MS006362 (gene) Bitter gourd (TR) v1

Overview


Name	MS006362
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Small ubiquitin-related modifier
Location	scaffold327: 111484 .. 111959 (-)
RNA-Seq Expression	MS006362
Synteny	MS006362

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGATCGAGAAGAAGAATGTCGAAACGAGAAGAGAGTACCCGAAAACCCGAGTCAGAACCCGACCCCGAGTATGTCAACATCAAGGTCAATGGACAGGTTCTGTTTCCGTCCCCCAATCCTCGTGAACACTGGAGATCTCTAGTCTCATTTGTGATTCTGTCTCTGTTCTTGATTCATAGGATGGGAGCGAAGTTTATTTCAGGGTTCGAAAGAAAACCCAACTGAAGAAGCTCATGGCATCGTACTGTCAACGACAAGGCCAGGATCAACGAATAGTTGCTTTTCTGCTCGACGGCCATCACATCACCGGAAACCAGACCCCGGAGCAGGTATTTTCCGATCTCCCCTTTTGGGCTTTAGTTTTTTGTCAAGTTTTGTGGATGATTTTTGCTGATTTTCGTGTCGGTTTTCAGCTGGAGCTCAAGGATGGAGATGAAATTGATGCGATGAATCACCACGGCGGTGGCGGCGGAGCG

mRNA sequence

AGATCGAGAAGAAGAATGTCGAAACGAGAAGAGAGTACCCGAAAACCCGAGTCAGAACCCGACCCCGAGTATGTCAACATCAAGGTCAATGGACAGGATGGGAGCGAAGTTTATTTCAGGGTTCGAAAGAAAACCCAACTGAAGAAGCTCATGGCATCGTACTGTCAACGACAAGGCCAGGATCAACGAATAGTTGCTTTTCTGCTCGACGGCCATCACATCACCGGAAACCAGACCCCGGAGCAGCTGGAGCTCAAGGATGGAGATGAAATTGATGCGATGAATCACCACGGCGGTGGCGGCGGAGCG

Coding sequence (CDS)

AGATCGAGAAGAAGAATGTCGAAACGAGAAGAGAGTACCCGAAAACCCGAGTCAGAACCCGACCCCGAGTATGTCAACATCAAGGTCAATGGACAGGATGGGAGCGAAGTTTATTTCAGGGTTCGAAAGAAAACCCAACTGAAGAAGCTCATGGCATCGTACTGTCAACGACAAGGCCAGGATCAACGAATAGTTGCTTTTCTGCTCGACGGCCATCACATCACCGGAAACCAGACCCCGGAGCAGCTGGAGCTCAAGGATGGAGATGAAATTGATGCGATGAATCACCACGGCGGTGGCGGCGGAGCG

Protein sequence

RSRRRMSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGGA

Homology

[Close]

BLAST of MS006362 vs. NCBI nr
Match: XP_022148070.1 (small ubiquitin-related modifier 1-like [Momordica charantia])

HSP 1 Score: 199.1 bits (505), Expect = 1.8e-47
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 6   MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIV 65
           MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIV
Sbjct: 1   MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIV 60

Query: 66  AFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGGA 104
           AFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGGA
Sbjct: 61  AFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGGA 98

[Close]

BLAST of MS006362 vs. NCBI nr
Match: XP_038888534.1 (small ubiquitin-related modifier 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 144.8 bits (364), Expect = 4.1e-31
Identity = 68/91 (74.73%), Postives = 79/91 (86.81%), Query Frame = 0


Query: 10  EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLL 69
           EE+ RKPES+PD EYVN+KVNGQDGSEVYFR+ K+TQLKKLM SYC+RQG + R +AFLL
Sbjct: 11  EETVRKPESKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLL 70

Query: 70  DGHHITGNQTPEQLELKDGDEIDAMNHHGGG 101
           DGH I G QT E+LE++DGDEIDAM HHGGG
Sbjct: 71  DGHSIAGTQTAEELEMEDGDEIDAMKHHGGG 101

[Close]

BLAST of MS006362 vs. NCBI nr
Match: XP_022969393.1 (small ubiquitin-related modifier 1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 134.4 bits (337), Expect = 5.5e-28
Identity = 63/94 (67.02%), Postives = 76/94 (80.85%), Query Frame = 0


