identity = 48/152 (31.58%), Postives = 77/152 (50.66%), Query Frame = 0


Query: 81  LNSTSLSNSASLNRDGFSNIFSEHDWIRALRMLSYGFLLYGPGSFAWYNYLDHALPKRSV 140
           L S SL     L+RD       ++D+ R++RM  +GF + GP    W+ YLD   PK+S 
Sbjct: 36  LISDSLVQGIELSRDK----DKKYDFKRSMRMAVFGFAVTGPLFHYWFKYLDKHFPKKSY 95

Query: 141 ENLMLKVLLNQVVLGPCVIAVVFAWNNIWLGKI-SQLPDKYRKDALPTLLYGFRFWIPVS 200
            +  +K+ ++QVV  P    + F+   I  GK    + +K +KD L T +     W  ++
Sbjct: 96  RHAFIKLTIDQVVCSPVFNFLFFSGMGILEGKSKDDIVEKLKKDWLTTYVSDCVVWPFIN 155

Query: 201 ILNFWAVPLQARVPFMSVASIFWNFYLSSTMS 232
            +NF  +    RV FM+V +I W  +L+   S
Sbjct: 156 FVNFAYISSIHRVTFMNVCNIGWGAFLAKMNS 183

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BLAST of MS006376 vs. ExPASy Swiss-Prot
Match: Q5TZ51 (Protein Mpv17 OS=Danio rerio OX=7955 GN=mpv17 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.7e-11
Identity = 40/142 (28.17%), Postives = 66/142 (46.48%), Query Frame = 0


Query: 92  LNRDGFSNIFSEHDWIRALRMLSYGFLLYGPGSFAWYNYLDHALPKRSVENLMLKVLLNQ 151
           + R G +N    H+  R  +M+S GF   GP    WY  LD  +   +    + K+L++Q
Sbjct: 39  IERRGLAN----HNARRTAKMMSIGFFFVGPVVGGWYKVLDKLVTGGTKSAALKKMLVDQ 98

Query: 152 VVLGPCVIAVVFAWNNIWLG-KISQLPDKYRKDALPTLLYGFRFWIPVSILNFWAVPLQA 211
           V   PC +           G  + +   K ++D    L+  +  W PV I NF+ +PL  
Sbjct: 99  VGFAPCFLGAFLGITGTLNGLTVEENVAKLQRDYTDALISNYYLWPPVQIANFYFIPLHH 158

Query: 212 RVPFMSVASIFWNFYLSSTMSK 233
           R+  + + ++ WN YLS   +K
Sbjct: 159 RLAVVQIVAVVWNSYLSWKANK 176

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BLAST of MS006376 vs. ExPASy Swiss-Prot
Match: Q66GV0 (Protein Mpv17 OS=Xenopus laevis OX=8355 GN=mpv17 PE=2 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 3.8e-11
Identity = 38/130 (29.23%), Postives = 60/130 (46.15%), Query Frame = 0


Query: 104 HDWIRALRMLSYGFLLYGPGSFAWYNYLDHALPKRSVENLMLKVLLNQVVLGPCVIAVVF 163
           H   R ++M+  GF   GP    WY  LD  +P       + K+LL+QV   PC +    
Sbjct: 47  HSIERTVKMMGIGFCFVGPVVGGWYKILDRIIPGSGKPVALKKMLLDQVAFAPCFLGCFL 106

Query: 164 AWNNIWLG-KISQLPDKYRKDALPTLLYGFRFWIPVSILNFWAVPLQARVPFMSVASIFW 223
           +  +   G    Q+  K ++D    L+  +  W  V + NF+ +PL  R+  +   +I W
Sbjct: 107 SIASALNGLSGEQIWGKLKRDYKDALITNYYIWPAVQVANFYFIPLYHRLAVVQFVAIIW 166

Query: 224 NFYLSSTMSK 233
           N YLS   +K
Sbjct: 167 NSYLSWKANK 176

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BLAST of MS006376 vs. ExPASy TrEMBL
Match: A0A6J1D1H6 (protein Mpv17 OS=Momordica charantia OX=3673 GN=LOC111016738 PE=3 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 2.9e-131
Identity = 230/232 (99.14%), Postives = 231/232 (99.57%), Query Frame = 0


