Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAGCCATGGAGTTTGGAGAGCTGAAGAGGAATTTTGAGGCTTTGAAGGATCTTGTTGAAAAGCAGGAGAGCAGAGTGCAGTACCATGAGAGCAGAGCCCAGAACATAACTATGGCCTACCTTATCTGGGGGCGGTTGTTCTTCTTTGCTATCTCTCAGACTTCTTCGTCCCTCCTCAAGTGTATTGATTGGTGGATGGTTTTGGGTTTGAGTGTTTCGTGTGCCTTCGTCTACTTTCTGTTTTTCCTGGAGGCTGTCACCATGTTATATCGGGTTCAGCACCAGATGGACATAATTTGCAAGGAACAGGCAGAAATTTGCCAGCAGATTTTGGTGGCCAGAAGCCAATTAGATGATGTGGATCTGGCAATGGAGGCTGGAGATTCAAGTGATGGGTTCCAGTTCAGTTTCCACGTGAAGTTACTTGAGTATGGTGCATTTAGAATTGTGGAGAGGAAATTTTACATATGCGCCACTGTCTCTGCTCTGCTTGCTGTTACTGCTATTGAACTATACGCCTGTAAGTTCTTGTTATGCAAC
mRNA sequence
ATAGCCATGGAGTTTGGAGAGCTGAAGAGGAATTTTGAGGCTTTGAAGGATCTTGTTGAAAAGCAGGAGAGCAGAGTGCAGTACCATGAGAGCAGAGCCCAGAACATAACTATGGCCTACCTTATCTGGGGGCGGTTGTTCTTCTTTGCTATCTCTCAGACTTCTTCGTCCCTCCTCAAGTGTATTGATTGGTGGATGGTTTTGGGTTTGAGTGTTTCGTGTGCCTTCGTCTACTTTCTGTTTTTCCTGGAGGCTGTCACCATGTTATATCGGGTTCAGCACCAGATGGACATAATTTGCAAGGAACAGGCAGAAATTTGCCAGCAGATTTTGGTGGCCAGAAGCCAATTAGATGATGTGGATCTGGCAATGGAGGCTGGAGATTCAAGTGATGGGTTCCAGTTCAGTTTCCACGTGAAGTTACTTGAGTATGGTGCATTTAGAATTGTGGAGAGGAAATTTTACATATGCGCCACTGTCTCTGCTCTGCTTGCTGTTACTGCTATTGAACTATACGCCTGTAAGTTCTTGTTATGCAAC
Coding sequence (CDS)
ATAGCCATGGAGTTTGGAGAGCTGAAGAGGAATTTTGAGGCTTTGAAGGATCTTGTTGAAAAGCAGGAGAGCAGAGTGCAGTACCATGAGAGCAGAGCCCAGAACATAACTATGGCCTACCTTATCTGGGGGCGGTTGTTCTTCTTTGCTATCTCTCAGACTTCTTCGTCCCTCCTCAAGTGTATTGATTGGTGGATGGTTTTGGGTTTGAGTGTTTCGTGTGCCTTCGTCTACTTTCTGTTTTTCCTGGAGGCTGTCACCATGTTATATCGGGTTCAGCACCAGATGGACATAATTTGCAAGGAACAGGCAGAAATTTGCCAGCAGATTTTGGTGGCCAGAAGCCAATTAGATGATGTGGATCTGGCAATGGAGGCTGGAGATTCAAGTGATGGGTTCCAGTTCAGTTTCCACGTGAAGTTACTTGAGTATGGTGCATTTAGAATTGTGGAGAGGAAATTTTACATATGCGCCACTGTCTCTGCTCTGCTTGCTGTTACTGCTATTGAACTATACGCCTGTAAGTTCTTGTTATGCAAC
Protein sequence
IAMEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCIDWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDLAMEAGDSSDGFQFSFHVKLLEYGAFRIVERKFYICATVSALLAVTAIELYACKFLLCN
Homology
BLAST of MS006240 vs. NCBI nr
Match:
XP_022157130.1 (uncharacterized protein LOC111023927 [Momordica charantia])
HSP 1 Score: 339.0 bits (868), Expect = 2.6e-89
Identity = 174/178 (97.75%), Postives = 176/178 (98.88%), Query Frame = 0
Query: 3 MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCI 62
MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCI
Sbjct: 1 MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCI 60
Query: 63 DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDL 122
DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDL
Sbjct: 61 DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDL 120
Query: 123 AMEAGDSSDGFQFSFHVKLLEYGAFRIVERKFYICATVSALLAVTAIELYACKFLLCN 181
AMEAGDSSDGFQFSFHVKLLEYGAFRIVERKFYICATVSALLAVTAIELYAC +L C+
Sbjct: 121 AMEAGDSSDGFQFSFHVKLLEYGAFRIVERKFYICATVSALLAVTAIELYACSWLYCD 178
BLAST of MS006240 vs. NCBI nr
Match:
XP_022157182.1 (uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncharacterized protein LOC111023958 [Momordica charantia])
HSP 1 Score: 212.6 bits (540), Expect = 2.8e-51
Identity = 113/178 (63.48%), Postives = 139/178 (78.09%), Query Frame = 0
Query: 3 MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCI 62
M GEL+R FE LKD+ EKQESRV+Y+E++ QNI YLI+ RLFFF ISQTSSS C
Sbjct: 1 MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSS-FNCK 60
Query: 63 DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDL 122
DWW++L LS+ C+F+YFL FL+AV ML+R Q+Q+DIICKE E+ QQILV+++Q DDV L
Sbjct: 61 DWWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQ-DDVGL 120
Query: 123 AMEAGDSSDGFQFSFHVKLLEYGAFRIVERKFYICATVSALLAVTAIELYACKFLLCN 181
+ME G+SS GF+F FH K+L FRIV RK YI TVSALLAVTAIELY K++LCN
Sbjct: 121 SMETGESSGGFEFGFHEKMLMLDHFRIVGRKVYIYFTVSALLAVTAIELYVSKYVLCN 176
BLAST of MS006240 vs. NCBI nr
Match:
XP_022157176.1 (uncharacterized protein LOC111023953 isoform X2 [Momordica charantia])
HSP 1 Score: 211.5 bits (537), Expect = 6.2e-51
Identity = 114/178 (64.04%), Postives = 135/178 (75.84%), Query Frame = 0
Query: 3 MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCI 62
M GEL+R F LKD+ EKQESRV+YHE++ Q I YLI RLFFF ISQTSSS KC
Sbjct: 1 MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSS--KCH 60
Query: 63 DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDL 122
DWW++L LS+ C+FVYFL FL+A T LY+ + Q+D+ICKE E+CQQILVA++Q DDVDL
Sbjct: 61 DWWVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQ-DDVDL 120
Query: 123 AMEAGDSSDGFQFSFHVKLLEYGAFRIVERKFYICATVSALLAVTAIELYACKFLLCN 181
AME GD SDGF+F FH K+L FR V RK YI TV AL+AVTAIELY K+LLCN
Sbjct: 121 AMEGGDFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 175
BLAST of MS006240 vs. NCBI nr
Match:
XP_022157172.1 (uncharacterized protein LOC111023951 [Momordica charantia])
HSP 1 Score: 198.7 bits (504), Expect = 4.1e-47
Identity = 115/175 (65.71%), Postives = 139/175 (79.43%), Query Frame = 0
Query: 3 MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCI 62
M+ LKR+FE LK L EKQE ++++ESRAQNITM YLIW R FFFA+SQTSS LKCI
Sbjct: 1 MKLRVLKRDFEELKLLAEKQEPILRFYESRAQNITMGYLIWERFFFFALSQTSSP-LKCI 60
Query: 63 DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDL 122
DW +VLGLS+ C+FVYFL FLEAVTMLYR Q+QMD+ICKEQ++ICQQIL A +Q DD
Sbjct: 61 DWRVVLGLSLVCSFVYFLLFLEAVTMLYRTQNQMDMICKEQSDICQQILDAGNQ-DDGGS 120
Query: 123 AMEAGDSSDG--FQFSFHVK-LLEYG-AFRIVERKFYICATVSALLAVTAIELYA 174
AMEAGD SDG F FSFH++ L Y +FRI ++K YI A +S+L+AVTA+ELYA
Sbjct: 121 AMEAGDLSDGVAFNFSFHMRTTLNYDYSFRIFQKKVYISAIISSLVAVTALELYA 173
BLAST of MS006240 vs. NCBI nr
Match:
KAA0042579.1 (WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK05983.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 180.3 bits (456), Expect = 1.5e-41
Identity = 98/182 (53.85%), Postives = 129/182 (70.88%), Query Frame = 0
Query: 1 IAMEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLK 60
I + G+L+RNF LKD+ + QE+ ++Y E++ QN+ + YL WGRLFFF +S + K
Sbjct: 43 IHFQLGDLRRNFVLLKDINDNQETSLRYCETKLQNVVLGYLSWGRLFFFGVSFS----FK 102
Query: 61 CIDWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDV 120
C DWW++L L++ F YFL F++AV ML R Q+DII KE AEICQQILVA++Q D+V
Sbjct: 103 CKDWWVILALTLFYTFFYFLLFMDAVIMLSRTHDQLDIIRKELAEICQQILVAQNQ-DNV 162
Query: 121 DLAMEAGDSSDGFQFSFHVKLLEYGAFRIVE--RKFYICATVSALLAVTAIELYACKFLL 180
L+MEAG+ SDGF+ SFH ++ FR+VE RK YI V LLA+TAIELYACK LL
Sbjct: 163 GLSMEAGEDSDGFELSFHERMFMLDQFRVVETGRKVYIYFIVCPLLAITAIELYACKCLL 219
BLAST of MS006240 vs. ExPASy TrEMBL
Match:
A0A6J1DS87 (uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023927 PE=4 SV=1)
HSP 1 Score: 339.0 bits (868), Expect = 1.2e-89
Identity = 174/178 (97.75%), Postives = 176/178 (98.88%), Query Frame = 0
Query: 3 MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCI 62
MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCI
Sbjct: 1 MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCI 60
Query: 63 DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDL 122
DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDL
Sbjct: 61 DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDL 120
Query: 123 AMEAGDSSDGFQFSFHVKLLEYGAFRIVERKFYICATVSALLAVTAIELYACKFLLCN 181
AMEAGDSSDGFQFSFHVKLLEYGAFRIVERKFYICATVSALLAVTAIELYAC +L C+
Sbjct: 121 AMEAGDSSDGFQFSFHVKLLEYGAFRIVERKFYICATVSALLAVTAIELYACSWLYCD 178
BLAST of MS006240 vs. ExPASy TrEMBL
Match:
A0A6J1DSQ0 (uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023958 PE=4 SV=1)
HSP 1 Score: 212.6 bits (540), Expect = 1.3e-51
Identity = 113/178 (63.48%), Postives = 139/178 (78.09%), Query Frame = 0
Query: 3 MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCI 62
M GEL+R FE LKD+ EKQESRV+Y+E++ QNI YLI+ RLFFF ISQTSSS C
Sbjct: 1 MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSS-FNCK 60
Query: 63 DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDL 122
DWW++L LS+ C+F+YFL FL+AV ML+R Q+Q+DIICKE E+ QQILV+++Q DDV L
Sbjct: 61 DWWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQ-DDVGL 120
Query: 123 AMEAGDSSDGFQFSFHVKLLEYGAFRIVERKFYICATVSALLAVTAIELYACKFLLCN 181
+ME G+SS GF+F FH K+L FRIV RK YI TVSALLAVTAIELY K++LCN
Sbjct: 121 SMETGESSGGFEFGFHEKMLMLDHFRIVGRKVYIYFTVSALLAVTAIELYVSKYVLCN 176
BLAST of MS006240 vs. ExPASy TrEMBL
Match:
A0A6J1DX74 (uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023953 PE=4 SV=1)
HSP 1 Score: 211.5 bits (537), Expect = 3.0e-51
Identity = 114/178 (64.04%), Postives = 135/178 (75.84%), Query Frame = 0
Query: 3 MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCI 62
M GEL+R F LKD+ EKQESRV+YHE++ Q I YLI RLFFF ISQTSSS KC
Sbjct: 1 MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSS--KCH 60
Query: 63 DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDL 122
DWW++L LS+ C+FVYFL FL+A T LY+ + Q+D+ICKE E+CQQILVA++Q DDVDL
Sbjct: 61 DWWVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQ-DDVDL 120
Query: 123 AMEAGDSSDGFQFSFHVKLLEYGAFRIVERKFYICATVSALLAVTAIELYACKFLLCN 181
AME GD SDGF+F FH K+L FR V RK YI TV AL+AVTAIELY K+LLCN
Sbjct: 121 AMEGGDFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 175
BLAST of MS006240 vs. ExPASy TrEMBL
Match:
A0A6J1DTV6 (uncharacterized protein LOC111023951 OS=Momordica charantia OX=3673 GN=LOC111023951 PE=4 SV=1)
HSP 1 Score: 198.7 bits (504), Expect = 2.0e-47
Identity = 115/175 (65.71%), Postives = 139/175 (79.43%), Query Frame = 0
Query: 3 MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCI 62
M+ LKR+FE LK L EKQE ++++ESRAQNITM YLIW R FFFA+SQTSS LKCI
Sbjct: 1 MKLRVLKRDFEELKLLAEKQEPILRFYESRAQNITMGYLIWERFFFFALSQTSSP-LKCI 60
Query: 63 DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDL 122
DW +VLGLS+ C+FVYFL FLEAVTMLYR Q+QMD+ICKEQ++ICQQIL A +Q DD
Sbjct: 61 DWRVVLGLSLVCSFVYFLLFLEAVTMLYRTQNQMDMICKEQSDICQQILDAGNQ-DDGGS 120
Query: 123 AMEAGDSSDG--FQFSFHVK-LLEYG-AFRIVERKFYICATVSALLAVTAIELYA 174
AMEAGD SDG F FSFH++ L Y +FRI ++K YI A +S+L+AVTA+ELYA
Sbjct: 121 AMEAGDLSDGVAFNFSFHMRTTLNYDYSFRIFQKKVYISAIISSLVAVTALELYA 173
BLAST of MS006240 vs. ExPASy TrEMBL
Match:
A0A5A7TMJ1 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00790 PE=4 SV=1)
HSP 1 Score: 180.3 bits (456), Expect = 7.4e-42
Identity = 98/182 (53.85%), Postives = 129/182 (70.88%), Query Frame = 0
Query: 1 IAMEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLK 60
I + G+L+RNF LKD+ + QE+ ++Y E++ QN+ + YL WGRLFFF +S + K
Sbjct: 43 IHFQLGDLRRNFVLLKDINDNQETSLRYCETKLQNVVLGYLSWGRLFFFGVSFS----FK 102
Query: 61 CIDWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDV 120
C DWW++L L++ F YFL F++AV ML R Q+DII KE AEICQQILVA++Q D+V
Sbjct: 103 CKDWWVILALTLFYTFFYFLLFMDAVIMLSRTHDQLDIIRKELAEICQQILVAQNQ-DNV 162
Query: 121 DLAMEAGDSSDGFQFSFHVKLLEYGAFRIVE--RKFYICATVSALLAVTAIELYACKFLL 180
L+MEAG+ SDGF+ SFH ++ FR+VE RK YI V LLA+TAIELYACK LL
Sbjct: 163 GLSMEAGEDSDGFELSFHERMFMLDQFRVVETGRKVYIYFIVCPLLAITAIELYACKCLL 219
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022157130.1 | 2.6e-89 | 97.75 | uncharacterized protein LOC111023927 [Momordica charantia] | [more] |
XP_022157182.1 | 2.8e-51 | 63.48 | uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncha... | [more] |
XP_022157176.1 | 6.2e-51 | 64.04 | uncharacterized protein LOC111023953 isoform X2 [Momordica charantia] | [more] |
XP_022157172.1 | 4.1e-47 | 65.71 | uncharacterized protein LOC111023951 [Momordica charantia] | [more] |
KAA0042579.1 | 1.5e-41 | 53.85 | WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK0598... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DS87 | 1.2e-89 | 97.75 | uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1DSQ0 | 1.3e-51 | 63.48 | uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1DX74 | 3.0e-51 | 64.04 | uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1DTV6 | 2.0e-47 | 65.71 | uncharacterized protein LOC111023951 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A5A7TMJ1 | 7.4e-42 | 53.85 | WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194... | [more] |
Match Name | E-value | Identity | Description | |