Query: 9   REESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFL 68
           +E  TRKPE++P   YVN+KVNGQDGSEVYFR+ K+TQL KLM  YC+RQ  + R +AFL
Sbjct: 9   QEAPTRKPEAQPGTNYVNVKVNGQDGSEVYFRICKRTQLSKLMKGYCKRQALELRTIAFL 68

Query: 69  LDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG 103
           LDGH I GNQT ++L ++DGDEIDAM HHGGGGG
Sbjct: 69  LDGHAIAGNQTADELGMEDGDEIDAMKHHGGGGG 102

[Close]

BLAST of MS006362 vs. NCBI nr
Match: XP_023553983.1 (small ubiquitin-related modifier 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 133.7 bits (335), Expect = 9.4e-28
Identity = 63/94 (67.02%), Postives = 77/94 (81.91%), Query Frame = 0


Query: 9   REESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFL 68
           RE  TRKPE+EP  +YVN+KVNGQDGSEVYFR+ K+TQL +LM +YC+RQ  +   +AFL
Sbjct: 9   REAPTRKPEAEPGSKYVNVKVNGQDGSEVYFRICKRTQLSELMKAYCKRQALELGTIAFL 68

Query: 69  LDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG 103
           LDGH I GNQT ++L ++DGDEIDAM HHGGGGG
Sbjct: 69  LDGHAIVGNQTADELGMEDGDEIDAMKHHGGGGG 102

[Close]

BLAST of MS006362 vs. NCBI nr
Match: XP_022952738.1 (small ubiquitin-related modifier 1-like [Cucurbita moschata])

HSP 1 Score: 131.3 bits (329), Expect = 4.7e-27
Identity = 63/95 (66.32%), Postives = 78/95 (82.11%), Query Frame = 0


Query: 9   REESTRKPESEP-DPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAF 68
           +E   RKPE+EP +P YVN+KVNGQDGSEVYFR+ K+TQL KLM +YC+RQ  + R +AF
Sbjct: 9   QEAPIRKPEAEPGNPNYVNVKVNGQDGSEVYFRICKRTQLSKLMKAYCKRQALELRTIAF 68

Query: 69  LLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG 103
           LLDGH I GNQT ++L ++DGD+IDAM HHGGGGG
Sbjct: 69  LLDGHAIAGNQTADELGMEDGDKIDAMKHHGGGGG 103

[Close]

BLAST of MS006362 vs. ExPASy Swiss-Prot
Match: P55857 (Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SUMO1 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 8.0e-22
Identity = 51/96 (53.12%), Postives = 67/96 (69.79%), Query Frame = 0


Query: 6   MSKREESTRKPE-SEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRI 65
           MS   E  +KP   E    ++N+KV GQDG+EV+FR+++ TQLKKLM +YC RQ  D   
Sbjct: 1   MSAAGEEDKKPAGGEGGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNA 60

Query: 66  VAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG 101
           +AFL DG  + G QTP++LE++DGDEIDAM H  GG
Sbjct: 61  IAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 96

[Close]

BLAST of MS006362 vs. ExPASy Swiss-Prot
Match: Q9FLP6 (Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.3e-21
Identity = 50/96 (52.08%), Postives = 67/96 (69.79%), Query Frame = 0


Query: 6   MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIV 65
           MS   E  +KP+      ++N+KV GQDG+EV+FR+++ TQLKKLM +YC RQ  D   +
Sbjct: 1   MSATPEEDKKPD---QGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSI 60

Query: 66  AFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGG 102
           AFL DG  +   QTP++LE++DGDEIDAM H  GGG
Sbjct: 61  AFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGG 93

[Close]

BLAST of MS006362 vs. ExPASy Swiss-Prot
Match: P55852 (Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1 SV=2)

HSP 1 Score: 102.1 bits (253), Expect = 4.0e-21
Identity = 49/97 (50.52%), Postives = 67/97 (69.07%), Query Frame = 0


Query: 6   MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIV 65
           MS  +E  +KP       ++N+KV GQDG+EV+FR+++ TQLKKLM +YC RQ  D   +
Sbjct: 1   MSANQEEDKKPGD--GGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSI 60

Query: 66  AFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG 103
           AFL DG  +   QTP++L+++DGDEIDAM H  GG G
Sbjct: 61  AFLFDGRRLRAEQTPDELDMEDGDEIDAMLHQTGGSG 95

[Close]

BLAST of MS006362 vs. ExPASy Swiss-Prot
Match: O13351 (Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pmt3 PE=1 SV=2)

HSP 1 Score: 85.1 bits (209), Expect = 5.0e-16
Identity = 38/88 (43.18%), Postives = 61/88 (69.32%), Query Frame = 0


Query: 13  TRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGH 72
           T + + +P  E++N+KV GQD +EV+F+++K T+  KLM  YC RQG+    + FL+DG 
Sbjct: 24  TSQQDVKPSTEHINLKVVGQDNNEVFFKIKKTTEFSKLMKIYCARQGKSMNSLRFLVDGE 83

Query: 73  HITGNQTPEQLELKDGDEIDAMNHHGGG 101
            I  +QTP +L+++DGD+I+A+    GG
Sbjct: 84  RIRPDQTPAELDMEDGDQIEAVLEQLGG 111

[Close]

BLAST of MS006362 vs. ExPASy Swiss-Prot
Match: Q7ZTK7 (Small ubiquitin-related modifier 2-A OS=Xenopus laevis OX=8355 GN=sumo2-a PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.6e-14
Identity = 36/78 (46.15%), Postives = 50/78 (64.10%), Query Frame = 0


Query: 23  EYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQ 82
           +++N+KV GQDGS V F+++++T L KLM +YC+RQG   R + F  DG  I    TP Q
Sbjct: 16  DHINLKVAGQDGSVVQFKIKRQTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQ 75

Query: 83  LELKDGDEIDAMNHHGGG 101
           LE++D D ID      GG
Sbjct: 76  LEMEDEDTIDVFQQQTGG 93

[Close]

BLAST of MS006362 vs. ExPASy TrEMBL
Match: A0A6J1D1W9 (small ubiquitin-related modifier 1-like OS=Momordica charantia OX=3673 GN=LOC111016840 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 8.8e-48
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 6   MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIV 65
           MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIV
Sbjct: 1   MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIV 60

Query: 66  AFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGGA 104
           AFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGGA
Sbjct: 61  AFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGGA 98

[Close]

BLAST of MS006362 vs. ExPASy TrEMBL
Match: A0A6J1I0U8 (small ubiquitin-related modifier 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111468415 PE=3 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.7e-28
Identity = 63/94 (67.02%), Postives = 76/94 (80.85%), Query Frame = 0


Query: 9   REESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFL 68
           +E  TRKPE++P   YVN+KVNGQDGSEVYFR+ K+TQL KLM  YC+RQ  + R +AFL
Sbjct: 9   QEAPTRKPEAQPGTNYVNVKVNGQDGSEVYFRICKRTQLSKLMKGYCKRQALELRTIAFL 68

Query: 69  LDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG 103
           LDGH I GNQT ++L ++DGDEIDAM HHGGGGG
Sbjct: 69  LDGHAIAGNQTADELGMEDGDEIDAMKHHGGGGG 102

[Close]

BLAST of MS006362 vs. ExPASy TrEMBL
Match: A0A6J1GLF8 (Small ubiquitin-related modifier OS=Cucurbita moschata OX=3662 GN=LOC111455344 PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.3e-27
Identity = 63/95 (66.32%), Postives = 78/95 (82.11%), Query Frame = 0


Query: 9   REESTRKPESEP-DPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAF 68
           +E   RKPE+EP +P YVN+KVNGQDGSEVYFR+ K+TQL KLM +YC+RQ  + R +AF
Sbjct: 9   QEAPIRKPEAEPGNPNYVNVKVNGQDGSEVYFRICKRTQLSKLMKAYCKRQALELRTIAF 68

Query: 69  LLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG 103
           LLDGH I GNQT ++L ++DGD+IDAM HHGGGGG
Sbjct: 69  LLDGHAIAGNQTADELGMEDGDKIDAMKHHGGGGG 103

[Close]

BLAST of MS006362 vs. ExPASy TrEMBL
Match: A0A5A7V249 (Small ubiquitin-related modifier 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1465G00130 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.5e-26
Identity = 64/95 (67.37%), Postives = 77/95 (81.05%), Query Frame = 0


Query: 10  EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLL 69
           EE+TRK E +P+ EYVN+KVNGQDGSEVYFR+ KK++L KLM SYC+RQ  +   +AFL+
Sbjct: 11  EETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLV 70

Query: 70  DGHHITGNQTPEQLELKDGDEIDAMNHH-GGGGGA 104
           DGH I G QT E+L L+DGDEIDAM HH GGGGGA
Sbjct: 71  DGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGGA 105

[Close]

BLAST of MS006362 vs. ExPASy TrEMBL
Match: A0A565CRL3 (Small ubiquitin-related modifier OS=Arabis nemorensis OX=586526 GN=ANE_LOCUS26510 PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 7.0e-21
Identity = 53/98 (54.08%), Postives = 71/98 (72.45%), Query Frame = 0


Query: 6   MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIV 65
           MS  +E  +KP  E    ++N+KV GQDG+EV+FR+++ TQLKKLM +YC RQ  D   +
Sbjct: 1   MSATQEEDKKP-GEQGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSI 60

Query: 66  AFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGGA 104
           AFL DG  + G QTP++L+++DGDEIDAM H  GGGGA
Sbjct: 61  AFLFDGRRLRGEQTPDELDMEDGDEIDAMLHQTGGGGA 97

[Close]

BLAST of MS006362 vs. TAIR 10
Match: AT5G55160.1 (small ubiquitin-like modifier 2 )

HSP 1 Score: 102.8 bits (255), Expect = 1.7e-22
Identity = 50/96 (52.08%), Postives = 67/96 (69.79%), Query Frame = 0


Query: 6   MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIV 65
           MS   E  +KP+      ++N+KV GQDG+EV+FR+++ TQLKKLM +YC RQ  D   +
Sbjct: 1   MSATPEEDKKPD---QGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSI 60

Query: 66  AFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGG 102
           AFL DG  +   QTP++LE++DGDEIDAM H  GGG
Sbjct: 61  AFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGG 93

[Close]

BLAST of MS006362 vs. TAIR 10
Match: AT4G26840.1 (small ubiquitin-like modifier 1 )

HSP 1 Score: 102.1 bits (253), Expect = 2.8e-22
Identity = 49/97 (50.52%), Postives = 67/97 (69.07%), Query Frame = 0


Query: 6   MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIV 65
           MS  +E  +KP       ++N+KV GQDG+EV+FR+++ TQLKKLM +YC RQ  D   +
Sbjct: 1   MSANQEEDKKPGD--GGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSI 60

Query: 66  AFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG 103
           AFL DG  +   QTP++L+++DGDEIDAM H  GG G
Sbjct: 61  AFLFDGRRLRAEQTPDELDMEDGDEIDAMLHQTGGSG 95

[Close]

BLAST of MS006362 vs. TAIR 10
Match: AT5G55160.2 (small ubiquitin-like modifier 2 )

HSP 1 Score: 93.6 bits (231), Expect = 1.0e-19
Identity = 50/109 (45.87%), Postives = 67/109 (61.47%), Query Frame = 0


Query: 6   MSKREESTRKPESEPDPEYVNIKVNGQ-------------DGSEVYFRVRKKTQLKKLMA 65
           MS   E  +KP+      ++N+KV GQ             DG+EV+FR+++ TQLKKLM 
Sbjct: 1   MSATPEEDKKPD---QGAHINLKVKGQAFFVVGTWLVIDTDGNEVFFRIKRSTQLKKLMN 60

Query: 66  SYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGG 102
           +YC RQ  D   +AFL DG  +   QTP++LE++DGDEIDAM H  GGG
Sbjct: 61  AYCDRQSVDFNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGG 106

[Close]

BLAST of MS006362 vs. TAIR 10
Match: AT5G55170.1 (small ubiquitin-like modifier 3 )

HSP 1 Score: 71.6 bits (174), Expect = 4.1e-13
Identity = 37/86 (43.02%), Postives = 51/86 (59.30%), Query Frame = 0


Query: 15  KPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHI 74
           KP  +    +V +KV  QDG EV F+ +K   LKKLM  YC R+G      AF+ +G  I
Sbjct: 8   KPIDQEQEAHVILKVKSQDGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAFIFNGARI 67

Query: 75  TGNQTPEQLELKDGDEIDAMNHHGGG 101
            G +TP++L+++DGD IDA     GG
Sbjct: 68  GGLETPDELDMEDGDVIDACRAMSGG 93

[Close]

BLAST of MS006362 vs. TAIR 10
Match: AT5G55856.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 67.0 bits (162), Expect = 1.0e-11
Identity = 31/77 (40.26%), Postives = 48/77 (62.34%), Query Frame = 0


Query: 24  YVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQL 83
           ++ +KV  QD   VYFR+++  +L+K+M +Y  + G +   + FL DG+ I  NQTP +L
Sbjct: 14  HITVKVKNQDDICVYFRIKRDVELRKMMHAYSDKVGVEMSTLRFLFDGNRIKLNQTPNEL 73

Query: 84  ELKDGDEIDAMNHHGGG 101
            L+D DEI+A     GG
Sbjct: 74  GLEDEDEIEAFGEQLGG 90

The following BLAST results are available for this feature:

BLAST of MS006362 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148070.1	1.8e-47	100.00	small ubiquitin-related modifier 1-like [Momordica charantia]	[more]
XP_038888534.1	4.1e-31	74.73	small ubiquitin-related modifier 1-like isoform X1 [Benincasa hispida]	[more]
XP_022969393.1	5.5e-28	67.02	small ubiquitin-related modifier 1-like isoform X2 [Cucurbita maxima]	[more]
XP_023553983.1	9.4e-28	67.02	small ubiquitin-related modifier 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022952738.1	4.7e-27	66.32	small ubiquitin-related modifier 1-like [Cucurbita moschata]	[more]

BLAST of MS006362 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P55857	8.0e-22	53.13	Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=S...	[more]
Q9FLP6	2.3e-21	52.08	Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1...	[more]
P55852	4.0e-21	50.52	Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1...	[more]
O13351	5.0e-16	43.18	Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC...	[more]
Q7ZTK7	3.6e-14	46.15	Small ubiquitin-related modifier 2-A OS=Xenopus laevis OX=8355 GN=sumo2-a PE=3 S...	[more]

BLAST of MS006362 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D1W9	8.8e-48	100.00	small ubiquitin-related modifier 1-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1I0U8	2.7e-28	67.02	small ubiquitin-related modifier 1-like isoform X2 OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1GLF8	2.3e-27	66.32	Small ubiquitin-related modifier OS=Cucurbita moschata OX=3662 GN=LOC111455344 P...	[more]
A0A5A7V249	2.5e-26	67.37	Small ubiquitin-related modifier 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A565CRL3	7.0e-21	54.08	Small ubiquitin-related modifier OS=Arabis nemorensis OX=586526 GN=ANE_LOCUS2651...	[more]

BLAST of MS006362 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55160.1	1.7e-22	52.08	small ubiquitin-like modifier 2	[more]
AT4G26840.1	2.8e-22	50.52	small ubiquitin-like modifier 1	[more]
AT5G55160.2	1.0e-19	45.87	small ubiquitin-like modifier 2	[more]
AT5G55170.1	4.1e-13	43.02	small ubiquitin-like modifier 3	[more]
AT5G55856.1	1.0e-11	40.26	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022617	Rad60/SUMO-like domain	PFAM	PF11976	Rad60-SLD	coord: 26..94 e-value: 9.0E-19 score: 67.1
None	No IPR available	GENE3D	3.10.20.90		coord: 1..100 e-value: 5.6E-31 score: 109.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR10562	SMALL UBIQUITIN-RELATED MODIFIER	coord: 6..100
None	No IPR available	PANTHER	PTHR10562:SF104	SMALL UBIQUITIN-RELATED MODIFIER 3	coord: 6..100
None	No IPR available	CDD	cd16116	Ubl_Smt3_like	coord: 23..96 e-value: 2.46903E-35 score: 113.478
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 23..100 score: 9.41707
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 11..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS006362.1	MS006362.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding