MS006325 (gene) Bitter gourd (TR) v1

Overview


Name	MS006325
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Phosducin, putative
Location	scaffold123_1: 41042 .. 43323 (-)
RNA-Seq Expression	MS006325
Synteny	MS006325

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGATTATCACTTTGTGTACAAAGACGTTGAAGGAGCCTCCACTCAGTGGGATGACATTCAGAGAAAGCTAGGAAACCTACCTCCAAAGCCTGCTCCATTCAAGCCCCCAGCCTTCACGCCTGCCCAAGATGGGGCGTCCGTCCCCAAAGACAAGTCTTGGATCGACCAGAAGACTGAGGAGGAGCTCGAAGACCTCGAGGACGATCTAGATCTCGATGACGACAACTTCCTTGAAGAGTATAGGTTTGTTTTCTCTTCATTAATTTATATTCGTGTTCGGTTGTTGCTTTTTTGTAATTTTATCCATTGCTGGGAGAATTATTGAGAAGTAATTAAATTAGTAAAATTGACCTCAGGTGATGCCTGATTGGTCTATTTGATGGCCAGAAGGAAATCAGATGACATTGGTTGGTTTATTAATTGAAGGAAATCTTAATTTGCTTATCACCATCTTGATTATTAGTTAATTAATTACCTAATTTGTCTTCTTCATCGAATTTCTCACTGTAAGCCACATACTTTGGGATTCTTTAACAAAAGAATTACAAAATCTCTGAATTTGATGGGATAGGAAAAGGAGGTTGGAGGAGATTAGAGAAGCAGCTAAAATCTCTAAATTTGGATCAATAAATCCAATATCAGGGTCGGATTTTGTGCGAGAGGTTTCACAGGCTCCATCTGATGTTTGGGTCGTTGTTATTCTCTACAAAGCAGGGTACCATCCATATCCTACGCACTGAATGTTTTTATTGTTCTCTATATTCTGATGACATTTACATTTTTGTGTTAACATCCATGTTATGTTATGATCTCATCACAGAATTCAAGAATGCGATGTGTTGATGAATTGTTTGCAAGAACTGGCCGCAAGATATCCAGCCACAAAATTTGTTAAAATAATTTCCACAGATTGCATTCCGAACTACCCAGATTGTAATCTTCCGACTCTGTTAGTATACAACAATGGCGCAGTGAAAGCAAATTACGTGGGCCTTCGAAGTTTCGGCAGAAGATGCACGCCAGAAGGTACATACTTATATCTAACTACGAATGCGTCGTTTGGTTTATCTTTGTGCTCTCTGTAACTTCTTTTCTAATTAGTTAGATTTCATTGCACTAATGTACAGCGATCTTCACGAGATTGGTTAGATATTTGACTGAAAGTTATCACAATACTTTCATCATGGCACAACATTTCACATCATAATGGTTGCATTTGAAATCGTGTTATATGGTTGAGTTCTAACTTTGTAAGCCATCCGATACTTCAACTTTCATTAATTCTAGTGCGTTTATTTGCTGGGTTATGTGAAACGCATGTCTAAGGGAAGTTTTACAGACTCTTGCTAGAGGAGAAATTAATGATTTTTATAACTCAAGTGATGAACTCTTCTTCTGAATGGAACTGAATGTCTGTAACATCTACCCTAGAAAACACCACCTTAAAATCTATGCATTCTAGGCCTGTGGTTATGGGTTTAAATACTATTTTGGTGTCTAAACTTTCAGGTTTATCTATTTTAGTCTATGAACTTTTAAAATGTCTATTATAGTTCTTGAACTTTAGGAAACTAAACATTTTGGTTCTTGTACTTTCAAAATGTTAATTTTAGTCATTGTATATTATTTTGCCACTTGAAATTCTCGAACTCAATACTCGCTCTCAACCTATTTGGTTTGAGTACATGCTTTTTTTAGTACAAGTACATGCTCATAATAACATGTTAATATGCATACTTGAAGTTGTATTCTTAATTTGTTAAATTAAGATAAGGGTAAGGTCAAATTGATCACATTTTTAAAGTTTAGGGACTAAAATAAACATTTAGAATGTTCAAGGACTAAAACAAAAGTTTCAGGACCAAAATAGAATAATCGCAAAAGTTTAGAGACCGAAATGAGATTTAATTCTAACCCACGAATGCTTCTATCCTATGGTATTTTATTTGATAACCATTGGAGGATGCTTTGAGATGGGAAATATTTAAAACAATTTATCCTAGATTTTGCCATGCTGTTGACTATATTTGGGTTGTAAGCTCTGTAACATCGTTGGAATGATCTTATAACTTTTGTGGAACCAGCAGATTAGTAAATTCGTGTTTATGGTTTCCAGGTGTTGCACTAGTTCTTTGTCAAGCCGATCCAGTGCTTGATGATGGTCAGTCTGGAAACGATCGATCTAGAACATCCGTGCTTGAAGGAGTACGCAGAAAGATAATCGAGAAAGTAGTGAGAGAGCATGAAGATGAGAATGACGATGGAAATTCGAGTGAT

mRNA sequence

ATGGCTGATTATCACTTTGTGTACAAAGACGTTGAAGGAGCCTCCACTCAGTGGGATGACATTCAGAGAAAGCTAGGAAACCTACCTCCAAAGCCTGCTCCATTCAAGCCCCCAGCCTTCACGCCTGCCCAAGATGGGGCGTCCGTCCCCAAAGACAAGTCTTGGATCGACCAGAAGACTGAGGAGGAGCTCGAAGACCTCGAGGACGATCTAGATCTCGATGACGACAACTTCCTTGAAGAGTATAGGAAAAGGAGGTTGGAGGAGATTAGAGAAGCAGCTAAAATCTCTAAATTTGGATCAATAAATCCAATATCAGGGTCGGATTTTGTGCGAGAGGTTTCACAGGCTCCATCTGATGTTTGGGTCGTTGTTATTCTCTACAAAGCAGGAATTCAAGAATGCGATGTGTTGATGAATTGTTTGCAAGAACTGGCCGCAAGATATCCAGCCACAAAATTTGTTAAAATAATTTCCACAGATTGCATTCCGAACTACCCAGATTGTAATCTTCCGACTCTGTTAGTATACAACAATGGCGCAGTGAAAGCAAATTACGTGGGCCTTCGAAGTTTCGGCAGAAGATGCACGCCAGAAGGTGTTGCACTAGTTCTTTGTCAAGCCGATCCAGTGCTTGATGATGGTCAGTCTGGAAACGATCGATCTAGAACATCCGTGCTTGAAGGAGTACGCAGAAAGATAATCGAGAAAGTAGTGAGAGAGCATGAAGATGAGAATGACGATGGAAATTCGAGTGAT

Coding sequence (CDS)

ATGGCTGATTATCACTTTGTGTACAAAGACGTTGAAGGAGCCTCCACTCAGTGGGATGACATTCAGAGAAAGCTAGGAAACCTACCTCCAAAGCCTGCTCCATTCAAGCCCCCAGCCTTCACGCCTGCCCAAGATGGGGCGTCCGTCCCCAAAGACAAGTCTTGGATCGACCAGAAGACTGAGGAGGAGCTCGAAGACCTCGAGGACGATCTAGATCTCGATGACGACAACTTCCTTGAAGAGTATAGGAAAAGGAGGTTGGAGGAGATTAGAGAAGCAGCTAAAATCTCTAAATTTGGATCAATAAATCCAATATCAGGGTCGGATTTTGTGCGAGAGGTTTCACAGGCTCCATCTGATGTTTGGGTCGTTGTTATTCTCTACAAAGCAGGAATTCAAGAATGCGATGTGTTGATGAATTGTTTGCAAGAACTGGCCGCAAGATATCCAGCCACAAAATTTGTTAAAATAATTTCCACAGATTGCATTCCGAACTACCCAGATTGTAATCTTCCGACTCTGTTAGTATACAACAATGGCGCAGTGAAAGCAAATTACGTGGGCCTTCGAAGTTTCGGCAGAAGATGCACGCCAGAAGGTGTTGCACTAGTTCTTTGTCAAGCCGATCCAGTGCTTGATGATGGTCAGTCTGGAAACGATCGATCTAGAACATCCGTGCTTGAAGGAGTACGCAGAAAGATAATCGAGAAAGTAGTGAGAGAGCATGAAGATGAGAATGACGATGGAAATTCGAGTGAT

Protein sequence

MADYHFVYKDVEGASTQWDDIQRKLGNLPPKPAPFKPPAFTPAQDGASVPKDKSWIDQKTEEELEDLEDDLDLDDDNFLEEYRKRRLEEIREAAKISKFGSINPISGSDFVREVSQAPSDVWVVVILYKAGIQECDVLMNCLQELAARYPATKFVKIISTDCIPNYPDCNLPTLLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQADPVLDDGQSGNDRSRTSVLEGVRRKIIEKVVREHEDENDDGNSSD

Homology

[Close]

BLAST of MS006325 vs. NCBI nr
Match: XP_022141847.1 (phosducin-like protein 3 [Momordica charantia] >XP_022141848.1 phosducin-like protein 3 [Momordica charantia] >XP_022141849.1 phosducin-like protein 3 [Momordica charantia] >XP_022141850.1 phosducin-like protein 3 [Momordica charantia] >XP_022141851.1 phosducin-like protein 3 [Momordica charantia])

HSP 1 Score: 509.6 bits (1311), Expect = 1.5e-140
Identity = 251/253 (99.21%), Postives = 252/253 (99.60%), Query Frame = 0


Query: 1   MADYHFVYKDVEGASTQWDDIQRKLGNLPPKPAPFKPPAFTPAQDGASVPKDKSWIDQKT 60
           MADYHFVYKDVEGASTQWDD+QRKLGNLPPKPAPFKPPAFTPAQDGASVPKDKSWIDQKT
Sbjct: 1   MADYHFVYKDVEGASTQWDDVQRKLGNLPPKPAPFKPPAFTPAQDGASVPKDKSWIDQKT 60

Query: 61  EEELEDLEDDLDLDDDNFLEEYRKRRLEEIREAAKISKFGSINPISGSDFVREVSQAPSD 120
           EEELEDLEDDLDLDDDNFLEEYRKRRLEEIREAAKISKFGSINPISGSDFVREVSQAPSD
Sbjct: 61  EEELEDLEDDLDLDDDNFLEEYRKRRLEEIREAAKISKFGSINPISGSDFVREVSQAPSD 120

Query: 121 VWVVVILYKAGIQECDVLMNCLQELAARYPATKFVKIISTDCIPNYPDCNLPTLLVYNNG 180
           VWVVVILYK GIQECDVLMNCLQELAARYPATKFVKIISTDCIPNYPDCNLPTLLVYNNG
Sbjct: 121 VWVVVILYKEGIQECDVLMNCLQELAARYPATKFVKIISTDCIPNYPDCNLPTLLVYNNG 180

Query: 181 AVKANYVGLRSFGRRCTPEGVALVLCQADPVLDDGQSGNDRSRTSVLEGVRRKIIEKVVR 240
           AVKANYVGLRSFGRRCTPEGVALVLCQADPVLDDGQSGNDRSRTSVLEGVRRKIIEKVVR
Sbjct: 181 AVKANYVGLRSFGRRCTPEGVALVLCQADPVLDDGQSGNDRSRTSVLEGVRRKIIEKVVR 240

Query: 241 EHEDENDDGNSSD 254
           EHEDENDDGNSSD
Sbjct: 241 EHEDENDDGNSSD 253

[Close]

BLAST of MS006325 vs. NCBI nr
Match: XP_022925476.1 (phosducin-like protein 3 isoform X1 [Cucurbita moschata])

HSP 1 Score: 477.2 bits (1227), Expect = 8.5e-131
Identity = 235/253 (92.89%), Postives = 242/253 (95.65%), Query Frame = 0


Query: 1   MADYHFVYKDVEGASTQWDDIQRKLGNLPPKPAPFKPPAFTPAQDGASVPKDKSWIDQKT 60
           M DYHFVYKDVEGASTQWDDIQRKLGNLPPKPAPFKPP FTPAQD ASV KDKSWIDQKT
Sbjct: 1   MGDYHFVYKDVEGASTQWDDIQRKLGNLPPKPAPFKPPGFTPAQDEASVSKDKSWIDQKT 60

Query: 61  EEELEDLEDDLDLDDDNFLEEYRKRRLEEIREAAKISKFGSINPISGSDFVREVSQAPSD 120
           EEELEDLEDDLDLDDDNFL+EYRK+RL EIREAAKISKFGS+NPISGSDFVREVSQAPSD
Sbjct: 61  EEELEDLEDDLDLDDDNFLQEYRKKRLVEIREAAKISKFGSVNPISGSDFVREVSQAPSD 120

Query: 121 VWVVVILYKAGIQECDVLMNCLQELAARYPATKFVKIISTDCIPNYPDCNLPTLLVYNNG 180
           VWVVVILYK GIQECDVLMNCLQELA RYPATKFVKIISTDCIPNYPDCNLPTLLVYNNG
Sbjct: 121 VWVVVILYKEGIQECDVLMNCLQELATRYPATKFVKIISTDCIPNYPDCNLPTLLVYNNG 180

Query: 181 AVKANYVGLRSFGRRCTPEGVALVLCQADPVLDDGQSGNDRSRTSVLEGVRRKIIEKVVR 240
           AVKANYVGLRSFGRRCTPEGVALVLCQADPVL+DGQSGND SR S+LEGVRRKIIEKVVR
Sbjct: 181 AVKANYVGLRSFGRRCTPEGVALVLCQADPVLNDGQSGNDESRKSMLEGVRRKIIEKVVR 240

Query: 241 EHEDENDDGNSSD 254
           +HED  DDG+SSD
Sbjct: 241 DHEDGIDDGSSSD 253

[Close]

BLAST of MS006325 vs. NCBI nr
Match: XP_022973988.1 (phosducin-like protein 3 [Cucurbita maxima])

HSP 1 Score: 476.5 bits (1225), Expect = 1.4e-130
Identity = 235/253 (92.89%), Postives = 242/253 (95.65%), Query Frame = 0


Query: 1   MADYHFVYKDVEGASTQWDDIQRKLGNLPPKPAPFKPPAFTPAQDGASVPKDKSWIDQKT 60
           M DYHFVYKDVEGASTQWDDIQ KLGNLPPKPAPFKPPAFTPAQD ASV KDKSWIDQKT
Sbjct: 1   MGDYHFVYKDVEGASTQWDDIQTKLGNLPPKPAPFKPPAFTPAQDEASVSKDKSWIDQKT 60

Query: 61  EEELEDLEDDLDLDDDNFLEEYRKRRLEEIREAAKISKFGSINPISGSDFVREVSQAPSD 120
           EEELEDLEDDLDLDDDNFL+EYRK+RL EIREAAKISKFGS+NPISGSDFVREVSQAPSD
Sbjct: 61  EEELEDLEDDLDLDDDNFLQEYRKKRLVEIREAAKISKFGSVNPISGSDFVREVSQAPSD 120

Query: 121 VWVVVILYKAGIQECDVLMNCLQELAARYPATKFVKIISTDCIPNYPDCNLPTLLVYNNG 180
           VWVVVILYK GIQECDVLMNCLQELA RYPATKFVKIISTDCIPNYPDCNLPTLLVYNNG
Sbjct: 121 VWVVVILYKEGIQECDVLMNCLQELATRYPATKFVKIISTDCIPNYPDCNLPTLLVYNNG 180

Query: 181 AVKANYVGLRSFGRRCTPEGVALVLCQADPVLDDGQSGNDRSRTSVLEGVRRKIIEKVVR 240
           AVKANYVGLRSFGRRCTPEGVALVLCQADPVL+DGQSGND SR S+LEGVRRKIIEKVVR
Sbjct: 181 AVKANYVGLRSFGRRCTPEGVALVLCQADPVLNDGQSGNDESRKSMLEGVRRKIIEKVVR 240

Query: 241 EHEDENDDGNSSD 254
           +HED  DDG+SSD
Sbjct: 241 DHEDGIDDGSSSD 253

[Close]

BLAST of MS006325 vs. NCBI nr
Match: XP_023535516.1 (phosducin-like protein 3 [Cucurbita pepo subsp. pepo] >XP_023535517.1 phosducin-like protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 476.5 bits (1225), Expect = 1.4e-130
Identity = 235/253 (92.89%), Postives = 242/253 (95.65%), Query Frame = 0


Query: 1   MADYHFVYKDVEGASTQWDDIQRKLGNLPPKPAPFKPPAFTPAQDGASVPKDKSWIDQKT 60
           M DYHFVYKDVEGASTQWDDIQ KLGNLPPKPAPFKPPAFTPAQD ASV KDKSWIDQKT
Sbjct: 1   MGDYHFVYKDVEGASTQWDDIQAKLGNLPPKPAPFKPPAFTPAQDEASVSKDKSWIDQKT 60

Query: 61  EEELEDLEDDLDLDDDNFLEEYRKRRLEEIREAAKISKFGSINPISGSDFVREVSQAPSD 120
           EEELEDLEDDLDLDDDNFL+EYRK+RL EIREAAKISKFGS+NPISGSDFVREVSQAPSD
Sbjct: 61  EEELEDLEDDLDLDDDNFLQEYRKKRLVEIREAAKISKFGSVNPISGSDFVREVSQAPSD 120

Query: 121 VWVVVILYKAGIQECDVLMNCLQELAARYPATKFVKIISTDCIPNYPDCNLPTLLVYNNG 180
           VWVVVILYK GIQECDVLMNCLQELA RYPATKFVKIISTDCIPNYPDCNLPTLLVYNNG
Sbjct: 121 VWVVVILYKEGIQECDVLMNCLQELATRYPATKFVKIISTDCIPNYPDCNLPTLLVYNNG 180

Query: 181 AVKANYVGLRSFGRRCTPEGVALVLCQADPVLDDGQSGNDRSRTSVLEGVRRKIIEKVVR 240
           AVKANYVGLRSFGRRCTPEGVALVLCQADPVL+DGQSGND SR S+LEGVRRKIIEKVVR
Sbjct: 181 AVKANYVGLRSFGRRCTPEGVALVLCQADPVLNDGQSGNDESRKSMLEGVRRKIIEKVVR 240

Query: 241 EHEDENDDGNSSD 254
           +HED  DDG+SSD
Sbjct: 241 DHEDGIDDGSSSD 253

[Close]

BLAST of MS006325 vs. NCBI nr
Match: KAG7025184.1 (Viral IAP-associated factor-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 475.7 bits (1223), Expect = 2.5e-130
Identity = 234/253 (92.49%), Postives = 242/253 (95.65%), Query Frame = 0


Query: 1   MADYHFVYKDVEGASTQWDDIQRKLGNLPPKPAPFKPPAFTPAQDGASVPKDKSWIDQKT 60
           M DYHFVYKDVEGASTQWDDIQRKLGNLPPKPAPFKPP FTPAQD ASV KDKSWIDQKT
Sbjct: 1   MGDYHFVYKDVEGASTQWDDIQRKLGNLPPKPAPFKPPGFTPAQDEASVSKDKSWIDQKT 60

Query: 61  EEELEDLEDDLDLDDDNFLEEYRKRRLEEIREAAKISKFGSINPISGSDFVREVSQAPSD 120
           EEELEDLEDDLDLDDDNFL+EYRK+RL EIREAAKISKFGS+NPISGSDFVREVSQAPSD
Sbjct: 61  EEELEDLEDDLDLDDDNFLQEYRKKRLVEIREAAKISKFGSVNPISGSDFVREVSQAPSD 120

Query: 121 VWVVVILYKAGIQECDVLMNCLQELAARYPATKFVKIISTDCIPNYPDCNLPTLLVYNNG 180
           VWVVVILYK GIQECDVLMNCLQELA RYPATKFVKIISTDCIPNYPDCNLPTLLVYNNG
Sbjct: 121 VWVVVILYKEGIQECDVLMNCLQELATRYPATKFVKIISTDCIPNYPDCNLPTLLVYNNG 180

Query: 181 AVKANYVGLRSFGRRCTPEGVALVLCQADPVLDDGQSGNDRSRTSVLEGVRRKIIEKVVR 240
           AVKANYVGLRSFGRRCTPEGVALVLCQADPVL+DGQSGN+ SR S+LEGVRRKIIEKVVR
Sbjct: 181 AVKANYVGLRSFGRRCTPEGVALVLCQADPVLNDGQSGNEESRKSMLEGVRRKIIEKVVR 240

Query: 241 EHEDENDDGNSSD 254
           +HED  DDG+SSD
Sbjct: 241 DHEDGIDDGSSSD 253

[Close]

BLAST of MS006325 vs. ExPASy Swiss-Prot
Match: Q9H2J4 (Phosducin-like protein 3 OS=Homo sapiens OX=9606 GN=PDCL3 PE=1 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.3e-33
Identity = 88/236 (37.29%), Postives = 131/236 (55.51%), Query Frame = 0


Query: 14  ASTQWDDIQRKLGNLPPKPAPFKPPAFTPAQDGASVPKDKSWIDQKTEEELEDLEDDLDL 73
           A T+W+DI RK G LPPK +  +       +            +  T EELED ED+ + 
Sbjct: 6   ADTEWNDILRKKGILPPKESLKELEEEAEEEQRILQQSVVKTYEDMTLEELEDHEDEFNE 65

Query: 74  DDDNFLEEYRKRRLEEIREAAKISKFGSINPISGSDFVREVSQAPSDVWVVVILYKAGIQ 133
           +D+  +E YR+RRL E +     +KFG +  ISG D+V+EV++A   +WV++ LYK GI 
Sbjct: 66  EDERAIEMYRRRRLAEWKATKLKNKFGEVLEISGKDYVQEVTKAGEGLWVILHLYKQGIP 125

Query: 134 ECDVLMNCLQELAARYPATKFVKIISTDCIPNYPDCNLPTLLVYNNGAVKANYVGLRSF- 193
            C ++   L  LA ++P  KF+K IST CIPNYPD NLPT+ VY  G +KA ++G   F 
Sbjct: 126 LCALINQHLSGLARKFPDVKFIKAISTTCIPNYPDRNLPTIFVYLEGDIKAQFIGPLVFG 185

Query: 194 GRRCTPEGVALVLCQADPVLDDGQSGNDRSRTSV-LEGVRRKIIEKVVREHEDEND 248
           G   T + +   L ++  ++ D +    +    V L  VRR ++ K  R+ + E D
Sbjct: 186 GMNLTRDELEWKLSESGAIMTDLEENPKKPIEDVLLSSVRRSVLMK--RDSDSEGD 239

[Close]

BLAST of MS006325 vs. ExPASy Swiss-Prot
Match: Q8MR62 (Viral IAP-associated factor homolog OS=Drosophila melanogaster OX=7227 GN=viaf PE=1 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 8.5e-33
Identity = 84/242 (34.71%), Postives = 142/242 (58.68%), Query Frame = 0


Query: 16  TQWDDIQRKLGNLPP--KPAPFKPPAFTPAQDGA-----SVPKDKSWIDQKTEE-ELEDL 75
           T+W+D+ R  G + P  K A           D A      +P ++   D+K ++  L++L
Sbjct: 8   TEWNDVLRAKGIIGPKAKEAEITEDQIQKLMDDAIQRRTDLPLNEGQRDKKIDDMSLDEL 67

Query: 76  EDDLDLDDDNFLEEYRKRRLEEIREAAKISKFGSINPISGSDFVREVSQAPSDVWVVVIL 135
           ++  D +D+  LE+YR+RR+ E+R  A+ ++FGS+  ISG D+V EV++A   +WVV+ L
Sbjct: 68  DELEDSEDEAVLEQYRQRRIAEMRATAEKARFGSVREISGQDYVNEVTKAGEGIWVVLHL 127

Query: 136 YKAGIQECDVLMNCLQELAARYPATKFVKIISTDCIPNYPDCNLPTLLVYNNGAVKANYV 195
           Y  G+  C ++ + +Q+LA R+P TKFV+ ++T CIPN+P+ NLPT+ +Y+ GA++  Y+
Sbjct: 128 YANGVPLCALIHHHMQQLAVRFPQTKFVRSVATTCIPNFPEKNLPTIFIYHEGALRKQYI 187

Query: 196 G-LRSFGRRCTPEGVALVLCQADPVLDDGQSGNDRSRTSVLEGVRRKIIEKVVREHEDEN 249
           G L   G + T E +  +L QA  V            T + E  R +I +K++ + ED++
Sbjct: 188 GPLELRGDKLTAEELEFMLGQAGAV-----------PTEITEDPRPQIRDKMLADLEDKS 238

[Close]

BLAST of MS006325 vs. ExPASy Swiss-Prot
Match: Q5RB77 (Phosducin-like protein 3 OS=Pongo abelii OX=9601 GN=PDCL3 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 3.2e-32
Identity = 86/236 (36.44%), Postives = 130/236 (55.08%), Query Frame = 0


Query: 14  ASTQWDDIQRKLGNLPPKPAPFKPPAFTPAQDGASVPKDKSWIDQKTEEELEDLEDDLDL 73
           A T+W+DI RK G LPPK +  +       +            +  T EEL+D ED+ + 
Sbjct: 6   ADTEWNDILRKKGILPPKESLKELEEEAEEEQRILQQSVVKTYEDMTLEELDDHEDEFNE 65

Query: 74  DDDNFLEEYRKRRLEEIREAAKISKFGSINPISGSDFVREVSQAPSDVWVVVILYKAGIQ 133
           +D+  +E YR++RL E +     +KFG +  ISG D+V+EV++A   +WV++ LYK GI 
Sbjct: 66  EDERAIEMYRRQRLAEWKVTKLKNKFGEVLEISGKDYVQEVTKAGEGLWVILHLYKQGIP 125

Query: 134 ECDVLMNCLQELAARYPATKFVKIISTDCIPNYPDCNLPTLLVYNNGAVKANYVGLRSF- 193
            C ++   L  LA ++P  KF+K IST CIPNYPD NLPT+ VY  G +KA ++G   F 
Sbjct: 126 LCALINQHLSGLARKFPDVKFIKAISTTCIPNYPDRNLPTIFVYLEGDIKAQFIGPLVFG 185

Query: 194 GRRCTPEGVALVLCQADPVLDDGQSGNDRSRTSV-LEGVRRKIIEKVVREHEDEND 248
           G   T + +   L ++  ++ D +    +    V L  VRR  + K  R+ + E D
Sbjct: 186 GMNLTRDELEWKLSESGAIMTDLEENPKKPIEDVLLSSVRRSALMK--RDSDSEGD 239

[Close]

BLAST of MS006325 vs. ExPASy Swiss-Prot
Match: Q6P268 (Phosducin-like protein 3 OS=Danio rerio OX=7955 GN=pdcl3 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 5.5e-32
Identity = 78/181 (43.09%), Postives = 110/181 (60.77%), Query Frame = 0


Query: 14  ASTQWDDIQRKLGNLPPKPAPFKPPAFTPAQ-DGASVPKDKSWIDQKTEEELEDLEDDLD 73
           A T+W+DI RK G LPPK  P +            SV K     +  T EELE+ ED+  
Sbjct: 6   ADTEWNDILRKKGILPPKETPVEEEEDEQLHLQSQSVVKT---YEDMTLEELEENEDEFS 65

Query: 74  LDDDNFLEEYRKRRLEEIREAAKISKFGSINPISGSDFVREVSQAPSDVWVVVILYKAGI 133
            +D++ +E YR +RL E +     + FG +  ISG D+V+EV++A   +WVV+ LYK GI
Sbjct: 66  EEDEHAMEMYRLKRLAEWKANQMKNVFGELKEISGQDYVQEVNKAGEGIWVVLHLYKQGI 125

Query: 134 QECDVLMNCLQELAARYPATKFVKIISTDCIPNYPDCNLPTLLVYNNGAVKANYVGLRSF 193
             C ++   L +LA ++P +KF+K IS+ CIPNYPD NLPTL VY +G +KA ++G   F
Sbjct: 126 PLCSLINQHLAQLARKFPQSKFLKSISSTCIPNYPDRNLPTLFVYRDGEMKAQFIGPLVF 183

[Close]

BLAST of MS006325 vs. ExPASy Swiss-Prot
Match: Q8BVF2 (Phosducin-like protein 3 OS=Mus musculus OX=10090 GN=Pdcl3 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.1e-31
Identity = 76/182 (41.76%), Postives = 110/182 (60.44%), Query Frame = 0


Query: 14  ASTQWDDIQRKLGNLPPKPAPFKPPAFTPAQDGASVPKDK--SWIDQKTEEELEDLEDDL 73
           A T+W+DI RK G LPPK +  K      A+    + +       +  T EELE+ ED+ 
Sbjct: 6   ADTEWNDILRKKGILPPKES-LKELEEEEAEKEEQLLQQSVVKTYEDMTLEELEENEDEF 65

Query: 74  DLDDDNFLEEYRKRRLEEIREAAKISKFGSINPISGSDFVREVSQAPSDVWVVVILYKAG 133
             +D+  +E YR++RL E +     +KFG +  ISG D+V+EV++A   +WV++ LYK G
Sbjct: 66  SEEDERAIEMYRQQRLAEWKATQLKNKFGEVLEISGKDYVQEVTKAGEGLWVILHLYKQG 125

Query: 134 IQECDVLMNCLQELAARYPATKFVKIISTDCIPNYPDCNLPTLLVYNNGAVKANYVGLRS 193
           I  C ++ + L  LA ++P  KF+K IST CIPNYPD NLPT+ VY  G +KA ++G   
Sbjct: 126 IPLCSLINHHLSGLARKFPDVKFIKAISTTCIPNYPDRNLPTVFVYREGDIKAQFIGPLV 185

[Close]

BLAST of MS006325 vs. ExPASy TrEMBL
Match: A0A6J1CKG4 (phosducin-like protein 3 OS=Momordica charantia OX=3673 GN=LOC111012114 PE=3 SV=1)

HSP 1 Score: 509.6 bits (1311), Expect = 7.5e-141
Identity = 251/253 (99.21%), Postives = 252/253 (99.60%), Query Frame = 0


Query: 1   MADYHFVYKDVEGASTQWDDIQRKLGNLPPKPAPFKPPAFTPAQDGASVPKDKSWIDQKT 60
           MADYHFVYKDVEGASTQWDD+QRKLGNLPPKPAPFKPPAFTPAQDGASVPKDKSWIDQKT
Sbjct: 1   MADYHFVYKDVEGASTQWDDVQRKLGNLPPKPAPFKPPAFTPAQDGASVPKDKSWIDQKT 60

Query: 61  EEELEDLEDDLDLDDDNFLEEYRKRRLEEIREAAKISKFGSINPISGSDFVREVSQAPSD 120
           EEELEDLEDDLDLDDDNFLEEYRKRRLEEIREAAKISKFGSINPISGSDFVREVSQAPSD
Sbjct: 61  EEELEDLEDDLDLDDDNFLEEYRKRRLEEIREAAKISKFGSINPISGSDFVREVSQAPSD 120

Query: 121 VWVVVILYKAGIQECDVLMNCLQELAARYPATKFVKIISTDCIPNYPDCNLPTLLVYNNG 180
           VWVVVILYK GIQECDVLMNCLQELAARYPATKFVKIISTDCIPNYPDCNLPTLLVYNNG
Sbjct: 121 VWVVVILYKEGIQECDVLMNCLQELAARYPATKFVKIISTDCIPNYPDCNLPTLLVYNNG 180

Query: 181 AVKANYVGLRSFGRRCTPEGVALVLCQADPVLDDGQSGNDRSRTSVLEGVRRKIIEKVVR 240
           AVKANYVGLRSFGRRCTPEGVALVLCQADPVLDDGQSGNDRSRTSVLEGVRRKIIEKVVR
Sbjct: 181 AVKANYVGLRSFGRRCTPEGVALVLCQADPVLDDGQSGNDRSRTSVLEGVRRKIIEKVVR 240

Query: 241 EHEDENDDGNSSD 254
           EHEDENDDGNSSD
Sbjct: 241 EHEDENDDGNSSD 253

[Close]

BLAST of MS006325 vs. ExPASy TrEMBL
Match: A0A6J1ECB4 (phosducin-like protein 3 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432767 PE=3 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 4.1e-131
Identity = 235/253 (92.89%), Postives = 242/253 (95.65%), Query Frame = 0


Query: 1   MADYHFVYKDVEGASTQWDDIQRKLGNLPPKPAPFKPPAFTPAQDGASVPKDKSWIDQKT 60
           M DYHFVYKDVEGASTQWDDIQRKLGNLPPKPAPFKPP FTPAQD ASV KDKSWIDQKT
Sbjct: 1   MGDYHFVYKDVEGASTQWDDIQRKLGNLPPKPAPFKPPGFTPAQDEASVSKDKSWIDQKT 60

Query: 61  EEELEDLEDDLDLDDDNFLEEYRKRRLEEIREAAKISKFGSINPISGSDFVREVSQAPSD 120
           EEELEDLEDDLDLDDDNFL+EYRK+RL EIREAAKISKFGS+NPISGSDFVREVSQAPSD
Sbjct: 61  EEELEDLEDDLDLDDDNFLQEYRKKRLVEIREAAKISKFGSVNPISGSDFVREVSQAPSD 120

Query: 121 VWVVVILYKAGIQECDVLMNCLQELAARYPATKFVKIISTDCIPNYPDCNLPTLLVYNNG 180
           VWVVVILYK GIQECDVLMNCLQELA RYPATKFVKIISTDCIPNYPDCNLPTLLVYNNG
Sbjct: 121 VWVVVILYKEGIQECDVLMNCLQELATRYPATKFVKIISTDCIPNYPDCNLPTLLVYNNG 180

Query: 181 AVKANYVGLRSFGRRCTPEGVALVLCQADPVLDDGQSGNDRSRTSVLEGVRRKIIEKVVR 240
           AVKANYVGLRSFGRRCTPEGVALVLCQADPVL+DGQSGND SR S+LEGVRRKIIEKVVR
Sbjct: 181 AVKANYVGLRSFGRRCTPEGVALVLCQADPVLNDGQSGNDESRKSMLEGVRRKIIEKVVR 240

Query: 241 EHEDENDDGNSSD 254
           +HED  DDG+SSD
Sbjct: 241 DHEDGIDDGSSSD 253

[Close]

BLAST of MS006325 vs. ExPASy TrEMBL
Match: A0A6J1IEW1 (phosducin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111472601 PE=3 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 7.0e-131
Identity = 235/253 (92.89%), Postives = 242/253 (95.65%), Query Frame = 0


Query: 1   MADYHFVYKDVEGASTQWDDIQRKLGNLPPKPAPFKPPAFTPAQDGASVPKDKSWIDQKT 60
           M DYHFVYKDVEGASTQWDDIQ KLGNLPPKPAPFKPPAFTPAQD ASV KDKSWIDQKT
Sbjct: 1   MGDYHFVYKDVEGASTQWDDIQTKLGNLPPKPAPFKPPAFTPAQDEASVSKDKSWIDQKT 60

Query: 61  EEELEDLEDDLDLDDDNFLEEYRKRRLEEIREAAKISKFGSINPISGSDFVREVSQAPSD 120
           EEELEDLEDDLDLDDDNFL+EYRK+RL EIREAAKISKFGS+NPISGSDFVREVSQAPSD
Sbjct: 61  EEELEDLEDDLDLDDDNFLQEYRKKRLVEIREAAKISKFGSVNPISGSDFVREVSQAPSD 120

Query: 121 VWVVVILYKAGIQECDVLMNCLQELAARYPATKFVKIISTDCIPNYPDCNLPTLLVYNNG 180
           VWVVVILYK GIQECDVLMNCLQELA RYPATKFVKIISTDCIPNYPDCNLPTLLVYNNG
Sbjct: 121 VWVVVILYKEGIQECDVLMNCLQELATRYPATKFVKIISTDCIPNYPDCNLPTLLVYNNG 180

Query: 181 AVKANYVGLRSFGRRCTPEGVALVLCQADPVLDDGQSGNDRSRTSVLEGVRRKIIEKVVR 240
           AVKANYVGLRSFGRRCTPEGVALVLCQADPVL+DGQSGND SR S+LEGVRRKIIEKVVR
Sbjct: 181 AVKANYVGLRSFGRRCTPEGVALVLCQADPVLNDGQSGNDESRKSMLEGVRRKIIEKVVR 240

Query: 241 EHEDENDDGNSSD 254
           +HED  DDG+SSD
Sbjct: 241 DHEDGIDDGSSSD 253

[Close]

BLAST of MS006325 vs. ExPASy TrEMBL
Match: A0A0A0LDG8 (Phosducin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G849940 PE=3 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 5.9e-130
Identity = 234/254 (92.13%), Postives = 244/254 (96.06%), Query Frame = 0


Query: 1   MADYHFVYKDVEGASTQWDDIQRKLGNLPPKPAPFKPPAFTPAQDGASVPKDKSWIDQKT 60
           M DYHF++KDVEGASTQWDDIQRKLGNLPPKPAPFKPPAFTPAQD ASVPKDKSWIDQK 
Sbjct: 1   MGDYHFIHKDVEGASTQWDDIQRKLGNLPPKPAPFKPPAFTPAQDDASVPKDKSWIDQKN 60

Query: 61  EEELEDLEDDLDLDDDNFLEEYRKRRLEEIREAAKISKFGSINPISGSDFVREVSQAPSD 120
           EEELEDLEDDLDLDDD+FL+EYRK+RL EIREAAKISKFGS+NPISGSDFVREVSQAPSD
Sbjct: 61  EEELEDLEDDLDLDDDSFLQEYRKKRLMEIREAAKISKFGSVNPISGSDFVREVSQAPSD 120

Query: 121 VWVVVILYKAGIQECDVLMNCLQELAARYPATKFVKIISTDCIPNYPDCNLPTLLVYNNG 180
           VWVVVILYK GIQECDVLMNCLQELAARYPATKFVKIISTDCIPNYPDCNLPTLLVYNNG
Sbjct: 121 VWVVVILYKEGIQECDVLMNCLQELAARYPATKFVKIISTDCIPNYPDCNLPTLLVYNNG 180

Query: 181 AVKANYVGLRSFGRRCTPEGVALVLCQADPVLDDGQSGN-DRSRTSVLEGVRRKIIEKVV 240
           AVKANYVGLRSFGRRCTPEGVALVLCQADPVL+DGQSGN D SR SVLE VRRKIIEKVV
Sbjct: 181 AVKANYVGLRSFGRRCTPEGVALVLCQADPVLNDGQSGNDDGSRQSVLESVRRKIIEKVV 240

Query: 241 REHEDENDDGNSSD 254
           R+HEDEND+G+ SD
Sbjct: 241 RDHEDENDEGSLSD 254

[Close]

BLAST of MS006325 vs. ExPASy TrEMBL
Match: A0A1S3CA51 (phosducin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103498690 PE=3 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 2.9e-129
Identity = 235/254 (92.52%), Postives = 242/254 (95.28%), Query Frame = 0


Query: 1   MADYHFVYKDVEGASTQWDDIQRKLGNLPPKPAPFKPPAFTPAQDGASVPKDKSWIDQKT 60
           M DYHFVYKDVEGASTQWDDIQRKLGNLPPKPAPFKPPAFTPA D ASV KDKSWIDQK 
Sbjct: 1   MGDYHFVYKDVEGASTQWDDIQRKLGNLPPKPAPFKPPAFTPALDEASVAKDKSWIDQKN 60

Query: 61  EEELEDLEDDLDLDDDNFLEEYRKRRLEEIREAAKISKFGSINPISGSDFVREVSQAPSD 120
           EEELEDLEDDLDLDDDNFL+EYRK+RL EIREAAKISKFGS+NPISGSDFVREVSQAPSD
Sbjct: 61  EEELEDLEDDLDLDDDNFLQEYRKKRLMEIREAAKISKFGSVNPISGSDFVREVSQAPSD 120

Query: 121 VWVVVILYKAGIQECDVLMNCLQELAARYPATKFVKIISTDCIPNYPDCNLPTLLVYNNG 180
           VWVVVILYK GIQECDVLMNCLQELAARYPATKFVKIISTDCIPNYPDCNLPTLLVYNNG
Sbjct: 121 VWVVVILYKEGIQECDVLMNCLQELAARYPATKFVKIISTDCIPNYPDCNLPTLLVYNNG 180

Query: 181 AVKANYVGLRSFGRRCTPEGVALVLCQADPVLDDGQSGN-DRSRTSVLEGVRRKIIEKVV 240
           AVKANYVGLRSFGRRCTPEGVALVLCQADPVL+DGQSGN D SR SVLE VRRKIIEKVV
Sbjct: 181 AVKANYVGLRSFGRRCTPEGVALVLCQADPVLNDGQSGNDDGSRKSVLESVRRKIIEKVV 240

Query: 241 REHEDENDDGNSSD 254
           R+HEDEND+G+ SD
Sbjct: 241 RDHEDENDNGSLSD 254

[Close]

BLAST of MS006325 vs. TAIR 10
Match: AT5G14240.1 (Thioredoxin superfamily protein )

HSP 1 Score: 385.2 bits (988), Expect = 4.1e-107
Identity = 181/251 (72.11%), Postives = 220/251 (87.65%), Query Frame = 0


Query: 1   MADYHFVYKDVEGASTQWDDIQRKLGNLPPKPAPFKPPAFTPAQDGASVPKDKSWIDQKT 60
           MADYHFVYKD+EGASTQWDDIQRKLGNLP K   FKPPA+TPA+D +S PKD++W D+KT
Sbjct: 1   MADYHFVYKDIEGASTQWDDIQRKLGNLPEKAPAFKPPAYTPAEDESSAPKDQAWFDKKT 60

Query: 61  EEELEDLEDDLDLDDDNFLEEYRKRRLEEIREAAKISKFGSINPISGSDFVREVSQAPSD 120
           EEELEDLEDD DLDDD FLEEYRK+RL E+REAAK+ ++G++ PISGSDFVREV+QA ++
Sbjct: 61  EEELEDLEDDKDLDDDRFLEEYRKKRLSELREAAKVKRYGTVTPISGSDFVREVTQASAE 120

Query: 121 VWVVVILYKAGIQECDVLMNCLQELAARYPATKFVKIISTDCIPNYPDCNLPTLLVYNNG 180
            WVVV LYK G+ EC +L+ CL EL +RYPATKFVKIISTDCIPNYPDCNLPTLLVY++G
Sbjct: 121 DWVVVCLYKDGVAECSLLLGCLDELGSRYPATKFVKIISTDCIPNYPDCNLPTLLVYHHG 180

Query: 181 AVKANYVGLRSFGRRCTPEGVALVLCQADPVLDDGQSG-NDRSRTSVLEGVRRKIIEKVV 240
           A+K  +VGL+SFGRRCTPE VAL+LCQ++PVL+DG+ G +D SR +V+ GVRR+ IE+VV
Sbjct: 181 AIKGTHVGLKSFGRRCTPESVALLLCQSEPVLNDGKGGDDDSSREAVMAGVRRQFIERVV 240

Query: 241 REHED-ENDDG 250
           ++HED +NDDG
Sbjct: 241 KDHEDKDNDDG 251

The following BLAST results are available for this feature:

BLAST of MS006325 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141847.1	1.5e-140	99.21	phosducin-like protein 3 [Momordica charantia] >XP_022141848.1 phosducin-like pr...	[more]
XP_022925476.1	8.5e-131	92.89	phosducin-like protein 3 isoform X1 [Cucurbita moschata]	[more]
XP_022973988.1	1.4e-130	92.89	phosducin-like protein 3 [Cucurbita maxima]	[more]
XP_023535516.1	1.4e-130	92.89	phosducin-like protein 3 [Cucurbita pepo subsp. pepo] >XP_023535517.1 phosducin-...	[more]
KAG7025184.1	2.5e-130	92.49	Viral IAP-associated factor-like protein [Cucurbita argyrosperma subsp. argyrosp...	[more]

BLAST of MS006325 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9H2J4	1.3e-33	37.29	Phosducin-like protein 3 OS=Homo sapiens OX=9606 GN=PDCL3 PE=1 SV=1	[more]
Q8MR62	8.5e-33	34.71	Viral IAP-associated factor homolog OS=Drosophila melanogaster OX=7227 GN=viaf P...	[more]
Q5RB77	3.2e-32	36.44	Phosducin-like protein 3 OS=Pongo abelii OX=9601 GN=PDCL3 PE=2 SV=1	[more]
Q6P268	5.5e-32	43.09	Phosducin-like protein 3 OS=Danio rerio OX=7955 GN=pdcl3 PE=2 SV=1	[more]
Q8BVF2	2.1e-31	41.76	Phosducin-like protein 3 OS=Mus musculus OX=10090 GN=Pdcl3 PE=1 SV=1	[more]

BLAST of MS006325 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CKG4	7.5e-141	99.21	phosducin-like protein 3 OS=Momordica charantia OX=3673 GN=LOC111012114 PE=3 SV=...	[more]
A0A6J1ECB4	4.1e-131	92.89	phosducin-like protein 3 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11143276...	[more]
A0A6J1IEW1	7.0e-131	92.89	phosducin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111472601 PE=3 SV=1	[more]
A0A0A0LDG8	5.9e-130	92.13	Phosducin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G849940 P...	[more]
A0A1S3CA51	2.9e-129	92.52	phosducin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103498690 PE=3 SV=1	[more]

BLAST of MS006325 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14240.1	4.1e-107	72.11	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 57..77
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 92..221 e-value: 7.7E-35 score: 121.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..56
None	No IPR available	PANTHER	PTHR45809	VIRAL IAP-ASSOCIATED FACTOR HOMOLOG	coord: 1..241
None	No IPR available	PANTHER	PTHR45809:SF7	THIOREDOXIN-LIKE FOLD PROTEIN-RELATED	coord: 1..241
None	No IPR available	CDD	cd02988	Phd_like_VIAF	coord: 16..208 e-value: 4.64505E-72 score: 216.748
IPR024253	Phosducin, thioredoxin-like domain	PFAM	PF02114	Phosducin	coord: 70..188 e-value: 3.0E-17 score: 62.5
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 16..207

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS006325.1	MS006325.1	mRNA