Query: 1   MDLLGGGSHGGLWGWNFLLPDPKTSRNKRRRFEPKSSNSLEATPGSGFRFPLKQSLIAGC 60
           MDLLGGGSHGGLWGWNFLLPDPKTSRNKRRRFEPKSSNSLEATPGSGFRFPLKQSLIAGC
Sbjct: 1   MDLLGGGSHGGLWGWNFLLPDPKTSRNKRRRFEPKSSNSLEATPGSGFRFPLKQSLIAGC 60

Query: 61  LSLSGDTIAQFIGRWRKGIALNSTSLSNSASLNRDGFSNIFSEHDWIRALRMLSYGFLLY 120
           LSLSGDTIAQFIGRWRKGIALNSTSLSNSASL+RDGFSNIFSEHDWIRALRMLSYGFLLY
Sbjct: 61  LSLSGDTIAQFIGRWRKGIALNSTSLSNSASLSRDGFSNIFSEHDWIRALRMLSYGFLLY 120

Query: 121 GPGSFAWYNYLDHALPKRSVENLMLKVLLNQVVLGPCVIAVVFAWNNIWLGKISQLPDKY 180
           GPGSFAWYNYLDHALPKRSVENLMLKVLLNQVVLGPCVIAVVFAWNNIWLGKISQLPDKY
Sbjct: 121 GPGSFAWYNYLDHALPKRSVENLMLKVLLNQVVLGPCVIAVVFAWNNIWLGKISQLPDKY 180

Query: 181 RKDALPTLLYGFRFWIPVSILNFWAVPLQARVPFMSVASIFWNFYLSSTMSK 233
           RKDALPTLLYGFRFWIPV ILNFWAVPLQARVPFMSVASIFWNFYLSSTMSK
Sbjct: 181 RKDALPTLLYGFRFWIPVXILNFWAVPLQARVPFMSVASIFWNFYLSSTMSK 232

[Close]

BLAST of MS006376 vs. ExPASy TrEMBL
Match: A0A6J1EWS4 (protein Mpv17 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437238 PE=3 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.3e-107
Identity = 193/232 (83.19%), Postives = 205/232 (88.36%), Query Frame = 0


Query: 1   MDLLGGGSHGGLWGWNFLLPDPKTSRNKRRRFEPKSSNSLEATPGSGFRFPLKQSLIAGC 60
           MDLLGGG HGGLWGWNF LPD  TSRNKRR FE KSSNSL+AT GSG++FPLKQSL AGC
Sbjct: 1   MDLLGGG-HGGLWGWNFFLPDSNTSRNKRRSFEAKSSNSLQATGGSGYQFPLKQSLTAGC 60

Query: 61  LSLSGDTIAQFIGRWRKGIALNSTSLSNSASLNRDGFSNIFSEHDWIRALRMLSYGFLLY 120
           L+LSGDTIAQ +GRWRK IAL      NS+SL +DG SNIFSEHDWIR+LRMLSYG L+Y
Sbjct: 61  LTLSGDTIAQLVGRWRKEIAL------NSSSLEKDGVSNIFSEHDWIRSLRMLSYGILIY 120

Query: 121 GPGSFAWYNYLDHALPKRSVENLMLKVLLNQVVLGPCVIAVVFAWNNIWLGKISQLPDKY 180
           GPGSFAWYNYLDH +PK+SV NLMLKVLLNQ+VLGPCVI  VFAWNNIWLGKISQLP  Y
Sbjct: 121 GPGSFAWYNYLDHVMPKQSVGNLMLKVLLNQIVLGPCVIGAVFAWNNIWLGKISQLPAMY 180

Query: 181 RKDALPTLLYGFRFWIPVSILNFWAVPLQARVPFMSVASIFWNFYLSSTMSK 233
           RKDALPTLLYGFRFWIPVSILNFW VPLQARV FMSVASIFWNFYLSSTMSK
Sbjct: 181 RKDALPTLLYGFRFWIPVSILNFWVVPLQARVAFMSVASIFWNFYLSSTMSK 225

[Close]

BLAST of MS006376 vs. ExPASy TrEMBL
Match: A0A6J1JPB9 (protein Mpv17 OS=Cucurbita maxima OX=3661 GN=LOC111486282 PE=3 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 7.2e-106
Identity = 190/232 (81.90%), Postives = 203/232 (87.50%), Query Frame = 0


Query: 1   MDLLGGGSHGGLWGWNFLLPDPKTSRNKRRRFEPKSSNSLEATPGSGFRFPLKQSLIAGC 60
           M LLGGG HGGLWGWNF LPD  TSRN RR FE KSSNSL+AT GSG++FPLKQSL AGC
Sbjct: 1   MHLLGGG-HGGLWGWNFFLPDSNTSRNNRRSFEAKSSNSLQATGGSGYQFPLKQSLTAGC 60

Query: 61  LSLSGDTIAQFIGRWRKGIALNSTSLSNSASLNRDGFSNIFSEHDWIRALRMLSYGFLLY 120
           L+LSGDTIAQ +GRWRK IAL      NS+SL +DG SNIFSEHDWIR+LRMLSYG L+Y
Sbjct: 61  LTLSGDTIAQLVGRWRKEIAL------NSSSLEKDGVSNIFSEHDWIRSLRMLSYGILIY 120

Query: 121 GPGSFAWYNYLDHALPKRSVENLMLKVLLNQVVLGPCVIAVVFAWNNIWLGKISQLPDKY 180
           GPGSFAWYNYLDH +PK+SV NLMLKVLLNQ+VLGPCVI  VFAWNNIWLGKI+QLP  Y
Sbjct: 121 GPGSFAWYNYLDHVMPKQSVGNLMLKVLLNQIVLGPCVIGAVFAWNNIWLGKINQLPAMY 180

Query: 181 RKDALPTLLYGFRFWIPVSILNFWAVPLQARVPFMSVASIFWNFYLSSTMSK 233
           RKDALPTLLYGFRFWIPVSILNFW VPLQARV FMSVASIFWNFYLSSTMSK
Sbjct: 181 RKDALPTLLYGFRFWIPVSILNFWVVPLQARVAFMSVASIFWNFYLSSTMSK 225

[Close]

BLAST of MS006376 vs. ExPASy TrEMBL
Match: A0A1S3BLI4 (protein sym-1 OS=Cucumis melo OX=3656 GN=LOC103491365 PE=3 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 4.8e-102
Identity = 187/233 (80.26%), Postives = 205/233 (87.98%), Query Frame = 0


Query: 1   MDLLGGGSHGGLWGWNFLLPDPKTSR-NKRRRFEPKSSNSLEATPGSGFRFPLKQSLIAG 60
           MD L GG +GGLWGWNFLLP  K+SR NKRR FEPKSSNSLEAT GSGFRFP+KQ + AG
Sbjct: 1   MDALSGG-NGGLWGWNFLLPHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPIKQYVTAG 60

Query: 61  CLSLSGDTIAQFIGRWRKGIALNSTSLSNSASLNRDGFSNIFSEHDWIRALRMLSYGFLL 120
           CL+LSGDTIAQF  R+RKGIALNSTSLS+SAS ++    NIF EHDWIR+LRM SYGFLL
Sbjct: 61  CLTLSGDTIAQFFSRYRKGIALNSTSLSDSASADK---MNIFLEHDWIRSLRMASYGFLL 120

Query: 121 YGPGSFAWYNYLDHALPKRSVENLMLKVLLNQVVLGPCVIAVVFAWNNIWLGKISQLPDK 180
           YGPGSFAWYNYLDH LPK+SVENL+LKV+LNQ+VLGP VI VVFAWN++WLGK+SQLP+ 
Sbjct: 121 YGPGSFAWYNYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLGKLSQLPEM 180

Query: 181 YRKDALPTLLYGFRFWIPVSILNFWAVPLQARVPFMSVASIFWNFYLSSTMSK 233
           YRKDALPTL YG RFWIPVSILNFW VPLQ RV FMSVASIFWNFYLSSTMSK
Sbjct: 181 YRKDALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK 229

[Close]

BLAST of MS006376 vs. ExPASy TrEMBL
Match: A0A0A0KEM8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421720 PE=3 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 1.1e-101
Identity = 187/233 (80.26%), Postives = 205/233 (87.98%), Query Frame = 0


Query: 1   MDLLGGGSHGGLWGWNFLLPDPKTSR-NKRRRFEPKSSNSLEATPGSGFRFPLKQSLIAG 60
           MD   GG +GGLW WNFLL   K+SR NKRR FEPKSSNSLEAT GSGFRFPLKQ + AG
Sbjct: 1   MDAFSGG-NGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAG 60

Query: 61  CLSLSGDTIAQFIGRWRKGIALNSTSLSNSASLNRDGFSNIFSEHDWIRALRMLSYGFLL 120
           CL+LSGDTIAQFIGR+RKGIALNST+LS+SAS ++    NIFSEHDWIR+LRM SYGFLL
Sbjct: 61  CLTLSGDTIAQFIGRYRKGIALNSTALSDSASADK---MNIFSEHDWIRSLRMASYGFLL 120

Query: 121 YGPGSFAWYNYLDHALPKRSVENLMLKVLLNQVVLGPCVIAVVFAWNNIWLGKISQLPDK 180
           YGPGSFAWYNYLDH LPK+SVENL+LKV+LNQ+VLGP VI VVFAWN++WLGK+SQLP+ 
Sbjct: 121 YGPGSFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEM 180

Query: 181 YRKDALPTLLYGFRFWIPVSILNFWAVPLQARVPFMSVASIFWNFYLSSTMSK 233
           YRKDALPTL YG RFWIPVSILNFW VPLQ RV FMSVASIFWNFYLSSTMSK
Sbjct: 181 YRKDALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK 229

[Close]

BLAST of MS006376 vs. TAIR 10
Match: AT2G42770.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 305.1 bits (780), Expect = 4.9e-83
Identity = 150/236 (63.56%), Postives = 183/236 (77.54%), Query Frame = 0


Query: 1   MDLLGG-GSHGGLWGWNFL--LPDPKTSRNKRRRFEPKSSNSLEAT-PGSGFRFPLKQSL 60
           MD LGG G  GG WGWN        K+S ++ ++    SS+S++ +    G+RFPLKQ++
Sbjct: 1   MDALGGCGGAGGFWGWNGFDQRRKKKSSGDRGKKRNSGSSDSVDVSRDAGGYRFPLKQAV 60

Query: 61  IAGCLSLSGDTIAQFIGRWRKGIALNSTSLSNSASLNRDGFSNIFSEHDWIRALRMLSYG 120
            AG L+ +GDTIAQ  GRW+K  AL      +S+ L+     NIFSEHDWIRALRM SYG
Sbjct: 61  TAGALTFTGDTIAQLSGRWKKRTALK----QSSSELDEGELWNIFSEHDWIRALRMSSYG 120

Query: 121 FLLYGPGSFAWYNYLDHALPKRSVENLMLKVLLNQVVLGPCVIAVVFAWNNIWLGKISQL 180
           FLLYGPGS+AWY +LDH+LPK +  NL+LKVLLNQV+LGP VIAV+FAWNN+WLGK+S+L
Sbjct: 121 FLLYGPGSYAWYQFLDHSLPKPTATNLVLKVLLNQVILGPSVIAVIFAWNNLWLGKLSEL 180

Query: 181 PDKYRKDALPTLLYGFRFWIPVSILNFWAVPLQARVPFMSVASIFWNFYLSSTMSK 233
            +KY+KDALPTLLYGFRFW+PVSILNFW VPLQARV FMS+ S+FWNFYLSSTMSK
Sbjct: 181 GNKYQKDALPTLLYGFRFWVPVSILNFWVVPLQARVAFMSMGSVFWNFYLSSTMSK 232

[Close]

BLAST of MS006376 vs. TAIR 10
Match: AT5G43140.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 79.3 bits (194), Expect = 4.4e-15
Identity = 40/124 (32.26%), Postives = 63/124 (50.81%), Query Frame = 0


Query: 105 DWIRALRMLSYGFLLYGPGSFAWYNYLDHALPKRSVENLMLKVLLNQVVLGPCVIAVVFA 164
           D IR  RM S+G +  GP    W++YL   LPKR V     K+++ QV+ GP    V ++
Sbjct: 121 DLIRTARMASFGLIFLGPSQHLWFSYLSKILPKRDVLTTFKKIMMGQVLFGPVSNTVFYS 180

Query: 165 WNNIWLGKIS-QLPDKYRKDALPTLLYGFRFWIPVSILNFWAVPLQARVPFMSVASIFWN 224
           +N    G+ S ++  + ++D LPTL  G  +W     + F  VP+  +    S  +  W 
Sbjct: 181 YNAALQGENSEEIVARLKRDLLPTLKNGLMYWPVCDFVTFKYVPVHLQPLMNSSCAYIWT 240

Query: 225 FYLS 228
            YL+
Sbjct: 241 IYLT 244

The following BLAST results are available for this feature:

BLAST of MS006376 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147925.1	6.0e-131	99.14	protein Mpv17 [Momordica charantia]	[more]
KAG6589283.1	4.2e-108	83.62	Protein Mpv17, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022979.1 Pro...	[more]
XP_022930888.1	2.7e-107	83.19	protein Mpv17 isoform X1 [Cucurbita moschata] >XP_023529297.1 protein Mpv17 [Cuc...	[more]
XP_038887313.1	1.1e-105	82.33	protein SYM1 [Benincasa hispida]	[more]
XP_022989118.1	1.5e-105	81.90	protein Mpv17 [Cucurbita maxima]	[more]

BLAST of MS006376 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4P9K6	6.8e-13	31.11	Protein SYM1 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=SYM1 PE=3 ...	[more]
Q9NR77	8.9e-13	30.90	Peroxisomal membrane protein 2 OS=Homo sapiens OX=9606 GN=PXMP2 PE=1 SV=3	[more]
Q54FR4	3.4e-12	31.58	PXMP2/4 family protein 4 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290631 PE...	[more]
Q5TZ51	1.7e-11	28.17	Protein Mpv17 OS=Danio rerio OX=7955 GN=mpv17 PE=2 SV=1	[more]
Q66GV0	3.8e-11	29.23	Protein Mpv17 OS=Xenopus laevis OX=8355 GN=mpv17 PE=2 SV=2	[more]

BLAST of MS006376 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D1H6	2.9e-131	99.14	protein Mpv17 OS=Momordica charantia OX=3673 GN=LOC111016738 PE=3 SV=1	[more]
A0A6J1EWS4	1.3e-107	83.19	protein Mpv17 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437238 PE=3 SV=1	[more]
A0A6J1JPB9	7.2e-106	81.90	protein Mpv17 OS=Cucurbita maxima OX=3661 GN=LOC111486282 PE=3 SV=1	[more]
A0A1S3BLI4	4.8e-102	80.26	protein sym-1 OS=Cucumis melo OX=3656 GN=LOC103491365 PE=3 SV=1	[more]
A0A0A0KEM8	1.1e-101	80.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421720 PE=3 SV=1	[more]

BLAST of MS006376 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42770.1	4.9e-83	63.56	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT5G43140.1	4.4e-15	32.26	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007248	Mpv17/PMP22	PFAM	PF04117	Mpv17_PMP22	coord: 174..227 e-value: 1.6E-15 score: 57.0
IPR007248	Mpv17/PMP22	PANTHER	PTHR11266	PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17	coord: 1..232
None	No IPR available	PANTHER	PTHR11266:SF91	EXPRESSED PROTEIN	coord: 1..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS006376.1	MS006376.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane